ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf80h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8IZQ5:SELH_HUMAN Selenoprotein H - Homo sapiens (Human) 44 6e-04
2Q4P333:CHS7_USTMA Chitin synthase 7 - Ustilago maydis (Smut fungus) 32 3.1
3Q91848:SIAM_XENLA Homeobox protein siamois - Xenopus laevis (Afr... 31 7.0
4Q7M8H5:LEPA_WOLSU GTP-binding protein lepA - Wolinella succinogenes 31 7.0
5Q4WP03:VID21_ASPFU Chromatin modification-related protein vid21 ... 30 9.1

>Q8IZQ5:SELH_HUMAN Selenoprotein H - Homo sapiens (Human)|
          Length = 122
 Score = 44.3 bits (103), Expect = 6e-04
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +2

Query: 371 VIVEACTQCQQFKRRALKVKEDLESAVPGVSVTINPEKPRRGCLEI 508
           V++E CT C+ + R A  + + L    P + V +NP KPRRG  E+
Sbjct: 36  VVIEHCTSCRVYGRNAAALSQALRLEAPELPVKVNPTKPRRGSFEV 81



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>Q4P333:CHS7_USTMA Chitin synthase 7 - Ustilago maydis (Smut fungus)|
          Length = 1273

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 5    NRRAEHLPQSTNQAMPPKRKSPVATAALPAMPPRMTRSMAAG 130
            N+  +H PQ +    PP+   P      PA PPR   S  +G
Sbjct: 1211 NQPHQHPPQPSQPPQPPQPAQPTRPGGAPAAPPRGAGSQGSG 1252



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>Q91848:SIAM_XENLA Homeobox protein siamois - Xenopus laevis (African clawed frog)|
          Length = 246

 Score = 30.8 bits (68), Expect = 7.0
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 2   ENRRAEHLPQSTNQAMPPKRKSPVA 76
           +NRRA HLP++T    P  RKSP +
Sbjct: 191 QNRRARHLPRATTFHSPQGRKSPTS 215



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>Q7M8H5:LEPA_WOLSU GTP-binding protein lepA - Wolinella succinogenes|
          Length = 596

 Score = 30.8 bits (68), Expect = 7.0
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -3

Query: 742 TLIPHYTAT--ASLQYQVPTQNKP*TSIAKGGHPYINAT-SDSSDFLGNVL 599
           T+I H T T  + +  Q P++  P   IAK   PY+ AT    S++LGNV+
Sbjct: 369 TVIYHLTLTDGSEVSVQNPSELPPEQKIAKMEEPYVRATIIVPSEYLGNVI 419



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>Q4WP03:VID21_ASPFU Chromatin modification-related protein vid21 - Aspergillus|
           fumigatus (Sartorya fumigata)
          Length = 1467

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 53  PKRKSPVATAALPAMPPRMTRSMAAG 130
           P  K P A A LPA P RMT  +++G
Sbjct: 413 PAGKKPTAAAVLPAQPERMTTRVSSG 438


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 111,603,431
Number of extensions: 2320506
Number of successful extensions: 6003
Number of sequences better than 10.0: 5
Number of HSP's gapped: 6001
Number of HSP's successfully gapped: 5
Length of query: 281
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 169
Effective length of database: 69,965,399
Effective search space: 11824152431
Effective search space used: 11824152431
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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