ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf74h17 |
|---|---|
| Clone Library Name | barley_pub |
>P49901:MCSP_HUMAN Sperm mitochondrial-associated cysteine-rich protein - Homo sapiens| (Human) Length = 116 Score = 38.9 bits (89), Expect = 0.068 Identities = 17/58 (29%), Positives = 26/58 (44%) Frame = +2 Query: 143 CSTAGLRECVHPRDGGSCSTAGLRECVHPRDGGSCSTDGLRECLHPRDSGSCPPRPPC 316 C A +C P+ C + G +C P+ C G +C P+ + C P+PPC Sbjct: 10 CCPAKGNQCCPPQQNQCCQSKG-NQCCPPKQNQCCQPKG-SQCCPPKHNHCCQPKPPC 65
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 36.6 bits (83), Expect = 0.34 Identities = 38/104 (36%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Frame = -3 Query: 411 EKSGRCTR*HRSCRLDPSAATSQ*GSRISARWHGGRGGQEPLSRGWRHSR--RPSVEQEP 238 E S R R HRS R A G H R E SRG+R+ R R + E P Sbjct: 250 EHSSRGYRNHRSSRETRDYAPPSRGHAYRDYGHSRR--DESYSRGYRNRRSSRETREYAP 307 Query: 237 PSRG-----WTHSRRPAVEQEPPSRGWTH--SRRPAVEQEPPSR 127 PSRG + HSRR E SRG+ + S R + PP R Sbjct: 308 PSRGHGYRDYGHSRR----HESYSRGYRNHPSSRETRDYAPPHR 347
>Q6RI45:BRWD3_HUMAN Bromodomain and WD repeat domain-containing protein 3 - Homo sapiens| (Human) Length = 1802 Score = 36.6 bits (83), Expect = 0.34 Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Frame = -1 Query: 215 HGGQRWSRSRRPVGGRTHGGR--RWSRSRRPVG*GAWFGLGRHAPSSHFRDSGGGGAWRQ 42 HG + + R GGR GR RWSR R G G GR + R GGGG + Sbjct: 1658 HGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRG-----GRGRGS-----RGRGGGGTRGR 1707 Query: 41 GEPRGGGVRARG 6 G RGG +RG Sbjct: 1708 GRGRGGRGASRG 1719
>Q4ZHG4:FNDC1_HUMAN Fibronectin type III domain-containing protein 1 - Homo sapiens| (Human) Length = 1836 Score = 36.2 bits (82), Expect = 0.44 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = -3 Query: 333 RISARWHGGRGGQEPLSRGWRHSRRPSVEQEPPSRGWTHSRRPAVEQEPPSRGWTHSRRP 154 ++S+ HG ++PL + PS ++P SRGW RR P RG + R+ Sbjct: 818 KLSSGIHGDEEDEKPLPATVVNDHVPSSSRQPISRGWEDLRR------SPQRGASLHRKE 871 Query: 153 AVEQEPPSRG 124 + + P S G Sbjct: 872 PIPENPKSTG 881
>A2AHJ4:BRWD3_MOUSE Bromodomain and WD repeat domain-containing protein 3 - Mus musculus| (Mouse) Length = 1799 Score = 36.2 bits (82), Expect = 0.44 Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Frame = -1 Query: 218 THGGQRWSRSRRPVGGRTHGGR--RWSRSRRPVG*GAWFGLGRHAPSSHFRDSGGGGAWR 45 T+G + W R GGR GR RWSR R G G GR R GGGG Sbjct: 1656 TNGKRNWKT--RGTGGRGRWGRWGRWSRGGRGRG-----GRGRGG-----RGRGGGGGRG 1703 Query: 44 QGEPRGGGVRARG 6 +G RGG +RG Sbjct: 1704 RGRGRGGRGASRG 1716
>Q6Z4K6:RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B - Oryza sativa subsp.| japonica (Rice) Length = 638 Score = 35.4 bits (80), Expect = 0.76 Identities = 22/58 (37%), Positives = 27/58 (46%) Frame = -1 Query: 194 RSRRPVGGRTHGGRRWSRSRRPVG*GAWFGLGRHAPSSHFRDSGGGGAWRQGEPRGGG 21 R+RR GG GGR + R R G G + G G + GGGG + G GGG Sbjct: 573 RNRRSGGGARFGGRDFRRDRGSGG-GGYGGGGGGYGGGGYGGGGGGGGYGGGSSYGGG 629
>Q9DAE3:LELP1_MOUSE Late cornified envelope-like proline-rich protein 1 - Mus musculus| (Mouse) Length = 120 Score = 35.0 bits (79), Expect = 0.99 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 131 DGGSCSTAGLRECVHPRDGGSCSTAGLRECVHP---RDGGSCSTDGLRECLHPRDSGSCP 301 D S S GL+ C PR C T C++ R CS D +C + CP Sbjct: 4 DKSSDSKNGLKNC-DPRCEQKCETKCQPSCLNKLLQRCSEKCSLD---KCPPSPNCPPCP 59 Query: 302 PRPPCHL 322 P PPCHL Sbjct: 60 PCPPCHL 66
>Q5RB22:ERBB3_PONPY Receptor tyrosine-protein kinase erbB-3 precursor - Pongo pygmaeus| (Orangutan) Length = 1342 Score = 34.7 bits (78), Expect = 1.3 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 10/69 (14%) Frame = +2 Query: 137 GSCSTAGLREC-------VHPRDGGSCSTAGLRECVHPRDGGSCSTDGLRECL---HPRD 286 G C +G +C P+ G C +C H G CS +C H D Sbjct: 192 GRCWGSGPEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFACRHFND 251 Query: 287 SGSCPPRPP 313 SG+C PR P Sbjct: 252 SGACVPRCP 260
>Q61526:ERBB3_MOUSE Receptor tyrosine-protein kinase erbB-3 precursor - Mus musculus| (Mouse) Length = 1339 Score = 34.7 bits (78), Expect = 1.3 Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 10/72 (13%) Frame = +2 Query: 137 GSCSTAGLREC-------VHPRDGGSCSTAGLRECVHPRDGGSCSTDGLRECL---HPRD 286 G C G +C P+ G C +C H G CS +C H D Sbjct: 192 GRCWGPGPEDCQILTKTICAPQCNGRCFGPNPNQCCHDECAGGCSGPQDTDCFACRHFND 251 Query: 287 SGSCPPRPPCHL 322 SG+C PR P L Sbjct: 252 SGACVPRCPAPL 263
>Q5A6Q7:EAF7_CANAL Chromatin modification-related protein EAF7 - Candida albicans| (Yeast) Length = 445 Score = 34.7 bits (78), Expect = 1.3 Identities = 48/240 (20%), Positives = 81/240 (33%), Gaps = 6/240 (2%) Frame = +3 Query: 648 SPEKSTEYSVEEFLCGSFANSLEHTLPGFDFRTSKESTGNADGPGLPNYVKPRVQEPFGN 827 +P++ ++Y+ EE G S D + T + GL + + Sbjct: 165 TPKEKSQYNDEEITSGGAEKSKVEVSSTSDHTDDQSPTPGSTKKGLDEQTNDDMSDIEDV 224 Query: 828 SGDYDNSMSNMAASEGLCN-----DRVGMPDESFEDPGPGDTCNGQASRADNSHEDTQTD 992 D + E ++ +E+ E+ GD +G + N +DT D Sbjct: 225 DKDKGDETIAKIKKENTSEQEEDKNKKQTEEEAEEEEEEGDHVSGDERESKN--KDTSED 282 Query: 993 ASGKRIVSHSVDSALVSNDIDKIEEEHGPSKLGNNSVCPGTEHVLEVLNKV-VSTEHGSV 1169 G+ D V D +E S+ +S P T+ + TEH S Sbjct: 283 EDGEDNEDQDEDDVEVIEDSHTDKENESSSE--ESSPEPMTKRTRQRTRSTHEKTEHTSP 340 Query: 1170 QCPKKLRSGKVYEMSDGASSKRGYSKRKAMQHEALSMKVIPNEETAPPAGPTSRKKGASV 1349 K+ R ++ S G KR+A P +PP P +R++ SV Sbjct: 341 NIKKRTRQSVKFDDKPAEPSDTGSRKRRA-----------PPGSVSPPHPPKTRRRTRSV 389
>P21860:ERBB3_HUMAN Receptor tyrosine-protein kinase erbB-3 precursor - Homo sapiens| (Human) Length = 1342 Score = 34.3 bits (77), Expect = 1.7 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Frame = +2 Query: 143 CSTAGLRECVHPRDGGSCSTAGLRECVHPRDGGSCSTDGLRECL---HPRDSGSCPPRPP 313 C T C P+ G C +C H G CS +C H DSG+C PR P Sbjct: 202 CQTLTKTICA-PQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFACRHFNDSGACVPRCP 260
>Q22037:ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 - Caenorhabditis elegans| Length = 346 Score = 33.9 bits (76), Expect = 2.2 Identities = 20/64 (31%), Positives = 27/64 (42%) Frame = -1 Query: 197 SRSRRPVGGRTHGGRRWSRSRRPVG*GAWFGLGRHAPSSHFRDSGGGGAWRQGEPRGGGV 18 +R R GGR+ G+R + G G W G + + GGGG G GGG Sbjct: 201 NRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGW 260 Query: 17 RARG 6 +G Sbjct: 261 GQQG 264
>Q9UUB3:MEU18_SCHPO Meiotic expression up-regulated protein 18 - Schizosaccharomyces| pombe (Fission yeast) Length = 553 Score = 33.9 bits (76), Expect = 2.2 Identities = 26/75 (34%), Positives = 35/75 (46%) Frame = +3 Query: 534 MDCNGFPSEVSNQFRLGFPIQWEKYVNSNMKQANEHTLSPEKSTEYSVEEFLCGSFANSL 713 +D NG + + F I EKYV+ N E SP+K T Y V+E L F + Sbjct: 375 LDQNG--TNYDDAFAAPEAISIEKYVSIN----EEDPKSPKKETSYQVQEKLSQFFQEEM 428 Query: 714 EHTLPGFDFRTSKES 758 H L + TS+ES Sbjct: 429 IHLLEMGEACTSRES 443
>Q6P0N0:CV106_HUMAN Uncharacterized potential DNA-binding protein C14orf106 - Homo| sapiens (Human) Length = 1132 Score = 33.9 bits (76), Expect = 2.2 Identities = 22/115 (19%), Positives = 51/115 (44%), Gaps = 3/115 (2%) Frame = +3 Query: 333 VTLIDWWLLRGQGGK--ICVTGYIDPIFRRKRSVRLFISSPITVRHAE-GTLETADHRFV 503 V + W+++ ICV G + + ++ S + + E L T Sbjct: 382 VVQLQEWMIKSINNNTAICVEGKLIDV------TNIYWHSNVIIERIEHNKLRTISGNVY 435 Query: 504 LTRGPLNIKKMDCNGFPSEVSNQFRLGFPIQWEKYVNSNMKQANEHTLSPEKSTE 668 + +G ++ M G+P+ + +F GFP W++++++ ++Q + EK+ + Sbjct: 436 ILKGMIDQISMKEAGYPNYLIRKFMFGFPENWKEHIDNFLEQLRAGEKNREKTKQ 490
>P50105:TAF4_YEAST Transcription initiation factor TFIID subunit 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 388 Score = 33.5 bits (75), Expect = 2.9 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 10/133 (7%) Frame = +3 Query: 702 ANSLEHTLPGFD--------FRTSKESTGNADGPGLPNYVKPRVQEPFGNSGDYDNSMSN 857 A+ L H+LP T ++ GN D LP V P ++GD +N S+ Sbjct: 40 ASELSHSLPSPSQIKSTAHVSSTHNDAAGNTDDSVLPKNVSPTTNLRVESNGDTNNMFSS 99 Query: 858 MAASEGLCNDRVGMPDESFEDPG--PGDTCNGQASRADNSHEDTQTDASGKRIVSHSVDS 1031 A GL + D+ ++ G D+ +G+AS + + Q+D + + Sbjct: 100 PA---GLA---LPKKDDKKKNKGTSKADSKDGKASNSSGQNAQQQSD-------PNKMQD 146 Query: 1032 ALVSNDIDKIEEE 1070 L S ID EEE Sbjct: 147 VLFSAGIDVREEE 159
>P84811:PWAP_HALLA Perlwapin - Haliotis laevigata (Abalone)| Length = 134 Score = 33.5 bits (75), Expect = 2.9 Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 9/64 (14%) Frame = +2 Query: 143 CSTAGLRECVHPRDGGSCSTAGLRECVH---------PRDGGSCSTDGLRECLHPRDSGS 295 C+T L CV G C C P + C G R C P GS Sbjct: 34 CNTGCLNICVPKPKPGLCPAIRPGPCKGNVCSNDQDCPGNQKCCGKPGCRRCYRPEKPGS 93 Query: 296 CPPR 307 CPPR Sbjct: 94 CPPR 97
>Q5DTT1:K2022_MOUSE Uncharacterized protein KIAA2022 - Mus musculus (Mouse)| Length = 1515 Score = 33.5 bits (75), Expect = 2.9 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +1 Query: 7 PRALTPPPLGSPCRQAPPPPESL 75 PR L PPP PC Q+PP P +L Sbjct: 61 PRGLLPPPSKKPCMQSPPSPLAL 83
>P61591:MCPH1_GORGO Microcephalin - Gorilla gorilla gorilla (Lowland gorilla)| Length = 835 Score = 33.1 bits (74), Expect = 3.8 Identities = 50/237 (21%), Positives = 85/237 (35%), Gaps = 14/237 (5%) Frame = +3 Query: 411 RRKRSVRLFISSPITVRHAEGTLETADHRFVLTRGPLNIKKMDCNGFPSEVSNQFRLGFP 590 +RKRS+R I + + +EG L+ GP +K + C + Sbjct: 372 KRKRSIRRSIMPRLQLCRSEGRLQHV-------AGPA-LKALSCGESSYD---------- 413 Query: 591 IQWEKYVNSNMKQANEHTLSPEKSTEYSVEEFLCGSFANSLEHTL-PGFDFRTSKESTGN 767 + + N+K+ N L PE S +F C S + ++ DF + T Sbjct: 414 ---DYFSPDNLKERNSENLPPESQLPSSPAQFSCRSLSKKERTSIFEMSDFSCVGKKTRT 470 Query: 768 ADGPGLPNYVKPRVQEP--FGN-SGDYDNSMSNMAASEGL-CNDRVGMPD---------E 908 D + N+ + P GN G +S A E L C + G D Sbjct: 471 VD---ITNFTAKTISSPQKTGNGEGRATSSCVTSAPEEALRCCRQAGKEDGCPEGNGFSY 527 Query: 909 SFEDPGPGDTCNGQASRADNSHEDTQTDASGKRIVSHSVDSALVSNDIDKIEEEHGP 1079 + EDP +G + + S E+ + K + S + ++ + + EH P Sbjct: 528 TIEDPALPKGHDGDLTALEGSLEEMKEAVGLKSTQNRGTTSKISNSSEGEAQSEHEP 584
>P98158:LRP2_RAT Low-density lipoprotein receptor-related protein 2 precursor - Rattus| norvegicus (Rat) Length = 4660 Score = 33.1 bits (74), Expect = 3.8 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 10/70 (14%) Frame = +2 Query: 155 GLRECVHPRDGGSC---STAGLRECVHPRDGGSCST-----DGLRECLHPRDSGSCPPRP 310 G ++C D C T+ +C DG SC DG+ +C D CP RP Sbjct: 1171 GDKDCADGSDEAGCVLNCTSAQFKCA---DGSSCINSRYRCDGVYDCRDNSDEAGCPTRP 1227 Query: 311 P--CHLAEMR 334 P CH E + Sbjct: 1228 PGMCHPDEFQ 1237
>Q6NYV9:LEO1_DANRE RNA polymerase-associated protein LEO1 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 696 Score = 33.1 bits (74), Expect = 3.8 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Frame = +3 Query: 807 VQEPFGNSGDYDNSMSNMAASEGLCNDRVGMPDESFEDPGPGDTCNG-QASRADNSHEDT 983 + E FG+ GD DN + + G D E P +G +++++D H+D Sbjct: 4 MDELFGSDGDSDNEQRDSGSGSG--------SDSDHERPRSASNASGSESAQSDRDHDDD 55 Query: 984 QTDASGKRIVSHSVDSALVSNDIDKIEEEHGPSKLGN 1094 + + GK + L +D E+EHG G+ Sbjct: 56 EDEDGGK-----PSNKELFGDD---SEDEHGSQHSGS 84
>Q28Z18:SETB1_DROPS Histone-lysine N-methyltransferase eggless - Drosophila pseudoobscura| (Fruit fly) Length = 1314 Score = 32.7 bits (73), Expect = 4.9 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Frame = +3 Query: 882 NDRVGMPDESFEDPGPGDTCNGQASRAD---NSHEDTQTDASGKRIVSHSVDSALVSNDI 1052 ND +P E E PGP + S D +S + D+S + I S + D +L Sbjct: 129 NDEELLPLEEKEKPGPAKELEPKESEPDSKESSKSEALADSSIELISSPTSDDSLAKEKE 188 Query: 1053 DKIEEEHG 1076 +++EEHG Sbjct: 189 VEVKEEHG 196
>Q6AYA1:NOLA1_RAT H/ACA ribonucleoprotein complex subunit 1 - Rattus norvegicus (Rat)| Length = 226 Score = 32.7 bits (73), Expect = 4.9 Identities = 27/69 (39%), Positives = 28/69 (40%) Frame = -1 Query: 212 GGQRWSRSRRPVGGRTHGGRRWSRSRRPVG*GAWFGLGRHAPSSHFRDSGGGGAWRQGEP 33 GG R R GGR GGR R G F GR GGGG +R G Sbjct: 178 GGGRGGRG----GGRGGGGRGGGR-------GGGFRGGR----------GGGGGFRGGRG 216 Query: 32 RGGGVRARG 6 GGG R RG Sbjct: 217 GGGGFRGRG 225
>Q9Z2E1:MBD2_MOUSE Methyl-CpG-binding domain protein 2 - Mus musculus (Mouse)| Length = 414 Score = 32.7 bits (73), Expect = 4.9 Identities = 29/73 (39%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = -1 Query: 212 GGQRWSRSRRPVGGRTHGGRRWSRSRRPVG*GAWFGLGRHAPSSH---FRDSGGGGAWRQ 42 G RW ++ R GG GR R R G G G GR P S GGGGA Sbjct: 60 GRGRWKQAARG-GGVCGRGRGRGRGR---GRGRGRGRGRGRPQSGGSGLGGDGGGGAGGC 115 Query: 41 GEPRGGGVRARGD 3 G GGGV R D Sbjct: 116 GVGSGGGVAPRRD 128
>Q7RX84:CWC22_NEUCR Pre-mRNA-splicing factor cwc-22 - Neurospora crassa| Length = 1010 Score = 32.7 bits (73), Expect = 4.9 Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Frame = -3 Query: 315 HGGRGGQEPLSRGWRHSRR----PSVEQEPPSRGWTHSRRPAVEQEPPSRGWTHSRRPAV 148 H + P R SRR PS Q P+R S P PP R HSR P + Sbjct: 78 HSHPRSRSPTPRSQSPSRRSVRSPSPRQGSPARRVDRSSSPRARSPPPRR---HSRSPPL 134 Query: 147 EQEPP 133 +PP Sbjct: 135 RGQPP 139
>P08266:RPB2_DROME DNA-directed RNA polymerase II subunit RPB2 - Drosophila melanogaster| (Fruit fly) Length = 1176 Score = 32.3 bits (72), Expect = 6.4 Identities = 41/163 (25%), Positives = 62/163 (38%), Gaps = 20/163 (12%) Frame = +3 Query: 882 NDRVGMPDESFEDPGPGDTCNGQASRADNSHEDTQTDASGKRIVSHSV-----------D 1028 N RVG +E+FE P G TC G + + +D A G R+ V D Sbjct: 821 NKRVGDQEENFEKPHRG-TCQGMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPEND 879 Query: 1029 SALVSNDIDKIEEEHGPSKLGNNSVCPGTEHVLEVLNKVVSTEHGSVQCPKKLRSGKVYE 1208 L SN K + S NS + V+ LN G C ++RS ++ + Sbjct: 880 DELDSN--TKRFSKRDASTFLRNSETGIVDQVMLTLN-----SEGYKFCKIRVRSVRIPQ 932 Query: 1209 MSDGASSKRGYSKRKAMQH---------EALSMKVIPNEETAP 1310 + D +S+ G +Q+ E L+ +I N P Sbjct: 933 IGDKFASRHGQKGTCGIQYRQEDMAFTCEGLAPDIIINPHAIP 975
>P61593:MCPH1_PANTR Microcephalin - Pan troglodytes (Chimpanzee)| Length = 835 Score = 32.3 bits (72), Expect = 6.4 Identities = 52/235 (22%), Positives = 85/235 (36%), Gaps = 5/235 (2%) Frame = +3 Query: 411 RRKRSVRLFISSPITVRHAEGTLETADHRFVLTRGPLNIKKMDCNGFPSEVSNQFRLGFP 590 +RKRS+R I + + +EG L+ GP ++ + C + Sbjct: 372 KRKRSIRRSIMPRLQLCRSEGRLQHV-------AGPA-LEALSCGESSYD---------- 413 Query: 591 IQWEKYVNSNMKQANEHTLSPEKSTEYSVEEFLCGSFANSLEHTL-PGFDFRTSKESTGN 767 + + N+K+ N L PE S +F C S + ++ DF + T Sbjct: 414 ---DYFSPDNLKERNSENLPPESQLPSSPAQFSCRSLSKKERTSIFEMSDFSCVGKKTRT 470 Query: 768 ADGPGLPNYVKPRVQEP--FGN-SGDYDNSMSNMAASEGL-CNDRVGMPDESFEDPGPGD 935 D + N+ + P GN G +S A E L C + G D E G Sbjct: 471 VD---ITNFTAKTISSPQKTGNGEGRATSSCVTSAPEEALRCCGQAGKEDACPEGNGFSY 527 Query: 936 TCNGQASRADNSHEDTQTDASGKRIVSHSVDSALVSNDIDKIEEEHGPSKLGNNS 1100 T A H+D T G S++ + D+ + + SK+ N+S Sbjct: 528 TIEDPA--LPKGHDDDLTPLEG------SLEEMKEAVDLKSTQNKGTTSKISNSS 574
>P11823:L100_ADE40 Late 100 kDa protein - Human adenovirus 40 (HAdV-40)| Length = 770 Score = 32.3 bits (72), Expect = 6.4 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -1 Query: 104 LGRHAPSSHFRDSGGGGAWRQGEPRGGGVRARG 6 +GR FR GGG G+PR GG R RG Sbjct: 700 VGRQPGRGSFRRGGGGADGELGQPRRGGPRGRG 732
>Q0UWA6:DED1_PHANO ATP-dependent RNA helicase DED1 - Phaeosphaeria nodorum (Septoria| nodorum) Length = 696 Score = 32.3 bits (72), Expect = 6.4 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 12/66 (18%) Frame = -1 Query: 182 PVGGRTHGGRRWSRSRR----------PVG*GAWFGL--GRHAPSSHFRDSGGGGAWRQG 39 P G+ +GG W+ + P G G W G G+ PS++ + GGGG G Sbjct: 82 PPPGQMNGGGNWANANAQAFTPRGRDGPQGGGGWGGAAPGKFDPSAYGKPGGGGG----G 137 Query: 38 EPRGGG 21 RG G Sbjct: 138 SARGSG 143
>Q86UR5:RIMS1_HUMAN Regulating synaptic membrane exocytosis protein 1 - Homo sapiens| (Human) Length = 1692 Score = 32.0 bits (71), Expect = 8.4 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Frame = +3 Query: 1188 RSGKVYEMSDGASSKRGYSKRKAMQHEA-----LSMKVIPNEETAPPAGPTSRKKGASVA 1352 + G + + + GA S+ K+ +Q + LS +++ APP+ P R KGA + Sbjct: 189 QDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPS 248 Query: 1353 QITALDKLQSHGPGRK 1400 Q Q+ GP +K Sbjct: 249 Q-------QALGPEQK 257
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila| melanogaster (Fruit fly) Length = 385 Score = 32.0 bits (71), Expect = 8.4 Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 6/70 (8%) Frame = -1 Query: 212 GGQRWSRSRRPVGGRTHGGRRWSRSRRPVG*GAWFG------LGRHAPSSHFRDSGGGGA 51 GG R + R G R GG W R G G W G G + GG G Sbjct: 206 GGPR-AGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264 Query: 50 WRQGEPRGGG 21 W Q GGG Sbjct: 265 WNQQGGSGGG 274
>P81066:IRX2_MOUSE Iroquois-class homeodomain protein IRX-2 - Mus musculus (Mouse)| Length = 474 Score = 32.0 bits (71), Expect = 8.4 Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 4/164 (2%) Frame = +3 Query: 915 EDPGPGDTCNGQASRADNSHEDTQTDASGKRIVSHSVDSALVSNDIDKIEEEHGPSKLGN 1094 ED GD + +D + + T+T A + I H VDS + + + E P + G Sbjct: 190 EDEDEGDASRSKEESSDKAQDGTETSAEDEGISLH-VDSLTDHSCSAESDGEKLPCRAG- 247 Query: 1095 NSVCPGTEHVLEVLNKVVSTEHGSVQCPKKLRSGKVYEMS--DGASSKRGYSKRKAMQHE 1268 +++C + + E +C + L K S G + +A Sbjct: 248 DALCESGSECKDKFEDLEDEEDEEDECERDLAPPKPVTSSPLTGVEAPLLSPAPEAAPRG 307 Query: 1269 ALSMKVIPNEETAPPA-GPTSRKKGASVAQITALD-KLQSHGPG 1394 K T+P A P S+ K S+A+I D K S GPG Sbjct: 308 GSGGKTPLGSRTSPGAPPPASKPKLWSLAEIATSDLKQPSLGPG 351
>Q5TM61:PP1RA_MACMU Serine/threonine-protein phosphatase 1 regulatory subunit 10 -| Macaca mulatta (Rhesus macaque) Length = 940 Score = 28.9 bits (63), Expect(2) = 8.4 Identities = 21/65 (32%), Positives = 23/65 (35%) Frame = -1 Query: 212 GGQRWSRSRRPVGGRTHGGRRWSRSRRPVG*GAWFGLGRHAPSSHFRDSGGGGAWRQGEP 33 GG RP G G S R G G+ G G GGGG R E Sbjct: 744 GGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGSGMGSGHRPHEGPGSSMGGGGGHRPHEG 803 Query: 32 RGGGV 18 GGG+ Sbjct: 804 PGGGI 808 Score = 21.6 bits (44), Expect(2) = 8.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -3 Query: 321 RWHGGRGGQEP 289 R GGRGG EP Sbjct: 705 RGRGGRGGNEP 715 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 323,913,364 Number of extensions: 7675340 Number of successful extensions: 25121 Number of sequences better than 10.0: 32 Number of HSP's gapped: 24629 Number of HSP's successfully gapped: 33 Length of query: 580 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 461 Effective length of database: 68,045,334 Effective search space: 31368898974 Effective search space used: 31368898974 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
