ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf83l17 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os04g28850:12004.t02580:unspliced-genomic expressed protein| Length = 673 Score = 32.7 bits (65), Expect(3) = 5e-07 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 / +3 Query: 230 SGDITKESLDPNKPRCVRNCPAPAG 304 +G++ +L P++P CV++CPA G Sbjct: 279 AGNVGSGALRPDRPACVQSCPARGG 353 Score = 29.5 bits (58), Expect(3) = 5e-07 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +2 / +3 Query: 119 VDKAVMPRLSSSMRLEDGVAPELAL 193 V + M SSS RLED VAPEL + Sbjct: 177 VRRLAMVAPSSSARLEDAVAPELGV 251 Score = 27.2 bits (53), Expect(3) = 5e-07 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +2 / +3 Query: 302 GYPYTGRGCNKYYDCRTS 355 G YTGRGC Y C + Sbjct: 348 GGSYTGRGCKTVYRCNNN 401
>LOC_Os04g28720:12004.t02567:unspliced-genomic hypothetical protein| Length = 267 Score = 53.8 bits (111), Expect = 8e-07 Identities = 24/55 (43%), Positives = 30/55 (54%) Frame = +2 / +1 Query: 188 ALVTAVDVHRRVYGSGDITKESLDPNKPRCVRNCPAPAGYPYTGRGCNKYYDCRT 352 A AV VHRRV + I LD ++ C+R + G YTGRGC K Y C+T Sbjct: 100 AAAEAVVVHRRVLATTSIQDSVLDGDRQACLRTPCSGRGQSYTGRGCAKAYGCQT 264
>LOC_Os04g28840:12004.t02579:unspliced-genomic hypothetical protein| Length = 2106 Score = 48.3 bits (99), Expect = 4e-05 Identities = 19/41 (46%), Positives = 22/41 (53%) Frame = +2 / +1 Query: 206 DVHRRVYGSGDITKESLDPNKPRCVRNCPAPAGYPYTGRGC 328 D+H+RV G G + L PNK C G PYTGRGC Sbjct: 187 DLHQRVLGGGGSNSDGLVPNKAACPAPSCPAPGQPYTGRGC 309 Score = 37.7 bits (76), Expect = 0.054 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = -3 / -2 Query: 330 LHPRPVYG*PAGAGQLRTHRGLLGSRDSLVMSPEP*TRRC 211 + PRPVYG P H L G+R S P P TR C Sbjct: 311 MQPRPVYGCPGAGHDGAGHAALFGTRPSEFEPPPPSTRWC 192
>LOC_Os04g28830:12004.t02578:unspliced-genomic hypothetical protein| Length = 411 Score = 30.4 bits (60), Expect(2) = 0.17 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +2 / +1 Query: 143 LSSSMRLEDGVAPELALVTAVDVHRR 220 + S RLED VAPEL V++H+R Sbjct: 157 MKKSTRLEDVVAPELIGADLVELHQR 234 Score = 22.6 bits (43), Expect(2) = 0.17 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +2 / +1 Query: 320 RGCNKYYDCRT 352 RGCN Y C T Sbjct: 349 RGCNPKYGCNT 381
>LOC_Os08g45190:12008.t04240:unspliced-genomic PGR5, putative, expressed| Length = 1152 Score = 34.5 bits (69), Expect = 0.50 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +3 / -2 Query: 246 RNPWTPTSHDASATARRRQVIRTRAGDATSTTIAVRQG 359 R+ W S ASA RRR RTR ATS+T+ + G Sbjct: 734 RSSWQGGSSPASAWRRRRWSCRTR*SPATSSTVRIIDG 621
>LOC_Os11g23750:12011.t01995:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 6430 Score = 31.3 bits (62), Expect(2) = 0.72 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -1 / -2 Query: 386 VSFTCSLPLSLTYGNRSTCCIPGPCTDNL 300 V FT SLP++ + C + GPC NL Sbjct: 3420 VFFTVSLPVTCLLAKEALCILSGPCLLNL 3334 Score = 24.4 bits (47), Expect(2) = 0.72 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = -3 / -1 Query: 483 FFFWYGNMLKNRVQECM 433 F W+ N L NRV C+ Sbjct: 5062 FHNWFNNNLFNRVHRCL 5012
>LOC_Os04g31550:12004.t02836:unspliced-genomic expressed protein| Length = 960 Score = 33.6 bits (67), Expect = 0.94 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 / +1 Query: 212 HRRVYGSGDITKESLDPNKPRCVRNCPAPAGYPYT 316 HRR +G I L P+ C +CPA +G PYT Sbjct: 502 HRRRELAGKIPFGPLRPDGSACRPHCPAKSGLPYT 606
>LOC_Os06g12450:12006.t01121:unspliced-genomic soluble starch synthase 2-3, chloroplast precursor, putative,| expressed Length = 4979 Score = 31.3 bits (62), Expect(2) = 1.0 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 / +1 Query: 203 VDVHRRVYGSGDITKESLDPNKPRC 277 VDVH + G + T SLD +KPRC Sbjct: 3940 VDVHLQSDGYANYTVASLDSSKPRC 4014 Score = 23.5 bits (45), Expect(2) = 1.0 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = +1 / +3 Query: 268 ATMRPQLPGAGRLSVHGPGMQQVLRL 345 A +RP PG +V G QQ R+ Sbjct: 4164 AGLRPPRPGGDAAAVRGAAQQQGARV 4241
>LOC_Os03g15340:12003.t01320:unspliced-genomic chemocyanin precursor, putative, expressed| Length = 877 Score = 33.1 bits (66), Expect = 1.3 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +2 / +3 Query: 62 LLLALVLAGPDTAAAAVYNVD 124 LLL +L G D AAAA YNVD Sbjct: 126 LLLVCLLVGSDVAAAATYNVD 188
>LOC_Os11g20190:12011.t01789:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 1315 Score = 32.7 bits (65), Expect = 1.8 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 / -3 Query: 386 VSFTCSLPLSLTYGNRSTCCIPGPCTDNLPAPGSCGR 276 V T SLP++ + C + GPC NL +C R Sbjct: 1154 VFLTVSLPMTCLLAKEALCILSGPCLLNLGLRAACTR 1044
>LOC_Os04g11240:12004.t00952:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6567 Score = 27.6 bits (54), Expect(2) = 2.4 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +3 / -2 Query: 33 PWAEMCASLFCSLRLC 80 PWA+ AS+FCS C Sbjct: 5525 PWAKSLASMFCSRDTC 5478 Score = 26.3 bits (51), Expect(2) = 2.4 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 / -2 Query: 340 RLPYVKDNGSEQVNETAISP 399 RLPYV D S Q +T ISP Sbjct: 1901 RLPYVSDVTSYQSLQTRISP 1842
>LOC_Os01g44069:12001.t03918:unspliced-genomic glycerol-3-phosphate acyltransferase 1, putative, expressed| Length = 6981 Score = 32.2 bits (64), Expect = 2.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 / +2 Query: 261 PTSHDASATARRRQVIRTRAGDATSTTIAVRQGQW 365 P ASATARR R+ A A ++ R G+W Sbjct: 6140 PAPSSASATARRASAPRSPASSAGASCTCARTGRW 6244
>LOC_Os02g51130:12002.t04697:unspliced-genomic glycosyl transferase family 8 protein, expressed| Length = 2017 Score = 29.5 bits (58), Expect(2) = 2.8 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +2 / +2 Query: 176 APELALVTAVDVHRRVYGSGDITKESLDP 262 A +LALV + VHRR G GD P Sbjct: 344 ASQLALVPHLPVHRRALGEGDARANQARP 430 Score = 22.6 bits (43), Expect(2) = 2.8 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = +1 / +2 Query: 259 PQQATMRPQLPGAGRLSVHGPG 324 P+Q P+ P SVH PG Sbjct: 620 PRQRLRHPRRPARPAPSVHRPG 685
>LOC_Os12g08564:12012.t00738:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 16591 Score = 25.4 bits (49), Expect(2) = 2.8 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = +2 / -1 Query: 281 RNCPAPAGYPYTGRGCNKYYDCRTS 355 R C YPY GC + C TS Sbjct: 2866 RLCTPLGLYPYEKYGCTRVVSCLTS 2792 Score = 23.5 bits (45), Expect(2) = 2.8 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = +3 / -2 Query: 411 FYFEFHFACIP 443 FYF FH +C P Sbjct: 2700 FYFSFHSSCHP 2668
>LOC_Os09g06880:12009.t00484:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3490 Score = 31.8 bits (63), Expect = 3.3 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +2 / +2 Query: 167 DGVAPELALVTAVDVHRRVYGSGDITKESLDPNKPRCVRNC 289 D P L T VD+H+ +Y + D K L KPR + C Sbjct: 1490 DSTPPTLEPSTPVDMHKPLYSTYDSYKGYLPK*KPRTYKPC 1612
>LOC_Os04g54360:12004.t04908:unspliced-genomic transferase, transferring glycosyl groups, putative, expressed| Length = 2557 Score = 31.8 bits (63), Expect = 3.3 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +3 / -2 Query: 33 PWAEMCASLFCSLRLCSLA 89 PWA CA + C+ R+C L+ Sbjct: 864 PWAAACARMLCARRICELS 808
>LOC_Os04g53290:12004.t04801:unspliced-genomic polyphenol oxidase II, chloroplast precursor, putative| Length = 636 Score = 31.8 bits (63), Expect = 3.3 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 / +3 Query: 256 GPQQATMRPQLPGAGRLSVHGPG 324 GP RP+LP GR +VH PG Sbjct: 321 GPPSPRSRPRLPRRGRAAVHVPG 389
>LOC_Os03g10800:12003.t00881:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 5556 Score = 31.8 bits (63), Expect = 3.3 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 / +2 Query: 85 SEHKRKEQKRDAHISAHGSWL 23 +E KE++R AH+ AHG W+ Sbjct: 710 AEVSDKERERHAHVQAHGGWM 772
>LOC_Os03g52860:12003.t04608:unspliced-genomic lipoxygenase 2, putative, expressed| Length = 3514 Score = 27.6 bits (54), Expect(2) = 4.5 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = +1 / +1 Query: 316 GPGMQQVLRLPYVKDNGSEQVNETAISPRNPCSISNFTLHAFL 444 G G Q +R D + +E P+ PC F LHA L Sbjct: 3100 GAGGVQAVRRAADGDREPRRRHEQGPPPQEPCRADQFPLHAAL 3228 Score = 24.4 bits (47), Expect(2) = 4.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 / +3 Query: 246 RNPWTPTSHDASATARRRQVIRTRAGDA 329 R+ T TSH AS+T R TRA + Sbjct: 1542 RSAPTSTSHPASSTPSRTSSSSTRAASS 1625
>LOC_Os08g33810:12008.t03122:unspliced-genomic lipoate protein ligase-like protein, putative, expressed| Length = 4754 Score = 31.3 bits (62), Expect = 4.6 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -3 / -1 Query: 474 WYGNMLKNRVQECMQSEIRNRTRIPWRYRRFVHLLTAIV 358 +YG +KNR+ + +S +R R WR RR + +L I+ Sbjct: 4013 YYG*GMKNRLTQVKKSVVRTYKR*GWR*RRNICVLQLII 3897
>LOC_Os04g14510:12004.t01270:unspliced-genomic PHD-finger family protein, expressed| Length = 8878 Score = 31.3 bits (62), Expect = 4.6 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = -1 / +1 Query: 362 LSLTYGNRSTCCIPGPCTDNLPAPGSCGRIVACWGPG 252 L+ TY N + D LP S GRI CW PG Sbjct: 1702 LNTTYQNHIVLELLNRLIDKLPFVHSMGRIS*CWKPG 1812
>LOC_Os01g62920:12001.t05665:unspliced-genomic homeodomain protein JUBEL2, putative, expressed| Length = 4928 Score = 31.3 bits (62), Expect = 4.6 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = +2 / -1 Query: 212 HRRVYGSGDITKESLDPNKPRCVRNCPAPAGYPYTGR 322 HRR G+ D+ + RC+R+ P P +GR Sbjct: 4115 HRRPAGADDVVMQCCAARSARCMRSSPVPGWTGTSGR 4005
>LOC_Os02g52970:12002.t04877:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5095 Score = 27.6 bits (54), Expect(2) = 6.2 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +3 / -2 Query: 33 PWAEMCASLFCSLRLC 80 PWA+ AS+FCS C Sbjct: 4287 PWAKSLASIFCSRDTC 4240 Score = 24.4 bits (47), Expect(2) = 6.2 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 / -1 Query: 340 RLPYVKDNGSEQVNETAISP 399 RLP+V D S Q +T ISP Sbjct: 625 RLPFVSDVTSYQSLQTRISP 566
>LOC_Os08g05820:12008.t00474:unspliced-genomic monocopper oxidase-like protein SKS1 precursor, putative, expressed| Length = 5142 Score = 30.9 bits (61), Expect = 6.3 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = -1 / -3 Query: 323 PGPCTDNLPAPGSCGRIVACWGPGIPW 243 PG +PA SC + W P +PW Sbjct: 1966 PGGIGQLVPATPSCHEFILIWMPSLPW 1886
>LOC_Os07g32600:12007.t02942:unspliced-genomic glucan endo-1,3-beta-glucosidase 3 precursor, putative, expressed| Length = 5878 Score = 30.9 bits (61), Expect = 6.3 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +3 / +2 Query: 252 PWTPTSHDASATARRRQVIRTRAGDATSTTIAVRQGQWQ*ASERNGD 392 P TPTS S T+ R+ R +TST+ + R + R GD Sbjct: 1349 PTTPTSSSTSTTSPARRCAPARRPASTSTSSSTRTSARARSRRRTGD 1489
>LOC_Os06g31370:12006.t02838:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 3658 Score = 30.9 bits (61), Expect = 6.3 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 / -2 Query: 386 VSFTCSLPLSLTYGNRSTCCIPGPCTDNL 300 V T SLP++ + + C + GPC NL Sbjct: 672 VFLTVSLPMTCLFAKEALCILSGPCLLNL 586
>LOC_Os06g28750:12006.t02579:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 6942 Score = 30.9 bits (61), Expect = 6.3 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 / -3 Query: 386 VSFTCSLPLSLTYGNRSTCCIPGPCTDNL 300 V T SLP++ + + C + GPC NL Sbjct: 2218 VFLTVSLPMTCLFAKEALCILSGPCLLNL 2132
>LOC_Os04g24210:12004.t02135:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 3961 Score = 30.9 bits (61), Expect = 6.3 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 / -3 Query: 386 VSFTCSLPLSLTYGNRSTCCIPGPCTDNL 300 V T SLP++ + + C + GPC NL Sbjct: 806 VFLTVSLPINCLFAKEALCILSGPCLLNL 720
>LOC_Os04g22400:12004.t01970:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 6016 Score = 30.9 bits (61), Expect = 6.3 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 / -2 Query: 386 VSFTCSLPLSLTYGNRSTCCIPGPCTDNLPAPGSCGR 276 V T SLP++ + C + GPC NL +C R Sbjct: 3387 VFLTVSLPMTYLLSKEALCILRGPCLLNLGLRVACTR 3277
>LOC_Os03g25040:12003.t02196:unspliced-genomic alpha-L-fucosidase 2 precursor, putative, expressed| Length = 3392 Score = 30.9 bits (61), Expect = 6.3 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 / +2 Query: 252 PWTPTSHDASATARRRQVIRTRAGDATST 338 P TPT A+AT RRR R+R G + T Sbjct: 3002 PTTPTRWCATATPRRRTCARSRPGTSPGT 3088
>LOC_Os02g30940:12002.t02787:unspliced-genomic hypothetical protein| Length = 2163 Score = 30.9 bits (61), Expect = 6.3 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 / -1 Query: 143 LSSSMRLEDGVAPELALVTAVDVHRRVYGSGDITKESLD 259 L SMR +D +A + +VHRR+Y G + +E ++ Sbjct: 249 LKESMRGDDDLAADRGHGREGEVHRRLYADGGVLREVVE 133
>LOC_Os01g12480:12001.t01115:unspliced-genomic expressed protein| Length = 2013 Score = 30.9 bits (61), Expect = 6.3 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = -3 / +1 Query: 324 PRPVYG*PAGAGQLRTHRGLLGSRDSLVMSPEP 226 PRPV G PA G+LR R L S P P Sbjct: 253 PRPVPGGPAALGRLRRRRRLASGTTSW*ARPRP 351
>LOC_Os06g15310:12006.t01404:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6904 Score = 27.6 bits (54), Expect(2) = 8.0 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +3 / -2 Query: 33 PWAEMCASLFCSLRLC 80 PWA+ AS+FCS C Sbjct: 5637 PWAKSLASIFCSRDTC 5590 Score = 24.4 bits (47), Expect(2) = 8.0 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 / -3 Query: 340 RLPYVKDNGSEQVNETAISP 399 RLP+V D S Q +T ISP Sbjct: 1976 RLPFVSDVTSYQSLQTRISP 1917
>LOC_Os01g60080:12001.t05392:unspliced-genomic L-ascorbate oxidase homolog precursor, putative, expressed| Length = 2663 Score = 26.3 bits (51), Expect(2) = 8.5 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -2 / +1 Query: 202 RRHQRELGRDAILQPHRR*QPWHHR 128 RR + L R +QPHRR HHR Sbjct: 1453 RRVLQRLLRGVRVQPHRRRAAGHHR 1527 Score = 24.4 bits (47), Expect(2) = 8.5 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -2 / +3 Query: 319 ARVRITCRRRAVADASW 269 +R R TC RA A +SW Sbjct: 969 SRRRSTCASRATASSSW 1019
>LOC_Os11g34030:12011.t02956:unspliced-genomic hypothetical protein| Length = 1337 Score = 30.4 bits (60), Expect = 8.6 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -1 / -3 Query: 383 SFTCSLPLSLTYGNRSTCCIPGP 315 S+ CSLP S T G RS C P P Sbjct: 1149 SWRCSLPHSHTRGRRSLLCQPPP 1081
>LOC_Os09g37880:12009.t03262:unspliced-genomic serine/threonine-protein kinase receptor precursor, putative| Length = 3887 Score = 30.4 bits (60), Expect = 8.6 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +3 / +2 Query: 252 PWTPTSHDASATARRRQVIRTRAGDATSTTIAVRQ 356 P T + +ATARRR+ + RAG +T+++ R+ Sbjct: 875 PTTSAARTGTATARRRRRLSRRAGASTASSRRARR 979
>LOC_Os09g20530:12009.t01787:unspliced-genomic pyruvate decarboxylase isozyme 3, putative| Length = 522 Score = 30.4 bits (60), Expect = 8.6 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 / +3 Query: 199 RHQRELGRDAILQPHRR*QPWHHR 128 RH R L DA PHRR +P H R Sbjct: 126 RHARGLETDASRSPHRRARPPHRR 197
>LOC_Os08g44140:12008.t04138:unspliced-genomic transmembrane 9 superfamily protein member 2 precursor, putative,| expressed Length = 3813 Score = 30.4 bits (60), Expect = 8.6 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -1 / +3 Query: 299 PAPGSCGRIVACWGPGIPW 243 P PG+ R ACW IPW Sbjct: 198 PPPGNGSRSCACWISAIPW 254
>LOC_Os08g44090:12008.t04134:unspliced-genomic transmembrane 9 superfamily protein member 2 precursor, putative,| expressed Length = 3934 Score = 30.4 bits (60), Expect = 8.6 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -1 / +2 Query: 299 PAPGSCGRIVACWGPGIPW 243 P PG+ R ACW IPW Sbjct: 221 PPPGNGSRSCACWISAIPW 277
>LOC_Os08g10580:12008.t04264:unspliced-genomic methyl-CpG binding domain containing protein, expressed| Length = 5031 Score = 30.4 bits (60), Expect = 8.6 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 / -1 Query: 346 PYVKDNGSEQVNETAISPRNP 408 PY+ GS + ET+ SPR+P Sbjct: 954 PYLSKKGSHTIKETSYSPRSP 892
>LOC_Os07g12190:12007.t01091:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1095 Score = 30.4 bits (60), Expect = 8.6 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = -1 / +2 Query: 401 LGDIAVSFTCSLPLSLTYGNRST 333 LGDI ++F L +SL++ NRST Sbjct: 815 LGDIGLAFAAPLSISLSFINRST 883
>LOC_Os06g04240:12006.t00313:unspliced-genomic Q-rich domain protein, putative, expressed| Length = 731 Score = 30.4 bits (60), Expect = 8.6 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -1 / -3 Query: 446 YRNACKVKFEIEHGFLGDIAVSFTCSLPLSLTYGNRSTCC 327 Y + ++K +IE G LGD S+TCS + L ST C Sbjct: 549 YNPSSQLKQQIEAG*LGD**SSYTCSCEIFLKKHQISTPC 430
>LOC_Os05g33380:12005.t02933:unspliced-genomic fructose-bisphosphate aldolase cytoplasmic isozyme, putative,| expressed Length = 2187 Score = 30.4 bits (60), Expect = 8.6 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = -3 / -2 Query: 471 YGNMLKNRVQECMQSEIRNRTRIPWRYRRFV 379 +GN+L +V E ++ +I + R+P RY+ + Sbjct: 2153 FGNVLHKKVPELLRQDILDNHRLPSRYQNHI 2061
>LOC_Os05g31230:12005.t02719:unspliced-genomic N-acetyltransferase ESCO1, putative, expressed| Length = 7745 Score = 30.4 bits (60), Expect = 8.6 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +2 / -3 Query: 47 VCVSFLLLALVLAGPDTAAAAVYNVDKAVMPRLSSSMRLEDGVAPELALVTAV 205 VC+ LL+ +V AG A + +K +P+L +R+ + +LA+ TA+ Sbjct: 6006 VCLVSLLIVVVPAGIHHATNRAHVEEKIGLPKLQVELRVVPLLVEDLAIRTAL 5848
>LOC_Os04g53810:12004.t04854:unspliced-genomic leucoanthocyanidin reductase, putative, expressed| Length = 2155 Score = 30.4 bits (60), Expect = 8.6 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 / -1 Query: 196 HQRELGRDAILQPHRR 149 +QRE GRDA + PHRR Sbjct: 1252 YQREAGRDAGIDPHRR 1205
>LOC_Os03g53770:12003.t04695:unspliced-genomic RNA-binding region RNP-1, putative, expressed| Length = 4088 Score = 30.4 bits (60), Expect = 8.6 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 / -1 Query: 21 ASQLPWAEMCASLFCS 68 A QL W+E+C LFCS Sbjct: 3551 AYQLAWSELCKKLFCS 3504
>LOC_Os01g54930:12001.t04907:unspliced-genomic vascular plant one zinc finger protein, putative, expressed| Length = 5256 Score = 30.4 bits (60), Expect = 8.6 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -1 / +3 Query: 350 YGNRSTCCIPGPCTDNLPAPGSCGRI 273 Y STCCIP +L P +C RI Sbjct: 3804 YNVSSTCCIPEAQMRSLGLPSACSRI 3881
>LOC_Os02g49000:12002.t04484:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8666 Score = 27.6 bits (54), Expect(2) = 9.6 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +3 / -1 Query: 33 PWAEMCASLFCSLRLC 80 PWA+ AS+FCS C Sbjct: 7421 PWAKSLASIFCSRDTC 7374 Score = 24.4 bits (47), Expect(2) = 9.6 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 / -2 Query: 340 RLPYVKDNGSEQVNETAISP 399 RLP+V D S Q +T ISP Sbjct: 3763 RLPFVSDVTSYQSLQTRISP 3704
>LOC_Os12g06020:12012.t00488:unspliced-genomic dcp1-like decapping family protein, expressed| Length = 3155 Score = 25.4 bits (49), Expect(2) = 9.9 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +3 / +3 Query: 9 TDPLASQLPWAEMCASLFCSLRLC 80 T +S W + CA L SLR C Sbjct: 258 TSTSSSTSGWVKPCADLLASLRWC 329 Score = 25.4 bits (49), Expect(2) = 9.9 Identities = 10/25 (40%), Positives = 12/25 (48%) Frame = +2 / +3 Query: 197 TAVDVHRRVYGSGDITKESLDPNKP 271 T+ D HR YG G + L P P Sbjct: 2502 TSADAHRPAYGHGTPLLQPLPPPTP 2576 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 189,084,944 Number of extensions: 2994897 Number of successful extensions: 17263 Number of sequences better than 10.0: 49 Length of query: 162 Length of database: 55,613,886 Length adjustment: 47 Effective length of query: 115 Effective length of database: 52,968,820 Effective search space: 6091414300 Effective search space used: 6091414300 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
