ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf74g05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072749:Os09g0286600 | 32 | 0.40 | 2 | AK065344:Os09g0286600 | 32 | 0.40 | 3 | AK060090:Os09g0286600 | 32 | 0.40 | 4 | AK110091: | 31 | 0.89 | 5 | Os09g0496400:Os09g0496400 | 30 | 2.0 | 6 | Os02g0195700:Os02g0195700 | 29 | 2.6 | 7 | AK110228: | 29 | 3.4 | 8 | AK100715:Os02g0241300 | 29 | 3.4 | 9 | Os11g0251700:Os11g0251700 | 28 | 5.8 | 10 | Os06g0233800:Os06g0233800 | 28 | 5.8 | 11 | AK103264:Os03g0816100 | 28 | 5.8 | 12 | AK100547:Os02g0145600 | 28 | 5.8 | 13 | Os05g0524600:Os05g0524600 | 28 | 7.5 | 14 | AK067937:Os02g0786200 | 28 | 7.5 | 15 | Os12g0465800:Os12g0465800 | 27 | 9.8 | 16 | Os10g0350400:Os10g0350400 | 27 | 9.8 | 17 | Os04g0404800:Os04g0404800 | 27 | 9.8 | 18 | Os02g0275900:Os02g0275900 | 27 | 9.8 | 19 | AK119496:Os02g0456000 | 27 | 9.8 | 20 | AK112093:Os01g0801200 | 27 | 9.8 | 21 | AK111895:Os01g0801200 | 27 | 9.8 |
|---|
>AK072749:Os09g0286600 | Length = 232 Score = 32.0 bits (71), Expect = 0.40 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +2 Query: 23 HDGKQPHVVPTVLGT--CRNRHGRVMDVLISGQLCGRDGASDDHGSGERRQR 172 HDG+ V P + G+ C + H V + G GR A DD G RR+R Sbjct: 55 HDGQHVVVAPLIRGSDKCVHGHEVVASTVGGGASGGRRRADDDDGERRRRRR 106
>AK065344:Os09g0286600 | Length = 232 Score = 32.0 bits (71), Expect = 0.40 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +2 Query: 23 HDGKQPHVVPTVLGT--CRNRHGRVMDVLISGQLCGRDGASDDHGSGERRQR 172 HDG+ V P + G+ C + H V + G GR A DD G RR+R Sbjct: 55 HDGQHVVVAPLIRGSDKCVHGHEVVASTVGGGASGGRRRADDDDGERRRRRR 106
>AK060090:Os09g0286600 | Length = 225 Score = 32.0 bits (71), Expect = 0.40 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +2 Query: 23 HDGKQPHVVPTVLGT--CRNRHGRVMDVLISGQLCGRDGASDDHGSGERRQR 172 HDG+ V P + G+ C + H V + G GR A DD G RR+R Sbjct: 48 HDGQHVVVAPLIRGSDKCVHGHEVVASTVGGGASGGRRRADDDDGERRRRRR 99
>AK110091: | Length = 1212 Score = 30.8 bits (68), Expect = 0.89 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +3 Query: 6 ANLHPSTMASNPMSYPRCWALVAIVMAASWTCSSPASSVDAMVP 137 + L +T + P S P+ + + AIV A WT + S +DA +P Sbjct: 1102 SQLASTTESPPPTSGPQAFRITAIVHDAPWTAPAACSPLDARLP 1145
>Os09g0496400:Os09g0496400 | Length = 104 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -3 Query: 213 PVNPTAHLKQLG-RVRCLRSPLPWSSEAPSR 124 P+ P H++Q+ R C RS PW + AP+R Sbjct: 63 PLQPDPHIRQVPIRADCERSARPWIAPAPAR 93
>Os02g0195700:Os02g0195700 | Length = 131 Score = 29.3 bits (64), Expect = 2.6 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = -3 Query: 282 GAGSSWTPWRP*LASPVLQRVRQPV-NPTAHLKQLGRVRCLRSPLPWSSEAPSRPQSWPE 106 G G TP A+P L+RVRQP + TA L + +P P S A S P P Sbjct: 16 GTGKGTTPAWVGKAAPNLRRVRQPPRSKTATAASLTWTSMVPTPPPLSGAASSGPTYAPS 75 Query: 105 MS 100 S Sbjct: 76 TS 77
>AK110228: | Length = 1551 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +3 Query: 21 STMASNPMSYPRCWALVAIVMAASWTCSSPASSVDAMVPPMTMAAASGGN---VPVPAAS 191 ST AS+ + P +A A AA T ++PA++ A P T + GG P PAA+ Sbjct: 988 STTASSAAAAPT-FAFGASSSAAPATSAAPAAAAAAAAPVSTPSFQFGGTAAATPAPAAT 1046 Query: 192 G 194 G Sbjct: 1047 G 1047
>AK100715:Os02g0241300 | Length = 373 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%) Frame = -2 Query: 205 PNGTPEAAGTGTLPPLAAAMVIGG--------TIASTELAGDEHVHDAAMTIATS 65 P+ P+ A T LPP + MV+GG ++ E A E + + M ++TS Sbjct: 18 PSVLPDPAATPCLPPRSKTMVLGGNSTHSRHPSVLPDEAAAMEMLEEEDMDLSTS 72
>Os11g0251700:Os11g0251700 | Length = 144 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = +2 Query: 50 PTVLGTCRNRHGRVMDVLISGQLCGRDGASDDHGSG----ERRQRTR 178 P V G+C G ++ ++ +G DDH SG +RR+R R Sbjct: 99 PAVFGSCEGADGALLH--LTNLTVATEGGGDDHSSGAVRLKRRRRRR 143
>Os06g0233800:Os06g0233800 | Length = 371 Score = 28.1 bits (61), Expect = 5.8 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Frame = -2 Query: 205 PNGTPEAA------GTGTLPPLAAAMVIGGTIASTELAGDEHVHDAAMTIATSAQHRG 50 P+ P AA G+ ++PP AA E A D++VH M +ATS+ + G Sbjct: 290 PSVVPAAAAPSPPPGSSSMPPTGAAAASSAP-PKEEAAEDDYVHCHGMDMATSSTNGG 346
>AK103264:Os03g0816100 | Length = 286 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +2 Query: 119 CGRDGASDDHGSGERRQRTRPSCFRCAVGFTGCRTRCNTGDAS 247 CG DG D G E +R RPS + A G RC+ AS Sbjct: 3 CGSDGGCRDGGGSEEFRRPRPS--KVAAGDLVEPARCSDAAAS 43
>AK100547:Os02g0145600 | Length = 222 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +2 Query: 41 HVVPTVLGTCRNRHGRVMDVLISGQLCGRDGASDDHGSGERRQRTRPSCFRCA 199 H+ P + R R++ + + G CG+ G DD G R + PS + C+ Sbjct: 36 HLPPLRVSPRRALAPRLLRLRVRGGACGQGGGGDDEG---REELVPPSTWPCS 85
>Os05g0524600:Os05g0524600 | Length = 886 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = -2 Query: 202 NGTPEAAGTGTLPPLAAAMVIGGTIASTELAGDEHVHDAAMTIATSAQHRGYDMG 38 N T A T+PPL A+ + I++ + D A MTI Q + MG Sbjct: 352 NITINATANSTMPPLINAVEVYSVISTANIGTDSQDVSAIMTIKAKYQVKKNWMG 406
>AK067937:Os02g0786200 | Length = 688 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +2 Query: 50 PTVLGTCRNR-HGRVMDVLISGQLCGRDGASDDHGSGERRQ 169 PT+L TC +G+ ++ +G G D SD HGSGE+++ Sbjct: 541 PTLLPTCDEEGNGKKLEETPAGNT-GTDQDSDVHGSGEQQK 580
>Os12g0465800:Os12g0465800 | Length = 194 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -3 Query: 219 RQPVNPTAHLKQLGRVRCLRSPLPWSSEAPSRPQSWPE 106 R P N AHL+ LG +R + P P PQ P+ Sbjct: 63 RFPSNIDAHLRPLGPIRFQQPPQPQPQPPQPPPQPQPQ 100
>Os10g0350400:Os10g0350400 | Length = 561 Score = 27.3 bits (59), Expect = 9.8 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 89 VMDVLISGQLCGRDGASDDHG 151 ++D L S +L GRDG+ DHG Sbjct: 181 LVDALSSSRLRGRDGSGGDHG 201
>Os04g0404800:Os04g0404800 | Length = 810 Score = 27.3 bits (59), Expect = 9.8 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 8/59 (13%) Frame = -3 Query: 234 VLQRVRQPVNPTA---HLKQLGRVRCLRSPLPWSSEA-----PSRPQSWPEMSTSMTRP 82 VL V +P+NPTA +G RC S W +E P +WP S T P Sbjct: 530 VLGSVGEPINPTAWRWFYDIIGDARCPISDTWWQTETGGFMITPLPGAWPLKPGSATFP 588
>Os02g0275900:Os02g0275900 | Length = 201 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -2 Query: 166 PPLAAAMVIGGTIASTELAGDEHVHDAAMTIATSAQH 56 PP+A + GG A E AG E V AA + H Sbjct: 74 PPVAGSAPSGGAAADEEAAGTERVGGAATSSTVGRLH 110
>AK119496:Os02g0456000 | Length = 229 Score = 27.3 bits (59), Expect = 9.8 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Frame = -3 Query: 291 RAPGAGSSWTPWRP*LASPVLQRVRQPVNP---TAHLKQLGRVRCLRSPLPWSSEAPSRP 121 R+P A ++ TP P P R+ + P T H R+ P P ++ +PS P Sbjct: 137 RSPPACATSTPRTPGRRPPSRAPRRRSIGPARSTPHAVLWRRMISRPLPPPRTTSSPSTP 196 Query: 120 QSWPEMSTSMTRP*RLRQVPSTVGTTWGCLPSWRD---VGWR 4 S P M+TS T W WR GWR Sbjct: 197 GS-PPMTTS-------------AATFWTSSAGWRGSRAEGWR 224
>AK112093:Os01g0801200 | Length = 341 Score = 27.3 bits (59), Expect = 9.8 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 11/80 (13%) Frame = -3 Query: 213 PVNPTAHLKQLGRVRCLRSPLPWSSEAPSRPQSWPEMST----------SMTRP*RLRQV 64 P N H+KQ C++S + W + PQ+ + S+ + Sbjct: 168 PTNWNNHVKQPTEANCMQSSVNWDNYVSQPPQATVQQSSGNWDMYVKQQDQANNWEAPTM 227 Query: 63 PSTVGTTWGCLPSW-RDVGW 7 P T L +W RD GW Sbjct: 228 PGTWDMKGDSLDAWKRDSGW 247
>AK111895:Os01g0801200 | Length = 341 Score = 27.3 bits (59), Expect = 9.8 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 11/80 (13%) Frame = -3 Query: 213 PVNPTAHLKQLGRVRCLRSPLPWSSEAPSRPQSWPEMST----------SMTRP*RLRQV 64 P N H+KQ C++S + W + PQ+ + S+ + Sbjct: 168 PTNWNNHVKQPTEANCMQSSVNWDNYVSQPPQATVQQSSGNWDMYVKQQDQANNWEAPTM 227 Query: 63 PSTVGTTWGCLPSW-RDVGW 7 P T L +W RD GW Sbjct: 228 PGTWDMKGDSLDAWKRDSGW 247 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,078,765 Number of extensions: 340442 Number of successful extensions: 1680 Number of sequences better than 10.0: 21 Number of HSP's gapped: 1675 Number of HSP's successfully gapped: 21 Length of query: 227 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 130 Effective length of database: 11,515,878 Effective search space: 1497064140 Effective search space used: 1497064140 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
