ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf77k09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073623.1| Oryza sativa (japonica cultivar-group) Os12g0572400 (Os12g0572400) mRNA, complete cds Length = 1250 Score = 494 bits (249), Expect = e-136 Identities = 391/437 (89%), Gaps = 6/437 (1%) Strand = Plus / Plus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 111 cgcagtccccctaggaggggctatggtggcagaggaagaagtccccctaggagggg---a 167 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 168 tatggaggacggagggagcagggttctggaagtctcttggtccgcaacatcccattaagc 227 Query: 328 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 387 ||||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||| Sbjct: 228 tgcagaggggaggatcttcgagttccttttgaaaggtttggtcctgttcgggatgtttac 287 Query: 388 cttccgaaggattattacagcggggagccacgagggtttgcgtttgtggagtttgttgac 447 || || |||||||||||||||||||| ||||| || ||||| ||||||||||| |||||| Sbjct: 288 ctgccaaaggattattacagcggggaaccacggggatttgcatttgtggagttcgttgac 347 Query: 448 ccttatgacgcctctgaggcccaatatcacatgaatcgccaggtattttttggccgtgag 507 |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 348 ccttatgatgcctctgaggctcaatatcacatgaatcgccaggtgtttttcggccgggag 407 Query: 508 ataactgttgtgcttgctgctgagtcacggaagaggccagaggatatgcgcactagaact 567 ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||| |||| || Sbjct: 408 ataactgttgttcttgctgctgagtcgcggaaaaggccagaggaaatgcgcagtagagct 467 Query: 568 agagtcagtggttattctagaggtcatgaagggcgccgttcctctcattatgggaggtct 627 |||||||| ||||| ||| || | ||||||||||| || || |||||||||||||| Sbjct: 468 agagtcaggggttactct---ggaaacgaagggcgccgctcttcatattatgggaggtct 524 Query: 628 cgttcccgttcacgctc 644 ||||||||||| ||||| Sbjct: 525 cgttcccgttctcgctc 541 Score = 147 bits (74), Expect = 1e-31 Identities = 252/313 (80%), Gaps = 3/313 (0%) Strand = Plus / Plus Query: 679 cggtcaaggtcatactctcctgctccaagacggcgggatgactactctgcttccccacgg 738 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 564 cggtcaaggtcatactctcctgctccaagacggcgagatgactactcagcttccccaccg 623 Query: 739 ggaagggagtctcatcgctcgaaatctcctgtgcgtcatccgaaagaac---atgaagag 795 ||| ||| | || | | | ||||||||| |||||| || ||||||| |||||||| Sbjct: 624 agaaaggatacgcaccccacaaaatctcctaggcgtcagccaaaagaacatgatgaagag 683 Query: 796 gacaaaaggagatcctactnnnnnnntggtagagatggcggccagcgtgatgctgataat 855 | || |||||||||||| |||||||||||| || || ||||||||||| Sbjct: 684 aagaagcggagatcctactctcctgccagtagagatggcgaccctcgcgatgctgataac 743 Query: 856 ggttatgagaagaggtcgccactggctgacagtgatggatccccttcactgcagagggtg 915 |||||||||||||||||||| | ||||||| |||||||||||| ||| | |||| Sbjct: 744 ggttatgagaagaggtcgcccccacctgacagcgatggatcccctccacaccggaggtct 803 Query: 916 gccaggccatcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctccc 975 | |||| |||||||||||||| || ||||||||||| |||||| |||| | ||| || Sbjct: 804 cctaggcactcctcagggtcgcctccaggatcccgctctaggtccgccgatgtttcccct 863 Query: 976 gcccgcagcgact 988 ||||||||||||| Sbjct: 864 gcccgcagcgact 876 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 100 atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 149 ||||||||||||||||| ||| | || |||||||| |||||||| ||||| Sbjct: 87 atgaggaggtacagcccaccatatcgcagtccccctaggaggggctatgg 136 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| |||||||| |||||||| ||||||||||| Sbjct: 109 atcgcagtccccctaggaggggctatggtggcag 142
>dbj|AK065531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034H02, full insert sequence Length = 1250 Score = 494 bits (249), Expect = e-136 Identities = 391/437 (89%), Gaps = 6/437 (1%) Strand = Plus / Plus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 111 cgcagtccccctaggaggggctatggtggcagaggaagaagtccccctaggagggg---a 167 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 168 tatggaggacggagggagcagggttctggaagtctcttggtccgcaacatcccattaagc 227 Query: 328 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 387 ||||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||| Sbjct: 228 tgcagaggggaggatcttcgagttccttttgaaaggtttggtcctgttcgggatgtttac 287 Query: 388 cttccgaaggattattacagcggggagccacgagggtttgcgtttgtggagtttgttgac 447 || || |||||||||||||||||||| ||||| || ||||| ||||||||||| |||||| Sbjct: 288 ctgccaaaggattattacagcggggaaccacggggatttgcatttgtggagttcgttgac 347 Query: 448 ccttatgacgcctctgaggcccaatatcacatgaatcgccaggtattttttggccgtgag 507 |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 348 ccttatgatgcctctgaggctcaatatcacatgaatcgccaggtgtttttcggccgggag 407 Query: 508 ataactgttgtgcttgctgctgagtcacggaagaggccagaggatatgcgcactagaact 567 ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||| |||| || Sbjct: 408 ataactgttgttcttgctgctgagtcgcggaaaaggccagaggaaatgcgcagtagagct 467 Query: 568 agagtcagtggttattctagaggtcatgaagggcgccgttcctctcattatgggaggtct 627 |||||||| ||||| ||| || | ||||||||||| || || |||||||||||||| Sbjct: 468 agagtcaggggttactct---ggaaacgaagggcgccgctcttcatattatgggaggtct 524 Query: 628 cgttcccgttcacgctc 644 ||||||||||| ||||| Sbjct: 525 cgttcccgttctcgctc 541 Score = 147 bits (74), Expect = 1e-31 Identities = 252/313 (80%), Gaps = 3/313 (0%) Strand = Plus / Plus Query: 679 cggtcaaggtcatactctcctgctccaagacggcgggatgactactctgcttccccacgg 738 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 564 cggtcaaggtcatactctcctgctccaagacggcgagatgactactcagcttccccaccg 623 Query: 739 ggaagggagtctcatcgctcgaaatctcctgtgcgtcatccgaaagaac---atgaagag 795 ||| ||| | || | | | ||||||||| |||||| || ||||||| |||||||| Sbjct: 624 agaaaggatacgcaccccacaaaatctcctaggcgtcagccaaaagaacatgatgaagag 683 Query: 796 gacaaaaggagatcctactnnnnnnntggtagagatggcggccagcgtgatgctgataat 855 | || |||||||||||| |||||||||||| || || ||||||||||| Sbjct: 684 aagaagcggagatcctactctcctgcaagtagagatggcgaccctcgcgatgctgataac 743 Query: 856 ggttatgagaagaggtcgccactggctgacagtgatggatccccttcactgcagagggtg 915 |||||||||||||||||||| | ||||||| |||||||||||| ||| | |||| Sbjct: 744 ggttatgagaagaggtcgcccccacctgacagcgatggatcccctccacaccggaggtct 803 Query: 916 gccaggccatcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctccc 975 | |||| |||||||||||||| || ||||||||||| |||||| |||| | ||| || Sbjct: 804 cctaggcactcctcagggtcgcctccaggatcccgctctaggtccgccgatgtttcccct 863 Query: 976 gcccgcagcgact 988 ||||||||||||| Sbjct: 864 gcccgcagcgact 876 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 100 atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 149 ||||||||||||||||| ||| | || |||||||| |||||||| ||||| Sbjct: 87 atgaggaggtacagcccaccatatcgcagtccccctaggaggggctatgg 136 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| |||||||| |||||||| ||||||||||| Sbjct: 109 atcgcagtccccctaggaggggctatggtggcag 142
>ref|NM_001052983.1| Oryza sativa (japonica cultivar-group) Os02g0252100 (Os02g0252100) mRNA, complete cds Length = 1265 Score = 442 bits (223), Expect = e-120 Identities = 496/586 (84%), Gaps = 12/586 (2%) Strand = Plus / Plus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 206 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| ||||| ||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 207 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 266 Query: 328 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 387 ||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||| Sbjct: 267 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 326 Query: 388 cttccgaaggattattacagcggggagccacgagggtttgcgtttgtggagtttgttgac 447 || || ||||||||||| | |||||| || ||||||||||| || ||||||||||||||| Sbjct: 327 ctgccaaaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgac 386 Query: 448 ccttatgacgcctctgaggcccaatatcacatgaatcgccaggtattttttggccgtgag 507 |||||||| || ||||||||||||||||| |||||||| ||||| |||||||||| ||| Sbjct: 387 ccttatgatgcttctgaggcccaatatcatatgaatcgtcaggtggtttttggccgggag 446 Query: 508 ataactgttgtgcttgctgctgagtcacggaagaggccagaggatatgcgcactagaact 567 ||||||||||| |||||||||||||||||||| |||||||| || ||||||| |||| | Sbjct: 447 ataactgttgttcttgctgctgagtcacggaaaaggccagaagagatgcgcagtagagcc 506 Query: 568 agagtcagtggttattctagaggtcatgaagggcgccgttcctctcattatgggaggtct 627 |||||||| || || ||| | |||||||| || ||||| || ||||| ||||||||| Sbjct: 507 agagtcagagggtactct---gaccatgaaggccgtcgttcatcccattacgggaggtct 563 Query: 628 cgttcccgttcacgctccgcctctccccgccctcgtggcggtggtcgcgctcggtcaagg 687 ||||| ||||| || ||| ||||||||| || ||||||| | ||||||||| Sbjct: 564 cgttcacgttcgcgttcccgctctccccgttatc------gtggtcgtccacggtcaagg 617 Query: 688 tcatactctcctgctccaagacggcgggatgactactctgcttccccacggggaagggag 747 ||||||||||||||||||||||| || |||||||| || || ||||||| | ||| || Sbjct: 618 tcatactctcctgctccaagacgacgagatgactattccgcatccccacagagaaaagac 677 Query: 748 tctcatcgctcgaaatctcctgtgcgtcatccgaaagaacatgaag 793 | ||||| | ||||||||| |||||| || ||||||||||||| Sbjct: 678 acacatcgtgcaaaatctcctaggcgtcagccaaaagaacatgaag 723 Score = 109 bits (55), Expect = 2e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 840 gcgtgatgctgataatggttatgagaagaggtcgccactggctgacagtgatggatcccc 899 |||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||||| Sbjct: 773 gcgtgatgctgataatggttatgaaaagaggtcgccgccagctgacagcgatggatcccc 832 Query: 900 ttcactgcagagggtggccaggccatcctcagggtcgccccctggatcccgctccaggtc 959 | | | | |||| |||||| ||||||||| ||||| || ||||||||||||||||| Sbjct: 833 tccgcaccggaggtcccccaggcaatcctcaggatcgcctccaggatcccgctccaggtc 892 Query: 960 ccccgacgcttctcccgcccgcagcgactaa 990 |||||| ||||| |||||||| |||||| Sbjct: 893 tgccgacgggtctcctgcccgcagtgactaa 923 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| ||||| ||||||||||||||||||||||| Sbjct: 148 atcgcagtccaccaaggaggggatatggtggcag 181
>gb|AF139211.2| Oryza sativa pre-mRNA splicing factor mRNA, complete cds Length = 1190 Score = 442 bits (223), Expect = e-120 Identities = 496/586 (84%), Gaps = 12/586 (2%) Strand = Plus / Plus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 151 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 207 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| ||||| ||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 208 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 267 Query: 328 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 387 ||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||| Sbjct: 268 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 327 Query: 388 cttccgaaggattattacagcggggagccacgagggtttgcgtttgtggagtttgttgac 447 || || ||||||||||| | |||||| || ||||||||||| || ||||||||||||||| Sbjct: 328 ctgccaaaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgac 387 Query: 448 ccttatgacgcctctgaggcccaatatcacatgaatcgccaggtattttttggccgtgag 507 |||||||| || ||||||||||||||||| |||||||| ||||| |||||||||| ||| Sbjct: 388 ccttatgatgcttctgaggcccaatatcatatgaatcgtcaggtggtttttggccgggag 447 Query: 508 ataactgttgtgcttgctgctgagtcacggaagaggccagaggatatgcgcactagaact 567 ||||||||||| |||||||||||||||||||| |||||||| || ||||||| |||| | Sbjct: 448 ataactgttgttcttgctgctgagtcacggaaaaggccagaagagatgcgcagtagagcc 507 Query: 568 agagtcagtggttattctagaggtcatgaagggcgccgttcctctcattatgggaggtct 627 |||||||| || || ||| | |||||||| || ||||| || ||||| ||||||||| Sbjct: 508 agagtcagagggtactct---gaccatgaaggccgtcgttcatcccattacgggaggtct 564 Query: 628 cgttcccgttcacgctccgcctctccccgccctcgtggcggtggtcgcgctcggtcaagg 687 ||||| ||||| || ||| ||||||||| || ||||||| | ||||||||| Sbjct: 565 cgttcacgttcgcgttcccgctctccccgttatc------gtggtcgtccacggtcaagg 618 Query: 688 tcatactctcctgctccaagacggcgggatgactactctgcttccccacggggaagggag 747 ||||||||||||||||||||||| || |||||||| || || ||||||| | ||| || Sbjct: 619 tcatactctcctgctccaagacgacgagatgactattccgcatccccacagagaaaagac 678 Query: 748 tctcatcgctcgaaatctcctgtgcgtcatccgaaagaacatgaag 793 | ||||| | ||||||||| |||||| || ||||||||||||| Sbjct: 679 acacatcgtgcaaaatctcctaggcgtcagccaaaagaacatgaag 724 Score = 109 bits (55), Expect = 2e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 840 gcgtgatgctgataatggttatgagaagaggtcgccactggctgacagtgatggatcccc 899 |||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||||| Sbjct: 774 gcgtgatgctgataatggttatgaaaagaggtcgccgccagctgacagcgatggatcccc 833 Query: 900 ttcactgcagagggtggccaggccatcctcagggtcgccccctggatcccgctccaggtc 959 | | | | |||| |||||| ||||||||| ||||| || ||||||||||||||||| Sbjct: 834 tccgcaccggaggtcccccaggcaatcctcaggatcgcctccaggatcccgctccaggtc 893 Query: 960 ccccgacgcttctcccgcccgcagcgactaa 990 |||||| ||||| |||||||| |||||| Sbjct: 894 tgccgacgggtctcctgcccgcagtgactaa 924 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| ||||| ||||||||||||||||||||||| Sbjct: 149 atcgcagtccaccaaggaggggatatggtggcag 182
>dbj|AK099051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151F04, full insert sequence Length = 1177 Score = 442 bits (223), Expect = e-120 Identities = 496/586 (84%), Gaps = 12/586 (2%) Strand = Plus / Plus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 151 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 207 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| ||||| ||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 208 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 267 Query: 328 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 387 ||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||| Sbjct: 268 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 327 Query: 388 cttccgaaggattattacagcggggagccacgagggtttgcgtttgtggagtttgttgac 447 || || ||||||||||| | |||||| || ||||||||||| || ||||||||||||||| Sbjct: 328 ctgccaaaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgac 387 Query: 448 ccttatgacgcctctgaggcccaatatcacatgaatcgccaggtattttttggccgtgag 507 |||||||| || ||||||||||||||||| |||||||| ||||| |||||||||| ||| Sbjct: 388 ccttatgatgcttctgaggcccaatatcatatgaatcgtcaggtggtttttggccgggag 447 Query: 508 ataactgttgtgcttgctgctgagtcacggaagaggccagaggatatgcgcactagaact 567 ||||||||||| |||||||||||||||||||| |||||||| || ||||||| |||| | Sbjct: 448 ataactgttgttcttgctgctgagtcacggaaaaggccagaagagatgcgcagtagagcc 507 Query: 568 agagtcagtggttattctagaggtcatgaagggcgccgttcctctcattatgggaggtct 627 |||||||| || || ||| | |||||||| || ||||| || ||||| ||||||||| Sbjct: 508 agagtcagagggtactct---gaccatgaaggccgtcgttcatcccattacgggaggtct 564 Query: 628 cgttcccgttcacgctccgcctctccccgccctcgtggcggtggtcgcgctcggtcaagg 687 ||||| ||||| || ||| ||||||||| || ||||||| | ||||||||| Sbjct: 565 cgttcacgttcgcgttcccgctctccccgttatc------gtggtcgtccacggtcaagg 618 Query: 688 tcatactctcctgctccaagacggcgggatgactactctgcttccccacggggaagggag 747 ||||||||||||||||||||||| || |||||||| || || ||||||| | ||| || Sbjct: 619 tcatactctcctgctccaagacgacgagatgactattccgcatccccacagagaaaagac 678 Query: 748 tctcatcgctcgaaatctcctgtgcgtcatccgaaagaacatgaag 793 | ||||| | ||||||||| |||||| || ||||||||||||| Sbjct: 679 acacatcgtgcaaaatctcctaggcgtcagccaaaagaacatgaag 724 Score = 109 bits (55), Expect = 2e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 840 gcgtgatgctgataatggttatgagaagaggtcgccactggctgacagtgatggatcccc 899 |||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||||| Sbjct: 774 gcgtgatgctgataatggttatgaaaagaggtcgccgccagctgacagcgatggatcccc 833 Query: 900 ttcactgcagagggtggccaggccatcctcagggtcgccccctggatcccgctccaggtc 959 | | | | |||| |||||| ||||||||| ||||| || ||||||||||||||||| Sbjct: 834 tccgcaccggaggtcccccaggcaatcctcaggatcgcctccaggatcccgctccaggtc 893 Query: 960 ccccgacgcttctcccgcccgcagcgactaa 990 |||||| ||||| |||||||| |||||| Sbjct: 894 tgccgacgggtctcctgcccgcagtgactaa 924 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| ||||| ||||||||||||||||||||||| Sbjct: 149 atcgcagtccaccaaggaggggatatggtggcag 182
>dbj|AK062577.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D09, full insert sequence Length = 1265 Score = 434 bits (219), Expect = e-118 Identities = 495/586 (84%), Gaps = 12/586 (2%) Strand = Plus / Plus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 206 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| ||||| ||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 207 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 266 Query: 328 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 387 ||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||| Sbjct: 267 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 326 Query: 388 cttccgaaggattattacagcggggagccacgagggtttgcgtttgtggagtttgttgac 447 || || ||||||||||| | |||||| || ||||||||||| || ||||||||||||||| Sbjct: 327 ctgccaaaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgac 386 Query: 448 ccttatgacgcctctgaggcccaatatcacatgaatcgccaggtattttttggccgtgag 507 |||||||| || ||||||||||||||||| |||||||| ||||| |||||||||| ||| Sbjct: 387 ccttatgatgcttctgaggcccaatatcatatgaatcgtcaggtggtttttggccgggag 446 Query: 508 ataactgttgtgcttgctgctgagtcacggaagaggccagaggatatgcgcactagaact 567 |||||||||| |||||||||||||||||||| |||||||| || ||||||| |||| | Sbjct: 447 ataactgttgctcttgctgctgagtcacggaaaaggccagaagagatgcgcagtagagcc 506 Query: 568 agagtcagtggttattctagaggtcatgaagggcgccgttcctctcattatgggaggtct 627 |||||||| || || ||| | |||||||| || ||||| || ||||| ||||||||| Sbjct: 507 agagtcagagggtactct---gaccatgaaggccgtcgttcatcccattacgggaggtct 563 Query: 628 cgttcccgttcacgctccgcctctccccgccctcgtggcggtggtcgcgctcggtcaagg 687 ||||| ||||| || ||| ||||||||| || ||||||| | ||||||||| Sbjct: 564 cgttcacgttcgcgttcccgctctccccgttatc------gtggtcgtccacggtcaagg 617 Query: 688 tcatactctcctgctccaagacggcgggatgactactctgcttccccacggggaagggag 747 ||||||||||||||||||||||| || |||||||| || || ||||||| | ||| || Sbjct: 618 tcatactctcctgctccaagacgacgagatgactattccgcatccccacagagaaaagac 677 Query: 748 tctcatcgctcgaaatctcctgtgcgtcatccgaaagaacatgaag 793 | ||||| | ||||||||| |||||| || ||||||||||||| Sbjct: 678 acacatcgtgcaaaatctcctaggcgtcagccaaaagaacatgaag 723 Score = 109 bits (55), Expect = 2e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 840 gcgtgatgctgataatggttatgagaagaggtcgccactggctgacagtgatggatcccc 899 |||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||||| Sbjct: 773 gcgtgatgctgataatggttatgaaaagaggtcgccgccagctgacagcgatggatcccc 832 Query: 900 ttcactgcagagggtggccaggccatcctcagggtcgccccctggatcccgctccaggtc 959 | | | | |||| |||||| ||||||||| ||||| || ||||||||||||||||| Sbjct: 833 tccgcaccggaggtcccccaggcaatcctcaggatcgcctccaggatcccgctccaggtc 892 Query: 960 ccccgacgcttctcccgcccgcagcgactaa 990 |||||| ||||| |||||||| |||||| Sbjct: 893 tgccgacgggtctcctgcccgcagtgactaa 923 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| ||||| ||||||||||||||||||||||| Sbjct: 148 atcgcagtccaccaaggaggggatatggtggcag 181
>dbj|AB110200.1| Oryza sativa (japonica cultivar-group) mRNA for pre-mRNA splicing factor, partial cds, clone: pNS-C4A21 Length = 1003 Score = 414 bits (209), Expect = e-112 Identities = 325/363 (89%), Gaps = 3/363 (0%) Strand = Plus / Plus Query: 282 ggagcagggttctggaagtctcttggtccgcaacatcccactaagcgccagagcggagga 341 |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 5 ggagcagggttctggaagtctcttggtccgcaacatcccattaagctgcagaggggagga 64 Query: 342 tctccgtgttccttttgaaaggtttggtcctgttagggatgtttaccttccgaaggatta 401 ||| || ||||||||||||||||||||||||||| ||||||||||||| || |||||||| Sbjct: 65 tcttcgagttccttttgaaaggtttggtcctgttcgggatgtttacctgccaaaggatta 124 Query: 402 ttacagcggggagccacgagggtttgcgtttgtggagtttgttgacccttatgacgcctc 461 |||||||||||| ||||| || ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 125 ttacagcggggaaccacggggatttgcatttgtggagttcgttgacccttatgatgcctc 184 Query: 462 tgaggcccaatatcacatgaatcgccaggtattttttggccgtgagataactgttgtgct 521 |||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| || Sbjct: 185 tgaggctcaatatcacatgaatcgccaggtgtttttcggccgggagataactgttgttct 244 Query: 522 tgctgctgagtcacggaagaggccagaggatatgcgcactagaactagagtcagtggtta 581 |||||||||||| ||||| ||||||||||| ||||||| |||| |||||||||| ||||| Sbjct: 245 tgctgctgagtcgcggaaaaggccagaggaaatgcgcagtagagctagagtcaggggtta 304 Query: 582 ttctagaggtcatgaagggcgccgttcctctcattatgggaggtctcgttcccgttcacg 641 ||| || | ||||||||||| || || ||||||||||||||||||||||||| || Sbjct: 305 ctct---ggaaacgaagggcgccgctcttcatattatgggaggtctcgttcccgttctcg 361 Query: 642 ctc 644 ||| Sbjct: 362 ctc 364 Score = 147 bits (74), Expect = 1e-31 Identities = 252/313 (80%), Gaps = 3/313 (0%) Strand = Plus / Plus Query: 679 cggtcaaggtcatactctcctgctccaagacggcgggatgactactctgcttccccacgg 738 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 387 cggtcaaggtcatactctcctgctccaagacggcgagatgactactcagcttccccaccg 446 Query: 739 ggaagggagtctcatcgctcgaaatctcctgtgcgtcatccgaaagaac---atgaagag 795 ||| ||| | || | | | ||||||||| |||||| || ||||||| |||||||| Sbjct: 447 agaaaggatacgcaccccacaaaatctcctaggcgtcagccaaaagaacatgatgaagag 506 Query: 796 gacaaaaggagatcctactnnnnnnntggtagagatggcggccagcgtgatgctgataat 855 | || |||||||||||| |||||||||||| || || ||||||||||| Sbjct: 507 aagaagcggagatcctactctcctgccagtagagatggcgaccctcgcgatgctgataac 566 Query: 856 ggttatgagaagaggtcgccactggctgacagtgatggatccccttcactgcagagggtg 915 |||||||||||||||||||| | ||||||| |||||||||||| ||| | |||| Sbjct: 567 ggttatgagaagaggtcgcccccacctgacagcgatggatcccctccacaccggaggtct 626 Query: 916 gccaggccatcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctccc 975 | |||| |||||||||||||| || ||||||||||| |||||| |||| | ||| || Sbjct: 627 cctaggcactcctcagggtcgcctccaggatcccgctctaggtccgccgatgtttcccct 686 Query: 976 gcccgcagcgact 988 ||||||||||||| Sbjct: 687 gcccgcagcgact 699
>gb|AY105970.1| Zea mays PCO109569 mRNA sequence Length = 1186 Score = 307 bits (155), Expect = 5e-80 Identities = 371/441 (84%), Gaps = 9/441 (2%) Strand = Plus / Plus Query: 195 cagccccccgcaccgcagccccccaaggaggggatatggtggcagaggaagaagtccccc 254 ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 218 cagccccccttatcgcagcccccccaggaggggatatggtggcagaggaagaagcccccc 277 Query: 255 tagg---aggggtggatatggaggacgaaaggagcagggttctggaagtctcttggtccg 311 | ||| | |||||||||||||| |||||| ||| |||||| || |||||||| Sbjct: 278 tcctcccaggaggggatatggaggacgcaaggag---ggtagtggaagccttttggtccg 334 Query: 312 caacatcccactaagcgccagagcggaggatctccgtgttccttttgaaaggtttggtcc 371 |||||||||| |||| | ||||||||||||||| || |||||||||||||||||||| || Sbjct: 335 caacatcccattaagtgtcagagcggaggatcttcgagttccttttgaaaggtttggccc 394 Query: 372 tgttagggatgtttaccttccgaaggattattacagcggggagccacgagggtttgcgtt 431 |||| ||||||||||| |||| ||||| |||||| |||||||| ||||| ||||| || Sbjct: 395 tgttcgggatgtttacattccaaaggactattactctggggagcctcgaggatttgcctt 454 Query: 432 tgtggagtttgttgacccttatgacgcctctgaggcccaatatcacatgaatcgccaggt 491 ||| ||||||||||| ||||| || |||||||| ||||| ||||||||||||||||| || Sbjct: 455 tgtagagtttgttgatccttacgatgcctctgaagcccagtatcacatgaatcgccaagt 514 Query: 492 attttttggccgtgagataactgttgtgcttgctgctgagtcacggaagaggccagagga 551 || ||||| || || ||| ||||||| ||||||||||||||||| || |||||||| || Sbjct: 515 tttctttggtcgggaaatagctgttgttcttgctgctgagtcacgaaaaaggccagaaga 574 Query: 552 tatgcgcactagaactagagtcagtggttattctagaggtcatgaagggcgccgttcctc 611 ||||||| ||||||||||| || ||||| ||| ||||||||||| ||||| || || Sbjct: 575 aatgcgcagcagaactagagtaagaggttactct---ggtcatgaaggtcgccggtcttc 631 Query: 612 tcattatgggaggtctcgttc 632 | | ||||| |||||||||| Sbjct: 632 ttactatggtcggtctcgttc 652 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 677 ctcggtcaaggtcatactctcctgctccaagacggcgggatgactactctgc 728 ||||||| || |||||||||||||||||||| ||| || ||||||||||||| Sbjct: 679 ctcggtcgagatcatactctcctgctccaaggcgggggaatgactactctgc 730 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 940 cctggatcccgctccaggtcccccgacgcttctcc 974 ||||||||||||||||||||| |||||| |||||| Sbjct: 933 cctggatcccgctccaggtccgccgacgattctcc 967 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 843 tgatgctgataatggttatgagaagaggtcgccactggctgacagtgatggatc 896 ||||||||| |||| |||||||||||||||||| | || ||||| |||||||| Sbjct: 836 tgatgctgacaatgtttatgagaagaggtcgcccccagcagacagcgatggatc 889 Score = 44.1 bits (22), Expect = 1.2 Identities = 43/50 (86%) Strand = Plus / Plus Query: 100 atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 149 |||||||||||||||||||| | || || ||||| |||||||| ||||| Sbjct: 207 atgaggaggtacagccccccttatcgcagcccccccaggaggggatatgg 256 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 cccccaaggaggggatatggtggcag 197 ||||| |||||||||||||||||||| Sbjct: 237 ccccccaggaggggatatggtggcag 262
>gb|BT016700.1| Zea mays clone Contig533 mRNA sequence Length = 1081 Score = 297 bits (150), Expect = 5e-77 Identities = 370/441 (83%), Gaps = 8/441 (1%) Strand = Plus / Plus Query: 195 cagccccccgcaccgcagccccccaaggaggggatatggtggcagaggaagaagtcccc- 253 ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 86 cagccccccttatcgcagcccccccaggaggggatatggtggcagaggaagaagcccccc 145 Query: 254 --ctaggaggggtggatatggaggacgaaaggagcagggttctggaagtctcttggtccg 311 || ||| | |||||||||||||| | || ||||| ||||| || |||||||| Sbjct: 146 tcctcccaggaggggatatggaggacgcga--aggagggtaggggaagccttttggtccg 203 Query: 312 caacatcccactaagcgccagagcggaggatctccgtgttccttttgaaaggtttggtcc 371 |||||||||| |||||| ||||||||||||||| || |||||||||||||||||||| || Sbjct: 204 caacatcccattaagcgtcagagcggaggatcttcgagttccttttgaaaggtttggccc 263 Query: 372 tgttagggatgtttaccttccgaaggattattacagcggggagccacgagggtttgcgtt 431 |||| ||||||||||| |||| ||||| |||||| |||||||| ||||| ||||| || Sbjct: 264 tgttcgggatgtttacattccaaaggactattactctggggagcctcgaggatttgcctt 323 Query: 432 tgtggagtttgttgacccttatgacgcctctgaggcccaatatcacatgaatcgccaggt 491 ||| ||||||||||| ||||| || |||||||| ||||| ||||||||||||||||| || Sbjct: 324 tgtagagtttgttgatccttacgatgcctctgaagcccagtatcacatgaatcgccaagt 383 Query: 492 attttttggccgtgagataactgttgtgcttgctgctgagtcacggaagaggccagagga 551 || ||||| || || ||| ||||||| ||||||||||||||||| || |||||||| || Sbjct: 384 tttctttggtcgggaaatagctgttgttcttgctgctgagtcacgaaaaaggccagaaga 443 Query: 552 tatgcgcactagaactagagtcagtggttattctagaggtcatgaagggcgccgttcctc 611 ||||||| ||||||||||| || ||||| ||| ||||||||||| ||||| || || Sbjct: 444 aatgcgcagcagaactagagtaagaggttactct---ggtcatgaaggtcgccggtcttc 500 Query: 612 tcattatgggaggtctcgttc 632 | | ||||| |||||||||| Sbjct: 501 ttactatggtcggtctcgttc 521 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 677 ctcggtcaaggtcatactctcctgctccaagacggcgggatgactactctgc 728 ||||||| || |||||||||||||||||||| ||| || ||||||||||||| Sbjct: 548 ctcggtcgagatcatactctcctgctccaaggcgggggaatgactactctgc 599 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 843 tgatgctgataatggttatgagaagaggtcgccactggctgacagtgatggatc 896 ||||||||| |||| |||||||||||||||||| | || ||||| |||||||| Sbjct: 705 tgatgctgacaatgtttatgagaagaggtcgcccccagcagacagcgatggatc 758 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 940 cctggatcccgctccaggtcccccgacg 967 ||||||||||||||||||||| |||||| Sbjct: 802 cctggatcccgctccaggtccgccgacg 829 Score = 44.1 bits (22), Expect = 1.2 Identities = 43/50 (86%) Strand = Plus / Plus Query: 100 atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 149 |||||||||||||||||||| | || || ||||| |||||||| ||||| Sbjct: 75 atgaggaggtacagccccccttatcgcagcccccccaggaggggatatgg 124 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 cccccaaggaggggatatggtggcag 197 ||||| |||||||||||||||||||| Sbjct: 105 ccccccaggaggggatatggtggcag 130
>emb|CT829429.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120A06, full insert sequence Length = 1697 Score = 228 bits (115), Expect = 4e-56 Identities = 311/376 (82%), Gaps = 9/376 (2%) Strand = Plus / Plus Query: 418 cgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggcccaatatcac 477 ||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 908 cgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggcccaatatcat 967 Query: 478 atgaatcgccaggtattttttggccgtgagataactgttgtgcttgctgctgagtcacgg 537 |||||||| ||||| |||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 968 atgaatcgtcaggtggtttttggccgggagataactgttgttcttgctgctgagtcacgg 1027 Query: 538 aagaggccagaggatatgcgcactagaactagagtcagtggttattctagaggtcatgaa 597 || |||||||| || ||||||| |||| | |||||||| || || ||| | |||||| Sbjct: 1028 aaaaggccagaagagatgcgcagtagagccagagtcagagggtactct---gaccatgaa 1084 Query: 598 gggcgccgttcctctcattatgggaggtctcgttcccgttcacgctccgcctctccccgc 657 || || ||||| || ||||| |||||||||||||| ||||| || ||| ||||||||| Sbjct: 1085 ggccgtcgttcatcccattacgggaggtctcgttcacgttcgcgttcccgctctccccgt 1144 Query: 658 cctcgtggcggtggtcgcgctcggtcaaggtcatactctcctgctccaagacggcgggat 717 || ||||||| | |||||||||||||||||||||||||||||||| || ||| Sbjct: 1145 tatc------gtggtcgtccacggtcaaggtcatactctcctgctccaagacgacgagat 1198 Query: 718 gactactctgcttccccacggggaagggagtctcatcgctcgaaatctcctgtgcgtcat 777 ||||| || || ||||||| | ||| || | ||||| | ||||||||| |||||| Sbjct: 1199 gactattccgcatccccacagagaaaagacacacatcgtgcaaaatctcctaggcgtcag 1258 Query: 778 ccgaaagaacatgaag 793 || ||||||||||||| Sbjct: 1259 ccaaaagaacatgaag 1274 Score = 220 bits (111), Expect = 9e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 206 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| ||||| ||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 207 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 266 Query: 328 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 387 ||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||| Sbjct: 267 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 326 Query: 388 cttccgaaggattatta 404 || || ||||||||||| Sbjct: 327 ctgccaaaggattatta 343 Score = 117 bits (59), Expect = 1e-22 Identities = 137/163 (84%) Strand = Plus / Plus Query: 828 agatggcggccagcgtgatgctgataatggttatgagaagaggtcgccactggctgacag 887 |||||| | ||||||||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 1312 agatggggaccagcgtgatgctgataatggttatgaaaagaggtcgccgccagctgacag 1371 Query: 888 tgatggatccccttcactgcagagggtggccaggccatcctcagggtcgccccctggatc 947 |||||||||||| | | | |||| |||||| ||||||||| ||||| || ||||| Sbjct: 1372 cgatggatcccctccgcaccggaggtcccccaggcaatcctcaggatcgcctccaggatc 1431 Query: 948 ccgctccaggtcccccgacgcttctcccgcccgcagcgactaa 990 |||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 1432 ccgctccaggtctgccgacgggtctcctgcccgcagtgactaa 1474 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| ||||| ||||||||||||||||||||||| Sbjct: 148 atcgcagtccaccaaggaggggatatggtggcag 181
>emb|CT829428.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115H01, full insert sequence Length = 2136 Score = 228 bits (115), Expect = 4e-56 Identities = 311/376 (82%), Gaps = 9/376 (2%) Strand = Plus / Plus Query: 418 cgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggcccaatatcac 477 ||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 1329 cgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggcccaatatcat 1388 Query: 478 atgaatcgccaggtattttttggccgtgagataactgttgtgcttgctgctgagtcacgg 537 |||||||| ||||| |||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 1389 atgaatcgtcaggtggtttttggccgggagataactgttgttcttgctgctgagtcacgg 1448 Query: 538 aagaggccagaggatatgcgcactagaactagagtcagtggttattctagaggtcatgaa 597 || |||||||| || ||||||| |||| | |||||||| || || ||| | |||||| Sbjct: 1449 aaaaggccagaagagatgcgcagtagagccagagtcagagggtactct---gaccatgaa 1505 Query: 598 gggcgccgttcctctcattatgggaggtctcgttcccgttcacgctccgcctctccccgc 657 || || ||||| || ||||| |||||||||||||| ||||| || ||| ||||||||| Sbjct: 1506 ggccgtcgttcatcccattacgggaggtctcgttcacgttcgcgttcccgctctccccgt 1565 Query: 658 cctcgtggcggtggtcgcgctcggtcaaggtcatactctcctgctccaagacggcgggat 717 || ||||||| | |||||||||||||||||||||||||||||||| || ||| Sbjct: 1566 tatc------gtggtcgtccacggtcaaggtcatactctcctgctccaagacgacgagat 1619 Query: 718 gactactctgcttccccacggggaagggagtctcatcgctcgaaatctcctgtgcgtcat 777 ||||| || || ||||||| | ||| || | ||||| | ||||||||| |||||| Sbjct: 1620 gactattccgcatccccacagagaaaagacacacatcgtgcaaaatctcctaggcgtcag 1679 Query: 778 ccgaaagaacatgaag 793 || ||||||||||||| Sbjct: 1680 ccaaaagaacatgaag 1695 Score = 220 bits (111), Expect = 9e-54 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 153 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagggg---a 209 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| ||||| ||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 210 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagc 269 Query: 328 gccagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttac 387 ||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||| Sbjct: 270 tgcagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttac 329 Query: 388 cttccgaaggattatta 404 || || ||||||||||| Sbjct: 330 ctgccaaaggattatta 346 Score = 117 bits (59), Expect = 1e-22 Identities = 137/163 (84%) Strand = Plus / Plus Query: 828 agatggcggccagcgtgatgctgataatggttatgagaagaggtcgccactggctgacag 887 |||||| | ||||||||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 1733 agatggggaccagcgtgatgctgataatggttatgaaaagaggtcgccgccagctgacag 1792 Query: 888 tgatggatccccttcactgcagagggtggccaggccatcctcagggtcgccccctggatc 947 |||||||||||| | | | |||| |||||| ||||||||| ||||| || ||||| Sbjct: 1793 cgatggatcccctccgcaccggaggtcccccaggcaatcctcaggatcgcctccaggatc 1852 Query: 948 ccgctccaggtcccccgacgcttctcccgcccgcagcgactaa 990 |||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 1853 ccgctccaggtctgccgacgggtctcctgcccgcagtgactaa 1895 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| ||||| ||||||||||||||||||||||| Sbjct: 151 atcgcagtccaccaaggaggggatatggtggcag 184
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 202 bits (102), Expect = 2e-48 Identities = 150/166 (90%) Strand = Plus / Minus Query: 410 gggagccacgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggccc 469 |||| ||||| || ||||| ||||||||||| |||||||||||||| ||||||||||| | Sbjct: 23624911 gggaaccacggggatttgcatttgtggagttcgttgacccttatgatgcctctgaggctc 23624852 Query: 470 aatatcacatgaatcgccaggtattttttggccgtgagataactgttgtgcttgctgctg 529 |||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||| Sbjct: 23624851 aatatcacatgaatcgccaggtgtttttcggccgggagataactgttgttcttgctgctg 23624792 Query: 530 agtcacggaagaggccagaggatatgcgcactagaactagagtcag 575 |||| ||||| ||||||||||| ||||||| |||| |||||||||| Sbjct: 23624791 agtcgcggaaaaggccagaggaaatgcgcagtagagctagagtcag 23624746 Score = 163 bits (82), Expect = 2e-36 Identities = 111/120 (92%), Gaps = 3/120 (2%) Strand = Plus / Minus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 23626145 cgcagtccccctaggaggggctatggtggcagaggaagaagtccccctaggagggg---a 23626089 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 23626088 tatggaggacggagggagcagggttctggaagtctcttggtccgcaacatcccattaagc 23626029 Score = 115 bits (58), Expect = 4e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 330 cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 389 ||||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 23625888 cagaggggaggatcttcgagttccttttgaaaggtttggtcctgttcgggatgtttacct 23625829 Query: 390 tccgaaggattattacagcggg 411 || |||||||||||||||||| Sbjct: 23625828 gccaaaggattattacagcggg 23625807 Score = 89.7 bits (45), Expect = 2e-14 Identities = 51/53 (96%) Strand = Plus / Minus Query: 684 aaggtcatactctcctgctccaagacggcgggatgactactctgcttccccac 736 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 23618755 aaggtcatactctcctgctccaagacggcgagatgactactcagcttccccac 23618703 Score = 89.7 bits (45), Expect = 2e-14 Identities = 51/53 (96%) Strand = Plus / Minus Query: 684 aaggtcatactctcctgctccaagacggcgggatgactactctgcttccccac 736 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 23624261 aaggtcatactctcctgctccaagacggcgagatgactactcagcttccccac 23624209 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 925 tcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctcccgcccgcagc 984 |||||||||||||| || ||||||||||| |||||| |||| | ||| || ||||||||| Sbjct: 23618220 tcctcagggtcgcctccaggatcccgctctaggtccgccgatgtttcccctgcccgcagc 23618161 Query: 985 gact 988 |||| Sbjct: 23618160 gact 23618157 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 925 tcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctcccgcccgcagc 984 |||||||||||||| || ||||||||||| |||||| |||| | ||| || ||||||||| Sbjct: 23623726 tcctcagggtcgcctccaggatcccgctctaggtccgccgatgtttcccctgcccgcagc 23623667 Query: 985 gact 988 |||| Sbjct: 23623666 gact 23623663 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Minus Query: 100 atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 149 ||||||||||||||||| ||| | || |||||||| |||||||| ||||| Sbjct: 23626169 atgaggaggtacagcccaccatatcgcagtccccctaggaggggctatgg 23626120 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 619 gggaggtctcgttcccgttcacgctc 644 |||||||||||||||||||| ||||| Sbjct: 23618882 gggaggtctcgttcccgttctcgctc 23618857 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 619 gggaggtctcgttcccgttcacgctc 644 |||||||||||||||||||| ||||| Sbjct: 23624388 gggaggtctcgttcccgttctcgctc 23624363 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| |||||||| |||||||| ||||||||||| Sbjct: 23626147 atcgcagtccccctaggaggggctatggtggcag 23626114
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 202 bits (102), Expect = 2e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 410 gggagccacgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggccc 469 |||| ||||| || ||||| ||||||||||| |||||||||||||| ||||||||||| | Sbjct: 81499 gggaaccacggggatttgcatttgtggagttcgttgacccttatgatgcctctgaggctc 81558 Query: 470 aatatcacatgaatcgccaggtattttttggccgtgagataactgttgtgcttgctgctg 529 |||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||| Sbjct: 81559 aatatcacatgaatcgccaggtgtttttcggccgggagataactgttgttcttgctgctg 81618 Query: 530 agtcacggaagaggccagaggatatgcgcactagaactagagtcag 575 |||| ||||| ||||||||||| ||||||| |||| |||||||||| Sbjct: 81619 agtcgcggaaaaggccagaggaaatgcgcagtagagctagagtcag 81664 Score = 163 bits (82), Expect = 2e-36 Identities = 111/120 (92%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 80265 cgcagtccccctaggaggggctatggtggcagaggaagaagtccccctaggagggg---a 80321 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatcccactaagc 327 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 80322 tatggaggacggagggagcagggttctggaagtctcttggtccgcaacatcccattaagc 80381 Score = 115 bits (58), Expect = 4e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 330 cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 389 ||||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 80522 cagaggggaggatcttcgagttccttttgaaaggtttggtcctgttcgggatgtttacct 80581 Query: 390 tccgaaggattattacagcggg 411 || |||||||||||||||||| Sbjct: 80582 gccaaaggattattacagcggg 80603 Score = 89.7 bits (45), Expect = 2e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 684 aaggtcatactctcctgctccaagacggcgggatgactactctgcttccccac 736 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 82149 aaggtcatactctcctgctccaagacggcgagatgactactcagcttccccac 82201 Score = 89.7 bits (45), Expect = 2e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 684 aaggtcatactctcctgctccaagacggcgggatgactactctgcttccccac 736 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 87655 aaggtcatactctcctgctccaagacggcgagatgactactcagcttccccac 87707 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 925 tcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctcccgcccgcagc 984 |||||||||||||| || ||||||||||| |||||| |||| | ||| || ||||||||| Sbjct: 82684 tcctcagggtcgcctccaggatcccgctctaggtccgccgatgtttcccctgcccgcagc 82743 Query: 985 gact 988 |||| Sbjct: 82744 gact 82747 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 925 tcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctcccgcccgcagc 984 |||||||||||||| || ||||||||||| |||||| |||| | ||| || ||||||||| Sbjct: 88190 tcctcagggtcgcctccaggatcccgctctaggtccgccgatgtttcccctgcccgcagc 88249 Query: 985 gact 988 |||| Sbjct: 88250 gact 88253 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 100 atgaggaggtacagccccccacaccgtagtcccccgaggaggggttatgg 149 ||||||||||||||||| ||| | || |||||||| |||||||| ||||| Sbjct: 80241 atgaggaggtacagcccaccatatcgcagtccccctaggaggggctatgg 80290 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| |||||||| |||||||| ||||||||||| Sbjct: 80263 atcgcagtccccctaggaggggctatggtggcag 80296 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 619 gggaggtctcgttcccgttcacgctc 644 |||||||||||||||||||| ||||| Sbjct: 82022 gggaggtctcgttcccgttctcgctc 82047 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 619 gggaggtctcgttcccgttcacgctc 644 |||||||||||||||||||| ||||| Sbjct: 87528 gggaggtctcgttcccgttctcgctc 87553
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 186 bits (94), Expect = 1e-43 Identities = 142/158 (89%) Strand = Plus / Minus Query: 418 cgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggcccaatatcac 477 ||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 8554720 cgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggcccaatatcat 8554661 Query: 478 atgaatcgccaggtattttttggccgtgagataactgttgtgcttgctgctgagtcacgg 537 |||||||| ||||| |||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 8554660 atgaatcgtcaggtggtttttggccgggagataactgttgttcttgctgctgagtcacgg 8554601 Query: 538 aagaggccagaggatatgcgcactagaactagagtcag 575 || |||||||| || ||||||| |||| | |||||||| Sbjct: 8554600 aaaaggccagaagagatgcgcagtagagccagagtcag 8554563 Score = 149 bits (75), Expect = 3e-32 Identities = 104/113 (92%), Gaps = 3/113 (2%) Strand = Plus / Minus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 8556258 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagg---gga 8556202 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatccc 320 ||||||||||| ||||| ||||||||||| |||||| |||||||||||||||| Sbjct: 8556201 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccc 8556149 Score = 85.7 bits (43), Expect = 4e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 330 cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 389 ||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||||| Sbjct: 8555779 cagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttacct 8555720 Query: 390 tccgaaggattatta 404 || ||||||||||| Sbjct: 8555719 gccaaaggattatta 8555705 Score = 67.9 bits (34), Expect = 8e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 917 ccaggccatcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctcccg 976 |||||| ||||||||| ||||| || ||||||||||||||||| |||||| ||||| | Sbjct: 8553373 ccaggcaatcctcaggatcgcctccaggatcccgctccaggtctgccgacgggtctcctg 8553314 Query: 977 cccgcagcgactaa 990 ||||||| |||||| Sbjct: 8553313 cccgcagtgactaa 8553300 Score = 67.9 bits (34), Expect = 8e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 684 aaggtcatactctcctgctccaagacggcgggatgactactctgcttccccacggggaag 743 ||||||||||||||||||||||||||| || |||||||| || || ||||||| | ||| Sbjct: 8554027 aaggtcatactctcctgctccaagacgacgagatgactattccgcatccccacagagaaa 8553968 Query: 744 ggagtctcatcgctcgaaatctcctgtgcgtcatccgaaagaacatgaag 793 || | ||||| | ||||||||| |||||| || ||||||||||||| Sbjct: 8553967 agacacacatcgtgcaaaatctcctaggcgtcagccaaaagaacatgaag 8553918 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| ||||| ||||||||||||||||||||||| Sbjct: 8556260 atcgcagtccaccaaggaggggatatggtggcag 8556227 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Minus Query: 840 gcgtgatgctgataatggttatga 863 |||||||||||||||||||||||| Sbjct: 8553868 gcgtgatgctgataatggttatga 8553845
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 186 bits (94), Expect = 1e-43 Identities = 142/158 (89%) Strand = Plus / Minus Query: 418 cgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggcccaatatcac 477 ||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 24043 cgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggcccaatatcat 23984 Query: 478 atgaatcgccaggtattttttggccgtgagataactgttgtgcttgctgctgagtcacgg 537 |||||||| ||||| |||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 23983 atgaatcgtcaggtggtttttggccgggagataactgttgttcttgctgctgagtcacgg 23924 Query: 538 aagaggccagaggatatgcgcactagaactagagtcag 575 || |||||||| || ||||||| |||| | |||||||| Sbjct: 23923 aaaaggccagaagagatgcgcagtagagccagagtcag 23886 Score = 149 bits (75), Expect = 3e-32 Identities = 104/113 (92%), Gaps = 3/113 (2%) Strand = Plus / Minus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 25581 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagg---gga 25525 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatccc 320 ||||||||||| ||||| ||||||||||| |||||| |||||||||||||||| Sbjct: 25524 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccc 25472 Score = 85.7 bits (43), Expect = 4e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 330 cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 389 ||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||||| Sbjct: 25102 cagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttacct 25043 Query: 390 tccgaaggattatta 404 || ||||||||||| Sbjct: 25042 gccaaaggattatta 25028 Score = 67.9 bits (34), Expect = 8e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 917 ccaggccatcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctcccg 976 |||||| ||||||||| ||||| || ||||||||||||||||| |||||| ||||| | Sbjct: 22696 ccaggcaatcctcaggatcgcctccaggatcccgctccaggtctgccgacgggtctcctg 22637 Query: 977 cccgcagcgactaa 990 ||||||| |||||| Sbjct: 22636 cccgcagtgactaa 22623 Score = 67.9 bits (34), Expect = 8e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 684 aaggtcatactctcctgctccaagacggcgggatgactactctgcttccccacggggaag 743 ||||||||||||||||||||||||||| || |||||||| || || ||||||| | ||| Sbjct: 23350 aaggtcatactctcctgctccaagacgacgagatgactattccgcatccccacagagaaa 23291 Query: 744 ggagtctcatcgctcgaaatctcctgtgcgtcatccgaaagaacatgaag 793 || | ||||| | ||||||||| |||||| || ||||||||||||| Sbjct: 23290 agacacacatcgtgcaaaatctcctaggcgtcagccaaaagaacatgaag 23241 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| ||||| ||||||||||||||||||||||| Sbjct: 25583 atcgcagtccaccaaggaggggatatggtggcag 25550 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Minus Query: 840 gcgtgatgctgataatggttatga 863 |||||||||||||||||||||||| Sbjct: 23191 gcgtgatgctgataatggttatga 23168
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1113_G05 Length = 131445 Score = 186 bits (94), Expect = 1e-43 Identities = 142/158 (89%) Strand = Plus / Minus Query: 418 cgagggtttgcgtttgtggagtttgttgacccttatgacgcctctgaggcccaatatcac 477 ||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 103990 cgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggcccaatatcat 103931 Query: 478 atgaatcgccaggtattttttggccgtgagataactgttgtgcttgctgctgagtcacgg 537 |||||||| ||||| |||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 103930 atgaatcgtcaggtggtttttggccgggagataactgttgttcttgctgctgagtcacgg 103871 Query: 538 aagaggccagaggatatgcgcactagaactagagtcag 575 || |||||||| || ||||||| |||| | |||||||| Sbjct: 103870 aaaaggccagaagagatgcgcagtagagccagagtcag 103833 Score = 149 bits (75), Expect = 3e-32 Identities = 104/113 (92%), Gaps = 3/113 (2%) Strand = Plus / Minus Query: 208 cgcagccccccaaggaggggatatggtggcagaggaagaagtccccctaggaggggtgga 267 ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105528 cgcagtccaccaaggaggggatatggtggcagaggaagaagtccccctaggagg---gga 105472 Query: 268 tatggaggacgaaaggagcagggttctggaagtctcttggtccgcaacatccc 320 ||||||||||| ||||| ||||||||||| |||||| |||||||||||||||| Sbjct: 105471 tatggaggacggaaggaacagggttctggcagtctcctggtccgcaacatccc 105419 Score = 85.7 bits (43), Expect = 4e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 330 cagagcggaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttacct 389 ||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||||| Sbjct: 105049 cagagcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttacct 104990 Query: 390 tccgaaggattatta 404 || ||||||||||| Sbjct: 104989 gccaaaggattatta 104975 Score = 67.9 bits (34), Expect = 8e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 917 ccaggccatcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctcccg 976 |||||| ||||||||| ||||| || ||||||||||||||||| |||||| ||||| | Sbjct: 102643 ccaggcaatcctcaggatcgcctccaggatcccgctccaggtctgccgacgggtctcctg 102584 Query: 977 cccgcagcgactaa 990 ||||||| |||||| Sbjct: 102583 cccgcagtgactaa 102570 Score = 67.9 bits (34), Expect = 8e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 684 aaggtcatactctcctgctccaagacggcgggatgactactctgcttccccacggggaag 743 ||||||||||||||||||||||||||| || |||||||| || || ||||||| | ||| Sbjct: 103297 aaggtcatactctcctgctccaagacgacgagatgactattccgcatccccacagagaaa 103238 Query: 744 ggagtctcatcgctcgaaatctcctgtgcgtcatccgaaagaacatgaag 793 || | ||||| | ||||||||| |||||| || ||||||||||||| Sbjct: 103237 agacacacatcgtgcaaaatctcctaggcgtcagccaaaagaacatgaag 103188 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 164 atcgtagtcccccaaggaggggatatggtggcag 197 |||| ||||| ||||||||||||||||||||||| Sbjct: 105530 atcgcagtccaccaaggaggggatatggtggcag 105497 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Minus Query: 840 gcgtgatgctgataatggttatga 863 |||||||||||||||||||||||| Sbjct: 103138 gcgtgatgctgataatggttatga 103115
>dbj|AK241625.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065187E21, full insert sequence Length = 678 Score = 137 bits (69), Expect = 1e-28 Identities = 247/308 (80%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 684 aaggtcatactctcctgctccaagacggcgggatgactactctgcttccccacggggaag 743 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||| Sbjct: 24 aaggtcatactctcctgctccaagacggcgagatgactactcagcttccccaccgagaaa 83 Query: 744 ggagtctcatcgctcgaaatctcctgtgcgtcatccgaaagaac---atgaagaggacaa 800 ||| | || | | | ||||||||| |||||| || ||||||| |||||||| | || Sbjct: 84 ggatacgcaccccacaaaatctcctaggcgtcagccaaaagaacatgatgaagagaagaa 143 Query: 801 aaggagatcctactnnnnnnntggtagagatggcggccagcgtgatgctgataatggtta 860 |||||||||||| |||||||||||| || || ||||||||||| ||||| Sbjct: 144 gcggagatcctactctcctgccagtagagatggcgaccctcgcgatgctgataacggtta 203 Query: 861 tgagaagaggtcgccactggctgacagtgatggatccccttcactgcagagggtggccag 920 ||||||||||||||| | ||||||| |||||||||||| ||| | |||| | || Sbjct: 204 tgagaagaggtcgcccccacctgacagcgatggatcccctccacaccggaggtctcctag 263 Query: 921 gccatcctcagggtcgccccctggatcccgctccaggtcccccgacgcttctcccgcccg 980 || |||||||||||||| || ||||||||||| |||||| |||| | ||| || ||||| Sbjct: 264 gcactcctcagggtcgcctccaggatcccgctctaggtccgccgatgtttcccctgcccg 323 Query: 981 cagcgact 988 |||||||| Sbjct: 324 cagcgact 331
>gb|DQ244954.1| Zea mays clone 11892 mRNA sequence Length = 1240 Score = 129 bits (65), Expect = 3e-26 Identities = 182/221 (82%) Strand = Plus / Plus Query: 337 gaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttaccttccgaag 396 ||||| || ||||| ||||| ||| |||| || |||||| ||||||||||||| || | Sbjct: 250 gaggaactacgtgtccctttcgaacggttcggccctgttcgggatgtttacctgccaaga 309 Query: 397 gattattacagcggggagccacgagggtttgcgtttgtggagtttgttgacccttatgac 456 |||||| ||| ||||||||| |||| |||| ||| |||||||| ||||| |||||||| Sbjct: 310 gattatcacactggggagccaagaggatttgggttcgtggagttcgttgatgcttatgac 369 Query: 457 gcctctgaggcccaatatcacatgaatcgccaggtattttttggccgtgagataactgtt 516 || |||||||| || || ||||||||||||||| | ||| ||| ||||| ||||||||| Sbjct: 370 gcttctgaggcacagtaccacatgaatcgccagatgtttgctgggcgtgaaataactgtt 429 Query: 517 gtgcttgctgctgagtcacggaagaggccagaggatatgcg 557 || |||||||| || ||||||| ||||| ||||| ||||| Sbjct: 430 gtacttgctgcggatacacggaaaaggcctgaggacatgcg 470 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 687 gtcatactctcctgctccaagacggcgggatgactactctgcttccccac 736 ||||||||| ||||| || | | |||| |||||||||||||||||||||| Sbjct: 603 gtcatactcccctgccccgaaaaggcgtgatgactactctgcttccccac 652
>gb|AY109715.1| Zea mays CL333_1 mRNA sequence Length = 1192 Score = 129 bits (65), Expect = 3e-26 Identities = 182/221 (82%) Strand = Plus / Plus Query: 337 gaggatctccgtgttccttttgaaaggtttggtcctgttagggatgtttaccttccgaag 396 ||||| || ||||| ||||| ||| |||| || |||||| ||||||||||||| || | Sbjct: 230 gaggaactacgtgtccctttcgaacggttcggccctgttcgggatgtttacctgccaaga 289 Query: 397 gattattacagcggggagccacgagggtttgcgtttgtggagtttgttgacccttatgac 456 |||||| ||| ||||||||| |||| |||| ||| |||||||| ||||| |||||||| Sbjct: 290 gattatcacactggggagccaagaggatttgggttcgtggagttcgttgatgcttatgac 349 Query: 457 gcctctgaggcccaatatcacatgaatcgccaggtattttttggccgtgagataactgtt 516 || |||||||| || || ||||||||||||||| | ||| ||| ||||| ||||||||| Sbjct: 350 gcttctgaggcacagtaccacatgaatcgccagatgtttgctgggcgtgaaataactgtt 409 Query: 517 gtgcttgctgctgagtcacggaagaggccagaggatatgcg 557 || |||||||| || ||||||| ||||| ||||| ||||| Sbjct: 410 gtacttgctgcggatacacggaaaaggcctgaggacatgcg 450 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 687 gtcatactctcctgctccaagacggcgggatgactactctgcttccccac 736 ||||||||| ||||| || | | |||| |||||||||||||||||||||| Sbjct: 583 gtcatactcccctgccccgaaaaggcgtgatgactactctgcttccccac 632
>ref|NM_001075078.1| Oryza sativa (japonica cultivar-group) Os11g0704700 (Os11g0704700) mRNA, complete cds Length = 1766 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 349 gttccttttgaaaggtttggtcctgttagggatgtttaccttccgaaggattattacagc 408 ||||| ||| ||| ||||||||||||| |||||||||| || || || || || ||| Sbjct: 256 gttccatttcaaaagtttggtcctgttcgggatgtttatctgccaaaagactacaacact 315 Query: 409 ggggagccacgagggtttgcgtttgtggagtttg 442 ||||||||| |||| ||||| ||||||||||||| Sbjct: 316 ggggagccaagaggatttgcatttgtggagtttg 349
>dbj|AK102518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095N01, full insert sequence Length = 1767 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 349 gttccttttgaaaggtttggtcctgttagggatgtttaccttccgaaggattattacagc 408 ||||| ||| ||| ||||||||||||| |||||||||| || || || || || ||| Sbjct: 257 gttccatttcaaaagtttggtcctgttcgggatgtttatctgccaaaagactacaacact 316 Query: 409 ggggagccacgagggtttgcgtttgtggagtttg 442 ||||||||| |||| ||||| ||||||||||||| Sbjct: 317 ggggagccaagaggatttgcatttgtggagtttg 350
>ref|NM_115404.1| Arabidopsis thaliana SCL30; RNA binding / nucleic acid binding (SCL30) mRNA, complete cds Length = 1101 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 421 gggtttgcgtttgtggagtttgttga 446 |||||||||||||||||||||||||| Sbjct: 347 gggtttgcgtttgtggagtttgttga 372 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 682 tcaaggtcatactctcctgctccaagacg 710 |||||||| ||||||||||| |||||||| Sbjct: 614 tcaaggtcttactctcctgcaccaagacg 642
>gb|AY128836.1| Arabidopsis thaliana putative RNA binding protein (At3g55460) mRNA, complete cds Length = 848 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 421 gggtttgcgtttgtggagtttgttga 446 |||||||||||||||||||||||||| Sbjct: 265 gggtttgcgtttgtggagtttgttga 290 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 682 tcaaggtcatactctcctgctccaagacg 710 |||||||| ||||||||||| |||||||| Sbjct: 532 tcaaggtcttactctcctgcaccaagacg 560
>gb|AY099649.1| Arabidopsis thaliana putative RNA binding protein (At3g55460) mRNA, complete cds Length = 1038 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 421 gggtttgcgtttgtggagtttgttga 446 |||||||||||||||||||||||||| Sbjct: 316 gggtttgcgtttgtggagtttgttga 341 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 682 tcaaggtcatactctcctgctccaagacg 710 |||||||| ||||||||||| |||||||| Sbjct: 583 tcaaggtcttactctcctgcaccaagacg 611
>gb|AY086131.1| Arabidopsis thaliana clone 21694 mRNA, complete sequence Length = 1100 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 421 gggtttgcgtttgtggagtttgttga 446 |||||||||||||||||||||||||| Sbjct: 347 gggtttgcgtttgtggagtttgttga 372 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 682 tcaaggtcatactctcctgctccaagacg 710 |||||||| ||||||||||| |||||||| Sbjct: 614 tcaaggtcttactctcctgcaccaagacg 642
>emb|AJ293798.1|ATH293798 Arabidopsis thaliana mRNA for SC35-like splicing factor SCL30, 30 kD Length = 1044 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 421 gggtttgcgtttgtggagtttgttga 446 |||||||||||||||||||||||||| Sbjct: 294 gggtttgcgtttgtggagtttgttga 319 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 682 tcaaggtcatactctcctgctccaagacg 710 |||||||| ||||||||||| |||||||| Sbjct: 561 tcaaggtcttactctcctgcaccaagacg 589
>emb|BX824297.1|CNS0A5MO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 997 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 421 gggtttgcgtttgtggagtttgttga 446 |||||||||||||||||||||||||| Sbjct: 303 gggtttgcgtttgtggagtttgttga 328 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 682 tcaaggtcatactctcctgctccaagacg 710 |||||||| ||||||||||| |||||||| Sbjct: 570 tcaaggtcttactctcctgcaccaagacg 598
>emb|BX823425.1|CNS0A5EO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1533 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 421 gggtttgcgtttgtggagtttgttga 446 |||||||||||||||||||||||||| Sbjct: 753 gggtttgcgtttgtggagtttgttga 778 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 682 tcaaggtcatactctcctgctccaagacg 710 |||||||| ||||||||||| |||||||| Sbjct: 1022 tcaaggtcttactctcctgcaccaagacg 1050
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16 Length = 103240 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 421 gggtttgcgtttgtggagtttgttga 446 |||||||||||||||||||||||||| Sbjct: 44962 gggtttgcgtttgtggagtttgttga 44987
>ref|XM_425652.2| PREDICTED: Gallus gallus similar to high affinity choline transporter (LOC428094), mRNA Length = 1635 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 882 tgacagtgatggatccccttca 903 |||||||||||||||||||||| Sbjct: 335 tgacagtgatggatccccttca 356
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Minus Query: 349 gttccttttgaaaggtttggtcctgttagggatgttta 386 ||||| ||| ||| ||||||||||||| |||||||||| Sbjct: 26389 gttccatttcaaaagtttggtcctgttcgggatgttta 26352 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 410 gggagccacgagggtttgcgtttgtggagtttg 442 |||||||| |||| ||||| ||||||||||||| Sbjct: 25455 gggagccaagaggatttgcatttgtggagtttg 25423
>ref|XM_657747.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5235.2), mRNA Length = 1410 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1113 ctgcttgttgctgttggaacct 1134 |||||||||||||||||||||| Sbjct: 523 ctgcttgttgctgttggaacct 544
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Minus Query: 349 gttccttttgaaaggtttggtcctgttagggatgttta 386 ||||| ||| ||| ||||||||||||| |||||||||| Sbjct: 28221288 gttccatttcaaaagtttggtcctgttcgggatgttta 28221251 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 410 gggagccacgagggtttgcgtttgtggagtttg 442 |||||||| |||| ||||| ||||||||||||| Sbjct: 28220354 gggagccaagaggatttgcatttgtggagtttg 28220322
>emb|CR380948.1| Candida glabrata strain CBS138 chromosome B complete sequence Length = 502101 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 419 gagggtttgcgtttgtggagtttgtt 444 |||| ||||||||||||||||||||| Sbjct: 404966 gaggttttgcgtttgtggagtttgtt 404941
>ref|XM_445151.1| Candida glabrata CBS138, CAGL0B04169g partial mRNA Length = 2586 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 419 gagggtttgcgtttgtggagtttgtt 444 |||| ||||||||||||||||||||| Sbjct: 2333 gaggttttgcgtttgtggagtttgtt 2358
>emb|AL645602.14| Mouse DNA sequence from clone RP23-79E13 on chromosome 11, complete sequence Length = 240483 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1162 atatctatgtaccatgtgtatg 1183 |||||||||||||||||||||| Sbjct: 87260 atatctatgtaccatgtgtatg 87239
>dbj|AK241443.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065162K24, full insert sequence Length = 1846 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 gtgatgctgataatggttatg 862 ||||||||||||||||||||| Sbjct: 506 gtgatgctgataatggttatg 526
>ref|NM_001059781.1| Oryza sativa (japonica cultivar-group) Os04g0504600 (Os04g0504600) mRNA, complete cds Length = 1512 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 gtgatgctgataatggttatg 862 ||||||||||||||||||||| Sbjct: 476 gtgatgctgataatggttatg 496
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 tggcagccccccgcaccgcagcccc 216 |||||||||||||| |||||||||| Sbjct: 2789688 tggcagccccccgccccgcagcccc 2789664
>ref|XM_979697.1| PREDICTED: Mus musculus similar to hemicentin 1 (LOC545414), mRNA Length = 10137 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 880 gctgacagtgatggatccccttcac 904 |||||||||||||||||||| |||| Sbjct: 7326 gctgacagtgatggatccccctcac 7350
>ref|XM_978791.1| PREDICTED: Mus musculus similar to hemicentin 1 (LOC665700), mRNA Length = 9609 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 880 gctgacagtgatggatccccttcac 904 |||||||||||||||||||| |||| Sbjct: 6798 gctgacagtgatggatccccctcac 6822
>ref|XM_914896.2| PREDICTED: Mus musculus similar to hemicentin 1 (LOC638763), mRNA Length = 8253 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 880 gctgacagtgatggatccccttcac 904 |||||||||||||||||||| |||| Sbjct: 5265 gctgacagtgatggatccccctcac 5289
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 410 gggagccacgagggtttgcgtttgtggagtttg 442 |||||||| |||| ||||| ||||||||||||| Sbjct: 178890 gggagccaagaggatttgcatttgtggagtttg 178858
>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland Research Institute) complete sequence Length = 256354 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1129 gaaccttaaggactgtagcat 1149 ||||||||||||||||||||| Sbjct: 67773 gaaccttaaggactgtagcat 67793
>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland Research Institute) complete sequence Length = 237247 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1129 gaaccttaaggactgtagcat 1149 ||||||||||||||||||||| Sbjct: 45993 gaaccttaaggactgtagcat 45973
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 gtgatgctgataatggttatg 862 ||||||||||||||||||||| Sbjct: 25164057 gtgatgctgataatggttatg 25164077
>gb|AC095015.1| Drosophila melanogaster, chromosome 3R, region 84A-84B, BAC clone BACR32J03, complete sequence Length = 190642 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 tggcagccccccgcaccgcagcccc 216 |||||||||||||| |||||||||| Sbjct: 130928 tggcagccccccgccccgcagcccc 130904
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 gtgatgctgataatggttatg 862 ||||||||||||||||||||| Sbjct: 45724 gtgatgctgataatggttatg 45744
>gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT-C),complete sequence Length = 429825 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 tggcagccccccgcaccgcagcccc 216 |||||||||||||| |||||||||| Sbjct: 92866 tggcagccccccgccccgcagcccc 92890
>gb|AY190949.1| Drosophila pseudoobscura clone DPSF01_8_J08 (D1424) genomic sequence Length = 42117 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1212 tttatttggagaaaagccttt 1232 ||||||||||||||||||||| Sbjct: 19742 tttatttggagaaaagccttt 19722
>gb|AC109199.10| Mus musculus chromosome 1, clone RP23-29D20, complete sequence Length = 194339 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1163 tatctatgtaccatgtgtatg 1183 ||||||||||||||||||||| Sbjct: 177694 tatctatgtaccatgtgtatg 177714
>gb|AC146752.24| Medicago truncatula clone mth2-62d4, complete sequence Length = 130134 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 gtgatgctgataatggttatg 862 ||||||||||||||||||||| Sbjct: 52446 gtgatgctgataatggttatg 52466
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 gtgatgctgataatggttatg 862 ||||||||||||||||||||| Sbjct: 111484 gtgatgctgataatggttatg 111504
>gb|AC002513.1|AC002513 Drosophila melanogaster (P1 DS08322 (D15)) DNA sequence, complete sequence Length = 79150 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 tggcagccccccgcaccgcagcccc 216 |||||||||||||| |||||||||| Sbjct: 22897 tggcagccccccgccccgcagcccc 22921 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 191,524,754 Number of extensions: 9973190 Number of successful extensions: 182119 Number of sequences better than 10.0: 54 Number of HSP's gapped: 182084 Number of HSP's successfully gapped: 169 Length of query: 1261 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1238 Effective length of database: 18,503,978,556 Effective search space: 22907925452328 Effective search space used: 22907925452328 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
