ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf80i04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828693.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA034B20, full insert sequence Length = 644 Score = 402 bits (203), Expect = e-109 Identities = 376/433 (86%), Gaps = 3/433 (0%) Strand = Plus / Plus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 53 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 109 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 110 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 169 Query: 182 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 241 | |||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 170 gcgtccacaaggatgccaagttctgggcggacaagaagaggttcggcgcggaagccatct 229 Query: 242 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 301 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 230 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 289 Query: 302 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 361 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 290 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 349 Query: 362 atgattttggatttgaagattaccttaacttgccccaagactctgacagcctgcgcgtac 421 |||||||||| ||||||||||| ||||||||||||||||| ||||| ||| | || | | Sbjct: 350 atgattttgggtttgaagattatcttaacttgccccaagattctgaaagcttccgtgctc 409 Query: 422 cggacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgcccca 481 | |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| | Sbjct: 410 ccgacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgcccta 469 Query: 482 gtttcaattgatt 494 ||||||||||||| Sbjct: 470 gtttcaattgatt 482
>dbj|AK240888.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065029H23, full insert sequence Length = 2872 Score = 402 bits (203), Expect = e-109 Identities = 376/433 (86%), Gaps = 3/433 (0%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 735 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 679 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 678 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 619 Query: 182 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 241 | |||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 618 gcgtccacaaggatgccaagttctgggcggacaagaagaggttcggcgcggaagccatct 559 Query: 242 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 301 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 558 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 499 Query: 302 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 361 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 498 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 439 Query: 362 atgattttggatttgaagattaccttaacttgccccaagactctgacagcctgcgcgtac 421 |||||||||| ||||||||||| ||||||||||||||||| ||||| ||| | || | | Sbjct: 438 atgattttgggtttgaagattatcttaacttgccccaagattctgaaagcttccgtgctc 379 Query: 422 cggacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgcccca 481 | |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| | Sbjct: 378 ccgacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgcccta 319 Query: 482 gtttcaattgatt 494 ||||||||||||| Sbjct: 318 gtttcaattgatt 306
>ref|NM_001054948.1| Oryza sativa (japonica cultivar-group) Os02g0800100 (Os02g0800100) mRNA, complete cds Length = 777 Score = 402 bits (203), Expect = e-109 Identities = 376/433 (86%), Gaps = 3/433 (0%) Strand = Plus / Plus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 64 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 120 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 121 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 180 Query: 182 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 241 | |||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 181 gcgtccacaaggatgccaagttctgggcggacaagaagaggttcggcgcggaagccatct 240 Query: 242 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 301 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 241 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 300 Query: 302 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 361 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 301 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 360 Query: 362 atgattttggatttgaagattaccttaacttgccccaagactctgacagcctgcgcgtac 421 |||||||||| ||||||||||| ||||||||||||||||| ||||| ||| | || | | Sbjct: 361 atgattttgggtttgaagattatcttaacttgccccaagattctgaaagcttccgtgctc 420 Query: 422 cggacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgcccca 481 | |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| | Sbjct: 421 ccgacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgcccta 480 Query: 482 gtttcaattgatt 494 ||||||||||||| Sbjct: 481 gtttcaattgatt 493
>dbj|AK069830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030M09, full insert sequence Length = 778 Score = 402 bits (203), Expect = e-109 Identities = 376/433 (86%), Gaps = 3/433 (0%) Strand = Plus / Plus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 65 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 121 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 122 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 181 Query: 182 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 241 | |||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 182 gcgtccacaaggatgccaagttctgggcggacaagaagaggttcggcgcggaagccatct 241 Query: 242 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 301 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 242 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 301 Query: 302 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 361 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 302 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 361 Query: 362 atgattttggatttgaagattaccttaacttgccccaagactctgacagcctgcgcgtac 421 |||||||||| ||||||||||| ||||||||||||||||| ||||| ||| | || | | Sbjct: 362 atgattttgggtttgaagattatcttaacttgccccaagattctgaaagcttccgtgctc 421 Query: 422 cggacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgcccca 481 | |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| | Sbjct: 422 ccgacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgcccta 481 Query: 482 gtttcaattgatt 494 ||||||||||||| Sbjct: 482 gtttcaattgatt 494
>ref|NM_001069377.1| Oryza sativa (japonica cultivar-group) Os09g0314900 (Os09g0314900) mRNA, complete cds Length = 843 Score = 373 bits (188), Expect = e-100 Identities = 323/368 (87%) Strand = Plus / Plus Query: 87 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 146 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 21 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 80 Query: 147 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaaggagtccaagttctg 206 ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||||| Sbjct: 81 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaaggaggccaagttctg 140 Query: 207 ggacgacaagaagaagttcgggaccgaggccatctacggatccgccttcaacatccgcaa 266 || || ||||||| ||||||| | || ||||||||||||||||| |||||||||||||| Sbjct: 141 ggcggataagaagaggttcggggcggaagccatctacggatccgctttcaacatccgcaa 200 Query: 267 ggatctcgacgcccagatcctctccaggttccaaaggcccccaggtgcattgccatcatc 326 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 201 ggatctcgatgcccaaatcctctccaagttccaaaggccccctggtgcattgccatcatc 260 Query: 327 tatgctgggatatgaggcaatgacaggttccttggatgattttggatttgaagattacct 386 |||||| ||||| ||||| |||| ||||||||||||||||| || ||||||||||| || Sbjct: 261 tatgctaggatacgaggcgctgactggttccttggatgatttcgggtttgaagattatct 320 Query: 387 taacttgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggaggt 446 |||||||||||||| ||||||||| | | | || |||||||||||||| |||||||| Sbjct: 321 caacttgccccaagattctgacagcttccatgctccagacatgcaccacggaatggaggt 380 Query: 447 tcgccttg 454 || ||||| Sbjct: 381 tctccttg 388
>ref|NM_001057097.1| Oryza sativa (japonica cultivar-group) Os03g0583700 (Os03g0583700) mRNA, complete cds Length = 846 Score = 361 bits (182), Expect = 3e-96 Identities = 314/358 (87%) Strand = Plus / Plus Query: 87 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 146 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 21 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 80 Query: 147 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaaggagtccaagttctg 206 ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||||| Sbjct: 81 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaaggaggccaagttctg 140 Query: 207 ggacgacaagaagaagttcgggaccgaggccatctacggatccgccttcaacatccgcaa 266 || || ||||||| ||||||| | || ||||||||||||||||| |||||||||||||| Sbjct: 141 ggcggataagaagaggttcggggcggaagccatctacggatccgctttcaacatccgcaa 200 Query: 267 ggatctcgacgcccagatcctctccaggttccaaaggcccccaggtgcattgccatcatc 326 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 201 ggatctcgatgcccaaatcctctccaagttccaaaggccccctggtgcattgccatcatc 260 Query: 327 tatgctgggatatgaggcaatgacaggttccttggatgattttggatttgaagattacct 386 |||||| ||||| ||||| |||| ||||||||||||||||| || ||||||||||| || Sbjct: 261 tatgctaggatacgaggcgctgactggttccttggatgatttcgggtttgaagattatct 320 Query: 387 taacttgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggag 444 |||||||||||||| ||||||||| | | | || |||||||||||||| |||||| Sbjct: 321 caacttgccccaagattctgacagcttccatgctccagacatgcaccacggaatggag 378
>ref|NM_001054951.1| Oryza sativa (japonica cultivar-group) Os02g0800500 (Os02g0800500) mRNA, partial cds Length = 3230 Score = 333 bits (168), Expect = 7e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 45 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 101 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 102 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 161 Query: 182 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 241 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 162 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 221 Query: 242 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 301 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 222 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 281 Query: 302 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 361 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 282 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 341 Query: 362 atgattttggatttgaagattaccttaact 391 |||||||||| ||||||||||| ||||||| Sbjct: 342 atgattttgggtttgaagattatcttaact 371
>dbj|AK072342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N08, full insert sequence Length = 3232 Score = 333 bits (168), Expect = 7e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 47 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 103 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 104 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 163 Query: 182 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 241 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 164 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 223 Query: 242 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 301 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 224 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 283 Query: 302 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 361 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 284 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 343 Query: 362 atgattttggatttgaagattaccttaact 391 |||||||||| ||||||||||| ||||||| Sbjct: 344 atgattttgggtttgaagattatcttaact 373
>dbj|AK072332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L20, full insert sequence Length = 4792 Score = 333 bits (168), Expect = 7e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 33 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 89 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 90 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 149 Query: 182 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 241 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 150 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 209 Query: 242 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 301 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 210 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 269 Query: 302 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 361 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 270 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 329 Query: 362 atgattttggatttgaagattaccttaact 391 |||||||||| ||||||||||| ||||||| Sbjct: 330 atgattttgggtttgaagattatcttaact 359
>dbj|AK067815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118P06, full insert sequence Length = 3020 Score = 333 bits (168), Expect = 7e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 32 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 88 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 89 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 148 Query: 182 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 241 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 149 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 208 Query: 242 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 301 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 209 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 268 Query: 302 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 361 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 269 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 328 Query: 362 atgattttggatttgaagattaccttaact 391 |||||||||| ||||||||||| ||||||| Sbjct: 329 atgattttgggtttgaagattatcttaact 358
>ref|NM_001054952.1| Oryza sativa (japonica cultivar-group) Os02g0801300 (Os02g0801300) mRNA, complete cds Length = 1176 Score = 329 bits (166), Expect = 1e-86 Identities = 288/328 (87%), Gaps = 3/328 (0%) Strand = Plus / Plus Query: 64 atggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctccgc 123 |||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||||| Sbjct: 1 atggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtccgc 57 Query: 124 ttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccgcc 183 ||||||||||||||||||||| || |||||||||||| ||||||| |||||||| | Sbjct: 58 ttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggccagc 117 Query: 184 atccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctac 243 ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||||| Sbjct: 118 gtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctac 177 Query: 244 ggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaagg 303 ||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||||| Sbjct: 178 ggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaagg 237 Query: 304 cccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttggat 363 ||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| ||| Sbjct: 238 ccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttagat 297 Query: 364 gattttggatttgaagattaccttaact 391 |||||||| ||||||||||| ||||||| Sbjct: 298 gattttgggtttgaagattatcttaact 325
>gb|AY105712.1| Zea mays PCO130616 mRNA sequence Length = 981 Score = 329 bits (166), Expect = 1e-86 Identities = 346/406 (85%) Strand = Plus / Plus Query: 87 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 146 ||||| |||| || |||||||||||||| |||||||||||| |||| | | ||||| Sbjct: 105 gaagagggagatcagcgagacccacgacaccctccgcttcggcctcaatgccggcgtcaa 164 Query: 147 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaaggagtccaagttctg 206 | ||||||||||||| ||||||| ||||| || |||||| |||| |||||||||| Sbjct: 165 ggccgacctcgcgccgccgcacccgctccagtccagcatccaatcggaggccaagttctg 224 Query: 207 ggacgacaagaagaagttcgggaccgaggccatctacggatccgccttcaacatccgcaa 266 || |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 225 ggcggacaagaagaagtttgggacagaggccatctacggatccgccttgaacatccgcaa 284 Query: 267 ggatctcgacgcccagatcctctccaggttccaaaggcccccaggtgcattgccatcatc 326 ||||||||| ||||| |||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 285 ggatctcgatgcccaaatcctctcaaggttccaaaggccccctggtgctttgccatcatc 344 Query: 327 tatgctgggatatgaggcaatgacaggttccttggatgattttggatttgaagattacct 386 | |||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||| || Sbjct: 345 tctgcttggatatgaggcactgacaggttccctagatgattttggttttgaagattatct 404 Query: 387 taacttgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggaggt 446 |||| |||| ||||| ||||| | | || ||| |||||||||||||| |||||||| Sbjct: 405 taacatgcctcaagattctgaaggtttccgtcaacctgacatgcaccacggaatggaggt 464 Query: 447 tcgccttggcctgtccaagggacccatctgccccagtttcaattga 492 ||||||||| ||||||||||||| |||||||| || |||| |||| Sbjct: 465 tcgccttggtttgtccaagggacctatctgccctagcttcagttga 510
>gb|BT016426.1| Zea mays clone Contig259 mRNA sequence Length = 643 Score = 301 bits (152), Expect = 2e-78 Identities = 317/372 (85%) Strand = Plus / Plus Query: 121 cgcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggcc 180 ||||||||| |||||| | ||||| | ||||||||| ||| ||||||| ||||| | Sbjct: 117 cgcttcggcatcaacgccggcgtcaaagccgacctcgccccgccgcacccgctccagtct 176 Query: 181 gccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatc 240 ||||||| |||| |||||||||||| |||||||||||||||||||| || ||||| Sbjct: 177 accatccaatcggagaccaagttctgggcggacaagaagaagttcgggacagatgccata 236 Query: 241 tacggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaa 300 || ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 237 tatggatccgccctcaacatccgcaaggatctcgatgcccaaatcctctccaggttccaa 296 Query: 301 aggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttg 360 |||||||| ||||| ||||| |||||| |||| ||||| |||||| ||||||||||| || Sbjct: 297 aggccccctggtgctttgccgtcatctctgcttggatacgaggcactgacaggttccctg 356 Query: 361 gatgattttggatttgaagattaccttaacttgccccaagactctgacagcctgcgcgta 420 ||||||||||||||||||||||| |||||| |||| || || |||||||| | || | Sbjct: 357 gatgattttggatttgaagattatcttaacatgcctcatgattctgacagtttccgtcaa 416 Query: 421 ccggacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgcccc 480 || ||||||||||| || ||||||||||||||||| ||||||||||||| ||||| || Sbjct: 417 cctgacatgcaccatggaatggaggttcgccttggtttgtccaagggacctatctgtcct 476 Query: 481 agtttcaattga 492 || ||||||||| Sbjct: 477 agcttcaattga 488
>gb|AY104566.1| Zea mays PCO130617 mRNA sequence Length = 1029 Score = 297 bits (150), Expect = 4e-77 Identities = 264/302 (87%) Strand = Plus / Plus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| |||||||||||||||||||| || ||||| || ||||||| Sbjct: 476 aggagaccaagttctgggcggacaagaagaagttcgggacagatgccatatatggatccg 535 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaaggcccccag 310 || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 536 ccctcaacatccgcaaggatctcgatgcccaaatcctctccaggttccaaaggccccctg 595 Query: 311 gtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttggatgattttg 370 |||| ||||| |||||| |||| ||||| |||||| ||||||||||| |||||||||||| Sbjct: 596 gtgctttgccgtcatctctgcttggatacgaggcactgacaggttccctggatgattttg 655 Query: 371 gatttgaagattaccttaacttgccccaagactctgacagcctgcgcgtaccggacatgc 430 ||||||||||||| |||||| |||| || || |||||||| | || ||| ||||||| Sbjct: 656 gatttgaagattatcttaacatgcctcatgattctgacagtttccgtcaacctgacatgc 715 Query: 431 accacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttcaatt 490 |||| || ||||||||||||||||| ||||||||||||| ||||| || || ||||||| Sbjct: 716 accatggaatggaggttcgccttggtttgtccaagggacctatctgtcctagcttcaatt 775 Query: 491 ga 492 || Sbjct: 776 ga 777
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 290 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 349 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34095511 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34095452 Query: 350 caggttccttggatgattttggatttgaagattaccttaact 391 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 34095451 ctggttccttagatgattttgggtttgaagattatcttaact 34095410 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 290 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 349 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34118698 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34118639 Query: 350 caggttccttggatgattttggatttgaagattaccttaact 391 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 34118638 ctggttccttagatgattttgggtttgaagattatcttaact 34118597 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 290 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 349 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34143250 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34143191 Query: 350 caggttccttggatgattttggatttgaagattaccttaact 391 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 34143190 ctggttccttagatgattttgggtttgaagattatcttaact 34143149 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 290 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 349 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34172967 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34172908 Query: 350 caggttccttggatgattttggatttgaagattaccttaact 391 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 34172907 ctggttccttagatgattttgggtttgaagattatcttaact 34172866 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 34119552 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 34119493 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 34119492 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 34119451 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 34144104 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 34144045 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 34144044 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 34144003 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 34173821 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 34173762 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 34173761 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 34173720 Score = 111 bits (56), Expect = 5e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 197 ccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccgccttca 256 |||||||||||| |||||||||| |||||| | || |||||||||||||||||||||| Sbjct: 34096372 ccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttca 34096313 Query: 257 acatccgcaaggatctcgacgcccagatcctctcca 292 |||||||||||||||| || ||||| |||||||||| Sbjct: 34096312 acatccgcaaggatcttgatgcccaaatcctctcca 34096277 Score = 107 bits (54), Expect = 8e-20 Identities = 113/132 (85%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 34096586 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 34096530 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34096529 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34096470 Query: 182 ccatccacaagg 193 | ||||||||| Sbjct: 34096469 gcgtccacaagg 34096458 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 34119776 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 34119720 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34119719 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34119660 Query: 182 ccatccacaagg 193 | ||||||||| Sbjct: 34119659 gcgtccacaagg 34119648 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 34144325 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 34144269 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34144268 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34144209 Query: 182 ccatccacaagg 193 | ||||||||| Sbjct: 34144208 gcgtccacaagg 34144197 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 34174042 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 34173986 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34173985 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34173926 Query: 182 ccatccacaagg 193 | ||||||||| Sbjct: 34173925 gcgtccacaagg 34173914 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 424 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 483 |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| ||| Sbjct: 34094685 gacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgccctagt 34094626 Query: 484 ttcaattgatt 494 ||||||||||| Sbjct: 34094625 ttcaattgatt 34094615 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 cctcgcgccggcgcaccccgt 173 ||||||||||||||||||||| Sbjct: 33056861 cctcgcgccggcgcaccccgt 33056841
>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0032L17 Length = 165808 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 290 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 349 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 23025 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 22966 Query: 350 caggttccttggatgattttggatttgaagattaccttaact 391 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 22965 ctggttccttagatgattttgggtttgaagattatcttaact 22924 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 290 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 349 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 46212 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 46153 Query: 350 caggttccttggatgattttggatttgaagattaccttaact 391 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 46152 ctggttccttagatgattttgggtttgaagattatcttaact 46111 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 290 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 349 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 70764 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 70705 Query: 350 caggttccttggatgattttggatttgaagattaccttaact 391 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 70704 ctggttccttagatgattttgggtttgaagattatcttaact 70663 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 290 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 349 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 100481 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 100422 Query: 350 caggttccttggatgattttggatttgaagattaccttaact 391 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 100421 ctggttccttagatgattttgggtttgaagattatcttaact 100380 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 47066 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 47007 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 47006 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 46965 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 71618 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 71559 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 71558 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 71517 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 101335 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 101276 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 101275 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 101234 Score = 111 bits (56), Expect = 5e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 197 ccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccgccttca 256 |||||||||||| |||||||||| |||||| | || |||||||||||||||||||||| Sbjct: 23886 ccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttca 23827 Query: 257 acatccgcaaggatctcgacgcccagatcctctcca 292 |||||||||||||||| || ||||| |||||||||| Sbjct: 23826 acatccgcaaggatcttgatgcccaaatcctctcca 23791 Score = 107 bits (54), Expect = 8e-20 Identities = 113/132 (85%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 24100 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 24044 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 24043 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 23984 Query: 182 ccatccacaagg 193 | ||||||||| Sbjct: 23983 gcgtccacaagg 23972 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 47290 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 47234 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 47233 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 47174 Query: 182 ccatccacaagg 193 | ||||||||| Sbjct: 47173 gcgtccacaagg 47162 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 71839 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 71783 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 71782 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 71723 Query: 182 ccatccacaagg 193 | ||||||||| Sbjct: 71722 gcgtccacaagg 71711 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 101556 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 101500 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 101499 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 101440 Query: 182 ccatccacaagg 193 | ||||||||| Sbjct: 101439 gcgtccacaagg 101428 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 424 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 483 |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| ||| Sbjct: 22199 gacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgccctagt 22140 Query: 484 ttcaattgatt 494 ||||||||||| Sbjct: 22139 ttcaattgatt 22129
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 290 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 349 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 8240 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 8181 Query: 350 caggttccttggatgattttggatttgaagattaccttaact 391 | |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 8180 ctggttccttagatgattttgggtttgaagattatcttaact 8139 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 9094 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 9035 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 9034 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 8993 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 62 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 121 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 9315 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 9259 Query: 122 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 181 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 9258 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 9199 Query: 182 ccatccacaagg 193 | ||||||||| Sbjct: 9198 gcgtccacaagg 9187
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 121 bits (61), Expect = 5e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 291 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 350 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 156140 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 156199 Query: 351 aggttccttggatgattttggatttgaagatta 383 ||||||||||||||||| || ||||||||||| Sbjct: 156200 tggttccttggatgatttcgggtttgaagatta 156232 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 154263 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 154322 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 154323 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 154364 Score = 109 bits (55), Expect = 2e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 87 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 146 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 154068 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 154127 Query: 147 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 193 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 154128 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 154174 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 424 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 483 |||||||||||||| ||||||||||||||||| |||| |||||||| || ||||| ||| Sbjct: 156934 gacatgcaccacggaatggaggttcgccttggtttgtcaaagggaccgatttgccctagt 156993 Query: 484 ttcaattgatt 494 ||||||||||| Sbjct: 156994 ttcaattgatt 157004
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 121 bits (61), Expect = 5e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 291 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 350 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 8584325 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 8584384 Query: 351 aggttccttggatgattttggatttgaagatta 383 ||||||||||||||||| || ||||||||||| Sbjct: 8584385 tggttccttggatgatttcgggtttgaagatta 8584417 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 8582450 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 8582509 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 8582510 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 8582551 Score = 109 bits (55), Expect = 2e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 87 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 146 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 8582255 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 8582314 Query: 147 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 193 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 8582315 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 8582361 Score = 77.8 bits (39), Expect = 7e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 424 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 483 |||||||||||||| |||||||||| |||||| |||| |||||||| || ||||| ||| Sbjct: 8585121 gacatgcaccacggaatggaggttctccttggtttgtcaaagggaccgatttgccctagt 8585180 Query: 484 ttcaattgatt 494 ||||||||||| Sbjct: 8585181 ttcaattgatt 8585191 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 cctcgcgccggcgcaccccgt 173 ||||||||||||||||||||| Sbjct: 15959863 cctcgcgccggcgcaccccgt 15959883
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 121 bits (61), Expect = 5e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 291 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 350 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 21293254 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 21293313 Query: 351 aggttccttggatgattttggatttgaagatta 383 ||||||||||||||||| || ||||||||||| Sbjct: 21293314 tggttccttggatgatttcgggtttgaagatta 21293346 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 21291377 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 21291436 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 21291437 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 21291478 Score = 109 bits (55), Expect = 2e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 87 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 146 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 21291182 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 21291241 Query: 147 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 193 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 21291242 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 21291288 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 424 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 483 |||||||||||||| ||||||||||||||||| |||| |||||||| || ||||| ||| Sbjct: 21294048 gacatgcaccacggaatggaggttcgccttggtttgtcaaagggaccgatttgccctagt 21294107 Query: 484 ttcaattgatt 494 ||||||||||| Sbjct: 21294108 ttcaattgatt 21294118
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 121 bits (61), Expect = 5e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 291 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 350 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 105535 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 105594 Query: 351 aggttccttggatgattttggatttgaagatta 383 ||||||||||||||||| || ||||||||||| Sbjct: 105595 tggttccttggatgatttcgggtttgaagatta 105627 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 103660 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 103719 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 103720 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 103761 Score = 109 bits (55), Expect = 2e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 87 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 146 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 103465 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 103524 Query: 147 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 193 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 103525 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 103571 Score = 77.8 bits (39), Expect = 7e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 424 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 483 |||||||||||||| |||||||||| |||||| |||| |||||||| || ||||| ||| Sbjct: 106331 gacatgcaccacggaatggaggttctccttggtttgtcaaagggaccgatttgccctagt 106390 Query: 484 ttcaattgatt 494 ||||||||||| Sbjct: 106391 ttcaattgatt 106401
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 121 bits (61), Expect = 5e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 291 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 350 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 14121 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 14180 Query: 351 aggttccttggatgattttggatttgaagatta 383 ||||||||||||||||| || ||||||||||| Sbjct: 14181 tggttccttggatgatttcgggtttgaagatta 14213 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 191 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 250 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 12246 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 12305 Query: 251 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 292 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 12306 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 12347 Score = 109 bits (55), Expect = 2e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 87 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 146 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 12051 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 12110 Query: 147 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 193 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 12111 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 12157 Score = 77.8 bits (39), Expect = 7e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 424 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 483 |||||||||||||| |||||||||| |||||| |||| |||||||| || ||||| ||| Sbjct: 14917 gacatgcaccacggaatggaggttctccttggtttgtcaaagggaccgatttgccctagt 14976 Query: 484 ttcaattgatt 494 ||||||||||| Sbjct: 14977 ttcaattgatt 14987
>dbj|AK099813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099K24, full insert sequence Length = 2648 Score = 75.8 bits (38), Expect = 3e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 334 ggatatgaggcaatgacaggttccttggatgattttggatttgaagattaccttaact 391 |||||||||||| |||| |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 4 ggatatgaggcactgactggttccttagatgattttgggtttgaagattatcttaact 61
>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence Length = 211799 Score = 48.1 bits (24), Expect = 0.060 Identities = 24/24 (100%) Strand = Plus / Plus Query: 642 ttttcagtttttggacttgtgttt 665 |||||||||||||||||||||||| Sbjct: 152858 ttttcagtttttggacttgtgttt 152881
>ref|NM_001070543.1| Oryza sativa (japonica cultivar-group) Os10g0100300 (Os10g0100300) mRNA, complete cds Length = 1700 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 789 cgagctgtaaggaagttcatcaagctt 815 |||||||||||| |||||||||||||| Sbjct: 279 cgagctgtaagggagttcatcaagctt 305
>emb|AJ851434.1| Gallus gallus partial mRNA for hypothetical protein, clone 2l15 Length = 2918 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 361 gatgattttggatttgaagatta 383 ||||||||||||||||||||||| Sbjct: 257 gatgattttggatttgaagatta 279
>dbj|AK104934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D05, full insert sequence Length = 1681 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 789 cgagctgtaaggaagttcatcaagctt 815 |||||||||||| |||||||||||||| Sbjct: 263 cgagctgtaagggagttcatcaagctt 289
>dbj|AK065110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O01, full insert sequence Length = 1702 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 789 cgagctgtaaggaagttcatcaagctt 815 |||||||||||| |||||||||||||| Sbjct: 281 cgagctgtaagggagttcatcaagctt 307
>ref|NM_105394.2| Arabidopsis thaliana unknown protein (AT1G67250) mRNA, complete cds Length = 677 Score = 44.1 bits (22), Expect = 0.94 Identities = 49/58 (84%) Strand = Plus / Plus Query: 430 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 487 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 449 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 506
>gb|BT011933.1| Arabidopsis thaliana At1g67250 mRNA sequence Length = 423 Score = 44.1 bits (22), Expect = 0.94 Identities = 49/58 (84%) Strand = Plus / Plus Query: 430 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 487 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 361 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 418
>gb|AY086781.1| Arabidopsis thaliana clone 27632 mRNA, complete sequence Length = 604 Score = 44.1 bits (22), Expect = 0.94 Identities = 49/58 (84%) Strand = Plus / Plus Query: 430 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 487 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 432 caccacgggatggaagttcgtcttggcatctcgaagggaccgatttacccaagtttca 489
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 catccgcaaggatctcgacgcc 279 |||||||||||||||||||||| Sbjct: 5004005 catccgcaaggatctcgacgcc 5003984
>gb|AY044313.1| Arabidopsis thaliana Unknown protein (F1N21.15) mRNA, complete cds Length = 474 Score = 44.1 bits (22), Expect = 0.94 Identities = 49/58 (84%) Strand = Plus / Plus Query: 430 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 487 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 364 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 421
>gb|AC092828.16| Homo sapiens 12 BAC RP11-282K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127836 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 566 atggatttgtgaaacatgagaa 587 |||||||||||||||||||||| Sbjct: 101904 atggatttgtgaaacatgagaa 101925
>gb|BT003679.1| Arabidopsis thaliana At1g67250 mRNA, complete cds Length = 426 Score = 44.1 bits (22), Expect = 0.94 Identities = 49/58 (84%) Strand = Plus / Plus Query: 430 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 487 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 364 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 421
>dbj|AK117205.1| Arabidopsis thaliana At1g67250 mRNA for unknown protein, complete cds, clone: RAFL16-75-L12 Length = 583 Score = 44.1 bits (22), Expect = 0.94 Identities = 49/58 (84%) Strand = Plus / Plus Query: 430 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 487 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 444 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 501
>gb|AC002130.2|AC002130 Genomic sequence for Arabidopsis thaliana BAC F1N21 from chromosome I, complete sequence Length = 114738 Score = 44.1 bits (22), Expect = 0.94 Identities = 49/58 (84%) Strand = Plus / Minus Query: 430 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 487 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 26741 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 26684
>emb|CT827799.7| Pig DNA sequence from clone CH242-168I16 on chromosome 14, complete sequence Length = 185131 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 645 tcagtttttggacttgtgttt 665 ||||||||||||||||||||| Sbjct: 24334 tcagtttttggacttgtgttt 24314
>ref|NM_001073416.1| Oryza sativa (japonica cultivar-group) Os12g0514900 (Os12g0514900) mRNA, complete cds Length = 996 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 agcggcgatggcgagcggcgg 77 ||||||||||||||||||||| Sbjct: 58 agcggcgatggcgagcggcgg 78
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 cgcggcgacctcgcgccggcg 165 ||||||||||||||||||||| Sbjct: 3557152 cgcggcgacctcgcgccggcg 3557172
>gb|AY020123.1| Oryza sativa microsatellite MRG2448 containing (CT)X19, genomic sequence Length = 238 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 agcggcgatggcgagcggcgg 77 ||||||||||||||||||||| Sbjct: 96 agcggcgatggcgagcggcgg 76
>gb|AC121564.4| Mus musculus BAC clone RP23-214I6 from 5, complete sequence Length = 190110 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 635 gtcactgttttcagtttttgg 655 ||||||||||||||||||||| Sbjct: 144088 gtcactgttttcagtttttgg 144108
>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical class II region, partial sequence Length = 130898 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 845 ataaacaggtgtacaatagag 865 ||||||||||||||||||||| Sbjct: 58574 ataaacaggtgtacaatagag 58554
>gb|AY152834.1| Felis catus clone PAC f2 major histocompatiblity complex classical class II region, partial sequence Length = 64168 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 845 ataaacaggtgtacaatagag 865 ||||||||||||||||||||| Sbjct: 33146 ataaacaggtgtacaatagag 33126
>gb|AY152835.1| Felis catus clone PAC g7 major histocompatiblity complex classical class II region, partial sequence Length = 77680 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 845 ataaacaggtgtacaatagag 865 ||||||||||||||||||||| Sbjct: 12677 ataaacaggtgtacaatagag 12657
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 agcggcgatggcgagcggcgg 77 ||||||||||||||||||||| Sbjct: 19988942 agcggcgatggcgagcggcgg 19988962
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 cctcgcgccggcgcaccccgt 173 ||||||||||||||||||||| Sbjct: 102801 cctcgcgccggcgcaccccgt 102781
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 3.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 119 tccgcttcggcgtcaacgacagcgtccgcggcg 151 |||| ||||||| | |||||||||||||||||| Sbjct: 6430760 tccggttcggcgacgacgacagcgtccgcggcg 6430728
>dbj|AP005565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1238_G07 Length = 78304 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 cctcgcgccggcgcaccccgt 173 ||||||||||||||||||||| Sbjct: 30576 cctcgcgccggcgcaccccgt 30596
>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b, complete sequence Length = 45450 Score = 42.1 bits (21), Expect = 3.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 423 ggacatgcaccacgggatggaggttcgccttgg 455 ||||||||| || |||||||| ||||||||||| Sbjct: 33298 ggacatgcatcatgggatggaagttcgccttgg 33330
>dbj|AK101966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H08, full insert sequence Length = 997 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 agcggcgatggcgagcggcgg 77 ||||||||||||||||||||| Sbjct: 59 agcggcgatggcgagcggcgg 79
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 agcggcgatggcgagcggcgg 77 ||||||||||||||||||||| Sbjct: 38318 agcggcgatggcgagcggcgg 38298
>gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, complete sequence Length = 217058 Score = 42.1 bits (21), Expect = 3.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 631 taatgtcactgttttcagtttttggactt 659 |||||||||||||| ||||||||| |||| Sbjct: 82814 taatgtcactgtttccagtttttgtactt 82842 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 150,716,368 Number of extensions: 8081917 Number of successful extensions: 168407 Number of sequences better than 10.0: 53 Number of HSP's gapped: 168382 Number of HSP's successfully gapped: 98 Length of query: 982 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 959 Effective length of database: 18,503,978,556 Effective search space: 17745315435204 Effective search space used: 17745315435204 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
