ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf80g05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066474:Os08g0359000 | 258 | 4e-82 | 2 | AK111708:Os01g0515300 | 32 | 0.62 | 3 | Os02g0168400:Os02g0168400 | 29 | 6.8 | 4 | AK107033:Os01g0632700 | 28 | 8.9 | 5 | AK103861:Os05g0207700 | 28 | 8.9 | 6 | AK102919:Os04g0418800 | 28 | 8.9 | 7 | AK102665:Os05g0207700 | 28 | 8.9 | 8 | AK070692:Os01g0632700 | 28 | 8.9 | 9 | AF318582:Os01g0239000 | 28 | 9.0 | 10 | AK121019:Os01g0239000 | 28 | 9.0 |
|---|
>AK066474:Os08g0359000 | Length = 271 Score = 258 bits (660), Expect(2) = 4e-82 Identities = 132/165 (80%), Positives = 138/165 (83%), Gaps = 1/165 (0%) Frame = +1 Query: 301 KAVIPDDEFTLAKXXXXXXXXXXXXXXXXXXXXAYFNLLPGSEWSALMLTYGFPLTIIGM 480 KAV+PD+EFTLAK AYFNLLPGSEWSALMLTYGFPLTIIGM Sbjct: 75 KAVVPDEEFTLAKVSFGVIGLGVGGTLLSYGFGAYFNLLPGSEWSALMLTYGFPLTIIGM 134 Query: 481 ALKYAELKPVPCITYSDAFALREKCATPILKQVRSDVTRYRYGDEQHLDEALKRIFQYGL 660 ALKYAELKPVPC TY+DAFALREKCATPIL QVRSDVTRYRYGDEQHLDEALKRIFQYGL Sbjct: 135 ALKYAELKPVPCTTYADAFALREKCATPILNQVRSDVTRYRYGDEQHLDEALKRIFQYGL 194 Query: 661 GGGIPRRSAPILQKI-QEVTDDGKYCLVLEFEAKSLGLSDFEKRQ 792 GGGIPRRSAPILQ I +EVTDDGKY LVL FEAK+L +SDFEKRQ Sbjct: 195 GGGIPRRSAPILQNIREEVTDDGKYSLVLVFEAKALEISDFEKRQ 239 Score = 65.5 bits (158), Expect(2) = 4e-82 Identities = 30/33 (90%), Positives = 33/33 (100%) Frame = +3 Query: 786 EAKFTSFFGPGIEAKIGKGGDDLYEVRLISETT 884 +AKFTSFFGPGI+A+IGKGGDDLYEVRLISETT Sbjct: 239 QAKFTSFFGPGIKAEIGKGGDDLYEVRLISETT 271
>AK111708:Os01g0515300 | Length = 559 Score = 32.3 bits (72), Expect = 0.62 Identities = 24/73 (32%), Positives = 31/73 (42%) Frame = +1 Query: 424 SEWSALMLTYGFPLTIIGMALKYAELKPVPCITYSDAFALREKCATPILKQVRSDVTRYR 603 S WSAL TYG+ I L Y L C YS + E ++S +T + Sbjct: 450 SNWSALAGTYGY----IAPELSYTSLVTEKCDVYSFGVVVLEVLMGKHPGDIQSSITTSK 505 Query: 604 YGDEQHLDEALKR 642 Y D LDE L + Sbjct: 506 YDD--FLDEILDK 516
>Os02g0168400:Os02g0168400 | Length = 962 Score = 28.9 bits (63), Expect = 6.8 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 35/103 (33%) Frame = -3 Query: 229 RCDSYGMA*-------GKHFSP------------GGGRRMAPGAQQ-------------- 149 RC+S+ +A G+H SP GGG A GA Sbjct: 27 RCESHALAAAPRRARSGRHASPPPQRVAPEEEDDGGGGAAAVGAVVAMLSGYVGRFVKDE 86 Query: 148 --EPGVSLQCTAETCLSPSAARRGTATSV*INLDNLSLGSECL 26 G+ +C A CL+P+A+RRG +V L NL LG E + Sbjct: 87 GFRRGLREKCAA--CLAPAASRRGAGHAV---LANLELGIESI 124
>AK107033:Os01g0632700 | Length = 186 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 398 PNPYDKREPPIPSPITPKDTLARVNSSSG 312 P+P D R PP P+P + + ++ +S+SG Sbjct: 73 PSPVDPRPPPQPTPSSAQTPISVASSTSG 101
>AK103861:Os05g0207700 | Length = 424 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -3 Query: 904 KRCHSSSVVSEIRRTSYRSSPPFPILASIPGPKKEVNFASSQNLIAPTIWLQIPVLNSIS 725 +R HS + RR+S S PP P +P P N APT+ + P NS S Sbjct: 49 RRLHSLDLPKHHRRSSSSSPPPMP--PPLPPPPPSAN--------APTLGKESPSSNSAS 98
>AK102919:Os04g0418800 | Length = 360 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -2 Query: 398 PNPYDKREPPIPSPITPKDT 339 P PY + P PSP TPK T Sbjct: 312 PTPYKPQPKPTPSPYTPKPT 331
>AK102665:Os05g0207700 | Length = 424 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -3 Query: 904 KRCHSSSVVSEIRRTSYRSSPPFPILASIPGPKKEVNFASSQNLIAPTIWLQIPVLNSIS 725 +R HS + RR+S S PP P +P P N APT+ + P NS S Sbjct: 49 RRLHSLDLPKHHRRSSSSSPPPMP--PPLPPPPPSAN--------APTLGKESPSSNSAS 98
>AK070692:Os01g0632700 | Length = 147 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 398 PNPYDKREPPIPSPITPKDTLARVNSSSG 312 P+P D R PP P+P + + ++ +S+SG Sbjct: 33 PSPVDPRPPPQPTPSSAQTPISVASSTSG 61
>AF318582:Os01g0239000 | Length = 417 Score = 28.5 bits (62), Expect = 9.0 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 183 AAGGGWRRERSKSPE*VCSALQRHVSLPPPHVAA 82 AAGGG R++ + + V + + PPPH AA Sbjct: 178 AAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAA 211
>AK121019:Os01g0239000 | Length = 539 Score = 28.5 bits (62), Expect = 9.0 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 183 AAGGGWRRERSKSPE*VCSALQRHVSLPPPHVAA 82 AAGGG R++ + + V + + PPPH AA Sbjct: 300 AAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAA 333 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,329,917 Number of extensions: 746771 Number of successful extensions: 2721 Number of sequences better than 10.0: 10 Number of HSP's gapped: 2715 Number of HSP's successfully gapped: 11 Length of query: 371 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 269 Effective length of database: 11,315,673 Effective search space: 3043916037 Effective search space used: 3043916037 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
