ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AM231528.1| Sus scrofa MC1R gene for melanocortin 1 receptor... 42 2.6
2gb|DQ191185.1| Sus scrofa coreanus isolate S11 melanocortin rece... 42 2.6
3gb|AY624161.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
4gb|AY624160.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
5gb|AY624159.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
6gb|AY624156.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
7gb|AY624155.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
8gb|AY624154.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
9gb|AY624153.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
10gb|AY624152.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
11gb|AY624149.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
12gb|AY624148.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
13gb|AY624147.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
14gb|AY624146.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
15gb|AY624145.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
16gb|AY624143.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, M... 42 2.6
17gb|DQ191207.1| Sus scrofa coreanus isolate S6 melanocortin 1 rec... 42 2.6
18gb|DQ191204.1| Sus scrofa coreanus isolate S4-2 melanocortin 1 r... 42 2.6
19gb|AY520824.1| Sus scrofa coreanus melanocortin 1 receptor (MC1R... 42 2.6
20gb|AC134404.17| Mus musculus chromosome 3, clone RP24-321M14, co... 42 2.6
21gb|AY520823.1| Sus scrofa breed Jeju native black isolate NJAES-... 42 2.6
22gb|DQ118758.1| Sus scrofa breed Dongshan melanocortin 1 receptor... 42 2.6
23gb|DQ118757.1| Sus scrofa breed Shanggao melanocortin 1 receptor... 42 2.6
24gb|DQ118756.1| Sus scrofa breed Ningxiang melanocortin 1 recepto... 42 2.6
25emb|Z48717.1|CET10B9 Caenorhabditis elegans Cosmid T10B9, comple... 42 2.6
26gb|AF181964.1|AF181964 Sus scrofa melanocortin 1 receptor (MC1R)... 42 2.6
27gb|AY916522.1| Sus scrofa breed Min Pig melanocortin 1 receptor ... 42 2.6
28gb|DQ288945.1| Sus scrofa melanocortin 1 receptor (MC1R) gene, c... 42 2.6
29gb|AF082488.1|AF082488 Sus scrofa melanocortin receptor 1 (MC1R)... 42 2.6 
>emb|AM231528.1| Sus scrofa MC1R gene for melanocortin 1 receptor, MC1R*2 allele
          Length = 963
 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 363 cgtcatggacgtgctcatctgcggc 387
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>gb|DQ191185.1| Sus scrofa coreanus isolate S11 melanocortin receptor 1 (MC1R)
           gene, complete cds
          Length = 963

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 363 cgtcatggacgtgctcatctgcggc 387
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>gb|AY624161.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H5 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624160.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H4 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624159.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H3 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624156.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H22 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624155.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H21 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624154.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H20 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624153.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H2 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624152.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H19 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624149.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H15 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624148.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H14 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624147.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H13 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624146.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H12 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624145.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H11 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|AY624143.1| Sus scrofa melanocortin receptor 1 (MC1R) gene, MC1R-H1 allele,
           partial cds
          Length = 471

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 93  cgtcatggacgtgctcatctgcggc 117
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>gb|DQ191207.1| Sus scrofa coreanus isolate S6 melanocortin 1 receptor (MC1R) gene,
           complete cds
          Length = 963

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 363 cgtcatggacgtgctcatctgcggc 387
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>gb|DQ191204.1| Sus scrofa coreanus isolate S4-2 melanocortin 1 receptor (MC1R)
           gene, complete cds
          Length = 963

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 363 cgtcatggacgtgctcatctgcggc 387
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>gb|AY520824.1| Sus scrofa coreanus melanocortin 1 receptor (MC1R) gene, complete
           cds
          Length = 963

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 363 cgtcatggacgtgctcatctgcggc 387
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>gb|AC134404.17| Mus musculus chromosome 3, clone RP24-321M14, complete sequence
          Length = 218224

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   gctctgtggacgcgatggtgc 135
             |||||||||||||||||||||
Sbjct: 78164 gctctgtggacgcgatggtgc 78184
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>gb|AY520823.1| Sus scrofa breed Jeju native black isolate NJAES-2 melanocortin 1
           receptor (MC1R) gene, complete cds
          Length = 963

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 363 cgtcatggacgtgctcatctgcggc 387
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>gb|DQ118758.1| Sus scrofa breed Dongshan melanocortin 1 receptor (MC1R) gene,
           complete cds
          Length = 1504

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 806 cgtcatggacgtgctcatctgcggc 830
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>gb|DQ118757.1| Sus scrofa breed Shanggao melanocortin 1 receptor (MC1R) gene,
           complete cds
          Length = 1504

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 806 cgtcatggacgtgctcatctgcggc 830
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>gb|DQ118756.1| Sus scrofa breed Ningxiang melanocortin 1 receptor (MC1R) gene,
           complete cds
          Length = 1504

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 806 cgtcatggacgtgctcatctgcggc 830
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>emb|Z48717.1|CET10B9 Caenorhabditis elegans Cosmid T10B9, complete sequence
          Length = 34881

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 547   ttctattgcattttagtttcc 567
             |||||||||||||||||||||
Sbjct: 12647 ttctattgcattttagtttcc 12627
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>gb|AF181964.1|AF181964 Sus scrofa melanocortin 1 receptor (MC1R) gene, MC1R*5 allele,
           partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 354 cgtcatggacgtgctcatctgcggc 378
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>gb|AY916522.1| Sus scrofa breed Min Pig melanocortin 1 receptor (MC1R) gene,
           complete cds
          Length = 963

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 363 cgtcatggacgtgctcatctgcggc 387
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>gb|DQ288945.1| Sus scrofa melanocortin 1 receptor (MC1R) gene, complete cds
          Length = 1569

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 835 cgtcatggacgtgctcatctgcggc 859
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>gb|AF082488.1|AF082488 Sus scrofa melanocortin receptor 1 (MC1R) gene, MCIR*2 allele,
           partial cds
          Length = 758

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  cgtcatggacgtgctcatctccggc 112
           |||||||||||||||||||| ||||
Sbjct: 235 cgtcatggacgtgctcatctgcggc 259


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 86,427,506
Number of extensions: 4332165
Number of successful extensions: 103716
Number of sequences better than 10.0: 29
Number of HSP's gapped: 103716
Number of HSP's successfully gapped: 29
Length of query: 683
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 661
Effective length of database: 18,508,616,841
Effective search space: 12234195731901
Effective search space used: 12234195731901
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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