ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf83i03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121915:Os02g0629800 | 92 | 3e-19 | 2 | U72942:Os03g0130300 | 72 | 3e-13 | 3 | AK120826:Os03g0130300 | 72 | 3e-13 | 4 | AK071283:Os04g0189400 | 55 | 3e-08 | 5 | AK105157:Os01g0932700 | 41 | 6e-04 | 6 | Os04g0476000:Os04g0476000 | 30 | 1.4 | 7 | AK070916:Os08g0549200 | 29 | 3.2 | 8 | AK069066:Os08g0549200 | 29 | 3.2 | 9 | AK119459:Os01g0876200 | 28 | 5.5 |
|---|
>AK121915:Os02g0629800 | Length = 80 Score = 92.0 bits (227), Expect = 3e-19 Identities = 42/63 (66%), Positives = 50/63 (79%) Frame = +3 Query: 123 ATEMGATRVKMAGARDCVSQSHNFKGACLSSSNCAAVCRTENFPGGECHTPHVERKCFCK 302 ATEMG T+V A AR C+SQSH FKG C+SS+NCA VCRTE+FP GEC + +ERKCFCK Sbjct: 20 ATEMGTTKV--AEARHCLSQSHRFKGMCVSSNNCANVCRTESFPDGECKSHGLERKCFCK 77 Query: 303 RPC 311 + C Sbjct: 78 KVC 80
>U72942:Os03g0130300 | Length = 81 Score = 72.4 bits (176), Expect = 3e-13 Identities = 34/61 (55%), Positives = 39/61 (63%) Frame = +3 Query: 129 EMGATRVKMAGARDCVSQSHNFKGACLSSSNCAAVCRTENFPGGECHTPHVERKCFCKRP 308 EMG V +A AR C SQSH FKG C +NCA+VC TE FP G CH V R+C C +P Sbjct: 23 EMGGP-VMVAEARTCESQSHRFKGPCARKANCASVCNTEGFPDGYCH--GVRRRCMCTKP 79 Query: 309 C 311 C Sbjct: 80 C 80
>AK120826:Os03g0130300 | Length = 81 Score = 72.4 bits (176), Expect = 3e-13 Identities = 34/61 (55%), Positives = 39/61 (63%) Frame = +3 Query: 129 EMGATRVKMAGARDCVSQSHNFKGACLSSSNCAAVCRTENFPGGECHTPHVERKCFCKRP 308 EMG V +A AR C SQSH FKG C +NCA+VC TE FP G CH V R+C C +P Sbjct: 23 EMGGP-VMVAEARTCESQSHRFKGPCARKANCASVCNTEGFPDGYCH--GVRRRCMCTKP 79 Query: 309 C 311 C Sbjct: 80 C 80
>AK071283:Os04g0189400 | Length = 111 Score = 55.5 bits (132), Expect = 3e-08 Identities = 24/52 (46%), Positives = 32/52 (61%) Frame = +3 Query: 156 AGARDCVSQSHNFKGACLSSSNCAAVCRTENFPGGECHTPHVERKCFCKRPC 311 A AR+C + S+ FKG C+ +NCA VC TE F GG+C R+C C + C Sbjct: 62 AQARECETPSNEFKGICMMVANCANVCLTEGFSGGKC--SGFRRRCMCTKDC 111
>AK105157:Os01g0932700 | Length = 103 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +3 Query: 171 CVSQSHNFKGACLSSSNCAAVCRTENFPGGECHTPHVERKCFCKRPC 311 C ++S ++G C + NCA +C E + GG C + V KC C + C Sbjct: 23 CKARSKMYRGKCRGNRNCAMICVHEEYTGGYC-SKGVFSKCMCTKRC 68
>Os04g0476000:Os04g0476000 | Length = 475 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -3 Query: 549 PPYL*HHHTQIRHKHDVQPSKLPRPR 472 PP HHH + RH+H +P P+P+ Sbjct: 133 PPPHHHHHHRRRHRHSKKPKPQPQPQ 158
>AK070916:Os08g0549200 | Length = 660 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +3 Query: 201 ACLSSSNCAAVCRTENFPGGECHTPHVERKCFCKRPC*SVPPASAETS 344 AC+ C+ V +E + GG+ H P + C PP SA T+ Sbjct: 613 ACIGRKTCSLVVSSEVY-GGDVHCPGTTGTLAVQAKCSKRPPRSAATA 659
>AK069066:Os08g0549200 | Length = 848 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +3 Query: 201 ACLSSSNCAAVCRTENFPGGECHTPHVERKCFCKRPC*SVPPASAETS 344 AC+ C+ V +E + GG+ H P + C PP SA T+ Sbjct: 801 ACIGRKTCSLVVSSEVY-GGDVHCPGTTGTLAVQAKCSKRPPRSAATA 847
>AK119459:Os01g0876200 | Length = 158 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/34 (52%), Positives = 18/34 (52%) Frame = +2 Query: 332 RRDVRSTRPRSSSQFLPRASIRAVN*LCSVRRCV 433 RR RSTRP SS AS N LC VRR V Sbjct: 89 RRWERSTRPHSSGSGANGASSITGNPLCPVRRSV 122 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,100,070 Number of extensions: 235289 Number of successful extensions: 676 Number of sequences better than 10.0: 9 Number of HSP's gapped: 672 Number of HSP's successfully gapped: 9 Length of query: 221 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 124 Effective length of database: 11,515,878 Effective search space: 1427968872 Effective search space used: 1427968872 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
