>P04947:KHSE_FREDI Homoserine kinase - Fremyella diplosiphon (Calothrix PCC 7601)|
          Length = 307
 Score = 32.7 bits (73), Expect = 1.3
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = -2

Query: 199 GTPEAAGTGTLPPLAAAMVIGGTIASTELAGDEHVHDAAMTIATSAQHRGYDMGLLAIVE 20
           G P A G G+    +A  ++GG +A+ +LAG+       M +A + +    D  + A++ 
Sbjct: 90  GVPLARGLGS----SATAIVGGLVAANQLAGEPLSQLQVMELAIAMEGHP-DNVVPALLG 144

Query: 19  GCRLA 5
           GCRLA
Sbjct: 145 GCRLA 149

>Q9BRZ2:TRI56_HUMAN Tripartite motif-containing protein 56 - Homo sapiens (Human)|
          Length = 755

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = -1

Query: 377 IETAEAAARHRLPAVPTAE-----AEAFCAR*CLGHRERDLLGRRGALSWRRRCCSGC 219
           +E AE AAR RL  +   E     A AF  R     RE ++L   GA++ R R   GC
Sbjct: 281 VEAAEEAARERLAELEGREQVARAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGC 338

>Q9CYI0:NJMU_MOUSE Protein Njmu-R1 - Mus musculus (Mouse)|
          Length = 393

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 134 ASDDHGSGE-RRQRTRPSCFRCAVGFTGCRTRCNTGDAS*GRHG 262
           +S++ GS E RR    PS   C   F G R   N GD+  GR G
Sbjct: 18  SSEEGGSAEERRLEPPPSSHYCLYSFRGSRLTQNRGDSDDGRSG 61

>Q6A7P0:TRUB_PROAC tRNA pseudouridine synthase B - Propionibacterium acnes|
          Length = 295

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 199 GTPEAAGTGTLPPLAAAMVIGGTIASTELAGDEHVHDAAMT 77
           GT +    GTL P+A+ +++ G   +T L G   +HD   T
Sbjct: 31  GTRKVGHAGTLDPMASGVLVVGVNRATRLLGHLSLHDKDYT 71


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 87,581,261
Number of extensions: 1596702
Number of successful extensions: 6993
Number of sequences better than 10.0: 4
Number of HSP's gapped: 6992
Number of HSP's successfully gapped: 4
Length of query: 227
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 118
Effective length of database: 70,788,284
Effective search space: 8353017512
Effective search space used: 8353017512
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)