ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74i06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os02g56830:12002.t05255:unspliced-genomic transposon pro... 37 0.86
2LOC_Os07g06980:12007.t00577:unspliced-genomic histone deacet... 29 2.0
3LOC_Os10g14230:12010.t01143:unspliced-genomic transposon pro... 35 3.0
4LOC_Os02g35140:12002.t03152:unspliced-genomic auxin response... 35 3.0
5LOC_Os01g71660:12001.t06459:unspliced-genomic retrotransposo... 35 3.0
6LOC_Os09g39160:12009.t03382:unspliced-genomic thiol protease... 33 3.3
7LOC_Os12g16670:12012.t01520:unspliced-genomic expressed protein 35 4.2
8LOC_Os12g07260:12012.t00610:unspliced-genomic DNA-binding pr... 34 5.7
9LOC_Os01g17320:12001.t01578:unspliced-genomic DNA-binding pr... 34 5.7
10LOC_Os12g10340:12012.t00911:unspliced-genomic rust resistanc... 34 5.8
11LOC_Os11g30410:12011.t02645:unspliced-genomic ubiquitin-like... 34 5.8
12LOC_Os10g32348:12010.t02548:unspliced-genomic psbP family pr... 34 5.8
13LOC_Os10g32300:12010.t02546:unspliced-genomic TPR Domain con... 34 5.8
14LOC_Os07g14850:12007.t01348:unspliced-genomic CESA6 - cellul... 34 5.8
15LOC_Os09g27670:12009.t02445:unspliced-genomic hypothetical p... 34 7.9
16LOC_Os09g24730:12009.t02154:unspliced-genomic hypothetical p... 34 7.9
17LOC_Os06g37070:12006.t03402:unspliced-genomic expressed protein 34 7.9
18LOC_Os04g33480:12004.t005542:unspliced-genomic histone deace... 34 7.9
19LOC_Os01g43774:12001.t03892:unspliced-genomic cytochrome P45... 34 7.9

>LOC_Os02g56830:12002.t05255:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 2831
 Score = 36.8 bits (74), Expect = 0.86
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +2 / +2

                                                   
Query: 2555 PIRIYMPDHMKGFCYVVYHVIKVELGYVFLQLCGRAHDG 2671
            PI  ++P H+  + YVV H  K+  G+  LQ C  A DG
Sbjct: 497  PISRFLPKHLYPY*YVVLHF*KIICGFFLLQNCLGAIDG 613



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>LOC_Os07g06980:12007.t00577:unspliced-genomic histone deacetylase HDA110 isoform 1, putative, expressed|
          Length = 8859

 Score = 29.5 bits (58), Expect(2) = 2.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3 / +2

                                     
Query: 876  LCCVLCYKGRAGICISSTVWTCSWW 950
            +CC  C +     C   ++W CS W
Sbjct: 3548 MCCQTCSRDMC*SC*LDSIWACSQW 3622



 Score = 23.1 bits (44), Expect(2) = 2.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3 / +1

                          
Query: 741  VKFCSFCFSYRSCM 782
            V +C+ CFS  +CM
Sbjct: 3379 VLYCTVCFSIINCM 3420



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>LOC_Os10g14230:12010.t01143:unspliced-genomic transposon protein, putative, unclassified|
          Length = 2386

 Score = 35.0 bits (70), Expect = 3.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2 / -1

                                            
Query: 834 PRKPSTNFLYLLLTLTKSCRNGMKSKNCRILLS 736
           P+   + F +LLL  + +C+NG K +NC  LLS
Sbjct: 283 PKALRSLFHHLLLPFSHTCQNGSKPRNCTSLLS 185



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>LOC_Os02g35140:12002.t03152:unspliced-genomic auxin response factor 1, putative, expressed|
          Length = 6036

 Score = 35.0 bits (70), Expect = 3.0
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = -1 / -2

                                                
Query: 2422 RDKALCIQNNTESP*IEQTKPNHNLQSLSPIMSNIS 2315
            R+KAL + NN ESP I      HN  SLSP  +N S
Sbjct: 644  REKALFMVNNAESPRIPTNSTPHNNPSLSPP*TNKS 537



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>LOC_Os01g71660:12001.t06459:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2254

 Score = 35.0 bits (70), Expect = 3.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2 / -2

                                                    
Query: 837  RPRKPSTNFLYLLLTLTKSCRNGMKSKNCRILLSTVHKPL 718
            RP +P+ +FL  +  + +   N   SKN  +LL+  HKPL
Sbjct: 1323 RPCRPAKSFLSFMKLVNQDFVNEKTSKNIHLLLADRHKPL 1204



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>LOC_Os09g39160:12009.t03382:unspliced-genomic thiol protease SEN102 precursor, putative, expressed|
          Length = 2139

 Score = 33.1 bits (66), Expect(2) = 3.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3 / +2

                                           
Query: 1521 SHLISVNYDFILFMGVGYICI*LDLLRFYIV 1613
            S LI  +Y+F+++ GVGY  + L     YI+
Sbjct: 1157 SVLIEASYEFMIYQGVGYTAVCLQYFSLYIL 1249



 Score = 24.9 bits (48), Expect(2) = 3.3
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1 / +1

                                             
Query: 514 TVEQFVCFHLCLLRWIGLCRLVGLVDSLEMFDMI 615
           T+ Q    +LC+  +IG C    +V+++E  + I
Sbjct: 652 TIIQIHTCYLCIYTYIGSCWAFSVVEAVEGINAI 753



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>LOC_Os12g16670:12012.t01520:unspliced-genomic expressed protein|
          Length = 1625

 Score = 34.5 bits (69), Expect = 4.2
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = -3 / +1

                                                                  
Query: 170  LGINGGQNARLEYSQTKNSETRSARSEPITPLAITYLRLTRREGEEKRSEVKSS 9
            L +   Q A+   S T+ S  RS RS   TPLA +      +  EEKR E K +
Sbjct: 1315 LSVRRLQRAKCSCSTTQESFGRSTRSTTFTPLAKSGTHGEEKRKEEKRREGKKA 1476



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>LOC_Os12g07260:12012.t00610:unspliced-genomic DNA-binding protein, putative, expressed|
          Length = 5018

 Score = 34.1 bits (68), Expect = 5.7
 Identities = 10/17 (58%), Positives = 16/17 (94%)
 Frame = +3 / -2

                             
Query: 1011 FVCVLDVTFLGSTLKEH 1061
            F+C++DV+FLG T+K+H
Sbjct: 4486 FLCIMDVSFLGITIKQH 4436



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>LOC_Os01g17320:12001.t01578:unspliced-genomic DNA-binding protein, putative, expressed|
          Length = 4338

 Score = 34.1 bits (68), Expect = 5.7
 Identities = 10/17 (58%), Positives = 16/17 (94%)
 Frame = +3 / -3

                             
Query: 1011 FVCVLDVTFLGSTLKEH 1061
            F+C++DV+FLG T+K+H
Sbjct: 3874 FLCIMDVSFLGITIKQH 3824



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>LOC_Os12g10340:12012.t00911:unspliced-genomic rust resistance-like protein RP1-3, putative, expressed|
          Length = 2111

 Score = 34.1 bits (68), Expect = 5.8
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1 / -1

                              
Query: 2557 YPDIHARPYERILLCCVP 2610
            YPD+HA+ Y +I L CVP
Sbjct: 1301 YPDVHAKMYSKIELSCVP 1248



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>LOC_Os11g30410:12011.t02645:unspliced-genomic ubiquitin-like 1-activating enzyme E1A, putative, expressed|
          Length = 6316

 Score = 34.1 bits (68), Expect = 5.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2 / -1

                                    
Query: 171 PRHQRRTERSPGIQSNEEQRNKERE 97
           P H+RR + +PG+   E +R +ERE
Sbjct: 346 PPHKRRAKENPGLLGEERERERERE 272



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>LOC_Os10g32348:12010.t02548:unspliced-genomic psbP family protein, expressed|
          Length = 15197

 Score = 34.1 bits (68), Expect = 5.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2 / -2

                                       
Query: 1875 KNSMCHAYNLNQLRGES*QYVPCLIST 1795
            KNS+ H  N+  L+ E   YV CLIST
Sbjct: 1864 KNSIIHVLNIINLKNEDCLYVQCLIST 1784



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>LOC_Os10g32300:12010.t02546:unspliced-genomic TPR Domain containing protein, expressed|
          Length = 6086

 Score = 34.1 bits (68), Expect = 5.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2 / -1

                                       
Query: 1875 KNSMCHAYNLNQLRGES*QYVPCLIST 1795
            KNS+ H  N+  L+ E   YV CLIST
Sbjct: 1850 KNSIIHVLNIINLKNEDCLYVQCLIST 1770



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>LOC_Os07g14850:12007.t01348:unspliced-genomic CESA6 - cellulose synthase, expressed|
          Length = 5718

 Score = 34.1 bits (68), Expect = 5.8
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -1 / -3

                                                                   
Query: 754  LQNFTVNCPQTAVFHRKKIKHFVRRTLLNHLEWNRQNETTTFNLSVRSCQTSPGN 590
            +Q F V+     + +    KH +   +L     N  ++ TTF L+ RSC++ P N
Sbjct: 3397 IQTFHVDLYNANIRNHNSNKHNIDHKVLVPERLNLTSKKTTFRLAYRSCRSIPSN 3233



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>LOC_Os09g27670:12009.t02445:unspliced-genomic hypothetical protein|
          Length = 1084

 Score = 33.6 bits (67), Expect = 7.9
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3 / -2

                                 
Query: 63  VCYGQWGNRFRSRAPCFAVLRL 128
           VC+G WG R R R PC A  RL
Sbjct: 849 VCHGCWGRRARWRGPCPASARL 784



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>LOC_Os09g24730:12009.t02154:unspliced-genomic hypothetical protein|
          Length = 1933

 Score = 33.6 bits (67), Expect = 7.9
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2 / +3

                                       
Query: 180 GTRPRHQRRTERSPGIQSNEEQRNKERE 97
           G+  R QR  E +PG Q+ E +R +ERE
Sbjct: 594 GSHTREQRGGENAPGGQTRERERERERE 677



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>LOC_Os06g37070:12006.t03402:unspliced-genomic expressed protein|
          Length = 2440

 Score = 33.6 bits (67), Expect = 7.9
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2 / +1

                              
Query: 2585 KGFCYVVYHVIKVELGYV 2638
            K FC V+Y ++KV LGYV
Sbjct: 2104 KAFCCVIYSIVKVHLGYV 2157



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>LOC_Os04g33480:12004.t005542:unspliced-genomic histone deacetylase 1, putative, expressed|
          Length = 5736

 Score = 33.6 bits (67), Expect = 7.9
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2 / +1

                                                     
Query: 665  VIQ*CSAYKVLYLFAVKNSGLWTVDSKILQFLLFIPFLHDL 787
            +++*CS  K+L +F V    +W V    L  +L +PF H++
Sbjct: 2734 ILR*CSTNKLLNIFYVLFGMMWLVIGPSLHSVLSLPFSHEV 2856



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>LOC_Os01g43774:12001.t03892:unspliced-genomic cytochrome P450 72A1, putative, expressed|
          Length = 4699

 Score = 33.6 bits (67), Expect = 7.9
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1 / +1

                                                  
Query: 730 PQTAVFHRKKIKHFVRRTLLNHLEWNRQNETTTFNLSVR 614
           P    +++  IKH +RRT++N LE      T   NL+VR
Sbjct: 682 PNLQHYYKNPIKH*IRRTIINELEEQLLFGTARGNLNVR 798


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 1,147,475,116
Number of extensions: 17625618
Number of successful extensions: 51120
Number of sequences better than 10.0: 19
Length of query: 1031
Length of database: 55,613,886
Length adjustment: 53
Effective length of query: 978
Effective length of database: 52,631,152
Effective search space: 51473266656
Effective search space used: 51473266656
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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