ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf83l04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072718:Os06g0206200 | 254 | 6e-68 | 2 | AK062518:Os01g0264500 | 77 | 1e-14 | 3 | AK120051:Os01g0169500 | 31 | 0.81 | 4 | AK103687:Os03g0194400 | 30 | 2.4 | 5 | Os09g0542800:Os09g0542800 | 29 | 3.1 | 6 | Os01g0296200:Os01g0296200 | 29 | 4.0 | 7 | AK103518:Os07g0538200 | 29 | 4.0 | 8 | AK102249:Os07g0538200 | 29 | 4.0 | 9 | AK063101:Os03g0852600 | 28 | 5.2 | 10 | AK063799:Os11g0623700 | 28 | 5.3 | 11 | Os01g0621200:Os01g0621200 | 28 | 6.8 | 12 | AK109983:Os07g0676700 | 28 | 6.9 | 13 | Os02g0217800:Os02g0217800 | 28 | 8.9 | 14 | AK073695:Os04g0545000 | 28 | 8.9 | 15 | AK065111:Os01g0505400 | 28 | 8.9 | 16 | AK062363:Os06g0669200 | 28 | 9.0 |
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>AK072718:Os06g0206200 | Length = 159 Score = 254 bits (648), Expect = 6e-68 Identities = 126/151 (83%), Positives = 132/151 (87%) Frame = +3 Query: 84 MGTREVYEEKLRSGAHLHRDPTINPGLGSARCPRCLSLLNPTTNSGQGDWAITSVLHDAT 263 MGTREVYEEKLRSGAHLHRDPT+NPGLGSARCPRCLSLL P + SG+GDWAITSVLHDAT Sbjct: 1 MGTREVYEEKLRSGAHLHRDPTMNPGLGSARCPRCLSLLTPNS-SGEGDWAITSVLHDAT 59 Query: 264 AVTGSGAGAMLSAVHGFNTGIPFVQKHVKGPKWLHLLVGVPPLILFSGASALFGAYALPT 443 AV GSGAGAMLSAVHGFNTGIPFVQKHVKGPKWL LLVGVPPL+LFSG SALFGAYALPT Sbjct: 60 AVAGSGAGAMLSAVHGFNTGIPFVQKHVKGPKWLQLLVGVPPLLLFSGTSALFGAYALPT 119 Query: 444 FAQLTVTXXXXXXXXXXXXVSQITRHIEKAH 536 FAQLTVT VSQITR IE++H Sbjct: 120 FAQLTVTSYYAASSASHYAVSQITRQIERSH 150
>AK062518:Os01g0264500 | Length = 138 Score = 77.4 bits (189), Expect = 1e-14 Identities = 35/94 (37%), Positives = 53/94 (56%) Frame = +3 Query: 174 RCPRCLSLLNPTTNSGQGDWAITSVLHDATAVTGSGAGAMLSAVHGFNTGIPFVQKHVKG 353 RC C L+ + W + ++ D+ ++ GS G A +GFN +PFV++++KG Sbjct: 16 RCHHCAGPLSKDMETSS--WTVPPLVRDSFSMIGSAIGGTAGAFYGFNHTMPFVRRYIKG 73 Query: 354 PKWLHLLVGVPPLILFSGASALFGAYALPTFAQL 455 P W+H LVG PP+I+FS A A +P AQL Sbjct: 74 PMWMHFLVGAPPVIVFSSACAGLAGGTIPALAQL 107
>AK120051:Os01g0169500 | Length = 1842 Score = 31.2 bits (69), Expect = 0.81 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = +3 Query: 258 ATAVTGSGAGAMLSAVHGFNTGIP--FVQKHVKGPKWLHLLVGVPPLILFSGASALFGAY 431 A A G+GAGA+ T +P +Q+H + HLL VPP + + AL Sbjct: 8 AAAAAGAGAGAVALGRLVDRTRVPDPTLQRHAVAALFRHLLTSVPPPLPSAAHDALSSLL 67 Query: 432 ALP 440 A P Sbjct: 68 ASP 70
>AK103687:Os03g0194400 | Length = 118 Score = 29.6 bits (65), Expect = 2.4 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +3 Query: 27 NRPGLPLPKPGLAQPPAADMGTREVYEEKLRSG 125 +R G PLP+PG+ +PP D + Y G Sbjct: 73 HRVGAPLPRPGVRRPPLLDPRPAQAYVHSAGQG 105
>Os09g0542800:Os09g0542800 | Length = 543 Score = 29.3 bits (64), Expect = 3.1 Identities = 21/89 (23%), Positives = 36/89 (40%) Frame = -1 Query: 424 PNKALAPENKIKGGTPTSKCSHLGPLTCFWTNGIPVLNPCTALSIAPAPEPVTAVASCRT 245 P L PE + T++ L L + + AP+ P+ ++S + Sbjct: 37 PEPELEPEPALAPSLTTAETKLLDALHAALVDHRRAHPAAPVPATAPSEPPLPELSSALS 96 Query: 244 EVMAQSPCPELVVGLRRERQRGQRAEPRP 158 ++A P P+L +GL R +R P P Sbjct: 97 GLLASPPSPQLPLGLLRRLLALRRGVPLP 125
>Os01g0296200:Os01g0296200 | Length = 503 Score = 28.9 bits (63), Expect = 4.0 Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 2/98 (2%) Frame = +3 Query: 15 PGTQNRPGLPLPKPGLAQPPAADMGTREVYEEKLRSGAHLHRDPTINPGLGSARCPRCLS 194 PG G P P PG PP A + + GA P+ P G+A Sbjct: 62 PGPARHHGAPAPHPGRRSPP-APAPANPPSSDPMPGGA-----PSAAPAAGAA---TVYD 112 Query: 195 LLNPTTNSGQGDWAITSVLHDA--TAVTGSGAGAMLSA 302 ++ +G G T L A TA GAG +L+A Sbjct: 113 IVKDFGAAGDGVTDDTDALKTAWDTACADDGAGVVLAA 150
>AK103518:Os07g0538200 | Length = 699 Score = 28.9 bits (63), Expect = 4.0 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 304 TALSIAPAPEPVTAVASCRTEVMAQS 227 TA+ + PE VTA A CR +V A S Sbjct: 103 TAVDVGAVPEQVTAAALCRGDVSASS 128
>AK102249:Os07g0538200 | Length = 699 Score = 28.9 bits (63), Expect = 4.0 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 304 TALSIAPAPEPVTAVASCRTEVMAQS 227 TA+ + PE VTA A CR +V A S Sbjct: 103 TAVDVGAVPEQVTAAALCRGDVSASS 128
>AK063101:Os03g0852600 | Length = 206 Score = 28.5 bits (62), Expect = 5.2 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Frame = +3 Query: 186 CLSLLNPT--TNSGQGDWAITSVLHDATAVTGSGAGAMLSAVHGFNTGIPFVQKHVKGPK 359 CL +P+ TNS Q W+I ++ D+ +G + SA+ F + + K Sbjct: 43 CLMRASPSFRTNSRQMQWSIEAMTDDSADQSGDNNTRLFSAIQSFLSKL--------YGK 94 Query: 360 WLHLLVGVPPLILFSGASALFGAYALPTFA 449 L G+P ILF L G Y FA Sbjct: 95 LKKLRKGLPLKILF----FLIGFYCATAFA 120
>AK063799:Os11g0623700 | Length = 245 Score = 28.5 bits (62), Expect = 5.3 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 9/63 (14%) Frame = -1 Query: 334 TNGIPVLNPCTALSIAPAPEPVTAVASCRTEVMAQSPCPELVVGLR---------RERQR 182 T+ P+ PC+A S P PV ++SC T + S P GLR R+RQ+ Sbjct: 89 TSRSPLPTPCSASS---PPSPVPPISSCSTHALCPSILPR--PGLRPRLLLPPPPRQRQQ 143 Query: 181 GQR 173 +R Sbjct: 144 QRR 146
>Os01g0621200:Os01g0621200 | Length = 516 Score = 28.1 bits (61), Expect = 6.8 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 3/86 (3%) Frame = +3 Query: 63 AQPPAADMGTREVYEEKLRSGAHLHRDPTINPGLGSARCPRCLSLLNPTTNSGQGDWAIT 242 A+PPAAD G V E K RS R P SAR R S + +GD A T Sbjct: 14 AKPPAADAGAAFVLESKGRSHPSTPRPP-------SARNARADSAVICGWVPSRGDLAGT 66 Query: 243 ---SVLHDATAVTGSGAGAMLSAVHG 311 + H TA+ G + A+ G Sbjct: 67 WWHAGFHLTTAIVGPTVLTLPYALRG 92
>AK109983:Os07g0676700 | Length = 270 Score = 28.1 bits (61), Expect = 6.9 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = -1 Query: 271 VTAVASCRTEVMAQSPCPELVVGLRRERQRGQRAEPRPGLIVGSRWRWAP 122 V AVASCR + P VG+ R R R R I WR +P Sbjct: 196 VAAVASCRPPPQSPPPLSPAAVGIHRRRCHRPRCNHRHPQI----WRTSP 241
>Os02g0217800:Os02g0217800 | Length = 501 Score = 27.7 bits (60), Expect = 8.9 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 15 PGTQNRPGLPLPKPGLAQPPAADMGTREVYE 107 P ++NR +P P+P +PP M +R+ E Sbjct: 5 PPSKNRGHVPAPRPPPGKPPGRRMASRDAAE 35
>AK073695:Os04g0545000 | Length = 250 Score = 27.7 bits (60), Expect = 8.9 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = +3 Query: 237 ITSVLHDATAVTGSGAGAMLSAVHG----FNTGIPF 332 + ++HD A TG+ G M S+ HG GIPF Sbjct: 48 LPQLVHDHAAATGTNHGVMFSSDHGCLYPLLPGIPF 83
>AK065111:Os01g0505400 | Length = 577 Score = 27.7 bits (60), Expect = 8.9 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 14/96 (14%) Frame = +3 Query: 165 GSARCPRCLSLLNPTTNSGQGDWAITSVLHDATAV-------TGSGAGAMLSAVHGFNTG 323 GSA R L+ G +TS+ A A + +A +GF TG Sbjct: 15 GSALAGRALAAAGARHMFGVVGIPVTSLASRAAAAGVRFLAFRNEQSAGYAAAAYGFLTG 74 Query: 324 IPFVQKHVKGPKWLHLLVGVP-------PLILFSGA 410 P + V GP +H L G+ PL++ SG+ Sbjct: 75 SPGLLLTVSGPGCVHGLAGLSHATANAWPLLMVSGS 110
>AK062363:Os06g0669200 | Length = 102 Score = 27.7 bits (60), Expect = 9.0 Identities = 19/67 (28%), Positives = 23/67 (34%) Frame = -1 Query: 355 GPLTCFWTNGIPVLNPCTALSIAPAPEPVTAVASCRTEVMAQSPCPELVVGLRRERQRGQ 176 G C W P N + A A+ CR A SP E R ER+R + Sbjct: 14 GGCWCCWRGMWPPWNGRLPTAAAAGSRRSAALLLCRVAPAASSPAAEQFAQRRGERRREE 73 Query: 175 RAEPRPG 155 R G Sbjct: 74 REYEEEG 80 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,665,240 Number of extensions: 417143 Number of successful extensions: 1629 Number of sequences better than 10.0: 16 Number of HSP's gapped: 1589 Number of HSP's successfully gapped: 16 Length of query: 254 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 156 Effective length of database: 11,475,837 Effective search space: 1790230572 Effective search space used: 1790230572 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
