ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf74k13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832148.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA050J24, full insert sequence Length = 1008 Score = 537 bits (271), Expect = e-149 Identities = 417/465 (89%), Gaps = 3/465 (0%) Strand = Plus / Plus Query: 16 ccgatccccaaatccccccacatctcatggcg---agcttgtggcgagcggtgatgggca 72 ||||||||||||||||| | |||||||||||| ||| ||||||| |||||||||||| Sbjct: 107 ccgatccccaaatccccacgcatctcatggcggcgagcctgtggcgggcggtgatgggcg 166 Query: 73 ccggcgccccgtccgcgtccgcggacgccacggacggcatcgagttctggcgcgagcccg 132 |||||||| |||| ||| | | ||| |||||| ||| | ||||||||||| ||| | Sbjct: 167 ccggcgcctcgtcggcggacaccgacaccacgggcggggtggagttctggcgttcgccgg 226 Query: 133 agcgcggggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggt 192 |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 227 agcgcgcggggtggctgaccaagcagggggagtacatcaagacgtggcggcggcggtggt 286 Query: 193 tcgtgctcaagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccg 252 ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| | Sbjct: 287 tcgtgctcaagcaagggaggctcttctggttcaaggactcgggcgtcacgcgcgcgtcgg 346 Query: 253 tgccccgcggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgc 312 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 347 tgccccgcggcgtcatccccgtcgccacctgcctcaccgtcaagggcgccgaggacacgc 406 Query: 313 tcaaccgcaagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccg 372 ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 407 tcaaccggcagttcgccttcgagctctccaccccggcggagaccatgtacttcatcgccg 466 Query: 373 actccgacaaggagaaggaggactggatcaactccatcggccgctccattgtccagcact 432 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 467 actccgagaaggagaaggaggagtggatcaactccatcggccgctccatcgtccagcact 526 Query: 433 cccgatccatgaccgacgacgagatcgtcgactacgacagcggcc 477 |||| ||| | ||||||| |||||||||||||||||||||||||| Sbjct: 527 cccgctccgtcaccgacgccgagatcgtcgactacgacagcggcc 571 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 tcgattgattggcgagcaaaaggacc 534 |||||||||||| ||||||||||||| Sbjct: 619 tcgattgattggtgagcaaaaggacc 644
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 529 bits (267), Expect = e-147 Identities = 416/465 (89%), Gaps = 3/465 (0%) Strand = Plus / Plus Query: 16 ccgatccccaaatccccccacatctcatggcg---agcttgtggcgagcggtgatgggca 72 ||||||||||||||||| | |||||||||||| ||| ||||||| |||||||||||| Sbjct: 37010393 ccgatccccaaatccccacgcatctcatggcggcgagcctgtggcgggcggtgatgggcg 37010452 Query: 73 ccggcgccccgtccgcgtccgcggacgccacggacggcatcgagttctggcgcgagcccg 132 |||||||| |||| ||| | | ||| |||||| ||| | ||||||||||| ||| | Sbjct: 37010453 ccggcgcctcgtcggcggacaccgacaccacgggcggggtggagttctggcgttcgccgg 37010512 Query: 133 agcgcggggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggt 192 |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 37010513 agcgcgcggggtggctgaccaagcagggggagtacatcaagacgtggcggcggcggtggt 37010572 Query: 193 tcgtgctcaagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccg 252 ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| | Sbjct: 37010573 tcgtgctcaagcaagggaggctcttctggttcaaggactcgggcgtcacgcgcgcgtcgg 37010632 Query: 253 tgccccgcggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgc 312 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 37010633 tgccccgcggcgtcatccccgtcgccacctgcctcaccgtcaagggcgccgaggacacgc 37010692 Query: 313 tcaaccgcaagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccg 372 ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 37010693 tcaaccggcagttcgccttcgagctctccaccccggcggagaccatgtacttcatcgccg 37010752 Query: 373 actccgacaaggagaaggaggactggatcaactccatcggccgctccattgtccagcact 432 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 37010753 actccgagaaggagaaggaggagtggatcaactccatcggccgctccatcgtccagcact 37010812 Query: 433 cccgatccatgaccgacgacgagatcgtcgactacgacagcggcc 477 |||| ||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 37010813 cccgctccgtcaccgacgccgaggtcgtcgactacgacagcggcc 37010857 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 tcgattgattggcgagcaaaaggacc 534 |||||||||||| ||||||||||||| Sbjct: 37010905 tcgattgattggtgagcaaaaggacc 37010930 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 515 gattggcgagcaaaaggaccggtga 539 |||||||||||||| |||||||||| Sbjct: 16502454 gattggcgagcaaacggaccggtga 16502478
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 529 bits (267), Expect = e-147 Identities = 416/465 (89%), Gaps = 3/465 (0%) Strand = Plus / Plus Query: 16 ccgatccccaaatccccccacatctcatggcg---agcttgtggcgagcggtgatgggca 72 ||||||||||||||||| | |||||||||||| ||| ||||||| |||||||||||| Sbjct: 100697 ccgatccccaaatccccacgcatctcatggcggcgagcctgtggcgggcggtgatgggcg 100756 Query: 73 ccggcgccccgtccgcgtccgcggacgccacggacggcatcgagttctggcgcgagcccg 132 |||||||| |||| ||| | | ||| |||||| ||| | ||||||||||| ||| | Sbjct: 100757 ccggcgcctcgtcggcggacaccgacaccacgggcggggtggagttctggcgttcgccgg 100816 Query: 133 agcgcggggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggt 192 |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 100817 agcgcgcggggtggctgaccaagcagggggagtacatcaagacgtggcggcggcggtggt 100876 Query: 193 tcgtgctcaagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccg 252 ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| | Sbjct: 100877 tcgtgctcaagcaagggaggctcttctggttcaaggactcgggcgtcacgcgcgcgtcgg 100936 Query: 253 tgccccgcggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgc 312 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 100937 tgccccgcggcgtcatccccgtcgccacctgcctcaccgtcaagggcgccgaggacacgc 100996 Query: 313 tcaaccgcaagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccg 372 ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 100997 tcaaccggcagttcgccttcgagctctccaccccggcggagaccatgtacttcatcgccg 101056 Query: 373 actccgacaaggagaaggaggactggatcaactccatcggccgctccattgtccagcact 432 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 101057 actccgagaaggagaaggaggagtggatcaactccatcggccgctccatcgtccagcact 101116 Query: 433 cccgatccatgaccgacgacgagatcgtcgactacgacagcggcc 477 |||| ||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 101117 cccgctccgtcaccgacgccgaggtcgtcgactacgacagcggcc 101161 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 tcgattgattggcgagcaaaaggacc 534 |||||||||||| ||||||||||||| Sbjct: 101209 tcgattgattggtgagcaaaaggacc 101234
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683F02 Length = 153388 Score = 529 bits (267), Expect = e-147 Identities = 416/465 (89%), Gaps = 3/465 (0%) Strand = Plus / Plus Query: 16 ccgatccccaaatccccccacatctcatggcg---agcttgtggcgagcggtgatgggca 72 ||||||||||||||||| | |||||||||||| ||| ||||||| |||||||||||| Sbjct: 11534 ccgatccccaaatccccacgcatctcatggcggcgagcctgtggcgggcggtgatgggcg 11593 Query: 73 ccggcgccccgtccgcgtccgcggacgccacggacggcatcgagttctggcgcgagcccg 132 |||||||| |||| ||| | | ||| |||||| ||| | ||||||||||| ||| | Sbjct: 11594 ccggcgcctcgtcggcggacaccgacaccacgggcggggtggagttctggcgttcgccgg 11653 Query: 133 agcgcggggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggt 192 |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 11654 agcgcgcggggtggctgaccaagcagggggagtacatcaagacgtggcggcggcggtggt 11713 Query: 193 tcgtgctcaagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccg 252 ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| | Sbjct: 11714 tcgtgctcaagcaagggaggctcttctggttcaaggactcgggcgtcacgcgcgcgtcgg 11773 Query: 253 tgccccgcggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgc 312 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 11774 tgccccgcggcgtcatccccgtcgccacctgcctcaccgtcaagggcgccgaggacacgc 11833 Query: 313 tcaaccgcaagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccg 372 ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 11834 tcaaccggcagttcgccttcgagctctccaccccggcggagaccatgtacttcatcgccg 11893 Query: 373 actccgacaaggagaaggaggactggatcaactccatcggccgctccattgtccagcact 432 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 11894 actccgagaaggagaaggaggagtggatcaactccatcggccgctccatcgtccagcact 11953 Query: 433 cccgatccatgaccgacgacgagatcgtcgactacgacagcggcc 477 |||| ||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 11954 cccgctccgtcaccgacgccgaggtcgtcgactacgacagcggcc 11998 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 tcgattgattggcgagcaaaaggacc 534 |||||||||||| ||||||||||||| Sbjct: 12046 tcgattgattggtgagcaaaaggacc 12071
>dbj|AK072489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130C15, full insert sequence Length = 967 Score = 529 bits (267), Expect = e-147 Identities = 416/465 (89%), Gaps = 3/465 (0%) Strand = Plus / Plus Query: 16 ccgatccccaaatccccccacatctcatggcg---agcttgtggcgagcggtgatgggca 72 ||||||||||||||||| | |||||||||||| ||| ||||||| |||||||||||| Sbjct: 66 ccgatccccaaatccccacgcatctcatggcggcgagcctgtggcgggcggtgatgggcg 125 Query: 73 ccggcgccccgtccgcgtccgcggacgccacggacggcatcgagttctggcgcgagcccg 132 |||||||| |||| ||| | | ||| |||||| ||| | ||||||||||| ||| | Sbjct: 126 ccggcgcctcgtcggcggacaccgacaccacgggcggggtggagttctggcgttcgccgg 185 Query: 133 agcgcggggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggt 192 |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 186 agcgcgcggggtggctgaccaagcagggggagtacatcaagacgtggcggcggcggtggt 245 Query: 193 tcgtgctcaagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccg 252 ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| | Sbjct: 246 tcgtgctcaagcaagggaggctcttctggttcaaggactcgggcgtcacgcgcgcgtcgg 305 Query: 253 tgccccgcggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgc 312 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 306 tgccccgcggcgtcatccccgtcgccacctgcctcaccgtcaagggcgccgaggacacgc 365 Query: 313 tcaaccgcaagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccg 372 ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 366 tcaaccggcagttcgccttcgagctctccaccccggcggagaccatgtacttcatcgccg 425 Query: 373 actccgacaaggagaaggaggactggatcaactccatcggccgctccattgtccagcact 432 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 426 actccgagaaggagaaggaggagtggatcaactccatcggccgctccatcgtccagcact 485 Query: 433 cccgatccatgaccgacgacgagatcgtcgactacgacagcggcc 477 |||| ||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 486 cccgctccgtcaccgacgccgaggtcgtcgactacgacagcggcc 530 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 tcgattgattggcgagcaaaaggacc 534 |||||||||||| ||||||||||||| Sbjct: 578 tcgattgattggtgagcaaaaggacc 603
>emb|CT831388.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA014B09, full insert sequence Length = 893 Score = 400 bits (202), Expect = e-108 Identities = 301/334 (90%) Strand = Plus / Plus Query: 140 ggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggttcgtgct 199 |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 297 ggggtggctgaacaagcagggggagtacatcaagacgtggcggcggcggtggttcgtgct 356 Query: 200 caagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccgtgccccg 259 |||||||||| ||| ||||||||||||||| | |||| ||||||| || |||||||| Sbjct: 357 caagcaggggcggctgttctggttcaaggacgccgccgtgacgcgcggctcggtgccccg 416 Query: 260 cggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgctcaaccg 319 |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 417 cggcgtcatccccgtcgccacctgcctcaccgtcaagggcgccgaggacgtcatcaaccg 476 Query: 320 caagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccgactccga 379 | |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct: 477 ccagttcgccttcgagctctccaccccgaccgacaccatgtacttcatcgccgactccga 536 Query: 380 caaggagaaggaggactggatcaactccatcggccgctccattgtccagcactcccgatc 439 || |||||||| || |||||||| ||||||||||| |||||||| ||||||||||| || Sbjct: 537 gaaagagaaggaagagtggatcaattccatcggccgatccattgttcagcactcccgctc 596 Query: 440 catgaccgacgacgagatcgtcgactacgacagc 473 | | ||||||| |||| ||||||||||||||||| Sbjct: 597 cgtcaccgacgccgaggtcgtcgactacgacagc 630
>ref|NM_001062227.1| Oryza sativa (japonica cultivar-group) Os05g0447000 (Os05g0447000) mRNA, complete cds Length = 803 Score = 400 bits (202), Expect = e-108 Identities = 301/334 (90%) Strand = Plus / Plus Query: 140 ggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggttcgtgct 199 |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 233 ggggtggctgaacaagcagggggagtacatcaagacgtggcggcggcggtggttcgtgct 292 Query: 200 caagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccgtgccccg 259 |||||||||| ||| ||||||||||||||| | |||| ||||||| || |||||||| Sbjct: 293 caagcaggggcggctgttctggttcaaggacgccgccgtgacgcgcggctcggtgccccg 352 Query: 260 cggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgctcaaccg 319 |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 353 cggcgtcatccccgtcgccacctgcctcaccgtcaagggcgccgaggacgtcatcaaccg 412 Query: 320 caagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccgactccga 379 | |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct: 413 ccagttcgccttcgagctctccaccccgaccgacaccatgtacttcatcgccgactccga 472 Query: 380 caaggagaaggaggactggatcaactccatcggccgctccattgtccagcactcccgatc 439 || |||||||| || |||||||| ||||||||||| |||||||| ||||||||||| || Sbjct: 473 gaaagagaaggaagagtggatcaattccatcggccgatccattgttcagcactcccgctc 532 Query: 440 catgaccgacgacgagatcgtcgactacgacagc 473 | | ||||||| |||| ||||||||||||||||| Sbjct: 533 cgtcaccgacgccgaggtcgtcgactacgacagc 566
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 400 bits (202), Expect = e-108 Identities = 301/334 (90%) Strand = Plus / Minus Query: 140 ggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggttcgtgct 199 |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27886 ggggtggctgaacaagcagggggagtacatcaagacgtggcggcggcggtggttcgtgct 27827 Query: 200 caagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccgtgccccg 259 |||||||||| ||| ||||||||||||||| | |||| ||||||| || |||||||| Sbjct: 27826 caagcaggggcggctgttctggttcaaggacgccgccgtgacgcgcggctcggtgccccg 27767 Query: 260 cggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgctcaaccg 319 |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 27766 cggcgtcatccccgtcgccacctgcctcaccgtcaagggcgccgaggacgtcatcaaccg 27707 Query: 320 caagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccgactccga 379 | |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct: 27706 ccagttcgccttcgagctctccaccccgaccgacaccatgtacttcatcgccgactccga 27647 Query: 380 caaggagaaggaggactggatcaactccatcggccgctccattgtccagcactcccgatc 439 || |||||||| || |||||||| ||||||||||| |||||||| ||||||||||| || Sbjct: 27646 gaaagagaaggaagagtggatcaattccatcggccgatccattgttcagcactcccgctc 27587 Query: 440 catgaccgacgacgagatcgtcgactacgacagc 473 | | ||||||| |||| ||||||||||||||||| Sbjct: 27586 cgtcaccgacgccgaggtcgtcgactacgacagc 27553
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 400 bits (202), Expect = e-108 Identities = 301/334 (90%) Strand = Plus / Minus Query: 140 ggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggttcgtgct 199 |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 21775477 ggggtggctgaacaagcagggggagtacatcaagacgtggcggcggcggtggttcgtgct 21775418 Query: 200 caagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccgtgccccg 259 |||||||||| ||| ||||||||||||||| | |||| ||||||| || |||||||| Sbjct: 21775417 caagcaggggcggctgttctggttcaaggacgccgccgtgacgcgcggctcggtgccccg 21775358 Query: 260 cggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgctcaaccg 319 |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 21775357 cggcgtcatccccgtcgccacctgcctcaccgtcaagggcgccgaggacgtcatcaaccg 21775298 Query: 320 caagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccgactccga 379 | |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct: 21775297 ccagttcgccttcgagctctccaccccgaccgacaccatgtacttcatcgccgactccga 21775238 Query: 380 caaggagaaggaggactggatcaactccatcggccgctccattgtccagcactcccgatc 439 || |||||||| || |||||||| ||||||||||| |||||||| ||||||||||| || Sbjct: 21775237 gaaagagaaggaagagtggatcaattccatcggccgatccattgttcagcactcccgctc 21775178 Query: 440 catgaccgacgacgagatcgtcgactacgacagc 473 | | ||||||| |||| ||||||||||||||||| Sbjct: 21775177 cgtcaccgacgccgaggtcgtcgactacgacagc 21775144
>dbj|AK108280.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-C12, full insert sequence Length = 803 Score = 392 bits (198), Expect = e-106 Identities = 300/334 (89%) Strand = Plus / Plus Query: 140 ggggtggctggacaagcagggcgagtacatcaagacgtggcggcggcggtggttcgtgct 199 |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 233 ggggtggctgaacaagcagggggagtacatcaagacgtggcggcggcggtggttcgtgct 292 Query: 200 caagcaggggaagctcttctggttcaaggactcgaccgtcacgcgcgcgtccgtgccccg 259 |||||||||| ||| ||||||||||||||| | |||| ||||||| || |||||||| Sbjct: 293 caagcaggggcggctgttctggttcaaggacgccgccgtgacgcgcggctcggtgccccg 352 Query: 260 cggcgtcatcgccgtcgcctcctgcctcaccgtcaagggcgccgaggacgtgctcaaccg 319 |||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||| Sbjct: 353 cggcgtcatccccgtcgccacctgcctcgccgtcaagggcgccgaggacgtcatcaaccg 412 Query: 320 caagttcgccttcgagctctccaccccgggcgagaccatgtacttcgtcgccgactccga 379 | |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct: 413 ccagttcgccttcgagctctccaccccgaccgacaccatgtacttcatcgccgactccga 472 Query: 380 caaggagaaggaggactggatcaactccatcggccgctccattgtccagcactcccgatc 439 || |||||||| || |||||||| ||||||||||| |||||||| ||||||||||| || Sbjct: 473 gaaagagaaggaagagtggatcaattccatcggccgatccattgttcagcactcccgctc 532 Query: 440 catgaccgacgacgagatcgtcgactacgacagc 473 | | ||||||| |||| ||||||||||||||||| Sbjct: 533 cgtcaccgacgccgaggtcgtcgactacgacagc 566
>gb|DQ244425.1| Zea mays clone 7446 mRNA sequence Length = 784 Score = 347 bits (175), Expect = 4e-92 Identities = 319/367 (86%) Strand = Plus / Plus Query: 107 cggcatcgagttctggcgcgagcccgagcgcggggggtggctggacaagcagggcgagta 166 |||| |||||||||||| || | ||||||| |||||||| | |||||||||||||| Sbjct: 160 cggcgtcgagttctggcacggcgcagagcgcgctgggtggctaaataagcagggcgagta 219 Query: 167 catcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctggttcaa 226 ||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 220 catcaagacgtggaggcggcggtggttcgtgctgaagcaggggaggcttttctggttcaa 279 Query: 227 ggactcgaccgtcacgcgcgcgtccgtgccccgcggcgtcatcgccgtcgcctcctgcct 286 |||| | | || || || || || |||||||||||||||||| |||||||| ||||||| Sbjct: 280 ggaccctgcggtgacacgggcctcggtgccccgcggcgtcatccccgtcgccacctgcct 339 Query: 287 caccgtcaagggcgccgaggacgtgctcaaccgcaagttcgccttcgagctctccacccc 346 ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 340 cacagtcaagggcgccgaggacgtgctcaaccgccagttcgccttcgagctctccacgcc 399 Query: 347 gggcgagaccatgtacttcgtcgccgactccgacaaggagaaggaggactggatcaactc 406 | |||||||||||| ||| | || |||||||| ||||| |||||||| ||||| ||||| Sbjct: 400 tgccgagaccatgtatttcattgcggactccgagaaggacaaggaggagtggattaactc 459 Query: 407 catcggccgctccattgtccagcactcccgatccatgaccgacgacgagatcgtcgacta 466 |||||| |||||||| |||||||||||||| ||| | ||||||| ||| |||| ||||| Sbjct: 460 catcggtcgctccatcgtccagcactcccgctccgtcaccgacgcagaggtcgttgacta 519 Query: 467 cgacagc 473 ||||||| Sbjct: 520 cgacagc 526
>ref|NM_001051383.1| Oryza sativa (japonica cultivar-group) Os01g0856800 (Os01g0856800) mRNA, complete cds Length = 712 Score = 262 bits (132), Expect = 2e-66 Identities = 177/192 (92%) Strand = Plus / Plus Query: 286 tcaccgtcaagggcgccgaggacgtgctcaaccgcaagttcgccttcgagctctccaccc 345 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 209 tcaccgtcaagggcgccgaggacacgctcaaccggcagttcgccttcgagctctccaccc 268 Query: 346 cgggcgagaccatgtacttcgtcgccgactccgacaaggagaaggaggactggatcaact 405 ||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| Sbjct: 269 cggcggagaccatgtacttcatcgccgactccgagaaggagaaggaggagtggatcaact 328 Query: 406 ccatcggccgctccattgtccagcactcccgatccatgaccgacgacgagatcgtcgact 465 |||||||||||||||| |||||||||||||| ||| | ||||||| |||| ||||||||| Sbjct: 329 ccatcggccgctccatcgtccagcactcccgctccgtcaccgacgccgaggtcgtcgact 388 Query: 466 acgacagcggcc 477 |||||||||||| Sbjct: 389 acgacagcggcc 400 Score = 186 bits (94), Expect = 9e-44 Identities = 166/190 (87%) Strand = Plus / Plus Query: 44 ggcgagcttgtggcgagcggtgatgggcaccggcgccccgtccgcgtccgcggacgccac 103 ||||||| ||||||| |||||||||||| |||||||| |||| ||| | | ||| |||| Sbjct: 15 ggcgagcctgtggcgggcggtgatgggcgccggcgcctcgtcggcggacaccgacaccac 74 Query: 104 ggacggcatcgagttctggcgcgagcccgagcgcggggggtggctggacaagcagggcga 163 || ||| | ||||||||||| ||| ||||||| |||||||||| ||||||||| || Sbjct: 75 gggcggggtggagttctggcgttcgccggagcgcgcggggtggctgaccaagcaggggga 134 Query: 164 gtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctggtt 223 |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 135 gtacatcaagacgtggcggcggcggtggttcgtgctcaagcaagggaggctcttctggtt 194 Query: 224 caaggactcg 233 |||||||||| Sbjct: 195 caaggactcg 204 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 tcgattgattggcgagcaaaaggacc 534 |||||||||||| ||||||||||||| Sbjct: 448 tcgattgattggtgagcaaaaggacc 473
>dbj|AK063895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-G10, full insert sequence Length = 712 Score = 262 bits (132), Expect = 2e-66 Identities = 177/192 (92%) Strand = Plus / Plus Query: 286 tcaccgtcaagggcgccgaggacgtgctcaaccgcaagttcgccttcgagctctccaccc 345 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 209 tcaccgtcaagggcgccgaggacacgctcaaccggcagttcgccttcgagctctccaccc 268 Query: 346 cgggcgagaccatgtacttcgtcgccgactccgacaaggagaaggaggactggatcaact 405 ||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| Sbjct: 269 cggcggagaccatgtacttcatcgccgactccgagaaggagaaggaggagtggatcaact 328 Query: 406 ccatcggccgctccattgtccagcactcccgatccatgaccgacgacgagatcgtcgact 465 |||||||||||||||| |||||||||||||| ||| | ||||||| |||| ||||||||| Sbjct: 329 ccatcggccgctccatcgtccagcactcccgctccgtcaccgacgccgaggtcgtcgact 388 Query: 466 acgacagcggcc 477 |||||||||||| Sbjct: 389 acgacagcggcc 400 Score = 186 bits (94), Expect = 9e-44 Identities = 166/190 (87%) Strand = Plus / Plus Query: 44 ggcgagcttgtggcgagcggtgatgggcaccggcgccccgtccgcgtccgcggacgccac 103 ||||||| ||||||| |||||||||||| |||||||| |||| ||| | | ||| |||| Sbjct: 15 ggcgagcctgtggcgggcggtgatgggcgccggcgcctcgtcggcggacaccgacaccac 74 Query: 104 ggacggcatcgagttctggcgcgagcccgagcgcggggggtggctggacaagcagggcga 163 || ||| | ||||||||||| ||| ||||||| |||||||||| ||||||||| || Sbjct: 75 gggcggggtggagttctggcgttcgccggagcgcgcggggtggctgaccaagcaggggga 134 Query: 164 gtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctggtt 223 |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 135 gtacatcaagacgtggcggcggcggtggttcgtgctcaagcaagggaggctcttctggtt 194 Query: 224 caaggactcg 233 |||||||||| Sbjct: 195 caaggactcg 204 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 tcgattgattggcgagcaaaaggacc 534 |||||||||||| ||||||||||||| Sbjct: 448 tcgattgattggtgagcaaaaggacc 473
>gb|EF051322.1| Gymnadenia conopsea AtPH1-like protein-like mRNA, complete sequence Length = 678 Score = 163 bits (82), Expect = 1e-36 Identities = 262/322 (81%) Strand = Plus / Plus Query: 153 aagcagggcgagtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaag 212 ||||||||||| ||||| ||||| ||||| |||||||||| || |||||||| ||| Sbjct: 113 aagcagggcgaatacattaagacttggcgcaaaaggtggttcgtcctgaagcagggaaag 172 Query: 213 ctcttctggttcaaggactcgaccgtcacgcgcgcgtccgtgccccgcggcgtcatcgcc 272 ||||||||||||||||| || |||||| ||| | ||||| ||||| ||| ||||| || Sbjct: 173 ctcttctggttcaaggattcctgcgtcacccgcacctccgttccccgtggcatcatcccc 232 Query: 273 gtcgcctcctgcctcaccgtcaagggcgccgaggacgtgctcaaccgcaagttcgccttc 332 || |||| ||||||||||| ||||||||||| || || ||||| || | || ||||| Sbjct: 233 gtatcctcatgcctcaccgtgaagggcgccgatgatgtcctcaatcgacaatttgccttt 292 Query: 333 gagctctccaccccgggcgagaccatgtacttcgtcgccgactccgacaaggagaaggag 392 |||||||| || || ||||||| ||||||||| ||||||| || || || ||||||||| Sbjct: 293 gagctctcgactcctcgcgagacgatgtacttcatcgccgattctgagaaagagaaggag 352 Query: 393 gactggatcaactccatcggccgctccattgtccagcactcccgatccatgaccgacgac 452 || |||||||| ||||| || | ||||| || ||||||||| | ||||| |||||| | Sbjct: 353 gagtggatcaattccataggaagatccatcgttcagcactccagctccatcaccgaccaa 412 Query: 453 gagatcgtcgactacgacagcg 474 || ||||||||||| ||||||| Sbjct: 413 gaaatcgtcgactatgacagcg 434
>gb|DQ455771.1| Oenocarpus bataua clone Ob20 microsatellite B11-5b sequence Length = 348 Score = 121 bits (61), Expect = 4e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 361 acttcgtcgccgactccgacaaggagaaggaggactggatcaactccatcggccgctcca 420 ||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||| |||| Sbjct: 1 acttcatcgccgactccgagcaggagaaggaggagtggataaactccatcggccgttcca 60 Query: 421 ttgtccagcactcccgatccatgaccgacgacgagatcgtcgactacgacagc 473 | |||||||||||||| ||| | |||||| |||| ||||||||||||||||| Sbjct: 61 tcgtccagcactcccgctccgtcaccgactccgaggtcgtcgactacgacagc 113
>gb|DQ455760.1| Oenocarpus bataua clone Ob09 microsatellite F6-5b sequence Length = 326 Score = 107 bits (54), Expect = 6e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 372 gactccgacaaggagaaggaggactggatcaactccatcggccgctccattgtccagcac 431 |||||||| ||||||||||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct: 326 gactccgagcaggagaaggaggagtggataaactccatcggccgttccatcgtccagcac 267 Query: 432 tcccgatccatgaccgacgacgagatcgtcgactacgacagc 473 ||||| ||| | |||||| |||| ||||||||||||||||| Sbjct: 266 tcccgctccgtcaccgactccgaggtcgtcgactacgacagc 225
>gb|AC182573.2| Mimulus guttatus clone MGBa-78L5, complete sequence Length = 102108 Score = 95.6 bits (48), Expect = 2e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 152 caagcagggcgagtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaa 211 |||||| |||||||||||||| || ||||| || || |||||||| || |||||||| || Sbjct: 73715 caagcaaggcgagtacatcaaaacctggcgccgccgctggttcgtcctgaagcagggtaa 73656 Query: 212 gctcttctggttcaaggactcgaccgtcacgcgcgcgtccgtgccccgcggcgtcatcgc 271 | |||||||||||||||| ||| ||||||| ||||| ||| ||| || ||||| ||| | Sbjct: 73655 ggtcttctggttcaaggaatcggccgtcacacgcgcctcccggccgcgtggcgtgatccc 73596 Query: 272 cgtcgcctcctgcctcaccgtcaagggcgccgagga 307 || || ||||| |||||||||||||||||||| Sbjct: 73595 ggtggctaattgccttaccgtcaagggcgccgagga 73560 Score = 73.8 bits (37), Expect = 9e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 350 cgagaccatgtacttcgtcgccgactccgacaaggagaaggaggactggatcaactccat 409 |||||| ||||||||| ||||||| || || |||||||||||||||||||| || || || Sbjct: 73517 cgagacgatgtacttcatcgccgattcggagaaggagaaggaggactggattaattcgat 73458 Query: 410 cggccgctccattgtccagcactcc 434 || || |||||||| ||||||||| Sbjct: 73457 tgggcgatccattgttcagcactcc 73433
>emb|CT985298.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 483 Score = 87.7 bits (44), Expect = 6e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 354 accatgtacttcgtcgccgactccgacaaggagaaggaggactggatcaactccatcggc 413 ||||||| |||| ||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 8 accatgttcttcatcgccgactccgagaaggagaaggaggagtggatcaactcgatcggc 67 Query: 414 cgctccattgtccagcactc 433 || || || || |||||||| Sbjct: 68 cggtcgatcgtgcagcactc 87
>dbj|AK228937.1| Arabidopsis thaliana mRNA for AtPH1-like protein, complete cds, clone: RAFL16-25-A20 Length = 574 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 162 gagtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctgg 221 |||||||||||||| ||||| || || |||||||||||||| || ||||| ||||||||| Sbjct: 132 gagtacatcaagacttggcgacgccgatggttcgtgctcaaacaagggaaactcttctgg 191 Query: 222 ttcaaggactc 232 ||||| ||||| Sbjct: 192 ttcaaagactc 202
>gb|BT025503.1| Arabidopsis thaliana At5g05710 mRNA, complete cds Length = 435 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 162 gagtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctgg 221 |||||||||||||| ||||| || || |||||||||||||| || ||||| ||||||||| Sbjct: 115 gagtacatcaagacttggcgacgccgatggttcgtgctcaaacaagggaaactcttctgg 174 Query: 222 ttcaaggactc 232 ||||| ||||| Sbjct: 175 ttcaaagactc 185
>ref|NM_120653.3| Arabidopsis thaliana unknown protein (AT5G05710) mRNA, complete cds Length = 616 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 162 gagtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctgg 221 |||||||||||||| ||||| || || |||||||||||||| || ||||| ||||||||| Sbjct: 183 gagtacatcaagacttggcgacgccgatggttcgtgctcaaacaagggaaactcttctgg 242 Query: 222 ttcaaggactc 232 ||||| ||||| Sbjct: 243 ttcaaagactc 253
>gb|AY084482.1| Arabidopsis thaliana clone 109246 mRNA, complete sequence Length = 614 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 162 gagtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctgg 221 |||||||||||||| ||||| || || |||||||||||||| || ||||| ||||||||| Sbjct: 183 gagtacatcaagacttggcgacgccgatggttcgtgctcaaacaagggaaactcttctgg 242 Query: 222 ttcaaggactc 232 ||||| ||||| Sbjct: 243 ttcaaagactc 253
>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3 Length = 87835 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 162 gagtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctgg 221 |||||||||||||| ||||| || || |||||||||||||| || ||||| ||||||||| Sbjct: 36780 gagtacatcaagacttggcgacgccgatggttcgtgctcaaacaagggaaactcttctgg 36839 Query: 222 ttcaaggactc 232 ||||| ||||| Sbjct: 36840 ttcaaagactc 36850
>emb|BX833635.1|CNS09Z7N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL67ZD10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 559 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 162 gagtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctgg 221 |||||||||||||| ||||| || || |||||||||||||| || ||||| ||||||||| Sbjct: 125 gagtacatcaagacttggcgacgccgatggttcgtgctcaaacaagggaaactcttctgg 184 Query: 222 ttcaaggactc 232 ||||| ||||| Sbjct: 185 ttcaaagactc 195
>gb|AY961924.1| Picea abies dehydrin 1 (Dhn) mRNA, complete cds Length = 678 Score = 71.9 bits (36), Expect = 4e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 358 tgtacttcgtcgccgactccgacaaggagaaggaggactggatcaactccatcggccgct 417 |||||||| |||| ||| ||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 612 tgtacttcatcgcagacagcgataaggagaaggaggagtggatcaattccatcggccgct 671 Query: 418 ccat 421 |||| Sbjct: 672 ccat 675
>gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene cluster, complete sequence Length = 10607 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 302 cgaggacgtgctcaaccgcaagttcgccttcgagctctccaccccgggcgagaccatgta 361 ||||||||||||||||||| ||||||| || || ||||||||||| ||| |||||||| Sbjct: 6708 cgaggacgtgctcaaccgccagttcgcgtttgaaatctccaccccgaccgacaccatgta 6649 Query: 362 ct 363 || Sbjct: 6648 ct 6647
>gb|DQ306834.1| Hevea brasiliensis isolate SSH105 mRNA sequence Length = 341 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 354 accatgtacttcgtcgccgactccgacaaggagaaggaggactggatcaactccatcggc 413 |||||||| || ||||||| ||||| |||||||||||||| |||||||| || || || Sbjct: 185 accatgtattttatcgccgattccgagaaggagaaggaggagtggatcaattcgattgga 126 Query: 414 cgctccattgtccagcactc 433 | |||||||| |||||||| Sbjct: 125 aggtccattgtgcagcactc 106
>ref|NM_173986.2| Bos taurus v-akt murine thymoma viral oncogene homolog 1 (AKT1), mRNA emb|X61036.1|BTPKB B.taurus mRNA for protein kinase B Length = 1691 Score = 48.1 bits (24), Expect = 0.051 Identities = 36/40 (90%) Strand = Plus / Plus Query: 144 tggctggacaagcagggcgagtacatcaagacgtggcggc 183 |||||| |||||| || |||||||||||||||||||||| Sbjct: 112 tggctgcacaagcgaggtgagtacatcaagacgtggcggc 151
>gb|AY781100.1| Bos taurus v-akt murine thymoma viral oncogene-like protein 1 mRNA, complete cds Length = 1443 Score = 48.1 bits (24), Expect = 0.051 Identities = 36/40 (90%) Strand = Plus / Plus Query: 144 tggctggacaagcagggcgagtacatcaagacgtggcggc 183 |||||| |||||| || |||||||||||||||||||||| Sbjct: 31 tggctgcacaagcgaggtgagtacatcaagacgtggcggc 70
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 ggcgtcatcgccgtcgcctcctgcctc 287 |||| |||||||||||||||||||||| Sbjct: 2659219 ggcgccatcgccgtcgcctcctgcctc 2659245
>dbj|AP005922.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1106C08 Length = 42380 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 ggcgtcatcgccgtcgcctcctgcctc 287 |||| |||||||||||||||||||||| Sbjct: 78 ggcgccatcgccgtcgcctcctgcctc 104
>dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0006E02 Length = 141782 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 ggcgtcatcgccgtcgcctcctgcctc 287 |||| |||||||||||||||||||||| Sbjct: 104497 ggcgccatcgccgtcgcctcctgcctc 104523
>ref|XM_359965.1| Magnaporthe grisea 70-15 hypothetical protein (MG05340.4) partial mRNA Length = 2253 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 203 gcaggggaagctcttctggttc 224 |||||||||||||||||||||| Sbjct: 53 gcaggggaagctcttctggttc 74
>ref|XM_864290.1| PREDICTED: Bos taurus similar to Cytohesin-1 (SEC7 homolog B2-1), transcript variant 2 (LOC508027), mRNA Length = 3087 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 aggagaaggaggactggatcaa 403 |||||||||||||||||||||| Sbjct: 1188 aggagaaggaggactggatcaa 1209
>ref|XM_872657.1| PREDICTED: Bos taurus similar to Cytohesin-1 (SEC7 homolog B2-1), transcript variant 4 (LOC508027), mRNA Length = 3156 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 aggagaaggaggactggatcaa 403 |||||||||||||||||||||| Sbjct: 1257 aggagaaggaggactggatcaa 1278
>ref|XM_872550.1| PREDICTED: Bos taurus similar to Cytohesin-1 (SEC7 homolog B2-1), transcript variant 3 (LOC508027), mRNA Length = 3135 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 aggagaaggaggactggatcaa 403 |||||||||||||||||||||| Sbjct: 1236 aggagaaggaggactggatcaa 1257
>ref|XM_584747.2| PREDICTED: Bos taurus similar to Cytohesin-1 (SEC7 homolog B2-1), transcript variant 1 (LOC508027), mRNA Length = 3084 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 aggagaaggaggactggatcaa 403 |||||||||||||||||||||| Sbjct: 1185 aggagaaggaggactggatcaa 1206
>emb|AL137781.18| Human DNA sequence from clone RP11-263K14 on chromosome 13q22.3-31.3, complete sequence Length = 147978 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 aagcaggggaagctcttctggt 222 |||||||||||||||||||||| Sbjct: 50473 aagcaggggaagctcttctggt 50494
>emb|BX821240.1|CNS0A8B4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL28ZE09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 630 Score = 44.1 bits (22), Expect = 0.80 Identities = 61/74 (82%) Strand = Plus / Plus Query: 153 aagcagggcgagtacatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaag 212 ||||| ||||| ||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 151 aagcaaggcgataacatcaaaacctggcgtcgtcgttggttcgttctcaaacgagggaag 210 Query: 213 ctcttctggttcaa 226 || ||||||||||| Sbjct: 211 cttttctggttcaa 224
>ref|XM_308030.2| Anopheles gambiae str. PEST ENSANGP00000019348 (ENSANGG00000016859), partial mRNA Length = 2112 Score = 44.1 bits (22), Expect = 0.80 Identities = 34/38 (89%) Strand = Plus / Plus Query: 144 tggctggacaagcagggcgagtacatcaagacgtggcg 181 |||||| |||||| |||||| |||||||||||||||| Sbjct: 91 tggctgtacaagcggggcgaacacatcaagacgtggcg 128
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 ccatcggccgctccattgtccagca 430 |||||||||||||||| |||||||| Sbjct: 1824884 ccatcggccgctccatcgtccagca 1824908
>gb|AC186550.3| Gallus gallus BAC clone TAM32-52P23 from chromosome z, complete sequence Length = 146558 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 aagcaggggaagctcttctgg 221 ||||||||||||||||||||| Sbjct: 105707 aagcaggggaagctcttctgg 105727
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atgaccgacgacgagatcgtc 461 ||||||||||||||||||||| Sbjct: 4904666 atgaccgacgacgagatcgtc 4904646
>gb|AC184089.2| Populus trichocarpa clone Pop1-58K16, complete sequence Length = 103310 Score = 42.1 bits (21), Expect = 3.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 166 acatcaagacgtggcggcggcggtggttcgtgctcaagcaggggaagctcttctggttca 225 |||||||||| ||| | || ||||||||| | | || || ||||||||||||||||||| Sbjct: 28539 acatcaagacatggagacgccggtggttcattttaaaacaagggaagctcttctggttca 28480 Query: 226 a 226 | Sbjct: 28479 a 28479
>ref|XM_687492.1| PREDICTED: Danio rerio similar to Cytohesin 3 (SEC7 homolog C) (msec7-3) (LOC564133), mRNA Length = 485 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 382 aggagaaggaggactggatcaactccatc 410 ||||||||||||| |||||||| |||||| Sbjct: 329 aggagaaggaggagtggatcaagtccatc 357
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 caccggcgccccgtccgcgtccgcggacg 99 |||||||||||||||||||| ||| |||| Sbjct: 3315668 caccggcgccccgtccgcgtacgccgacg 3315640
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ctcgaccgtcacgcgcgcgtc 250 ||||||||||||||||||||| Sbjct: 4051961 ctcgaccgtcacgcgcgcgtc 4051941
>gb|AC145765.2| Gasterosteus aculeatus clone CH213-7I21, complete sequence Length = 209087 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 acatcaagacgtggcggcggcggtg 190 |||||| |||||||||||||||||| Sbjct: 2253 acatcatgacgtggcggcggcggtg 2229
>emb|AJ459419.1|TRU459419 Takifugu rubripes cacng5 gene, prkca gene and putative LINE-like retrotransposon, cosmids C012B17 and C123B01 Length = 64219 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 382 aggagaaggaggactggatcaactccatc 410 ||||||||||||| |||||||| |||||| Sbjct: 60938 aggagaaggaggagtggatcaaatccatc 60910
>dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1460_H08 Length = 113514 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 515 gattggcgagcaaaaggaccggtga 539 |||||||||||||| |||||||||| Sbjct: 23124 gattggcgagcaaacggaccggtga 23148
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 aagacgtggcggcggcggtgg 191 ||||||||||||||||||||| Sbjct: 410500 aagacgtggcggcggcggtgg 410480
>gb|M33161.1|HALHPA H.volcanii histidinol-phosphate-aminotransferase (hisC) gene, complete cds Length = 1317 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 caagggcgccgaggacgtgctcaaccgca 321 |||| |||||| ||||||||||||||||| Sbjct: 1152 caagcgcgccgtggacgtgctcaaccgca 1180 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 108,973,551 Number of extensions: 6590580 Number of successful extensions: 150766 Number of sequences better than 10.0: 52 Number of HSP's gapped: 150752 Number of HSP's successfully gapped: 64 Length of query: 835 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 813 Effective length of database: 18,508,616,841 Effective search space: 15047505491733 Effective search space used: 15047505491733 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
