ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf74k13 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g63800:12001.t05748:unspliced-genomic pleckstrin homology domain-containing protein 1, putative,| expressed Length = 977 Score = 311 bits (673), Expect(3) = 1e-89 Identities = 123/149 (82%), Positives = 133/149 (89%) Frame = +3 / +2 Query: 39 LMASLWRAVMGTGAPSASADATDGIEFWREPERGGWLDKQGEYIKTWRRRWFVLKQGKLF 218 + ASLWRAVMG GA SA D T G+EFWR PER GWL KQGEYIKTWRRRWFVLKQG+LF Sbjct: 89 MAASLWRAVMGAGASSADTDTTGGVEFWRSPERAGWLTKQGEYIKTWRRRWFVLKQGRLF 268 Query: 219 WFKDSTVTRASVPRGVIAVASCLTVKGAEDVLNRKFAFELSTPGETMYFVADSDKEKEDW 398 WFKDS VTRASVPRGVI VA+CLTVKGAED LNR+FAFELSTP ETMYF+ADS+KEKE+W Sbjct: 269 WFKDSGVTRASVPRGVIPVATCLTVKGAEDTLNRQFAFELSTPAETMYFIADSEKEKEEW 448 Query: 399 INSIGRSIVQHSRSMTDDEIVDYDSGHPA 485 INSIGRSIVQHSRS+TD E+VDYDSG PA Sbjct: 449 INSIGRSIVQHSRSVTDAEVVDYDSGRPA 535 Score = 34.5 bits (69), Expect(3) = 1e-89 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = +1 / +3 Query: 7 LPDPIPKSPHISWR 48 LP PIPKSP ISWR Sbjct: 54 LPQPIPKSPRISWR 95 Score = 24.4 bits (47), Expect(3) = 1e-89 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +2 / +2 Query: 509 SIDWRAKGPV 538 SIDW AKGPV Sbjct: 575 SIDW*AKGPV 604 Score = 278 bits (601), Expect(3) = 6e-81 Identities = 121/147 (82%), Positives = 124/147 (84%) Frame = -1 / -3 Query: 484 AGWPLS*STISSSVMDRECWTMERPMELIQSSFSLSESATKYMVSPGVESSKANLRLSTS 305 AG PLS*ST S+SV +RECWTMERPMELI SSFS SESA KYMVS GVESSKAN RLS S Sbjct: 534 AGRPLS*STTSASVTERECWTMERPMELIHSSFSFSESAMKYMVSAGVESSKANCRLSVS 355 Query: 304 SAPLTVRQEATAMTPRGTDARVTVESLNQKSFPCLSTNHRRRHVLMYSPCLSSHPPRSGS 125 SAPLTVRQ AT MTPRGTDARVT ESLNQKS PCLSTNHRRRHVLMYSPCL SHP RSG Sbjct: 354 SAPLTVRQVATGMTPRGTDARVTPESLNQKSLPCLSTNHRRRHVLMYSPCLVSHPARSGE 175 Query: 124 RQNSMPSVASADADGAPVPITARHKLA 44 RQNS P V S AD AP PITARH+LA Sbjct: 174 RQNSTPPVVSVSADEAPAPITARHRLA 94 Score = 31.3 bits (62), Expect(3) = 6e-81 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = -1 / -2 Query: 538 HRSFCSPINRRTYDLRPVAG 479 HRSFCSPINR L V G Sbjct: 604 HRSFCSPINR*NRSLVAVCG 545 Score = 31.3 bits (62), Expect(3) = 6e-81 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -3 / -2 Query: 47 RHEMWGDLGIGSGR 6 RHEM GDLGIG GR Sbjct: 94 RHEMRGDLGIGCGR 53 Score = 56.1 bits (116), Expect(3) = 2e-11 Identities = 24/43 (55%), Positives = 25/43 (58%) Frame = +2 / +1 Query: 311 AQPQVRLRALHPGRDHVXXXXXXXXXXXXXXXHRPLHCPALPI 439 AQP VRLRALHPG DHV HRPLH PALP+ Sbjct: 361 AQPAVRLRALHPGGDHVLHRRLREGEGGVDQLHRPLHRPALPL 489 Score = 30.4 bits (60), Expect(3) = 2e-11 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +3 / +2 Query: 3 SSPRPDPQIPPHLMAS 50 +SP DPQIP HLMA+ Sbjct: 50 NSPAADPQIPTHLMAA 97 Score = 23.5 bits (45), Expect(3) = 2e-11 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = +3 / +3 Query: 480 PATGRKS*VRRLIGEQKD 533 P T RLIGEQKD Sbjct: 546 PQTATSDRFHRLIGEQKD 599 Score = 30.9 bits (61), Expect(2) = 0.65 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -1 / -3 Query: 46 AMRCGGIWGSGRGE 5 AMRC GIWGS GE Sbjct: 93 AMRCVGIWGSAAGE 52 Score = 24.4 bits (47), Expect(2) = 0.65 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = -2 / -3 Query: 537 TGPFARQSID 508 TGPFA QSID Sbjct: 603 TGPFAHQSID 574
>LOC_Os05g37460:12005.t04649:unspliced-genomic expressed protein| Length = 1029 Score = 264 bits (570), Expect = 8e-70 Identities = 103/134 (76%), Positives = 119/134 (88%) Frame = +3 / +3 Query: 72 TGAPSASADATDGIEFWREPERGGWLDKQGEYIKTWRRRWFVLKQGKLFWFKDSTVTRAS 251 + + +A DA G+EFW ER GWL+KQGEYIKTWRRRWFVLKQG+LFWFKD+ VTR S Sbjct: 228 SSSSAAGGDAGGGVEFWHGGERTGWLNKQGEYIKTWRRRWFVLKQGRLFWFKDAAVTRGS 407 Query: 252 VPRGVIAVASCLTVKGAEDVLNRKFAFELSTPGETMYFVADSDKEKEDWINSIGRSIVQH 431 VPRGVI VA+CLTVKGAEDV+NR+FAFELSTP +TMYF+ADS+KEKE+WINSIGRSIVQH Sbjct: 408 VPRGVIPVATCLTVKGAEDVINRQFAFELSTPTDTMYFIADSEKEKEEWINSIGRSIVQH 587 Query: 432 SRSMTDDEIVDYDS 473 SRS+TD E+VDYDS Sbjct: 588 SRSVTDAEVVDYDS 629 Score = 216 bits (466), Expect = 2e-55 Identities = 99/129 (76%), Positives = 103/129 (79%) Frame = -1 / -3 Query: 472 LS*STISSSVMDRECWTMERPMELIQSSFSLSESATKYMVSPGVESSKANLRLSTSSAPL 293 LS*ST S+SV +REC TM+RPMELI SSFS SESA KYMVS GVESSKAN RL TSSAPL Sbjct: 628 LS*STTSASVTEREC*TMDRPMELIHSSFSFSESAMKYMVSVGVESSKANWRLMTSSAPL 449 Query: 292 TVRQEATAMTPRGTDARVTVESLNQKSFPCLSTNHRRRHVLMYSPCLSSHPPRSGSRQNS 113 TVRQ AT MTPRGT+ RVT SLNQ S PCLSTNHRRRHVLMYSPCL SHP RS QNS Sbjct: 448 TVRQVATGMTPRGTEPRVTAASLNQNSRPCLSTNHRRRHVLMYSPCLFSHPVRSPPCQNS 269 Query: 112 MPSVASADA 86 P AS A Sbjct: 268 TPPPASPPA 242 Score = 51.9 bits (107), Expect(2) = 3e-07 Identities = 21/42 (50%), Positives = 23/42 (54%) Frame = +2 / +2 Query: 314 QPQVRLRALHPGRDHVXXXXXXXXXXXXXXXHRPLHCPALPI 439 QP VRLRALHP R HV HRP+HC ALP+ Sbjct: 470 QPPVRLRALHPDRHHVLHRRLREREGRVDQFHRPIHCSALPL 595 Score = 25.4 bits (49), Expect(2) = 3e-07 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 / +3 Query: 39 LMASLWRAVMGTGAPSASADAT 104 + SLWRAVMG S+ ++ Sbjct: 174 MAVSLWRAVMGAAGGGGSSSSS 239
>LOC_Os12g18770:12012.t01725:unspliced-genomic oxysterol binding protein, putative, expressed| Length = 9933 Score = 36.8 bits (74), Expect = 0.20 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +3 / +2 Query: 81 PSASADATDGIEFWREPERGGWLDKQGEYIKTWRRRWFVLKQGKLFWFK 227 P A+A A + + G L K Y K WR RWFVL+ G L ++K Sbjct: 278 PPAAAVAAQVVLDAAQAAVAGVLHKWVNYGKGWRLRWFVLEGGVLSYYK 424
>LOC_Os04g55510:12004.t05023:unspliced-genomic zinc finger, C3HC4 type family protein, expressed| Length = 5672 Score = 35.9 bits (72), Expect = 0.38 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -1 / +1 Query: 214 SFPCLSTNHRRRHVLMYSPCLSSHPPRS 131 S P L+++H H +SPCLS PP S Sbjct: 103 SLPPLTSSHHHHHPTSFSPCLSPSPPPS 186
>LOC_Os06g40360:12006.t03732:unspliced-genomic EIN3-binding F-box protein 1, putative, expressed| Length = 3169 Score = 30.9 bits (61), Expect(2) = 0.43 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -1 / +1 Query: 205 CLSTNHRRRHVLMYSPCLSSHPPRSGSR 122 C ST RRR SP ++ PPR SR Sbjct: 739 CSSTRTRRRRTSSRSPLAAAAPPRGASR 822 Score = 22.1 bits (42), Expect(2) = 0.43 Identities = 10/35 (28%), Positives = 15/35 (42%) Frame = -1 / +1 Query: 142 PPRSGSRQNSMPSVASADADGAPVPITARHKLAMR 38 P RSG + SV + +P P + + A R Sbjct: 865 PTRSGEASRASSSVGATRRAASPTPASRPPRAAAR 969
>LOC_Os12g09210:12012.t00800:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 2794 Score = 27.6 bits (54), Expect(2) = 0.58 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -1 / +1 Query: 229 SLNQKSFPCLSTNHRRRHVLMYSPCLSSHPP 137 SL+ PC +++ RR H Y P PP Sbjct: 1285 SLSSTPAPCTTSSARR*HTCEYHPLAVPRPP 1377 Score = 24.9 bits (48), Expect(2) = 0.58 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = -1 / +1 Query: 373 SATKYMVSPGVESSKANLRLSTSSAPLTVRQEATAMTPRGTDARVTVESLNQKSFP 206 SAT M S ++ N S SSA T R+ T R T + +T+ S + P Sbjct: 1048 SATTVMKSTFPGNTARNPSSSRSSASPTTRRARTTRHRRPTQSWLTLASCSSPYTP 1215
>LOC_Os12g38620:12012.t03542:unspliced-genomic bromodomain associated family protein, expressed| Length = 3818 Score = 35.0 bits (70), Expect = 0.71 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +3 / -1 Query: 117 FWREPERGGWLDKQGEYIKTWRRRWFVLKQGKLFW 221 F E ERGG D+ ++I+ WRR W ++ + W Sbjct: 128 FGGEAERGGGGDRWVDWIRAWRRVWIRIRAREAKW 24
>LOC_Os02g39270:12002.t03565:unspliced-genomic hypothetical protein| Length = 1324 Score = 35.0 bits (70), Expect = 0.71 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +3 / -3 Query: 3 SSPRPDPQIPPHLMASLWRAVMGTGAPSASADATDGIEFWR 125 SSP P P+ PP A LWR V TG+ + T + R Sbjct: 752 SSPPPPPRQPPAAAAQLWRHVAPTGSAHPTPACTTAASWRR 630
>LOC_Os06g12930:12006.t01169:unspliced-genomic expressed protein| Length = 1524 Score = 35.0 bits (70), Expect = 0.72 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = -1 / -3 Query: 208 PCLSTNHRRRHVLMYSPCLSSHPPRSGSRQNSMPSVASADADGAPVPIT 62 PC+ T+H R P + PP + + PS ++ A+ PVP+T Sbjct: 511 PCVPTSHSRSLSKPLRPSYNEPPPFPATPRWRFPSPSATAAESPPVPLT 365
>LOC_Os04g59340:12004.t05392:unspliced-genomic RNA-binding region RNP-1, putative, expressed| Length = 2031 Score = 34.5 bits (69), Expect = 0.99 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 / +2 Query: 232 ESLNQKSFPCLSTNHRRRHVLMYSPCLSSHPPRSGSRQ 119 +S N + FP ++ +HR RH YSP + S P R R+ Sbjct: 35 QSRNLRCFPPIAPSHRHRHRHRYSPSIFSLPWRHKRRK 148
>LOC_Os03g24180:12003.t02113:unspliced-genomic rho GTPase activator, putative, expressed| Length = 11527 Score = 34.1 bits (68), Expect = 1.3 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +3 / +1 Query: 111 IEFWREPERGGWLDKQGEYIKTWRRRWFVLKQGKLFWFKDSTVT 242 I F+ E ++ G K+W++RWF+L + L +FK V+ Sbjct: 2572 IIFFYSKENSFYI*FSGIGWKSWKKRWFILTRTSLVFFKSDPVS 2703
>LOC_Os06g51450:12006.t04828:unspliced-genomic PHD zinc finger protein, putative, expressed| Length = 7815 Score = 28.1 bits (55), Expect(3) = 1.5 Identities = 9/14 (64%), Positives = 13/14 (92%) Frame = +3 / +2 Query: 750 NVLIQVYISSRSKW 791 +V+IQ+Y+SSRS W Sbjct: 2714 HVVIQIYVSSRSTW 2755 Score = 25.4 bits (49), Expect(3) = 1.5 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +3 / +2 Query: 3 SSPRPDPQIPPHLMASLWRAVMGTGAPSASADA 101 SSP P P PP L S RA+ P + A Sbjct: 233 SSPSPSPPRPPSLPPSAARALHPPHLPPPTPSA 331 Score = 23.5 bits (45), Expect(3) = 1.5 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +2 / +3 Query: 503 GPSIDWRAKGPVRRRWH 553 GP+ W A+GP R+ H Sbjct: 639 GPARHWLARGPPRQVHH 689
>LOC_Os07g46450:12007.t04281:unspliced-genomic rho GTPase activator, putative, expressed| Length = 9343 Score = 33.6 bits (67), Expect = 1.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 171 KTWRRRWFVLKQGKLFWFKDSTVT 242 K+W++RWF+L + L +FK V+ Sbjct: 1474 KSWKKRWFILTRTSLVFFKSDPVS 1545
>LOC_Os10g08410:12010.t00662:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1725 Score = 33.6 bits (67), Expect = 1.9 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = -1 / +1 Query: 343 VESSKANLRLSTSSAPLTVRQEATAMTPRGTDARVTVESLNQKSFPCLST 194 + SK+ S S P R AT+ T + DAR V +SFPCLS+ Sbjct: 1201 ISYSKSAALNSRSIYPGRGRVSATSATEKAGDARREVCKRKSRSFPCLSS 1350
>LOC_Os09g34870:12009.t03014:unspliced-genomic conserved hypothetical protein| Length = 3886 Score = 33.6 bits (67), Expect = 1.9 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -1 / +2 Query: 139 PRSGSRQNSMPSVASADADGAPVPITARHKLAMRCGG 29 PRS S S P + SA A P+ + R + AMRC G Sbjct: 470 PRSPSATRSSPCMPSAPAPPTPLAPSGRCRSAMRCPG 580
>LOC_Os06g22390:12006.t02053:unspliced-genomic expressed protein| Length = 766 Score = 33.6 bits (67), Expect = 1.9 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -1 / -2 Query: 208 PCLSTNHRRRHVLMYSPCLSSHPPRSGSRQNSMPSVASADADGAPVPIT 62 P +T+ RR +L+ PPR R+ P+ A+A + P P T Sbjct: 309 PAAATSSRRARLLLLRRTHRHPPPRRRRRRRPAPAAAAAASPSPPAPAT 163
>LOC_Os04g36640:12004.t03285:unspliced-genomic dehydration-responsive element-binding protein 1D, putative| Length = 555 Score = 33.6 bits (67), Expect = 1.9 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = -1 / -3 Query: 142 PPRSGSRQNSMPSVASADADGAPVPITARHKLAMRCGGIWGSGRG 8 PPR+ R+ + A A GAP P + R GG W G G Sbjct: 358 PPRARRRRRRRRAPRPAQARGAPGPQPPPRRRGCRPGGSWPGGAG 224
>LOC_Os10g30180:12010.t02352:unspliced-genomic hsp20/alpha crystallin family protein, expressed| Length = 1078 Score = 28.1 bits (55), Expect(2) = 2.3 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 / -3 Query: 151 SSHPPRSGSRQNSMPSVASA 92 +S PPR G R+ S+P A+A Sbjct: 947 ASPPPRGGGRRRSLPPAAAA 888 Score = 25.4 bits (49), Expect(2) = 2.3 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = -1 / -1 Query: 58 RHKLAMRCGGIWGSGRG 8 RH+ ++RCGG + +G G Sbjct: 91 RHRESIRCGGRFQTGHG 41
>LOC_Os01g37790:12001.t03318:unspliced-genomic expressed protein| Length = 4225 Score = 27.2 bits (53), Expect(2) = 2.5 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 / +3 Query: 9 PRPDPQIPPHLMASLWRAVMGTGAPSASADA 101 P P P +PP L S + +G G +A+A A Sbjct: 9 PLPPPPLPPLLHTSTETSRLGGGGAAAAAGA 101 Score = 23.1 bits (44), Expect(2) = 2.5 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +3 / +1 Query: 111 IEFWREPERGGWLDKQGE 164 I+ WR E GGW ++ E Sbjct: 208 IDQWRRWEEGGWGERGEE 261
>LOC_Os03g11140:12003.t00914:unspliced-genomic rho GTPase activator, putative, expressed| Length = 11233 Score = 33.1 bits (66), Expect = 2.5 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +3 / +2 Query: 174 TWRRRWFVLKQGKLFWFKDSTVTRASVPRGVIAV 275 TW++RWF+L + L +F+ V +V VI + Sbjct: 3425 TWKKRWFILTRASLVFFRSDPVRYITVVFCVICL 3526
>LOC_Os05g23790:12005.t02036:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3596 Score = 28.1 bits (55), Expect(2) = 2.8 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +1 / +3 Query: 667 ILGLDTTMDRFCPYNFL 717 I G D M+ FCPYN++ Sbjct: 3189 ICGDDDHMEHFCPYNYM 3239 Score = 26.7 bits (52), Expect(2) = 2.8 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = +3 / +2 Query: 138 GGWLDKQGEYIKTWRRRW 191 G W+ GE I+ W +W Sbjct: 710 GSWIVNSGEQIRFWEDKW 763
>LOC_Os06g42910:12006.t03981:unspliced-genomic expressed protein| Length = 2110 Score = 32.7 bits (65), Expect = 3.5 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +3 / -2 Query: 9 PRPDPQIPPHLMASLWRAVMGTGAPSASADATDGI 113 PRP P +P + A +GTGA +A+A A GI Sbjct: 1032 PRPGPPLPERVEAVRTFLFLGTGAAAAAAAAGGGI 928
>LOC_Os03g15180:12003.t01304:unspliced-genomic PH domain containing protein, expressed| Length = 11576 Score = 32.7 bits (65), Expect = 3.5 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +3 / +3 Query: 174 TWRRRWFVLKQGKLFWFKDSTVTRASV 254 TW++RWF+L + L +F+ V +V Sbjct: 3423 TWKKRWFILTRASLVFFRSDPVRYITV 3503
>LOC_Os11g32620:12011.t02858:unspliced-genomic chalcone synthase 8, putative| Length = 1589 Score = 25.8 bits (50), Expect(2) = 3.6 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = -1 / -3 Query: 187 RRRHVLMYSPCLSSHPPRSGSR 122 RRR L C SHPP G+R Sbjct: 1056 RRRRSLAG*ACRGSHPPGRGTR 991 Score = 24.0 bits (46), Expect(2) = 3.6 Identities = 7/10 (70%), Positives = 7/10 (70%) Frame = -1 / -3 Query: 37 CGGIWGSGRG 8 CG WG GRG Sbjct: 873 CGARWGGGRG 844
>LOC_Os08g40280:12008.t03759:unspliced-genomic lectin-like protein kinase, putative, expressed| Length = 4298 Score = 32.2 bits (64), Expect = 4.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +3 / +3 Query: 9 PRPDPQIPPHLMASLWRAVMGTGAPSASADATDG 110 P P P+ PPH + WR+ G A + +A A+ G Sbjct: 1371 PWPPPRSPPHWVTCTWRSGGGR*AAATTAAASPG 1472
>LOC_Os08g28190:12008.t02576:unspliced-genomic actin-like protein 2, putative, expressed| Length = 4687 Score = 32.2 bits (64), Expect = 4.8 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +3 / +3 Query: 726 CWIRIWSLNVLIQVYISSRSKW 791 C++ IWSL VL+ +SS S+W Sbjct: 2601 CFVSIWSLFVLLAELLSSASRW 2666
>LOC_Os02g52330:12002.t04814:unspliced-genomic hypothetical protein| Length = 3432 Score = 32.2 bits (64), Expect = 4.8 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +3 / -3 Query: 6 SPRPDPQIPPHLMASLWRAVMGTGAPSASADATDGIEFWREPERGGWL 149 SP P P +PP A+ R + + +PS + + +P R W+ Sbjct: 160 SPPPSPSLPPSAAAARRRTPLPSTSPSPPPSSPPPVAAPPDPARAAWI 17
>LOC_Os02g27220:12002.t02416:unspliced-genomic protein phosphatase 2C containing protein, expressed| Length = 4899 Score = 32.2 bits (64), Expect = 4.8 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +3 / +2 Query: 12 RPDPQIPPHLMASLWRAVMGTGAPSASADATDGIEFWREPERGGWLDKQ 158 R P++PP A R V G G + +A A G + R GGW ++ Sbjct: 563 RGHPRVPPRRAARARRHVGGGGEAAEAAAAPGGADAARARAWGGWAPRR 709
>LOC_Os03g05610:12003.t00433:unspliced-genomic inorganic phosphate transporter 1-2, putative, expressed| Length = 1803 Score = 32.2 bits (64), Expect = 4.8 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -1 / +3 Query: 157 CLSSHPPRSGSRQNSMPSVASADADGAPVPITARHKLAMRC 35 C + PPR + +++ PS AS+ +DG+ AR RC Sbjct: 270 CRPTSPPR*MASRSAAPSPASSSSDGSATSSAARASTG*RC 392
>LOC_Os01g72900:12001.t06575:unspliced-genomic abscisic stress ripening protein 1, putative, expressed| Length = 702 Score = 32.2 bits (64), Expect = 4.8 Identities = 14/49 (28%), Positives = 18/49 (36%) Frame = -1 / -1 Query: 208 PCLSTNHRRRHVLMYSPCLSSHPPRSGSRQNSMPSVASADADGAPVPIT 62 P RRR +PC P G R+ P GAP P++ Sbjct: 252 PWRMLRRRRRRAWQAAPCACGASPPCGGRRRPPPRPCRRSCGGAPFPLS 106
>LOC_Os01g09440:12001.t00822:unspliced-genomic conserved hypothetical protein| Length = 516 Score = 32.2 bits (64), Expect = 4.8 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 / -3 Query: 307 SSAPLTVRQEATAMTPRGTDARVTVESLNQKSFPCLSTNHRRRH 176 S A R+ A A+ R +L+++S+P ST HRRRH Sbjct: 157 SLAATPARRPAHALQLPSLPRRPPPSALSRRSWPTPSTGHRRRH 26
>LOC_Os06g47200:12006.t04406:unspliced-genomic lipid binding protein, putative, expressed| Length = 2875 Score = 27.6 bits (54), Expect(2) = 5.6 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +3 / +1 Query: 108 GIEFWREPERGGWLDKQGEYIKTWRRRW 191 G E R+ R GWL + + + WR RW Sbjct: 100 GRERERDRWRRGWLRRWRPWWRLWRSRW 183 Score = 25.8 bits (50), Expect(2) = 5.6 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +2 / +1 Query: 695 GFVLITFFQVLLDSYLVLKRSYPSVYL 775 G +L+T +Q L SY+ SVYL Sbjct: 2077 GMLLVTVYQTALQSYIYASYCC*SVYL 2157
>LOC_Os03g03720:12003.t00254:unspliced-genomic glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor,| putative, expressed Length = 3403 Score = 24.9 bits (48), Expect(2) = 6.1 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -1 / -1 Query: 208 PCLSTNHRRRHVLMYSPCLSSHPPRSGS 125 PC + RRR S C S PPR+ S Sbjct: 2632 PCGTRRSRRRR*CRSSRC*SPGPPRTRS 2549 Score = 24.0 bits (46), Expect(2) = 6.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -1 / -1 Query: 136 RSGSRQNSMPSVASADADGAPVPITARHK 50 RSGS + + AS A GAP P +R + Sbjct: 2554 RSGSARAARCR*ASPSAAGAPAPRPSRRR 2468
>LOC_Os12g40310:12012.t03710:unspliced-genomic retrotransposon protein, putative, SINE subclass| Length = 2206 Score = 31.8 bits (63), Expect = 6.6 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -1 / -3 Query: 163 SPCLSSHPPRSGSRQNSMPSVASADADGAPVPITARHKLAMRCGGIWGSGRGE 5 +P SS PP S S +S+P+ + P P + LAM + RGE Sbjct: 437 APTTSSPPPPSPSSSSSLPTPPCTPTNWTPSPTWSSRTLAMASATSSAAIRGE 279
>LOC_Os11g03410:12011.t00231:unspliced-genomic secondary cell wall-related glycosyltransferase family 47,| putative, expressed Length = 3629 Score = 31.8 bits (63), Expect = 6.6 Identities = 27/107 (25%), Positives = 40/107 (37%) Frame = -1 / +2 Query: 412 PMELIQSSFSLSESATKYMVSPGVESSKANLRLSTSSAPLTVRQEATAMTPRGTDARVTV 233 P + +++ S T S SS R P R A A PRGT T Sbjct: 344 PRDATRATPPSGSSCTTCRRSSTSASSAGRRRQMEPPTPPCGRMSAAAPPPRGTPVGSTS 523 Query: 232 ESLNQKSFPCLSTNHRRRHVLMYSPCLSSHPPRSGSRQNSMPSVASA 92 + + +S+ RRR + S + P S ++S+PS A Sbjct: 524 STASSTGSRSISSPPRRRRAVPPSGSPTPATPTWCSCRSSLPSATIA 664
>LOC_Os10g35990:12010.t02886:unspliced-genomic ATP-dependent RNA helicase dhh1, putative, expressed| Length = 5568 Score = 31.8 bits (63), Expect = 6.6 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 / +1 Query: 829 FFFF*TPRNIPLCHLLRLEIYTWIRTF 749 FF F P N P CH + L IY+ + F Sbjct: 838 FFSFQNPENTPSCHFIALLIYSGVLYF 918
>LOC_Os07g41850:12007.t03840:unspliced-genomic C1-like domain containing protein, expressed| Length = 1230 Score = 31.8 bits (63), Expect = 6.6 Identities = 25/104 (24%), Positives = 43/104 (41%) Frame = -1 / -2 Query: 403 LIQSSFSLSESATKYMVSPGVESSKANLRLSTSSAPLTVRQEATAMTPRGTDARVTVESL 224 ++ S+ S S S + +S SS ++ S+SS+ +++ + + + S Sbjct: 1163 IVSSTSSSSSSFSSSSISSSSSSSSSSSSSSSSSSSAPSSGSSSSSSSSSSSSSSPPSSG 984 Query: 223 NQKSFPCLSTNHRRRHVLMYSPCLSSHPPRSGSRQNSMPSVASA 92 + S P S + S SS PP SGS S S S+ Sbjct: 983 SSSSSPPSSGSSSSSSSSSSSSSSSSSPPSSGSSSPSSSSTISS 852
>LOC_Os07g02490:12007.t00140:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 6589 Score = 31.8 bits (63), Expect = 6.6 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 / -3 Query: 7 LPDPIPKSPHISWRACGER*W 69 LP P PKS +W+A GE W Sbjct: 1553 LPSPRPKSQRATWKAMGESTW 1491
>LOC_Os06g01260:12006.t00026:unspliced-genomic phytochelatin synthase, putative, expressed| Length = 6968 Score = 31.8 bits (63), Expect = 6.6 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -1 / +2 Query: 163 SPCLSSHPPRSGSRQNSMPSVASADADGAPVPITA 59 SPCL++ P + R+ + PS S + APVP++A Sbjct: 407 SPCLTAASPSTR*RRRASPSPNSPASRTAPVPMSA 511
>LOC_Os05g50020:12005.t04434:unspliced-genomic hypothetical protein| Length = 1206 Score = 31.8 bits (63), Expect = 6.6 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -1 / -3 Query: 160 PCLSSHPPRSGSRQNSMPSVASADADGAPVPITARHKLAMR 38 P SS PP S + S S+ G P+P TA +LA R Sbjct: 946 PAWSSAPPMSNEPGRRVTSP*SSGTPGTPMPATASWELASR 824
>LOC_Os04g47059:12004.t04234:unspliced-genomic TRANSPARENT TESTA 8 protein, putative, expressed| Length = 24227 Score = 31.8 bits (63), Expect = 6.6 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 / -3 Query: 7 LPDPIPKSPHISWRACGER*W 69 LP P PKS +W+A GE W Sbjct: 1383 LPSPRPKSQRATWKAMGESTW 1321
>LOC_Os03g03990:12003.t00280:unspliced-genomic CAO, putative, expressed| Length = 1326 Score = 31.8 bits (63), Expect = 6.6 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -1 / -3 Query: 163 SPCLSSHPPRSGSRQNSMPSVA 98 SPC +HPPR G S P VA Sbjct: 490 SPCAPAHPPRRGHAAASRPRVA 425
>LOC_Os02g52630:12002.t04843:unspliced-genomic fucosyltransferase 7, putative, expressed| Length = 2743 Score = 31.8 bits (63), Expect = 6.6 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -1 / +3 Query: 184 RRHVLMYSPCLSSHPPRSGSRQNSMPSVASADADGAPVPITARH 53 RR ++ + PP G S P A+ADA GAP + +H Sbjct: 1116 RREIMSQQVRVIPVPPEPGPTTISAPRGAAADARGAPETVRPQH 1247
>LOC_Os01g54890:12001.t04903:unspliced-genomic ethylene-responsive transcription factor 2, putative, expressed| Length = 943 Score = 27.2 bits (53), Expect(2) = 6.7 Identities = 7/16 (43%), Positives = 11/16 (68%) Frame = +3 / -3 Query: 132 ERGGWLDKQGEYIKTW 179 ERGGW+++ E+ W Sbjct: 50 ERGGWMERPREWFAVW 3 Score = 24.4 bits (47), Expect(2) = 6.7 Identities = 11/35 (31%), Positives = 16/35 (45%) Frame = +3 / -1 Query: 3 SSPRPDPQIPPHLMASLWRAVMGTGAPSASADATD 107 ++P P P PP L + W A G + S+ D Sbjct: 439 AAPLPPPPPPPPLRPAGWPATTGAVVRAPSSGDDD 335
>LOC_Os08g39550:12008.t03687:unspliced-genomic polygalacturonase inhibitor 2 precursor, putative, expressed| Length = 1673 Score = 31.3 bits (62), Expect = 9.1 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 / +1 Query: 3 SSPRPDPQIPPHLMASLWRAVMGTGAPSASADATD 107 SSP P P PP L+A+L + A +A+ A D Sbjct: 52 SSPAPSPAAPPLLLAALAALAVVASASAAACSAGD 156
>LOC_Os06g45560:12006.t04244:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 6384 Score = 31.3 bits (62), Expect = 9.1 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = +3 / +1 Query: 723 YCWIRIWSLNVLIQVYISSRSKWHKGMFLG 812 YCWI W L ++Q+ S ++ W+ + G Sbjct: 2890 YCWISRWELPTVLQL*ASYKAFWNTWRYTG 2979
>LOC_Os03g49770:12003.t04324:unspliced-genomic oxysterol-binding protein 1, putative, expressed| Length = 9227 Score = 31.3 bits (62), Expect = 9.1 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 / +1 Query: 141 GWLDKQGEYIKTWRRRWFVLKQGKLFWFK 227 G L K Y + WR RWF L G L ++K Sbjct: 400 GILYKWVNYGRGWRPRWFALHDGVLSYYK 486
>LOC_Os03g20530:12003.t01809:unspliced-genomic expressed protein| Length = 6186 Score = 31.3 bits (62), Expect = 9.1 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 / +2 Query: 177 WRRRWFVLKQGKLFWFKDSTVTRASVPRGVIAVASCLT 290 WR +W ++ + F + TV +PRGV V C T Sbjct: 5585 WRVKW*NVRDPQKFPYYGFTVKFGDIPRGVCRVFRCFT 5698
>LOC_Os12g42840:12012.t03957:unspliced-genomic expressed protein| Length = 2966 Score = 31.3 bits (62), Expect = 9.1 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = -1 / -3 Query: 463 STISSSVMDRECWTMERPMELIQSSFSLSESATKYMVSPGVESSKANLRLSTSS 302 STIS + E + P SFS S+S++ ++ S ANL+ ST S Sbjct: 720 STISLLDLSTELVPPKHPFPATPGSFSTSQSSSTSSLASSSTRSTANLQFSTKS 559
>LOC_Os07g49440:12007.t04571:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3606 Score = 31.3 bits (62), Expect = 9.1 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 / +3 Query: 133 SGSRQNSMPSVASADADGAPVPITARHKLAMRCGG 29 +G + SM V AD A VP+ R A RCGG Sbjct: 267 AGHLRASMRDVHRGAADDAAVPVFLRPATAARCGG 371
>LOC_Os07g42740:12007.t03923:unspliced-genomic calmodulin binding protein, putative, expressed| Length = 1583 Score = 31.3 bits (62), Expect = 9.1 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -1 / +3 Query: 157 CLSSHPPRSGSRQNSMPSVASADADGAPVPITARHKL 47 C S+ S + + PS ASA + AP PI AR L Sbjct: 1203 CRSTGTASSATSAPTRPSTASAASSAAPAPIAARPPL 1313
>LOC_Os03g25530:12003.t02250:unspliced-genomic expressed protein| Length = 381 Score = 31.3 bits (62), Expect = 9.1 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = -1 / -3 Query: 205 CLSTNHRRRHVLMYSPCLSSHPPRSGSRQNSMPSVASADADGAPVP 68 C RRR SPC P S +R + PS +SA P P Sbjct: 373 CGRRRRRRRRGRSRSPCAGGAAPASATRAPAPPSSSSAPRGTLPPP 236
>LOC_Os11g29500:12011.t04325:unspliced-genomic expressed protein| Length = 742 Score = 24.4 bits (47), Expect(2) = 9.1 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +3 / +1 Query: 6 SPRPDPQIPPHLMASLWRAVMGTGAPS 86 S P +PPH A RA G+G+ S Sbjct: 205 SSHQHPLLPPHTQAMAARAGGGSGSGS 285 Score = 24.0 bits (46), Expect(2) = 9.1 Identities = 9/27 (33%), Positives = 12/27 (44%) Frame = +3 / +3 Query: 63 VMGTGAPSASADATDGIEFWREPERGG 143 VMG G + + G+ WR E G Sbjct: 315 VMGGGRATTTGGGRRGVRRWRRDESSG 395 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 249,097,922 Number of extensions: 3900161 Number of successful extensions: 23087 Number of sequences better than 10.0: 53 Length of query: 278 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 229 Effective length of database: 52,856,264 Effective search space: 12104084456 Effective search space used: 12104084456 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
