ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf80g05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q58D65:TYW2_BOVIN tRNA wybutosine-synthesizing protein 2 homolog... 32 3.6
2Q9NRI5:DISC1_HUMAN Disrupted in schizophrenia 1 protein - Homo s... 32 4.7

>Q58D65:TYW2_BOVIN tRNA wybutosine-synthesizing protein 2 homolog - Bos taurus|
           (Bovine)
          Length = 438
 Score = 32.3 bits (72), Expect = 3.6
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +3

Query: 27  KHSL--PKDKLSRLIYTLVAVP-RRAAEGERHVSAVHCKLTPGSCCAPGAILLPPPGEKC 197
           KH L   + ++ +L    VA+P  R A  E+H+  +  ++ PGS C P  +L P P +K 
Sbjct: 30  KHKLLDRQHRVKKLRDGTVALPVLREALLEQHLRELRNRVAPGSTCVPTQLLDPVPSKKA 89

Query: 198 FPYA 209
             Y+
Sbjct: 90  QSYS 93



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>Q9NRI5:DISC1_HUMAN Disrupted in schizophrenia 1 protein - Homo sapiens (Human)|
          Length = 854

 Score = 32.0 bits (71), Expect = 4.7
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
 Frame = -3

Query: 187 PGGGRRMAPGAQQEPGVSLQCTAETCLSPSA-------ARR----GTATSV*INLDNLSL 41
           PGGG + AP A    GVS +  +  CL P+A       ARR     ++T   I   + ++
Sbjct: 2   PGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPAV 61

Query: 40  GSECLFPGNFSG 5
           G+   FPG  SG
Sbjct: 62  GTLFRFPGGVSG 73


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 188,011,352
Number of extensions: 4155041
Number of successful extensions: 12734
Number of sequences better than 10.0: 2
Number of HSP's gapped: 12724
Number of HSP's successfully gapped: 2
Length of query: 371
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 256
Effective length of database: 69,142,514
Effective search space: 17700483584
Effective search space used: 17700483584
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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