ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf80i04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK069830:Os02g0800100 | 248 | 6e-66 | 2 | Os09g0314900:Os09g0314900 | 219 | 2e-57 | 3 | Os03g0583700:Os03g0583700 | 217 | 1e-56 | 4 | Os02g0801300:Os02g0801300 | 184 | 1e-46 | 5 | AK065174: | 31 | 1.2 | 6 | AK122179:Os04g0484900 | 30 | 3.4 | 7 | AK121283:Os04g0538700 | 29 | 4.4 | 8 | AK105628:Os04g0538700 | 29 | 4.4 | 9 | AK108043:Os03g0292600 | 29 | 4.4 | 10 | Os01g0113500:Os01g0113500 | 28 | 7.6 | 11 | AK109487:Os01g0265800 | 28 | 9.9 | 12 | AK099896:Os01g0265800 | 28 | 9.9 | 13 | AK072234:Os07g0657300 | 28 | 9.9 | 14 | AK070608:Os09g0569400 | 28 | 9.9 | 15 | AK063384:Os09g0569400 | 28 | 9.9 |
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>AK069830:Os02g0800100 | Length = 141 Score = 248 bits (632), Expect = 6e-66 Identities = 113/132 (85%), Positives = 125/132 (94%) Frame = +1 Query: 94 ELGETHDVLRFGVNDSVRGDLAPAHPVQAAIHKESKFWDDKKKFGTEAIYGSAFNIRKDL 273 E+G HDVLRFGVNDSV+GDLAP HP+QA++HK++KFW DKK+FG EAIYGSAFNIRKDL Sbjct: 10 EIGGNHDVLRFGVNDSVKGDLAPPHPLQASVHKDAKFWADKKRFGAEAIYGSAFNIRKDL 69 Query: 274 DAQILSRFQRPPGALPSSMLGYEAMTGSLDDFGFEDYLNLPQDSDSLRVPDMHHGMEVRL 453 DAQILS+FQRPPGALPSSMLGYEA+TGSLDDFGFEDYLNLPQDS+S R PDMHHGMEVRL Sbjct: 70 DAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNLPQDSESFRAPDMHHGMEVRL 129 Query: 454 GLSKGPICPSFN 489 GLSKGP+CPSFN Sbjct: 130 GLSKGPVCPSFN 141
>Os09g0314900:Os09g0314900 | Length = 280 Score = 219 bits (558), Expect = 2e-57 Identities = 103/131 (78%), Positives = 114/131 (87%) Frame = +1 Query: 94 ELGETHDVLRFGVNDSVRGDLAPAHPVQAAIHKESKFWDDKKKFGTEAIYGSAFNIRKDL 273 E+GE HDVLRFG N+SV+GDLAP HP+QA +HKE+KFW DKK+FG EAIYGSAFNIRKDL Sbjct: 10 EVGENHDVLRFGFNNSVKGDLAPQHPIQATVHKEAKFWADKKRFGAEAIYGSAFNIRKDL 69 Query: 274 DAQILSRFQRPPGALPSSMLGYEAMTGSLDDFGFEDYLNLPQDSDSLRVPDMHHGMEVRL 453 DAQILS+FQRPPGALPSSMLGYEA+TGSLDDFGFEDYLNLPQDSDS PDMHHGMEV L Sbjct: 70 DAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNLPQDSDSFHAPDMHHGMEVLL 129 Query: 454 GLSKGPICPSF 486 + IC + Sbjct: 130 EIG---ICKKY 137
>Os03g0583700:Os03g0583700 | Length = 281 Score = 217 bits (552), Expect = 1e-56 Identities = 101/127 (79%), Positives = 114/127 (89%), Gaps = 3/127 (2%) Frame = +1 Query: 94 ELGETHDVLRFGVNDSVRGDLAPAHPVQAAIHKESKFWDDKKKFGTEAIYGSAFNIRKDL 273 E+GE HDVL FGVN+SV+GDLAP HP+QA +HKE+KFW DKK+FG EAIYGSAFNIRKDL Sbjct: 10 EVGENHDVLLFGVNNSVKGDLAPQHPIQATVHKEAKFWADKKRFGAEAIYGSAFNIRKDL 69 Query: 274 DAQILSRFQRPPGALPSSMLGYEAMTGSLDDFGFEDYLNLPQDSDSLRVPDMHHGME--- 444 DAQILS+FQRPPGALPSSMLGYEA+TGSLDDFGFEDYLNLPQDSDS PDMHHGME Sbjct: 70 DAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNLPQDSDSFHAPDMHHGMEKNL 129 Query: 445 VRLGLSK 465 +++G+ K Sbjct: 130 LKIGICK 136
>Os02g0801300:Os02g0801300 | Length = 391 Score = 184 bits (466), Expect = 1e-46 Identities = 85/105 (80%), Positives = 96/105 (91%) Frame = +1 Query: 94 ELGETHDVLRFGVNDSVRGDLAPAHPVQAAIHKESKFWDDKKKFGTEAIYGSAFNIRKDL 273 E+G HDV+RFGVNDSV+GDLAP HP+QA++HKE+KFW DKK+FG EAIYGSAFNIRKDL Sbjct: 10 EIGGNHDVVRFGVNDSVKGDLAPPHPLQASVHKEAKFWADKKRFGAEAIYGSAFNIRKDL 69 Query: 274 DAQILSRFQRPPGALPSSMLGYEAMTGSLDDFGFEDYLNLPQDSD 408 DAQILS+FQRPPGALPSSMLGYEA+TGSLDDFGFEDYLN S+ Sbjct: 70 DAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASE 114
>AK065174: | Length = 610 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Frame = -3 Query: 503 HGWNQLKLGQMGPLDRPRRTSIPWCMSGTRRLSE--SWGKLR*SSNPKS-SKEPVIASYP 333 HGWN Q LDR ++T C + + W K S++P K ++S P Sbjct: 316 HGWNTTAAAQKADLDRLKKTLASMCFKPYSKKGDIAVWQK---STDPACYDKLTPVSSPP 372 Query: 332 SIDDGNAPGGLW 297 DD P W Sbjct: 373 KCDDSVDPDAAW 384
>AK122179:Os04g0484900 | Length = 573 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -3 Query: 806 ELPYSSRLETGYEPTG-RSIGLAYNTFLQLEISIFQVCR 693 + YS++ TGYEPT R+I YN ++Q I Q+ R Sbjct: 145 DFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKR 183
>AK121283:Os04g0538700 | Length = 520 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 182 AAWTGCAGARSPRTLSLTPKRSTSWVSPS 96 A+ TG G+ P+ LS P+R SW +P+ Sbjct: 241 ASLTGATGSAFPQALSNQPQRPHSWATPA 269
>AK105628:Os04g0538700 | Length = 520 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 182 AAWTGCAGARSPRTLSLTPKRSTSWVSPS 96 A+ TG G+ P+ LS P+R SW +P+ Sbjct: 241 ASLTGATGSAFPQALSNQPQRPHSWATPA 269
>AK108043:Os03g0292600 | Length = 158 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 374 LKITLTCPKTLTACAYRTCTTGWRFALACPRDPSAPVS 487 L +T C T+C YR+ R PR PS P++ Sbjct: 90 LPLTSPCTTPATSCRYRSAAATRRTTPRAPRSPSPPMA 127
>Os01g0113500:Os01g0113500 | Length = 1369 Score = 28.5 bits (62), Expect = 7.6 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = +1 Query: 310 GALPSSMLGYEAMTGSLDDF---GFEDYLNLPQDSDSLRVPDMHHGMEVRLGLSKGPICP 480 G P ++ + S+ DF D N+P D + P+ HG SKGP CP Sbjct: 674 GKPPQTLAEFTVDQTSVQDFFDISLTDGFNVPMDFLPVPAPEQRHGAP---PCSKGPRCP 730 Query: 481 S 483 + Sbjct: 731 A 731
>AK109487:Os01g0265800 | Length = 490 Score = 28.1 bits (61), Expect = 9.9 Identities = 26/90 (28%), Positives = 39/90 (43%) Frame = +1 Query: 154 LAPAHPVQAAIHKESKFWDDKKKFGTEAIYGSAFNIRKDLDAQILSRFQRPPGALPSSML 333 +APA P Q A+ S++ K I+ S N+ D+D Q L +F G + L Sbjct: 249 VAPA-PAQLALPPVSEYTQRK-------IFVS--NVGADIDPQKLLQFFSKYGEIEEGPL 298 Query: 334 GYEAMTGSLDDFGFEDYLNLPQDSDSLRVP 423 G + +TG F Y L +L+ P Sbjct: 299 GLDKVTGKPKGFALFVYKTLDSAKKALQEP 328
>AK099896:Os01g0265800 | Length = 490 Score = 28.1 bits (61), Expect = 9.9 Identities = 26/90 (28%), Positives = 39/90 (43%) Frame = +1 Query: 154 LAPAHPVQAAIHKESKFWDDKKKFGTEAIYGSAFNIRKDLDAQILSRFQRPPGALPSSML 333 +APA P Q A+ S++ K I+ S N+ D+D Q L +F G + L Sbjct: 249 VAPA-PAQLALPPVSEYTQRK-------IFVS--NVGADIDPQKLLQFFSKYGEIEEGPL 298 Query: 334 GYEAMTGSLDDFGFEDYLNLPQDSDSLRVP 423 G + +TG F Y L +L+ P Sbjct: 299 GLDKVTGKPKGFALFVYKTLDSAKKALQEP 328
>AK072234:Os07g0657300 | Length = 264 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = -1 Query: 736 ILSYSSRSAFSKSVDPETEDNKE----INTSPKTENSDITIDVKEFKLMRYPFSSHVSQI 569 ILS S+ +A + D +T N I TSP+ + +DV+ + + +P H + Sbjct: 139 ILSSSTAAAVAFPDDDDTSWNDALAECIRTSPRAKQMSARVDVRSQQRLSFPMPEHGAAA 198 Query: 568 HDTA 557 TA Sbjct: 199 TSTA 202
>AK070608:Os09g0569400 | Length = 738 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Frame = +1 Query: 304 PPGALPSSMLGYEAMTGSLDDFGF----EDYLNLPQDSDSLRVPDMHHGMEVRL 453 PP + + M + T DDFG EDYL ++ D+ +P GM+ L Sbjct: 459 PPSSSVAPMFPFFENTSEWDDFGEVINPEDYLMKQEEMDNTLMPGAGDGMDSML 512
>AK063384:Os09g0569400 | Length = 738 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Frame = +1 Query: 304 PPGALPSSMLGYEAMTGSLDDFGF----EDYLNLPQDSDSLRVPDMHHGMEVRL 453 PP + + M + T DDFG EDYL ++ D+ +P GM+ L Sbjct: 459 PPSSSVAPMFPFFENTSEWDDFGEVINPEDYLMKQEEMDNTLMPGAGDGMDSML 512 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,675,071 Number of extensions: 595079 Number of successful extensions: 1899 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1899 Number of HSP's successfully gapped: 15 Length of query: 327 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 226 Effective length of database: 11,355,714 Effective search space: 2566391364 Effective search space used: 2566391364 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
