| Clone Name | FLbaf74k15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY650053.1| Triticum monococcum pathogenesis-related protein 4 (PR-4) mRNA, complete cds Length = 657 Score = 438 bits (221), Expect = e-119 Identities = 362/409 (88%) Strand = Plus / Plus Query: 134 gtcctgctgtgcgcgttggccgccatggccgcggcgcagtcggcgtccaacgtgcgcgcc 193 ||||||||| ||||| ||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 111 gtcctgctgagcgcggcggctgccatggcggcggcgcagtcggcgtcgaacgtgcgcgcc 170 Query: 194 acctacaacttatacagcccgcagaagaacaactgggacctcaacaccgccggcgtctac 253 |||||||||| ||||||||| |||||| |||||||||||||||| ||||| ||| |||| Sbjct: 171 acctacaactactacagcccggagaagatcaactgggacctcaacgccgccagcgcctac 230 Query: 254 tgcgccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggaccgcc 313 |||||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||| Sbjct: 231 tgcgccacctgggacgccggcatgtcgtacgcctggcgctccaagtacggctggacggcc 290 Query: 314 ttctgcgggcccgccgggcccatcggccaggcatcttgcggcaagtgcatccaggtgaca 373 |||||||| ||||||||||| | ||||||||| || |||||||||||| ||| |||||| Sbjct: 291 ttctgcggccccgccgggccgaccggccaggcgtcctgcggcaagtgcctcctggtgacg 350 Query: 374 aacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagcaacggcggt 433 ||||||||||| || || ||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 351 aacacggcgaccggcgcgcagatcacggcgaggatcgtcgaccagtgtagcaacggcggg 410 Query: 434 ctagacctggacttagacacggtgttcagcaagatcgacaccgacggagtgggtatgcag 493 || ||||||||||| |||||||||||||||||||||||||||||||| ||| || Sbjct: 411 ctggacctggacttcgacacggtgttcagcaagatcgacaccgacggccagggcgtggcc 470 Query: 494 cagggccacctcactgtcaactaccagtttgtcgactgtggcgacaact 542 || ||||||||||| |||||||||||||| |||||||| |||||||||| Sbjct: 471 caaggccacctcaccgtcaactaccagttcgtcgactgcggcgacaact 519
>gb|AY104854.1| Zea mays PCO080661 mRNA sequence Length = 751 Score = 218 bits (110), Expect = 2e-53 Identities = 332/406 (81%) Strand = Plus / Plus Query: 137 ctgctgtgcgcgttggccgccatggccgcggcgcagtcggcgtccaacgtgcgcgccacc 196 |||||||||||| ||| ||||||||| |||||||| ||| ||| ||||||||||||| Sbjct: 137 ctgctgtgcgcggcggcggccatggccacggcgcagcaggcctccggcgtgcgcgccacc 196 Query: 197 tacaacttatacagcccgcagaagaacaactgggacctcaacaccgccggcgtctactgc 256 |||||||| |||| ||||||| |||||||||||||||||||| ||| ||| |||||| Sbjct: 197 tacaacttctacaacccgcagcagaacaactgggacctcaacgccgtgagcgcgtactgc 256 Query: 257 gccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggaccgccttc 316 || || ||||||||| ||| | | || | |||||| |||||||||||||| |||||| Sbjct: 257 gcgacgtgggacgccagcaagccgctgtcgtggcgcatgaagtacggctggacggccttc 316 Query: 317 tgcgggcccgccgggcccatcggccaggcatcttgcggcaagtgcatccaggtgacaaac 376 |||||||||||||| |||| ||||||||| | ||||| |||| ||| |||||| ||| Sbjct: 317 tgcgggcccgccggccccaccggccaggccgcgtgcgggcagtgtctcctggtgaccaac 376 Query: 377 acggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagcaacggcggtcta 436 |||||||||||||| || |||| ||||||||| ||| |||||||||||||||| || Sbjct: 377 acggcgacgggggcgtccatcacggtgaggatcgtggaccagtgcagcaacggcggcctg 436 Query: 437 gacctggacttagacacggtgttcagcaagatcgacaccgacggagtgggtatgcagcag 496 |||||||||| ||||||| ||||| ||||||||| |||| ||| | ||| Sbjct: 437 gacctggactacgacacggcgttcaagcccatcgacaccaacggccagggcttccaggcc 496 Query: 497 ggccacctcactgtcaactaccagtttgtcgactgtggcgacaact 542 ||||||||||| |||||||||||||| ||| |||| |||||||||| Sbjct: 497 ggccacctcaccgtcaactaccagttcgtcaactgcggcgacaact 542
>emb|AM116978.1| Triticum aestivum wPR4g gene for putative vacuolar defense protein Length = 788 Score = 182 bits (92), Expect = 1e-42 Identities = 242/292 (82%) Strand = Plus / Plus Query: 250 ctactgcgccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggac 309 ||||||| |||| ||||||||||||| | | || | ||||| ||||||||||||||||| Sbjct: 208 ctactgctccacctgggacgccggcaagccgttctcgtggcggtccaagtacggctggac 267 Query: 310 cgccttctgcgggcccgccgggcccatcggccaggcatcttgcggcaagtgcatccaggt 369 || |||||||| |||||||| ||| ||||||||| || ||||| |||||||| ||| Sbjct: 268 ggcgttctgcggccccgccggcccccgcggccaggcgtcgtgcgggcggtgcatccgggt 327 Query: 370 gacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagcaacgg 429 ||| ||||||| |||||||| ||||| || ||||||||||| ||| ||||| |||||| Sbjct: 328 gaccaacacgggcacgggggcgcagatcacagcgaggatcgtggaccagtgcgccaacgg 387 Query: 430 cggtctagacctggacttagacacggtgttcagcaagatcgacaccgacggagtgggtat 489 ||| || ||||| |||| |||||||||||| |||||||||||||||||| |||| Sbjct: 388 cgggctggacctcgactgggacacggtgttcgtcaagatcgacaccgacggcatggggta 447 Query: 490 gcagcagggccacctcactgtcaactaccagtttgtcgactgtggcgacaac 541 ||| ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 448 ccagaggggccacctcatcgtcaactaccagttcgtcgactgcggcgacaac 499
>emb|AJ006099.1|TAE6099 Triticum aestivum WPR4b gene Length = 604 Score = 174 bits (88), Expect = 3e-40 Identities = 239/284 (84%), Gaps = 4/284 (1%) Strand = Plus / Plus Query: 250 ctactgcgccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggac 309 ||||||||| || ||||||||| ||| | | || | ||||| ||||||||||| ||||| Sbjct: 209 ctactgcgcgacctgggacgccagcaagccgctgtcgtggcggtccaagtacgggtggac 268 Query: 310 cgccttctgcgggcccgccgg-gcccatcggccaggcatcttgcggcaagtgcatccagg 368 || |||||||| |||||||| ||||| ||| ||||| | |||||||||||| ||| || Sbjct: 269 ggcgttctgcggccccgccggcgccca-cgggcaggcggcgtgcggcaagtgcctccggg 327 Query: 369 tgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagcaacg 428 |||| ||| ||||||||||||| ||||| |||||||||||||||||| ||||| ||||| Sbjct: 328 tgacgaacccggcgacgggggcgcagatcacggcgaggatcgtcgaccagtgcgccaacg 387 Query: 429 gcggtctagacctggacttagacacggtgttcagcaagatcgacaccgac-ggagtgggt 487 |||| || |||||||||| ||||| || |||| ||||||||||||| || ||| |||| Sbjct: 388 gcgggctggacctggactgggacaccgtcttcaccaagatcgacaccaacgggatcgggt 447 Query: 488 atgcagcagggccacctcactgtcaactaccagtttgtcgactg 531 | |||||||||||||||| |||||||||||||| |||||||| Sbjct: 448 a-ccagcagggccacctcaacgtcaactaccagttcgtcgactg 490
>emb|AJ006098.1|TAE6098 Triticum aestivum wPR4a gene Length = 751 Score = 174 bits (88), Expect = 3e-40 Identities = 239/284 (84%), Gaps = 4/284 (1%) Strand = Plus / Plus Query: 250 ctactgcgccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggac 309 ||||||||| || ||||||||| ||| | | || | ||||| ||||||||||| ||||| Sbjct: 221 ctactgcgcaacctgggacgccagcaagccgctgtcgtggcggtccaagtacgggtggac 280 Query: 310 cgccttctgcgggcccgccgg-gcccatcggccaggcatcttgcggcaagtgcatccagg 368 || |||||||| |||||||| ||||| ||| ||||| || |||||||||||| |||||| Sbjct: 281 ggcgttctgcggccccgccggcgccca-cgggcaggcgtcctgcggcaagtgcctccagg 339 Query: 369 tgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagcaacg 428 |||| ||| ||||||||||||| ||||| |||||||||||||| ||| ||||| ||||| Sbjct: 340 tgaccaacccggcgacgggggcgcagatcacggcgaggatcgtggaccagtgcgccaacg 399 Query: 429 gcggtctagacctggacttagacacggtgttcagcaagatcgacaccgac-ggagtgggt 487 |||| || |||||||||| ||||| || |||| ||||||||||||| || ||| |||| Sbjct: 400 gcgggctggacctggactgggacaccgtcttcaccaagatcgacaccaacgggatcgggt 459 Query: 488 atgcagcagggccacctcactgtcaactaccagtttgtcgactg 531 | |||||||||||||| | |||||||||||||| |||||||| Sbjct: 460 a-ccagcagggccaccttaacgtcaactaccagttcgtcgactg 502
>emb|Y10814.1|HVPRP4 H.vulgare mRNA for pathogenic related protein 4 Length = 728 Score = 168 bits (85), Expect = 2e-38 Identities = 199/237 (83%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgggcccgccgggcccatcggccaggcatcttgcgg 354 ||||||||||||||| || |||||||| |||||||| ||| |||| ||||| | ||||| Sbjct: 276 caagtacggctggacggcgttctgcggccccgccggccccctcgggcaggcggcctgcgg 335 Query: 355 caagtgcatccaggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcga 414 |||||| ||| |||||| ||| ||||||||||||| ||||| |||||||||||||| || Sbjct: 336 taagtgcctccgggtgaccaacccggcgacgggggcgcagatcacggcgaggatcgtgga 395 Query: 415 caagtgcagcaacggcggtctagacctggacttagacacggtgttcagcaagatcgacac 474 ||||||| ||||||||| || ||||| |||| ||||| || ||| |||||||||||| Sbjct: 396 caagtgcgccaacggcgggctcgacctcgactgggacaccgtcttcgccaagatcgacac 455 Query: 475 cgacggagtgggtatgcagcagggccacctcactgtcaactaccagtttgtcgactg 531 | |||| | || | |||||||||||||||| |||||||||||||| |||||||| Sbjct: 456 caacgggatcgggttccagcagggccacctcaacgtcaactaccagttcgtcgactg 512
>gb|AY573795.1| Triticum aestivum putative vacuolar defense protein (PR4e) gene, complete cds Length = 3257 Score = 167 bits (84), Expect = 7e-38 Identities = 240/292 (82%) Strand = Plus / Plus Query: 250 ctactgcgccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggac 309 ||||||| |||| ||||||||||||| | | | | ||||| |||| |||||||||||| Sbjct: 1853 ctactgctccacctgggacgccggcaagccgtactcgtggcggtccaggtacggctggac 1912 Query: 310 cgccttctgcgggcccgccgggcccatcggccaggcatcttgcggcaagtgcatccaggt 369 || |||||||| |||||||| ||| ||||||||| || ||||| |||||||| ||| Sbjct: 1913 ggcgttctgcggccccgccggcccccgcggccaggcgtcctgcgggcggtgcatccgggt 1972 Query: 370 gacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagcaacgg 429 ||| ||||||| |||||||| ||||| |||||||||||||| ||| ||||| |||||| Sbjct: 1973 gaccaacacgggcacgggggcgcagatcacggcgaggatcgtggaccagtgcgccaacgg 2032 Query: 430 cggtctagacctggacttagacacggtgttcagcaagatcgacaccgacggagtgggtat 489 ||| || ||||| |||| |||||||||||| |||||||||||||||||| |||| Sbjct: 2033 cgggctggacctcgactgggacacggtgttcgtcaagatcgacaccgacggcatggggta 2092 Query: 490 gcagcagggccacctcactgtcaactaccagtttgtcgactgtggcgacaac 541 ||| ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 2093 ccagaggggccacctcatcgtcaactaccagttcgtcgactgccgcgacaac 2144
>gb|AF093006.1|AF093006 Triticum aestivum clone wPR4-6 PR-4 mRNA, partial cds Length = 360 Score = 159 bits (80), Expect = 2e-35 Identities = 196/232 (84%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 250 ctactgcgccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggac 309 ||||||||| || ||||||||| ||| | | || | ||||| ||||||||||| ||||| Sbjct: 66 ctactgcgcaacctgggacgccagcaagccgctgtcgtggcggtccaagtacgggtggac 125 Query: 310 cgccttctgcgggcccgccgg-gcccatcggccaggcatcttgcggcaagtgcatccagg 368 || |||||||| |||||||| ||||| ||| ||||| || |||||||||||| |||||| Sbjct: 126 ggcgttctgcggccccgccggcgccca-cgggcaggcgtcctgcggcaagtgcctccagg 184 Query: 369 tgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagcaacg 428 |||| ||| ||||||||||||| ||||| |||||||||||||| ||| ||||| ||||| Sbjct: 185 tgaccaacccggcgacgggggcgcagatcacggcgaggatcgtggaccagtgcgccaacg 244 Query: 429 gcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacgg 480 |||| || |||||||||| ||||| || |||| ||||||||||||| |||| Sbjct: 245 gcgggctggacctggactgggacaccgtcttcaccaagatcgacaccaacgg 296
>emb|CT834035.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA224B09, full insert sequence Length = 739 Score = 149 bits (75), Expect = 2e-32 Identities = 204/247 (82%) Strand = Plus / Plus Query: 296 aagtacggctggaccgccttctgcgggcccgccgggcccatcggccaggcatcttgcggc 355 ||||| |||||||| ||||| |||||||||| || || | || ||||| | || ||| Sbjct: 272 aagtatggctggactgccttttgcgggcccgttggtcctaggggtcaggctgcatgtggc 331 Query: 356 aagtgcatccaggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgac 415 |||||| ||| |||||| ||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 332 aagtgcctcctggtgacgaacacggcgacgggggcgcagatcacggcgaggatcgtggac 391 Query: 416 aagtgcagcaacggcggtctagacctggacttagacacggtgttcagcaagatcgacacc 475 ||||| ||| ||||| || |||||||||| ||||| ||||||| ||||||||||||| Sbjct: 392 cagtgcgccaatggcggccttgacctggactgggacaccgtgttcaccaagatcgacacc 451 Query: 476 gacggagtgggtatgcagcagggccacctcactgtcaactaccagtttgtcgactgtggc 535 ||||| ||| ||| |||||||||||| ||||||||| |||| |||||||| ||| Sbjct: 452 gacggccagggctaccagaagggccacctcatcgtcaactacaagttcgtcgactgcggc 511 Query: 536 gacaact 542 ||||||| Sbjct: 512 gacaact 518 Score = 44.1 bits (22), Expect = 0.68 Identities = 49/58 (84%) Strand = Plus / Plus Query: 138 tgctgtgcgcgttggccgccatggccgcggcgcagtcggcgtccaacgtgcgcgccac 195 ||||||||||| ||| |||||||| | | |||||| ||| |||||||| |||||||| Sbjct: 108 tgctgtgcgcggtggtcgccatggtcacagcgcaggaggcatccaacgtacgcgccac 165
>gb|AF093007.1|AF093007 Triticum aestivum clone wPR4-8 PR-4 mRNA, partial cds Length = 360 Score = 143 bits (72), Expect = 1e-30 Identities = 194/232 (83%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 250 ctactgcgccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggac 309 ||||||||| || ||||||||| ||| | | || | ||||| ||||||||||| ||||| Sbjct: 66 ctactgcgcgacctgggacgccagcaagccgctgtcgtggcggtccaagtacgggtggac 125 Query: 310 cgccttctgcgggcccgccgg-gcccatcggccaggcatcttgcggcaagtgcatccagg 368 || |||||||| |||||||| ||||| ||| ||||| | |||||||||||| ||| || Sbjct: 126 ggcgttctgcggccccgccggcgccca-cgggcaggcggcgtgcggcaagtgcctccggg 184 Query: 369 tgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagcaacg 428 |||| ||| ||||||||||||| ||||| |||||||||||||| ||| ||||| ||||| Sbjct: 185 tgacgaacccggcgacgggggcgcagatcacggcgaggatcgtggaccagtgcgccaacg 244 Query: 429 gcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacgg 480 |||| || |||||||||| ||||| || |||| ||||||||||||| |||| Sbjct: 245 gcgggctggacctggactgggacaccgtcttcaccaagatcgacaccaacgg 296
>gb|AF092123.1|AF092123 Triticum aestivum pathogenesis-related protein 4 (PR4) mRNA, partial cds Length = 360 Score = 135 bits (68), Expect = 2e-28 Identities = 193/232 (83%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 250 ctactgcgccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggac 309 ||||||||| || ||||||||| ||| | | || | ||||| ||||||||||| ||||| Sbjct: 66 ctactgcgcaacctgggacgccagcaagccgctgtcgtggcggtccaagtacgggtggac 125 Query: 310 cgccttctgcgggcccgccgg-gcccatcggccaggcatcttgcggcaagtgcatccagg 368 || |||||||| |||||||| ||||| ||| ||||| | |||||||||||| ||| || Sbjct: 126 ggcgttctgcggccccgccggcgccca-cgggcaggcggcgtgcggcaagtgcctccggg 184 Query: 369 tgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagcaacg 428 |||| ||| ||||||||||||| ||| | |||||||||||||| ||| ||||| ||||| Sbjct: 185 tgacgaacccggcgacgggggcgcaggtgacggcgaggatcgtggaccagtgcgccaacg 244 Query: 429 gcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacgg 480 |||| || |||||||||| ||||| || |||| ||||||||||||| |||| Sbjct: 245 gcgggctggacctggactgggacaccgtcttcaccaagatcgacaccaacgg 296
>ref|NM_001074720.1| Oryza sativa (japonica cultivar-group) Os11g0592000 (Os11g0592000) mRNA, complete cds Length = 743 Score = 133 bits (67), Expect = 1e-27 Identities = 202/247 (81%) Strand = Plus / Plus Query: 296 aagtacggctggaccgccttctgcgggcccgccgggcccatcggccaggcatcttgcggc 355 ||||| |||||||| ||||| |||||||||| || || | || ||||| | || ||| Sbjct: 275 aagtatggctggactgccttttgcgggcccgttggtcctaggggtcaggctgcatgtggc 334 Query: 356 aagtgcatccaggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgac 415 |||||| | | |||||| ||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 335 aagtgccttctggtgacgaacacggcgacgggggcgcagatcacggcgaggatcgtggac 394 Query: 416 aagtgcagcaacggcggtctagacctggacttagacacggtgttcagcaagatcgacacc 475 ||||| ||| ||||| || |||||||||| ||||| || |||| ||||||||||||| Sbjct: 395 cagtgcgccaatggcggccttgacctggactgggacaccgtcttcaccaagatcgacacc 454 Query: 476 gacggagtgggtatgcagcagggccacctcactgtcaactaccagtttgtcgactgtggc 535 ||||| ||| ||| |||||||||||| ||||||||| |||| |||||||| ||| Sbjct: 455 gacggccagggctaccagaagggccacctcatcgtcaactacaagttcgtcgactgcggc 514 Query: 536 gacaact 542 ||||||| Sbjct: 515 gacaact 521 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 138 tgctgtgcgcgttggccgccatggccgcggcgcagtcggcgtccaacgtgcgcgccac 195 ||||||||||| ||| |||||||| | | |||||| ||| ||||||||||||||||| Sbjct: 111 tgctgtgcgcggtggtcgccatggtcacagcgcaggaggcatccaacgtgcgcgccac 168
>dbj|AK121059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056K07, full insert sequence Length = 744 Score = 133 bits (67), Expect = 1e-27 Identities = 202/247 (81%) Strand = Plus / Plus Query: 296 aagtacggctggaccgccttctgcgggcccgccgggcccatcggccaggcatcttgcggc 355 ||||| |||||||| ||||| |||||||||| || || | || ||||| | || ||| Sbjct: 276 aagtatggctggactgccttttgcgggcccgttggtcctaggggtcaggctgcatgtggc 335 Query: 356 aagtgcatccaggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgac 415 |||||| | | |||||| ||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 336 aagtgccttctggtgacgaacacggcgacgggggcgcagatcacggcgaggatcgtggac 395 Query: 416 aagtgcagcaacggcggtctagacctggacttagacacggtgttcagcaagatcgacacc 475 ||||| ||| ||||| || |||||||||| ||||| || |||| ||||||||||||| Sbjct: 396 cagtgcgccaatggcggccttgacctggactgggacaccgtcttcaccaagatcgacacc 455 Query: 476 gacggagtgggtatgcagcagggccacctcactgtcaactaccagtttgtcgactgtggc 535 ||||| ||| ||| |||||||||||| ||||||||| |||| |||||||| ||| Sbjct: 456 gacggccagggctaccagaagggccacctcatcgtcaactacaagttcgtcgactgcggc 515 Query: 536 gacaact 542 ||||||| Sbjct: 516 gacaact 522 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 138 tgctgtgcgcgttggccgccatggccgcggcgcagtcggcgtccaacgtgcgcgccac 195 ||||||||||| ||| |||||||| | | |||||| ||| ||||||||||||||||| Sbjct: 112 tgctgtgcgcggtggtcgccatggtcacagcgcaggaggcatccaacgtgcgcgccac 169
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 131 bits (66), Expect = 4e-27 Identities = 150/178 (84%) Strand = Plus / Plus Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagc 424 |||||||| ||||||||||||||||| ||||| |||||||||||||| ||| ||||| | Sbjct: 542 caggtgacgaacacggcgacgggggcgcagatcacggcgaggatcgtggaccagtgcgcc 601 Query: 425 aacggcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacggagtg 484 || ||||| || |||||||||| ||||| || |||| |||||||||||||||||| | Sbjct: 602 aatggcggccttgacctggactgggacaccgtcttcaccaagatcgacaccgacggccag 661 Query: 485 ggtatgcagcagggccacctcactgtcaactaccagtttgtcgactgtggcgacaact 542 || ||| |||||||||||| ||||||||| |||| |||||||| |||||||||| Sbjct: 662 ggctaccagaagggccacctcatcgtcaactacaagttcgtcgactgcggcgacaact 719 Score = 58.0 bits (29), Expect = 5e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgc 421 |||||||| ||||||||||| |||| ||||| |||||||||||||| ||| ||||| Sbjct: 5043 caggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgc 5099 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 138 tgctgtgcgcgttggccgccatggccgcggcgcagtcggcgtccaacgtgcgcgccac 195 ||||||||||| ||| |||||||| | | |||||| ||| ||||||||||||||||| Sbjct: 136 tgctgtgcgcggtggtcgccatggtcacagcgcaggaggcatccaacgtgcgcgccac 193
>gb|AC146765.1| Oryza sativa (japonica cultivar-group) chromosome 11 plasmid clone B1008D06_A01, complete sequence Length = 3323 Score = 131 bits (66), Expect = 4e-27 Identities = 150/178 (84%) Strand = Plus / Minus Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagc 424 |||||||| ||||||||||||||||| ||||| |||||||||||||| ||| ||||| | Sbjct: 607 caggtgacgaacacggcgacgggggcgcagatcacggcgaggatcgtggaccagtgcgcc 548 Query: 425 aacggcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacggagtg 484 || ||||| || |||||||||| ||||| || |||| |||||||||||||||||| | Sbjct: 547 aatggcggccttgacctggactgggacaccgtcttcaccaagatcgacaccgacggccag 488 Query: 485 ggtatgcagcagggccacctcactgtcaactaccagtttgtcgactgtggcgacaact 542 || ||| |||||||||||| ||||||||| |||| |||||||| |||||||||| Sbjct: 487 ggctaccagaagggccacctcatcgtcaactacaagttcgtcgactgcggcgacaact 430 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagc 424 |||||||| || | || |||||| || |||| ||||||||||| || ||||||||| | Sbjct: 3191 caggtgacgaatagggtgacgggagcccagaccacggcgaggattgtggacaagtgcgcc 3132 Query: 425 aacggcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacgg 480 ||||| || ||||| ||||||| ||||| || ||| |||||||||||| ||||| Sbjct: 3131 aacggaggactagatctggactgggacactgtcttctccaagatcgacactgacgg 3076 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Minus Query: 138 tgctgtgcgcgttggccgccatggccgcggcgcagtcggcgtccaacgtgcgcgccac 195 ||||||||||| ||| |||||||| | | |||||| ||| ||||||||||||||||| Sbjct: 1013 tgctgtgcgcggtggtcgccatggtcacagcgcaggaggcatccaacgtgcgcgccac 956
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 131 bits (66), Expect = 4e-27 Identities = 150/178 (84%) Strand = Plus / Plus Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagc 424 |||||||| ||||||||||||||||| ||||| |||||||||||||| ||| ||||| | Sbjct: 21648489 caggtgacgaacacggcgacgggggcgcagatcacggcgaggatcgtggaccagtgcgcc 21648548 Query: 425 aacggcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacggagtg 484 || ||||| || |||||||||| ||||| || |||| |||||||||||||||||| | Sbjct: 21648549 aatggcggccttgacctggactgggacaccgtcttcaccaagatcgacaccgacggccag 21648608 Query: 485 ggtatgcagcagggccacctcactgtcaactaccagtttgtcgactgtggcgacaact 542 || ||| |||||||||||| ||||||||| |||| |||||||| |||||||||| Sbjct: 21648609 ggctaccagaagggccacctcatcgtcaactacaagttcgtcgactgcggcgacaact 21648666 Score = 58.0 bits (29), Expect = 5e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgc 421 |||||||| ||||||||||| |||| ||||| |||||||||||||| ||| ||||| Sbjct: 21652990 caggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgc 21653046 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagc 424 |||||||| || | || |||||| || |||| ||||||||||| || ||||||||| | Sbjct: 21645905 caggtgacgaatagggtgacgggagcccagaccacggcgaggattgtggacaagtgcgcc 21645964 Query: 425 aacggcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacgg 480 ||||| || ||||| ||||||| ||||| || ||| |||||||||||| ||||| Sbjct: 21645965 aacggaggactagatctggactgggacactgtcttctccaagatcgacactgacgg 21646020 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 138 tgctgtgcgcgttggccgccatggccgcggcgcagtcggcgtccaacgtgcgcgccac 195 ||||||||||| ||| |||||||| | | |||||| ||| ||||||||||||||||| Sbjct: 21648083 tgctgtgcgcggtggtcgccatggtcacagcgcaggaggcatccaacgtgcgcgccac 21648140
>emb|X82184.1|ZMDRP Z.mays mRNA for defense-related protein Length = 748 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 400 ggcgaggatcgtcgacaagtgcagcaacggcggtctagacctggacttagacacggtgtt 459 |||||||||||| ||| |||||||||||||||| || |||||||||| || |||||||| Sbjct: 404 ggcgaggatcgtggaccagtgcagcaacggcggcctggacctggactacgagacggtgtt 463 Query: 460 cagcaagatcgacaccgacgg 480 || |||||||||||| |||| Sbjct: 464 caagaagatcgacaccaacgg 484 Score = 58.0 bits (29), Expect = 5e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 300 acggctggaccgccttctgcgggcccgccgggc 332 |||||||||| |||||||||||||||||||||| Sbjct: 304 acggctggacggccttctgcgggcccgccgggc 336
>gb|AY103826.1| Zea mays PCO105158 mRNA sequence Length = 927 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 400 ggcgaggatcgtcgacaagtgcagcaacggcggtctagacctggacttagacacggtgtt 459 |||||||||||| ||| |||||||||||||||| || |||||||||| || |||||||| Sbjct: 429 ggcgaggatcgtggaccagtgcagcaacggcggcctggacctggactacgagacggtgtt 488 Query: 460 cagcaagatcgacaccgacgg 480 || |||||||||||| |||| Sbjct: 489 caagaagatcgacaccaacgg 509 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 300 acggctggaccgccttctgcgggcccgccgggcccatcggccaggcatcttgcggcaagt 359 |||||||||| |||||||||||||||||||||| | |||||||| | |||||||||| Sbjct: 329 acggctggacggccttctgcgggcccgccgggcagaagggccaggccgcctgcggcaagt 388 Query: 360 gcat 363 |||| Sbjct: 389 gcat 392
>ref|NM_001074719.1| Oryza sativa (japonica cultivar-group) Os11g0591800 (Os11g0591800) mRNA, complete cds Length = 477 Score = 63.9 bits (32), Expect = 7e-07 Identities = 140/176 (79%) Strand = Plus / Plus Query: 305 tggaccgccttctgcgggcccgccgggcccatcggccaggcatcttgcggcaagtgcatc 364 ||||| |||||||| ||||||| ||||||| |||| || || ||||||||||| | Sbjct: 214 tggacggccttctgtgggcccgttgggcccaccggcagggactcctgcggcaagtgtctt 273 Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagc 424 | |||||| || | || |||||| || |||| ||||||||||| || ||||||||| | Sbjct: 274 cgggtgacgaatagggtgacgggagcccagaccacggcgaggattgtggacaagtgcgcc 333 Query: 425 aacggcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacgg 480 ||||| || ||||| ||||||| ||||| || ||| |||||||||||| ||||| Sbjct: 334 aacggaggactagatctggactgggacactgtcttctccaagatcgacactgacgg 389
>dbj|AK243507.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100074P06, full insert sequence Length = 758 Score = 61.9 bits (31), Expect = 3e-06 Identities = 139/175 (79%) Strand = Plus / Plus Query: 305 tggaccgccttctgcgggcccgccgggcccatcggccaggcatcttgcggcaagtgcatc 364 ||||| |||||||| ||||||| ||||||| |||| || || ||||||||||| | Sbjct: 283 tggacggccttctgtgggcccgttgggcccaccggcagggactcctgcggcaagtgtctt 342 Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagc 424 | |||||| || | || |||||| || |||| ||||||||||| || ||||||||| | Sbjct: 343 cgggtgacgaatagggtgacgggagcccagaccacggcgaggattgtggacaagtgcgcc 402 Query: 425 aacggcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacg 479 ||||| || ||||| ||||||| ||||| || ||| |||||||||||| |||| Sbjct: 403 aacggaggactagatctggactgggacactgtcttctccaagatcgacactgacg 457
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 365 caggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgcagc 424 |||||||| || | || |||||| || |||| ||||||||||| || ||||||||| | Sbjct: 169424 caggtgacgaatagggtgacgggagcccagaccacggcgaggattgtggacaagtgcgcc 169483 Query: 425 aacggcggtctagacctggacttagacacggtgttcagcaagatcgacaccgacgg 480 ||||| || ||||| ||||||| ||||| || ||| |||||||||||| ||||| Sbjct: 169484 aacggaggactagatctggactgggacactgtcttctccaagatcgacactgacgg 169539
>emb|CT829865.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN038N15, full insert sequence Length = 726 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 367 ggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgc 421 |||||| ||||||||||| |||| ||||| |||||||||||||| ||| ||||| Sbjct: 339 ggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgc 393
>ref|NM_001074721.1| Oryza sativa (japonica cultivar-group) Os11g0592100 (Os11g0592100) mRNA, complete cds Length = 730 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 367 ggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgc 421 |||||| ||||||||||| |||| ||||| |||||||||||||| ||| ||||| Sbjct: 345 ggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgc 399
>gb|AY435041.1| Oryza sativa (indica cultivar-group) pathogenesis-related protein 4b (PR-4b) mRNA, complete cds Length = 739 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 367 ggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgc 421 |||||| ||||||||||| |||| ||||| |||||||||||||| ||| ||||| Sbjct: 325 ggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgc 379
>dbj|AK063234.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F08, full insert sequence Length = 730 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 367 ggtgacaaacacggcgacgggggcacagattacggcgaggatcgtcgacaagtgc 421 |||||| ||||||||||| |||| ||||| |||||||||||||| ||| ||||| Sbjct: 345 ggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgc 399
>ref|NM_111344.3| Arabidopsis thaliana PR4 (PATHOGENESIS-RELATED 4) (PR4) mRNA, complete cds Length = 794 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgggcc 324 |||||| ||||||||||||||||||||||| Sbjct: 370 caagtatggctggaccgccttctgcgggcc 399
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 295 caagtacggctggaccgccttctgcgggcc 324 |||||| ||||||||||||||||||||||| Sbjct: 64546 caagtatggctggaccgccttctgcgggcc 64517
>gb|AF083695.1| Arabidopsis thaliana clone sps166 unknown mRNA Length = 528 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgggcc 324 |||||| ||||||||||||||||||||||| Sbjct: 354 caagtatggctggaccgccttctgcgggcc 383
>gb|BT000046.1| Arabidopsis thaliana hevein-like protein precursor (At3g04720) mRNA, complete cds Length = 674 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgggcc 324 |||||| ||||||||||||||||||||||| Sbjct: 339 caagtatggctggaccgccttctgcgggcc 368
>gb|AY088644.1| Arabidopsis thaliana clone 8793 mRNA, complete sequence Length = 790 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgggcc 324 |||||| ||||||||||||||||||||||| Sbjct: 370 caagtatggctggaccgccttctgcgggcc 399
>gb|AF370536.1|AF370536 Arabidopsis thaliana hevein-like protein precursor (F7O18.21) mRNA, complete cds Length = 787 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgggcc 324 |||||| ||||||||||||||||||||||| Sbjct: 365 caagtatggctggaccgccttctgcgggcc 394
>emb|BX825093.1|CNS0A6SZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 762 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgggcc 324 |||||| ||||||||||||||||||||||| Sbjct: 344 caagtatggctggaccgccttctgcgggcc 373
>emb|BX825387.1|CNS0A6AL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 779 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgggcc 324 |||||| ||||||||||||||||||||||| Sbjct: 355 caagtatggctggaccgccttctgcgggcc 384
>gb|U01880.1|U01880 Arabidopsis thaliana pre-hevein-like protein mRNA, complete cds Length = 767 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgggcc 324 |||||| ||||||||||||||||||||||| Sbjct: 344 caagtatggctggaccgccttctgcgggcc 373
>gb|DQ226954.1| Boechera divaricarpa isolate AD-A5 mRNA sequence Length = 482 Score = 46.1 bits (23), Expect = 0.17 Identities = 26/27 (96%) Strand = Plus / Plus Query: 295 caagtacggctggaccgccttctgcgg 321 |||||| |||||||||||||||||||| Sbjct: 241 caagtatggctggaccgccttctgcgg 267
>ref|XM_001136569.1| PREDICTED: Pan troglodytes HIV-1 Rev binding protein, transcript variant 1 (HRB), mRNA Length = 2559 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 68 cgcgctggccgccatggccgcggcgc 43
>ref|XM_001136642.1| PREDICTED: Pan troglodytes HIV-1 Rev binding protein, transcript variant 2 (HRB), mRNA Length = 2986 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 68 cgcgctggccgccatggccgcggcgc 43
>ref|XM_001136878.1| PREDICTED: Pan troglodytes HIV-1 Rev binding protein, transcript variant 4 (HRB), mRNA Length = 7756 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 68 cgcgctggccgccatggccgcggcgc 43
>ref|XM_001136721.1| PREDICTED: Pan troglodytes HIV-1 Rev binding protein, transcript variant 3 (HRB), mRNA Length = 7813 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 68 cgcgctggccgccatggccgcggcgc 43
>ref|XM_001137193.1| PREDICTED: Pan troglodytes HIV-1 Rev binding protein, transcript variant 8 (HRB), mRNA Length = 7876 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 68 cgcgctggccgccatggccgcggcgc 43
>ref|XM_001137107.1| PREDICTED: Pan troglodytes HIV-1 Rev binding protein, transcript variant 7 (HRB), mRNA Length = 7920 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 112 cgcgctggccgccatggccgcggcgc 87
>ref|XM_001137024.1| PREDICTED: Pan troglodytes HIV-1 Rev binding protein, transcript variant 6 (HRB), mRNA Length = 7924 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 68 cgcgctggccgccatggccgcggcgc 43
>ref|XM_001136953.1| PREDICTED: Pan troglodytes HIV-1 Rev binding protein, transcript variant 5 (HRB), mRNA Length = 7948 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 68 cgcgctggccgccatggccgcggcgc 43
>gb|BC096275.3| Homo sapiens HIV-1 Rev binding protein, mRNA (cDNA clone MGC:116941 IMAGE:40006449), complete cds Length = 1789 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 65 cgcgctggccgccatggccgcggcgc 40
>gb|BC096273.3| Homo sapiens HIV-1 Rev binding protein, mRNA (cDNA clone MGC:116939 IMAGE:40006446), complete cds Length = 1789 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 65 cgcgctggccgccatggccgcggcgc 40
>gb|BC096272.3| Homo sapiens HIV-1 Rev binding protein, mRNA (cDNA clone MGC:116938 IMAGE:40006445), complete cds Length = 1783 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 65 cgcgctggccgccatggccgcggcgc 40
>ref|NM_004504.3| Homo sapiens HIV-1 Rev binding protein (HRB), mRNA Length = 4878 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 111 cgcgctggccgccatggccgcggcgc 86
>gb|BC030592.2| Homo sapiens HIV-1 Rev binding protein, mRNA (cDNA clone MGC:26523 IMAGE:4836885), complete cds Length = 3912 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 99 cgcgctggccgccatggccgcggcgc 74
>gb|BC096274.1| Homo sapiens HIV-1 Rev binding protein, mRNA (cDNA clone MGC:116940 IMAGE:40006448), complete cds Length = 1669 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 65 cgcgctggccgccatggccgcggcgc 40
>ref|NM_001038171.1| Bos taurus HIV-1 Rev binding protein (HRB), mRNA gb|BC111120.1| Bos taurus HIV-1 Rev binding protein, mRNA (cDNA clone MGC:128795 IMAGE:7989466), complete cds Length = 2667 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 248 cgcgctggccgccatggccgcggcgc 223
>gb|AF362989.1| Prunus persica class 4 pathogenesis-related protein mRNA, partial cds Length = 509 Score = 44.1 bits (22), Expect = 0.68 Identities = 37/42 (88%) Strand = Plus / Plus Query: 497 ggccacctcactgtcaactaccagtttgtcgactgtggcgac 538 |||||||| | |||||||||| | ||||| |||||||||||| Sbjct: 280 ggccaccttattgtcaactacgactttgttgactgtggcgac 321
>gb|AC097662.5| Homo sapiens BAC clone RP11-563C6 from 2, complete sequence Length = 206624 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 201526 cgcgctggccgccatggccgcggcgc 201501
>gb|L42025.1|HUMRABCCF Homo sapiens cellular co-factor (RAB) gene, complete cds Length = 2583 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 258 cgcgctggccgccatggccgcggcgc 233
>emb|X89478.1|HSRNANLP H.sapiens mRNA for nucleoporin-like protein Length = 2414 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 cgcgttggccgccatggccgcggcgc 170 |||| ||||||||||||||||||||| Sbjct: 81 cgcgctggccgccatggccgcggcgc 56
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 ccgccgggcccatcggccagg 344 ||||||||||||||||||||| Sbjct: 934910 ccgccgggcccatcggccagg 934890
>gb|AC133489.32| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence Length = 225524 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 482 gtgggtatgcagcagggccac 502 ||||||||||||||||||||| Sbjct: 115137 gtgggtatgcagcagggccac 115157
>gb|AY573794.1| Triticum aestivum pathogenesis-related protein precursor (PR4f-a) gene, complete cds Length = 631 Score = 42.1 bits (21), Expect = 2.7 Identities = 48/57 (84%) Strand = Plus / Plus Query: 216 agaagaacaactgggacctcaacaccgccggcgtctactgcgccacatgggacgccg 272 |||||| |||||||||||| | |||| ||||||||||||| || |||||||||| Sbjct: 199 agaagatcaactgggacctgcgcgtcgccagcgtctactgcgcgacgtgggacgccg 255
>emb|AM116976.1| Triticum aestivum wPR4f-b gene for wheatwin6-b defense protein, exons 1-2 Length = 2561 Score = 42.1 bits (21), Expect = 2.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 298 gtacggctggaccgccttctgcgggcccgccgg 330 |||||||||||| || |||||||| |||||||| Sbjct: 719 gtacggctggacggcgttctgcggccccgccgg 751
>gb|AC011390.3| Homo sapiens chromosome 5 clone CTB-176I15, complete sequence Length = 56173 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 663 acagaccaatgatatataaag 683 ||||||||||||||||||||| Sbjct: 26052 acagaccaatgatatataaag 26072
>gb|AC156951.7| Mus musculus 6 BAC RP24-339D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 142364 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 gtgggtatgcagcagggccac 502 ||||||||||||||||||||| Sbjct: 86499 gtgggtatgcagcagggccac 86479
>emb|AL672143.12| Mouse DNA sequence from clone RP23-467P3 on chromosome 11 Contains part of a novel gene, complete sequence Length = 170167 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 537 acaactaagaagaaagaattg 557 ||||||||||||||||||||| Sbjct: 55089 acaactaagaagaaagaattg 55109
>emb|AJ243213.1|HSA243213 Homo sapiens partial 5-HT4 receptor gene, exons 2 to 5 Length = 130985 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 663 acagaccaatgatatataaag 683 ||||||||||||||||||||| Sbjct: 23589 acagaccaatgatatataaag 23569
>gb|AF061329.1|AF061329 Vitis vinifera PR-4 type protein (PR-4a) gene, complete cds Length = 1497 Score = 42.1 bits (21), Expect = 2.7 Identities = 57/69 (82%) Strand = Plus / Plus Query: 250 ctactgcgccacatgggacgccggcatgtccttggcctggcgctccaagtacggctggac 309 ||||||| |||| ||||| ||| || | ||||||| |||||| |||||| || ||||| Sbjct: 942 ctactgctccacttgggatgccagccagcccttggcatggcgcagcaagtatggatggac 1001 Query: 310 cgccttctg 318 ||||||||| Sbjct: 1002 cgccttctg 1010 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 105,516,461 Number of extensions: 5390613 Number of successful extensions: 110112 Number of sequences better than 10.0: 63 Number of HSP's gapped: 110105 Number of HSP's successfully gapped: 88 Length of query: 719 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 697 Effective length of database: 18,508,616,841 Effective search space: 12900505938177 Effective search space used: 12900505938177 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)