ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf80e14 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os09g04130:12009.t00309:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6937 Score = 32.7 bits (65), Expect(4) = 2e-10 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 / -1 Query: 1274 RTRNSKELDTKTSNSTRRCNRKFN 1203 RTRNS L + +N RCNRK N Sbjct: 1450 RTRNSNRLTLRPAN*HNRCNRKLN 1379 Score = 32.2 bits (64), Expect(4) = 2e-10 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 1046 STRPRGHSSCKQSKNKQE 993 Score = 28.1 bits (55), Expect(4) = 2e-10 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -1 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 1150 *MKSTFTARLQLSKDAAP*QPIHRLQWSPRTCGAR 1046 Score = 25.8 bits (50), Expect(4) = 2e-10 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = -1 / -3 Query: 1140 LIYIFLAVSWTIGMKN 1093 + Y F+ + WTIG KN Sbjct: 1316 IYYFFVGLFWTIGKKN 1269 Score = 43.7 bits (89), Expect(2) = 5e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 360 GPITRARARQLNYQVSSFLSSYSS 431 Score = 37.7 bits (76), Expect(2) = 5e-07 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ PRG+VD Sbjct: 946 VKLSSLSSNLSAYPTCSCLFFDCLQDECPRGRVD 1047 Score = 43.7 bits (89), Expect(2) = 1e-06 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4090 GPITRARARQLNYQVSSFLSSYSS 4161 Score = 36.3 bits (73), Expect(2) = 1e-06 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ P G+VD Sbjct: 4676 VKLSSLSSNLSACPTCSCLFFDCLQDECPHGRVD 4777 Score = 31.3 bits (62), Expect(3) = 0.011 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 4775 QPGHEGTHPASNRRTSK 4725 Score = 28.6 bits (56), Expect(3) = 0.011 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4139 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 4044 Score = 27.6 bits (54), Expect(3) = 0.011 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD VD PT V R ALA P+P Sbjct: 4884 RLDEVDVHGPTTTVQRRCALATDTPSP 4804 Score = 30.4 bits (60), Expect(3) = 0.020 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -1 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 1045 QPGHEGTRPASNRRTSK 995 Score = 28.6 bits (56), Expect(3) = 0.020 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -1 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 409 ELT**FS*RARARVIGPSCCIWVDVDVSMVLM 314 Score = 27.6 bits (54), Expect(3) = 0.020 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -3 / -3 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD VD PT V R ALA P+P Sbjct: 1154 RLDEVDVHGPTTTVQRRCALATDTPSP 1074 Score = 33.6 bits (67), Expect(2) = 0.28 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 947 *NFHLYLAISVLILLVLACSSIACRTSALVAGLTRTTSSRRPL 1075 Score = 27.6 bits (54), Expect(2) = 0.28 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 304 MMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 402 Score = 32.7 bits (65), Expect(2) = 0.50 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR L+ L + PL Sbjct: 4677 *NFHLYLAISVLVLLVLACSSIACRMSALMAGLTRTTSSRRPL 4805 Score = 27.6 bits (54), Expect(2) = 0.50 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4034 MMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 4132 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 939 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 1046
>LOC_Os02g28400:12002.t02534:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9765 Score = 38.6 bits (78), Expect(5) = 3e-10 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 / -2 Query: 207 YLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLIT 106 +L+++L CT W CGC G+DVLIT Sbjct: 386 FLIVELTCTSVGNRTMKL*LWKCGCIVGVDVLIT 285 Score = 32.2 bits (64), Expect(5) = 3e-10 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = -1 / -1 Query: 1275 QNSKL*RTRH*DQQLDTT 1222 QNSKL* T+H*+QQ++TT Sbjct: 1329 QNSKL*STKH*NQQINTT 1276 Score = 31.3 bits (62), Expect(5) = 3e-10 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = -1 / -3 Query: 966 TLTIRLRTCEDVAP*QSLNQLR 901 TL IRL+ DVAP*QSL QL+ Sbjct: 1066 TLAIRLQLSGDVAP*QSLPQLQ 1001 Score = 30.4 bits (60), Expect(5) = 3e-10 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -2 / -1 Query: 878 HDQPDHEGLFPARKRRTSK 822 HDQP++EG+ ++ RTSK Sbjct: 975 HDQPNYEGICSCKQSRTSK 919 Score = 24.9 bits (48), Expect(5) = 3e-10 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = -1 / -2 Query: 1047 LKI*YHLIEAKLSLSFDE 994 L +*YHL+ +++S SFDE Sbjct: 1145 LGL*YHLMCSRVSRSFDE 1092 Score = 32.2 bits (64), Expect(3) = 6e-04 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 / -1 Query: 878 HDQPDHEGLFPARKRRTSK 822 HDQP HEG+ ++ RTSK Sbjct: 8238 HDQPKHEGICSCKQSRTSK 8182 Score = 30.9 bits (61), Expect(3) = 6e-04 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = -1 / -3 Query: 207 YLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLI 109 +L+++L C W GC+ G+DVLI Sbjct: 7648 FLIVELTCMIAGNRTMKLYLWKRGCTVGVDVLI 7550 Score = 29.9 bits (59), Expect(3) = 6e-04 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -1 / -3 Query: 966 TLTIRLRTCEDVAP*QSLNQL 904 TL IRL+ D AP*QSL++L Sbjct: 8329 TLAIRLQLSRDAAP*QSLHEL 8267 Score = 30.4 bits (60), Expect(3) = 0.002 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 / +3 Query: 905 SWFSDC*GATSSHVLSRIVKV 967 SW +DC*GATS SRI V Sbjct: 1005 SWGNDC*GATSPDSCSRIANV 1067 Score = 25.4 bits (49), Expect(3) = 0.002 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +2 / +1 Query: 1001 KDRDNFASIKWYQ 1039 KDRD I+WYQ Sbjct: 1099 KDRDTLEHIRWYQ 1137 Score = 22.1 bits (42), Expect(3) = 0.002 Identities = 9/28 (32%), Positives = 13/28 (46%) Frame = +2 / +3 Query: 797 NILIAILVSCLFFVCVQETDPRGQVDRA 880 N++ SC F + + PR DRA Sbjct: 894 NLVACSSCSCWFSIACRNKYPRSWADRA 977 Score = 29.5 bits (58), Expect(2) = 2.2 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQ 204 GP+T ARA QLNYQ Sbjct: 342 GPITHARACQLNYQ 383 Score = 29.0 bits (57), Expect(2) = 2.2 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 / +1 Query: 903 GVGLAIAKARRPHTFLVGSSKS 968 GVG+ IAKA+ P +VGS S Sbjct: 1003 GVGVTIAKAQHPRIVVVGSPTS 1068 Score = 27.6 bits (54), Expect(2) = 5.8 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -3 / -2 Query: 967 DFDDPTKNV*GRRALAIAKPTP 902 D DPT + G ALAI PTP Sbjct: 1067 DVGDPTTTIRGCCALAIVTPTP 1002 Score = 22.1 bits (42), Expect(2) = 5.8 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -2 / -3 Query: 1040 SDTT**RRSCPCLSMR 993 SDTT* R C LSMR Sbjct: 1138 SDTT*CARGCLDLSMR 1091
>LOC_Os04g18440:12004.t01586:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 853 Score = 41.4 bits (84), Expect(3) = 2e-08 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRA ARQLNYQV SF+ + S+ Sbjct: 79 GPITRAHARQLNYQVSSFLSSYSS 150 Score = 39.1 bits (79), Expect(3) = 2e-08 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 665 VKLLSLSSNFSACSTCSCLFFDCLQDECPRGRVD 766 Score = 21.7 bits (41), Expect(3) = 2e-08 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +1 / +2 Query: 568 WGNRD*GCFRNPSPRVTKLPLVSL 639 W NR C RNP+ + L+SL Sbjct: 611 WLNRPSACNRNPTILCLIVKLLSL 682 Score = 32.2 bits (64), Expect(2) = 0.15 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 765 STRPRGHSSCKQSKNKQE 712 Score = 23.5 bits (45), Expect(2) = 0.15 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 851 TARLQPSKDPAP*QPIHRLQWSPRTCGAR 765 Score = 33.6 bits (67), Expect = 3.7 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ FLLVLRL AG PSW G* Sbjct: 658 FDSETFIFI*QFQCLFYLFLLVLRLLAGRVPSWPG* 765 Score = 33.6 bits (67), Expect = 3.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 666 *NFYLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 794
>LOC_Os10g16650:12010.t01230:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1429 Score = 37.3 bits (75), Expect(5) = 2e-08 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGN 225 GP+TRAR QLNYQV SF+ + Sbjct: 511 GPITRARVCQLNYQVCSFLNS 573 Score = 30.4 bits (60), Expect(5) = 2e-08 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 / +1 Query: 905 SWFSDC*GATSSHVLSRIVKV 967 SW +DC*GATS SRI V Sbjct: 1246 SWCNDC*GATSLDSCSRIANV 1308 Score = 26.7 bits (52), Expect(5) = 2e-08 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +1 / +3 Query: 820 FLLVLRLRAGNRPSWSG*SC 879 FLLVL PSW G*SC Sbjct: 1158 FLLVLDCSQEQIPSWLG*SC 1217 Score = 23.1 bits (44), Expect(5) = 2e-08 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +3 / +3 Query: 993 SHRKTGTTSPLSS 1031 SHRKTGT S S+ Sbjct: 1332 SHRKTGTPSSTSN 1370 Score = 22.1 bits (42), Expect(5) = 2e-08 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = +2 / +2 Query: 107 VMRTSIPLLHP 139 +MRTS P +HP Sbjct: 455 MMRTSTPTIHP 487 Score = 33.6 bits (67), Expect(3) = 3e-05 Identities = 15/22 (68%), Positives = 18/22 (81%) Frame = -1 / -3 Query: 966 TLTIRLRTCEDVAP*QSLNQLR 901 TL IRL+ DVAP*QSL+QL+ Sbjct: 1307 TLAIRLQLSRDVAP*QSLHQLQ 1242 Score = 32.2 bits (64), Expect(3) = 3e-05 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 / -1 Query: 878 HDQPDHEGLFPARKRRTSK 822 HDQP+HEG+ + RTSK Sbjct: 1216 HDQPNHEGICSCEQSRTSK 1160 Score = 26.7 bits (52), Expect(3) = 3e-05 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = -1 / -2 Query: 207 YLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLI 109 +L+++L T W GC G+DVLI Sbjct: 555 HLIVELTYTSTGNRTMKLYLWRPGCIVGVDVLI 457
>LOC_Os05g21030:12005.t01864:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 910 Score = 43.7 bits (89), Expect(2) = 3e-08 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 136 GPITRARARQLNYQVSSFLSSYSS 207 Score = 38.6 bits (78), Expect(2) = 3e-08 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ PRG+VD Sbjct: 722 VKLSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 823 Score = 34.1 bits (68), Expect(2) = 0.013 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 723 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 851 Score = 29.0 bits (57), Expect(2) = 0.013 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 VMRTS P +HP VH N*I R Sbjct: 80 VMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 178 Score = 32.2 bits (64), Expect(2) = 0.060 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 822 STRPRGHSSCKQSKNKQE 769 Score = 28.6 bits (56), Expect(2) = 0.060 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 185 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 90 Score = 30.4 bits (60), Expect(2) = 3.9 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 821 QPGHEGTRPASNRRTSK 771 Score = 24.0 bits (46), Expect(2) = 3.9 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = -1 / -2 Query: 138 GCSNGIDVLIT 106 GC +G+DVLIT Sbjct: 111 GCIDGVDVLIT 79 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 715 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 822
>LOC_Os11g21960:12011.t01866:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9536 Score = 43.7 bits (89), Expect(3) = 4e-08 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 1927 GPITRARARQLNYQVSSFLSSYSS 1998 Score = 36.8 bits (74), Expect(3) = 4e-08 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S+ N+ SCLFF C+Q+ P G+VD Sbjct: 9348 VKLSSFSSNLSACPTCSCLFFDCLQDECPCGRVD 9449 Score = 27.6 bits (54), Expect(3) = 4e-08 Identities = 12/36 (33%), Positives = 15/36 (41%) Frame = +2 / +1 Query: 407 HHKESMKTLDEIFKTPLY*FRPLAIIGVAPPYFWAR 514 HHK + P++ L GVA P WAR Sbjct: 3781 HHKPDYSLTGLVATAPIHLVPRLLTCGVAVPLLWAR 3888 Score = 32.7 bits (65), Expect(4) = 5e-06 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 / -2 Query: 1274 RTRNSKELDTKTSNSTRRCNRKFN 1203 RTRNS L + +N RCNRK N Sbjct: 3019 RTRNSNRLTLRPAN*HNRCNRKLN 2948 Score = 32.2 bits (64), Expect(4) = 5e-06 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 2613 STRPRGHSSCKQSKNKQE 2560 Score = 28.6 bits (56), Expect(4) = 5e-06 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -1 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 1976 ELT**FS*RARARVIGPSCCIWGDMDVSMVLM 1881 Score = 28.1 bits (55), Expect(4) = 5e-06 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -1 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 2717 *MKSTFTARLQLSKDAAP*QPIHRLQWSPRTCGAR 2613 Score = 41.8 bits (85), Expect(2) = 2e-05 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRAR RQLNYQV SF+ + S+ Sbjct: 8762 GPITRARTRQLNYQVSSFLSSYSS 8833 Score = 34.5 bits (69), Expect(2) = 2e-05 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 9349 *NFHLFLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 9477 Score = 38.6 bits (78), Expect(2) = 0.014 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ PRG+VD Sbjct: 2513 VKLSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 2614 Score = 27.6 bits (54), Expect(2) = 0.014 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 1871 LMRTSTPSIHPCPPIYSMMVLLPALVHVN*IIR 1969 Score = 30.4 bits (60), Expect(2) = 0.028 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -1 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 2612 QPGHEGTRPASNRRTSK 2562 Score = 27.6 bits (54), Expect(2) = 0.028 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -3 / -3 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD VD PT V R ALA P+P Sbjct: 2721 RLDEVDVHGPTTTVQRRCALATDTPSP 2641 Score = 30.4 bits (60), Expect(2) = 0.13 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST P+G SC Q+KNKQE Sbjct: 9448 STRPQGHSSCKQSKNKQE 9395 Score = 25.4 bits (49), Expect(2) = 0.13 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGARST*PRGS 853 T RL+ +D AP*Q +++L+ GAR +G+ Sbjct: 9534 TARLQLSKDAAP*QPIHRLQWSPRTCGARQPGHKGT 9427 Score = 32.2 bits (64), Expect(2) = 0.89 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ + Q + FLLVLRL AG P W G* Sbjct: 9341 FDSETFIFF*QSQCLSYLFLLVLRLLAGRVPLWPG* 9448 Score = 27.6 bits (54), Expect(2) = 0.89 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +3 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 8706 MMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 8804 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 2514 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 2642 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 2506 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 2613
>LOC_Os04g17830:12004.t01530:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1351 Score = 43.7 bits (89), Expect(2) = 1e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 577 GPITRARARQLNYQVSSFLSSYSS 648 Score = 37.7 bits (76), Expect(2) = 1e-07 Identities = 18/36 (50%), Positives = 23/36 (63%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSWSG* Sbjct: 1156 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWSG* 1263 Score = 33.6 bits (67), Expect(3) = 0.001 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QPDHEG PA RRTSK Sbjct: 1262 QPDHEGTRPASNRRTSK 1212 Score = 28.6 bits (56), Expect(3) = 0.001 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 626 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 531 Score = 24.4 bits (47), Expect(3) = 0.001 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ ED P*Q +++L+ GAR Sbjct: 1349 TARLQPSEDAVP*QPIHRLQWSPRTCGAR 1263 Score = 37.7 bits (76), Expect(2) = 0.004 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 1163 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 1264 Score = 27.6 bits (54), Expect(2) = 0.004 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 521 MMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 619 Score = 35.9 bits (72), Expect = 0.75 Identities = 21/43 (48%), Positives = 23/43 (53%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LVV L + PL Sbjct: 1164 *NFHLYLAISVLVLLVLACSSIACRTSALVVGLTRTTSSRRPL 1292 Score = 32.2 bits (64), Expect(2) = 7.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 1263 STRPRGHSSCKQSKNKQE 1210 Score = 21.7 bits (41), Expect(2) = 7.5 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -1 / -2 Query: 138 GCSNGIDVLI 109 GC +G+DVLI Sbjct: 552 GCIDGVDVLI 523
>LOC_Os05g29730:12005.t02573:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1069 Score = 35.4 bits (71), Expect(4) = 1e-07 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTS 231 GP+TRARA QLN QV SF+ + S Sbjct: 294 GPITRARACQLNNQVSSFLSSFS 362 Score = 35.0 bits (70), Expect(4) = 1e-07 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +K F I SCLFF C+Q+ PRG++D Sbjct: 881 VKTFILI*QFSACSTCSCLFFDCLQDECPRGRID 982 Score = 24.9 bits (48), Expect(4) = 1e-07 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +3 / +2 Query: 900 LGVGLAIAKARRPHTFLVG 956 +G G+++AKA+R T LVG Sbjct: 1007 IGDGVSVAKAQRLWTVLVG 1063 Score = 23.1 bits (44), Expect(4) = 1e-07 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +2 / +2 Query: 107 VMRTSIPLLHP 139 VMRTS P +HP Sbjct: 239 VMRTSTPSIHP 271 Score = 29.9 bits (59), Expect(3) = 0.032 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = -1 / -2 Query: 864 PRGSVSCTQTKNKQE 820 PRG SC Q+KNKQE Sbjct: 972 PRGHSSCKQSKNKQE 928 Score = 26.7 bits (52), Expect(3) = 0.032 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGARST*PRGS 853 T RL+ +DVAP*Q +++L+ GAR + G+ Sbjct: 1067 TARLKPSKDVAP*QPIHRLQWSP*TCGARQSGHEGT 960 Score = 24.0 bits (46), Expect(3) = 0.032 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = -1 / -2 Query: 138 GCSNGIDVLIT 106 GC +G+DVLIT Sbjct: 270 GCIDGVDVLIT 238
>LOC_Os09g06220:12009.t00419:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 7304 Score = 32.2 bits (64), Expect(4) = 1e-07 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 2932 STRPRGHSSCKQSKNKQE 2879 Score = 27.2 bits (53), Expect(4) = 1e-07 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -1 / -1 Query: 1275 QNSKL*RTRH*DQQLDTT 1222 +NSKL* H*DQQ +TT Sbjct: 3344 KNSKL*SPSH*DQQTNTT 3291 Score = 26.3 bits (51), Expect(4) = 1e-07 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V GR LA P+P Sbjct: 3040 RLDEDDVPGPTTTVQGRCVLATDTPSP 2960 Score = 23.5 bits (45), Expect(4) = 1e-07 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 / -3 Query: 1143 NLIYIFLAVSWTIGMKNRSD 1084 N++Y F+A TIG K +D Sbjct: 3207 NILYFFVAFF*TIGKKKLND 3148 Score = 38.2 bits (77), Expect(2) = 2e-04 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TR RAR+LNY V SF+ + S+ Sbjct: 2243 GPITRTRARKLNYHVSSFLSSCSS 2314 Score = 34.1 bits (68), Expect(2) = 2e-04 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +2 / +3 Query: 821 SCLFFVCVQETDPRGQVD 874 SCLFF C+Q+ PRG+VD Sbjct: 2880 SCLFFDCLQDECPRGRVD 2933 Score = 33.1 bits (66), Expect(3) = 0.002 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = -1 / -2 Query: 216 KRKYLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLI 109 +R +++++ CT W GC +G+DVLI Sbjct: 2296 ERTHMIVEFTCTSAGNRTMKLYLWGRGCIDGVDVLI 2189 Score = 30.4 bits (60), Expect(3) = 0.002 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 2931 QPGHEGTRPASNRRTSK 2881 Score = 26.7 bits (52), Expect(3) = 0.002 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -2 / -2 Query: 1274 RTRNSKELDTKTSNSTRRCNRK 1209 RTRNS L TKTS T+ K Sbjct: 3343 RTRNSNRLHTKTSKLTQPMQSK 3278 Score = 32.2 bits (64), Expect = 9.5 Identities = 14/18 (77%), Positives = 14/18 (77%) Frame = +1 / +2 Query: 820 FLLVLRLRAGNRPSWSG* 873 FLLVLRL AG PSW G* Sbjct: 2879 FLLVLRLLAGRVPSWPG* 2932
>LOC_Os08g02760:12008.t00170:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1879 Score = 43.7 bits (89), Expect(2) = 1e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 1105 GPITRARARQLNYQVSSFLSSYSS 1176 Score = 37.7 bits (76), Expect(2) = 1e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 1691 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 1792 Score = 32.2 bits (64), Expect(3) = 0.005 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 1791 STRPRGHSSCKQSKNKQE 1738 Score = 28.6 bits (56), Expect(3) = 0.005 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 1154 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 1059 Score = 24.4 bits (47), Expect(3) = 0.005 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 1877 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 1791 Score = 35.4 bits (71), Expect(2) = 0.026 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 1684 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 1791 Score = 27.6 bits (54), Expect(2) = 0.026 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 1049 MMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 1147 Score = 33.6 bits (67), Expect = 3.7 Identities = 18/33 (54%), Positives = 19/33 (57%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRL 872 *+F L AIS L LACSS ACR LV L Sbjct: 1692 *NFHLYLAISVLVLLVLACSSIACRTSALVAGL 1790
>LOC_Os04g16590:12004.t01418:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3804 Score = 43.7 bits (89), Expect(2) = 1e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 3030 GPITRARARQLNYQVSSFLSSYSS 3101 Score = 38.6 bits (78), Expect(2) = 1e-07 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ PRG+VD Sbjct: 3616 VKLSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 3717 Score = 32.2 bits (64), Expect(3) = 0.017 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 3716 STRPRGHSSCKQSKNKQE 3663 Score = 28.6 bits (56), Expect(3) = 0.017 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 3079 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 2984 Score = 24.4 bits (47), Expect(3) = 0.017 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 3802 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 3716 Score = 34.1 bits (68), Expect(2) = 0.12 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 3617 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 3745 Score = 27.6 bits (54), Expect(2) = 0.12 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 2974 LMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 3072 Score = 30.4 bits (60), Expect(2) = 1.1 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 3715 QPGHEGTRPASNRRTSK 3665 Score = 22.1 bits (42), Expect(2) = 1.1 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 955 PTKNV*GRRALAIAKPTP 902 PT V RRALA P+P Sbjct: 3797 PTTTVQRRRALATDTPSP 3744 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 3609 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 3716
>LOC_Os08g19120:12008.t01733:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 2303 Score = 43.7 bits (89), Expect(2) = 2e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 1540 GPITRARARQLNYQVSSFLSSYSS 1611 Score = 37.7 bits (76), Expect(2) = 2e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 2126 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 2227 Score = 35.4 bits (71), Expect(2) = 0.031 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 2119 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 2226 Score = 27.6 bits (54), Expect(2) = 0.031 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 1484 LMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 1582 Score = 32.2 bits (64), Expect(2) = 0.14 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 2226 STRPRGHSSCKQSKNKQE 2173 Score = 28.6 bits (56), Expect(2) = 0.14 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -1 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 1589 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 1494 Score = 30.4 bits (60), Expect(2) = 1.1 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -1 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 2225 QPGHEGTRPASNRRTSK 2175 Score = 22.1 bits (42), Expect(2) = 1.1 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -1 / -1 Query: 951 LRTCEDVAP*QSLNQLREVIDHAGAR 874 L+ +DVAP*Q +++L+ GAR Sbjct: 2303 LQPSKDVAP*QPIHRLQWSPRTCGAR 2226 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 2127 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 2255
>LOC_Os11g23970:12011.t02017:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5509 Score = 43.7 bits (89), Expect(2) = 2e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4735 GPITRARARQLNYQVSSFLSSYSS 4806 Score = 38.6 bits (78), Expect(2) = 2e-07 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ PRG+VD Sbjct: 5321 VKLSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 5422 Score = 32.2 bits (64), Expect(2) = 0.072 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5421 STRPRGHSSCKQSKNKQE 5368 Score = 24.4 bits (47), Expect(2) = 0.072 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 5507 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 5421 Score = 34.1 bits (68), Expect(2) = 0.31 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 5322 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5450 Score = 26.7 bits (52), Expect(2) = 0.31 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4679 MMRTSPPSIHPRPPIYSMMVLLPALVHVN*IIR 4777 Score = 30.4 bits (60), Expect(2) = 2.4 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 5420 QPGHEGTRPASNRRTSK 5370 Score = 27.2 bits (53), Expect(2) = 2.4 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MV+M Sbjct: 4784 ELT**FS*RARARVIGPSCCIWGDVDVSMVVM 4689 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 5314 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 5421
>LOC_Os10g15170:12010.t01182:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3400 Score = 43.7 bits (89), Expect(2) = 2e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 1713 GPITRARARQLNYQVSSFLSSYSS 1784 Score = 37.7 bits (76), Expect(2) = 2e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 2299 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 2400 Score = 32.2 bits (64), Expect(3) = 0.014 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 2399 STRPRGHSSCKQSKNKQE 2346 Score = 28.6 bits (56), Expect(3) = 0.014 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -1 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 1762 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 1667 Score = 24.4 bits (47), Expect(3) = 0.014 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -3 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V R ALA P+P Sbjct: 2507 RLDEDDVHGPTTTVQRRCALATDTPSP 2427 Score = 35.4 bits (71), Expect(2) = 0.018 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 2292 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 2399 Score = 29.0 bits (57), Expect(2) = 0.018 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 VMRTS P +HP VH N*I R Sbjct: 1657 VMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 1755 Score = 35.0 bits (70), Expect = 1.4 Identities = 20/43 (46%), Positives = 23/43 (53%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L+ + PL Sbjct: 2300 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLMRTTSSRRPL 2428
>LOC_Os02g23820:12002.t02070:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7286 Score = 43.7 bits (89), Expect(2) = 3e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 6512 GPITRARARQLNYQVSSFLSSYSS 6583 Score = 38.6 bits (78), Expect(2) = 3e-07 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ PRG+VD Sbjct: 7098 VKLSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 7199 Score = 32.2 bits (64), Expect(3) = 0.051 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 7198 STRPRGHSSCKQSKNKQE 7145 Score = 28.6 bits (56), Expect(3) = 0.051 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 6561 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 6466 Score = 24.4 bits (47), Expect(3) = 0.051 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 7284 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 7198 Score = 34.1 bits (68), Expect(2) = 0.22 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 7099 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 7227 Score = 27.6 bits (54), Expect(2) = 0.22 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +3 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 6456 MMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 6554 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 7091 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 7198
>LOC_Os08g21770:12008.t01965:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4150 Score = 43.7 bits (89), Expect(2) = 3e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 2972 GPITRARARQLNYQVSSFLSSYSS 3043 Score = 37.7 bits (76), Expect(2) = 3e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 3558 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 3659 Score = 32.2 bits (64), Expect(3) = 0.034 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -1 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 3658 STRPRGHSSCKQSKNKQE 3605 Score = 28.6 bits (56), Expect(3) = 0.034 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -2 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 3021 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 2926 Score = 23.5 bits (45), Expect(3) = 0.034 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 / -2 Query: 975 ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 M+ T T L+ +D AP*Q +++L+ GAR Sbjct: 3759 MKTTFTA*LQLSKDAAP*QPIHRLQWSPRTCGAR 3658 Score = 35.4 bits (71), Expect(2) = 0.054 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 3551 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 3658 Score = 27.6 bits (54), Expect(2) = 0.054 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +3 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 2916 MMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 3014 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 3559 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 3687
>LOC_Os04g18470:12004.t01589:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 5905 Score = 43.7 bits (89), Expect(2) = 3e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4682 GPITRARARQLNYQVSSFLSSYSS 4753 Score = 38.2 bits (77), Expect(2) = 3e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 5268 VKLSSLASNFSACPTCSCLFFDCLQDECPRGRVD 5369 Score = 32.2 bits (64), Expect(3) = 0.008 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -1 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5368 STRPRGHSSCKQSKNKQE 5315 Score = 28.6 bits (56), Expect(3) = 0.008 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -2 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4731 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 4636 Score = 26.7 bits (52), Expect(3) = 0.008 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -1 / -2 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T R++ +D AP*Q +++L+ GAR Sbjct: 5472 *MKTTFTARVQLSKDAAP*QPIHRLQWSPRTCGAR 5368 Score = 35.0 bits (70), Expect(2) = 0.040 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 5261 FDSETFIFS*QFQCLSYLFLLVLRLLAGRVPSWPG* 5368 Score = 29.0 bits (57), Expect(2) = 0.040 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +2 / +3 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 VMRTS P +HP VH N*I R Sbjct: 4626 VMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 4724 Score = 30.4 bits (60), Expect(2) = 0.77 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -2 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 5367 QPGHEGTRPASNRRTSK 5317 Score = 22.6 bits (43), Expect(2) = 0.77 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -3 / -1 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D P+ V R ALA P+P Sbjct: 5476 RLDEDDVHGPSTTVQRRCALATDTPSP 5396 Score = 32.7 bits (65), Expect = 6.9 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 5269 *NFHL*LAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5397
>LOC_Os08g22270:12008.t02007:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4524 Score = 43.7 bits (89), Expect(2) = 3e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 2043 GPITRARARQLNYQVSSFLSSYSS 2114 Score = 37.7 bits (76), Expect(2) = 3e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 2629 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 2730 Score = 32.2 bits (64), Expect(3) = 0.002 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 2729 STRPRGHSSCKQSKNKQE 2676 Score = 28.6 bits (56), Expect(3) = 0.002 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 2092 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 1997 Score = 28.1 bits (55), Expect(3) = 0.002 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -3 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 2833 *MKSTFTARLQLSKDAAP*QPIHRLQWSPRTCGAR 2729 Score = 30.4 bits (60), Expect(2) = 0.029 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 2728 QPGHEGTRPASNRRTSK 2678 Score = 27.6 bits (54), Expect(2) = 0.029 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD VD PT V R ALA P+P Sbjct: 2837 RLDEVDVHGPTTTVQRRCALATDTPSP 2757 Score = 35.4 bits (71), Expect(2) = 0.058 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 2622 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 2729 Score = 27.6 bits (54), Expect(2) = 0.058 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 1987 LMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 2085 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 2630 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 2758
>LOC_Os04g16600:12004.t01419:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9279 Score = 43.7 bits (89), Expect(2) = 3e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4734 GPITRARARQLNYQVSSFLSSYSS 4805 Score = 38.6 bits (78), Expect(2) = 3e-07 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ PRG+VD Sbjct: 5320 VKLSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 5421 Score = 32.2 bits (64), Expect(2) = 0.006 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5420 STRPRGHSSCKQSKNKQE 5367 Score = 28.1 bits (55), Expect(2) = 0.006 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -3 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 5524 *MKSTFTARLQLSKDAAP*QPIHRLQWSPRTCGAR 5420 Score = 30.4 bits (60), Expect(2) = 0.028 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 5419 QPGHEGTRPASNRRTSK 5369 Score = 27.6 bits (54), Expect(2) = 0.028 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD VD PT V R ALA P+P Sbjct: 5528 RLDEVDVHGPTTTVQRRCALATDTPSP 5448 Score = 34.1 bits (68), Expect(2) = 0.27 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 5321 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5449 Score = 27.6 bits (54), Expect(2) = 0.27 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4678 MMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 4776 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 5313 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 5420
>LOC_Os10g16550:12010.t01220:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5062 Score = 43.7 bits (89), Expect(2) = 3e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4288 GPITRARARQLNYQVSSFLSSYSS 4359 Score = 37.7 bits (76), Expect(2) = 3e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 4874 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 4975 Score = 35.4 bits (71), Expect(2) = 0.026 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 4867 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 4974 Score = 29.0 bits (57), Expect(2) = 0.026 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 VMRTS P +HP VH N*I R Sbjct: 4232 VMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 4330 Score = 32.2 bits (64), Expect(3) = 0.027 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 4974 STRPRGHSSCKQSKNKQE 4921 Score = 28.6 bits (56), Expect(3) = 0.027 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4337 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 4242 Score = 24.4 bits (47), Expect(3) = 0.027 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 5060 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 4974 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 4875 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5003
>LOC_Os09g05080:12009.t00404:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5509 Score = 43.7 bits (89), Expect(2) = 4e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4735 GPITRARARQLNYQVSSFLSSYSS 4806 Score = 37.7 bits (76), Expect(2) = 4e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 5321 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 5422 Score = 32.2 bits (64), Expect(3) = 0.032 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5421 STRPRGHSSCKQSKNKQE 5368 Score = 28.6 bits (56), Expect(3) = 0.032 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4784 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 4689 Score = 24.4 bits (47), Expect(3) = 0.032 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 5507 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 5421 Score = 35.4 bits (71), Expect(2) = 0.069 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 5314 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 5421 Score = 27.6 bits (54), Expect(2) = 0.069 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4679 MMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 4777 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 5322 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5450
>LOC_Os01g33220:12001.t02893:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5510 Score = 43.7 bits (89), Expect(2) = 4e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4736 GPITRARARQLNYQVSSFLSSYSS 4807 Score = 37.7 bits (76), Expect(2) = 4e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 5322 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 5423 Score = 32.2 bits (64), Expect(3) = 0.032 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5422 STRPRGHSSCKQSKNKQE 5369 Score = 28.6 bits (56), Expect(3) = 0.032 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4785 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 4690 Score = 24.4 bits (47), Expect(3) = 0.032 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 5508 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 5422 Score = 35.4 bits (71), Expect(2) = 0.069 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 5315 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 5422 Score = 27.6 bits (54), Expect(2) = 0.069 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +3 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4680 MMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 4778 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 5323 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5451
>LOC_Os10g16560:12010.t01221:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8062 Score = 43.7 bits (89), Expect(2) = 5e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4735 GPITRARARQLNYQVSSFLSSYSS 4806 Score = 37.7 bits (76), Expect(2) = 5e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 5321 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 5422 Score = 32.2 bits (64), Expect(3) = 0.006 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5421 STRPRGHSSCKQSKNKQE 5368 Score = 28.6 bits (56), Expect(3) = 0.006 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4784 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 4689 Score = 28.1 bits (55), Expect(3) = 0.006 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -3 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 5525 *MKSTFTARLQLSKDAAP*QPIHRLQWSPRTCGAR 5421 Score = 30.4 bits (60), Expect(2) = 0.029 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 5420 QPGHEGTRPASNRRTSK 5370 Score = 27.6 bits (54), Expect(2) = 0.029 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD VD PT V R ALA P+P Sbjct: 5529 RLDEVDVHGPTTTVQRRCALATDTPSP 5449 Score = 35.4 bits (71), Expect(2) = 0.097 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 5314 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 5421 Score = 27.6 bits (54), Expect(2) = 0.097 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4679 MMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 4777 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 5322 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5450
>LOC_Os08g20220:12008.t01840:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10081 Score = 43.7 bits (89), Expect(2) = 6e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 2517 GPITRARARQLNYQVSSFLSSYSS 2588 Score = 37.7 bits (76), Expect(2) = 6e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 3106 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 3207 Score = 43.7 bits (89), Expect(2) = 2e-06 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 9307 GPITRARARQLNYQVSSFLSSYSS 9378 Score = 35.9 bits (72), Expect(2) = 2e-06 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+V+ Sbjct: 9893 VKLSSLSSNFSACSTCSCLFFDCLQDECPRGRVN 9994 Score = 32.7 bits (65), Expect(4) = 5e-06 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 / -2 Query: 1274 RTRNSKELDTKTSNSTRRCNRKFN 1203 RTRNS L + +N RCNRK N Sbjct: 3612 RTRNSNRLTLRPAN*HNRCNRKLN 3541 Score = 32.2 bits (64), Expect(4) = 5e-06 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 3206 STRPRGHSSCKQSKNKQE 3153 Score = 28.6 bits (56), Expect(4) = 5e-06 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -1 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 2566 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 2471 Score = 28.1 bits (55), Expect(4) = 5e-06 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -1 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 3310 *MKTTFTARLQLSKDAAP*QPIHRLQWSPRTCGAR 3206 Score = 35.9 bits (72), Expect(2) = 0.087 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 3099 FDSETFIFI*QFQCLSYMFLLVLRLLAGRVPSWPG* 3206 Score = 27.6 bits (54), Expect(2) = 0.087 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 2461 LMRTSTPSIHPRLPMYSMMVLLPALVHVN*IIR 2559 Score = 30.4 bits (60), Expect(2) = 0.23 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -1 / -2 Query: 870 T*PRGSVSCTQTKNKQE 820 T PRG SC Q+KNKQE Sbjct: 9990 TRPRGHSSCKQSKNKQE 9940 Score = 30.4 bits (60), Expect(2) = 0.23 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -1 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 3205 QPGHEGTRPASNRRTSK 3155 Score = 24.4 bits (47), Expect(2) = 0.23 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 10079 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 9993 Score = 24.4 bits (47), Expect(2) = 0.23 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -3 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V R ALA P+P Sbjct: 3314 RLDEDDVHGPTTTVQRRCALATDTPSP 3234 Score = 34.1 bits (68), Expect(2) = 0.29 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 9894 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 10022 Score = 27.6 bits (54), Expect(2) = 0.29 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 9251 MMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 9349 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 3107 *NFHLYLAISVLVLHVLACSSIACRTSALVAGLTRTTSSRRPL 3235 Score = 33.6 bits (67), Expect = 3.7 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ FLLVLRL AG PSW G* Sbjct: 9886 FDSETFIFI*QFQCLFYLFLLVLRLLAGRVPSWPG* 9993 Score = 28.6 bits (56), Expect(2) = 5.4 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = -2 / -3 Query: 869 PDHEGLFPARKRRTSKKPRLQSGYCEYKRKALL 771 P HEG PA RRTSK + C K K L Sbjct: 9989 PGHEGTRPASNRRTSKNK*NKH*NC*IKMKVSL 9891 Score = 28.6 bits (56), Expect(2) = 5.4 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 9356 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 9261
>LOC_Os04g18400:12004.t01582:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5447 Score = 41.4 bits (84), Expect(2) = 7e-07 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARA QLNYQV SF+ + S+ Sbjct: 471 GPITRARAHQLNYQVSSFLSSYSS 542 Score = 39.1 bits (79), Expect(2) = 7e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 1057 VKLLSLSSNFSACSTCSCLFFDCLQDECPRGRVD 1158 Score = 32.7 bits (65), Expect(3) = 5e-04 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 / -1 Query: 1274 RTRNSKELDTKTSNSTRRCNRKFN 1203 RTRNS L + +N RCNRK N Sbjct: 1565 RTRNSNRLTLRPAN*HNRCNRKLN 1494 Score = 32.2 bits (64), Expect(3) = 5e-04 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -1 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 1157 STRPRGHSSCKQSKNKQE 1104 Score = 26.7 bits (52), Expect(3) = 5e-04 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -1 / -2 Query: 975 ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 1258 MKTTFTARLQLSKDPAP*QPIHRLQWSPRTCGAR 1157 Score = 33.6 bits (67), Expect(2) = 0.55 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ FLLVLRL AG PSW G* Sbjct: 1050 FDSETFIFI*QFQCLFYLFLLVLRLLAGRVPSWPG* 1157 Score = 26.3 bits (51), Expect(2) = 0.55 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 VMRT P +HP VH N*I R Sbjct: 415 VMRTPTPSIHPCLPMYSMMVLLPALVHIN*IIR 513 Score = 33.6 bits (67), Expect = 3.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 1058 *NFYLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 1186
>LOC_Os04g18980:12004.t01639:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12428 Score = 43.7 bits (89), Expect(2) = 8e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 3473 GPITRARARQLNYQVSSFLSSYSS 3544 Score = 43.7 bits (89), Expect(2) = 8e-07 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 8630 GPITRARARQLNYQVSSFLSSYSS 8701 Score = 37.7 bits (76), Expect(2) = 8e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 4059 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 4160 Score = 37.7 bits (76), Expect(2) = 8e-07 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 9216 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 9317 Score = 32.2 bits (64), Expect(2) = 0.003 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 9316 STRPRGHSSCKQSKNKQE 9263 Score = 29.0 bits (57), Expect(2) = 0.003 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -3 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 9420 *MKTTFTARLQLSKDAAP*QPIHRLQWSPQTCGAR 9316 Score = 32.2 bits (64), Expect(2) = 0.006 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 4159 STRPRGHSSCKQSKNKQE 4106 Score = 28.1 bits (55), Expect(2) = 0.006 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -3 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 4263 *MKTTFTARLQLSKDAAP*QPIHRLQWSPRTCGAR 4159 Score = 36.3 bits (73), Expect(2) = 0.078 Identities = 21/43 (48%), Positives = 23/43 (53%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L +*PL Sbjct: 4060 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSR*PL 4188 Score = 27.6 bits (54), Expect(2) = 0.078 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +3 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 3417 LMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 3515 Score = 35.0 bits (70), Expect(2) = 0.19 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG 870 F ++ F+ Q+ + FLLVLRL AG PSW G Sbjct: 9209 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG 9313 Score = 27.6 bits (54), Expect(2) = 0.19 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +3 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 8574 MMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 8672 Score = 30.4 bits (60), Expect(2) = 0.22 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 4158 QPGHEGTRPASNRRTSK 4108 Score = 24.4 bits (47), Expect(2) = 0.22 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V R ALA P+P Sbjct: 4267 RLDEDDVHGPTTTVQRRCALATDTPSP 4187 Score = 28.1 bits (55), Expect(2) = 0.98 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -2 / -3 Query: 869 PDHEGLFPARKRRTSK 822 P HEG PA RRTSK Sbjct: 9312 PGHEGTRPASNRRTSK 9265 Score = 24.4 bits (47), Expect(2) = 0.98 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V R ALA P+P Sbjct: 9424 RLDEDDVHGPTTTVQRRCALATDTPSP 9344 Score = 35.4 bits (71), Expect = 1.0 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 4052 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 4159 Score = 32.7 bits (65), Expect = 6.9 Identities = 17/30 (56%), Positives = 18/30 (60%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLV 863 *+F L AIS L LACSS ACR LV Sbjct: 9217 *NFHLYLAISVLVLLVLACSSIACRTSALV 9306
>LOC_Os12g26500:12012.t02363:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4493 Score = 42.3 bits (86), Expect(2) = 1e-06 Identities = 16/21 (76%), Positives = 19/21 (90%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGN 225 GP+TRARARQLNYQV SF+ + Sbjct: 3719 GPITRARARQLNYQVSSFLSS 3781 Score = 37.3 bits (75), Expect(2) = 1e-06 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +K+ S N+ SCLFF C+Q+ PRG+VD Sbjct: 4305 VKVSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 4406 Score = 39.6 bits (80), Expect(2) = 7e-05 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTS 231 G +TRARARQLNYQV SF+ + S Sbjct: 313 GSITRARARQLNYQVSSFLSSYS 381 Score = 33.6 bits (67), Expect(2) = 7e-05 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F +++F+ Q + FLLVLRL AG PSW G* Sbjct: 4298 FDSESFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 4405 Score = 32.2 bits (64), Expect(3) = 0.022 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 4405 STRPRGHSSCKQSKNKQE 4352 Score = 28.6 bits (56), Expect(3) = 0.022 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 3768 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 3673 Score = 24.4 bits (47), Expect(3) = 0.022 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 4491 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 4405 Score = 33.6 bits (67), Expect(2) = 0.077 Identities = 20/43 (46%), Positives = 21/43 (48%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 * F L AIS L LACSS ACR LV L + PL Sbjct: 4306 *KFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 4434 Score = 29.0 bits (57), Expect(2) = 0.077 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 VMRTS P +HP VH N*I R Sbjct: 257 VMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 355 Score = 30.4 bits (60), Expect(2) = 8.8 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 4404 QPGHEGTRPASNRRTSK 4354 Score = 24.9 bits (48), Expect(2) = 8.8 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -2 / -1 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V P C +MVLM Sbjct: 362 ELT**FS*RARARVIEPSCCIWGDVDVSMVLM 267
>LOC_Os03g37700:12003.t03222:unspliced-genomic hypothetical protein| Length = 1673 Score = 40.9 bits (83), Expect(3) = 1e-06 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+ RARARQLNYQV SF+ + S+ Sbjct: 1259 GPIIRARARQLNYQVCSFVHSYSS 1330 Score = 24.9 bits (48), Expect(3) = 1e-06 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +2 / +3 Query: 107 VMRTSIPLLHP 139 VMRTSIP +HP Sbjct: 1203 VMRTSIPPIHP 1235 Score = 24.0 bits (46), Expect(3) = 1e-06 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = +1 / +2 Query: 268 TLVVLMNEGPSMDRKDIRWSG 330 TLV+L N+G + W+G Sbjct: 1355 TLVLLRNDGEDQKQSGFAWAG 1417
>LOC_Os09g03870:12009.t00283:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 20740 Score = 43.7 bits (89), Expect(3) = 1e-06 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 15163 GPITRARARQLNYQVSSFLSSYSS 15234 Score = 35.4 bits (71), Expect(3) = 1e-06 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL N SCLFF C+Q+ PRG+VD Sbjct: 15749 VKLSFLSSNFSACSTCSCLFFDCLQDECPRGRVD 15850 Score = 25.8 bits (50), Expect(3) = 1e-06 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +3 / +3 Query: 1119 QPKKYILGLDHHIRTNLSLC 1178 Q K Y+L LD HI L+ C Sbjct: 18873 QDKLYLLSLDDHIMNILNAC 18932 Score = 40.9 bits (83), Expect(2) = 6e-06 Identities = 16/23 (69%), Positives = 20/23 (86%) Frame = +1 / +3 Query: 166 PVTRARARQLNYQVLSFIGNTSN 234 P+TRARARQLNYQV SF+ + S+ Sbjct: 8295 PITRARARQLNYQVSSFLSSYSS 8363 Score = 38.2 bits (77), Expect(2) = 6e-06 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 8878 VKLSSLSSNFSACSTCSCLFFDCLQDECPRGRVD 8979 Score = 32.7 bits (65), Expect(3) = 0.003 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 / -3 Query: 1274 RTRNSKELDTKTSNSTRRCNRKFN 1203 RTRNS L + +N RCNRK N Sbjct: 9386 RTRNSNRLTLRPAN*HNRCNRKLN 9315 Score = 32.2 bits (64), Expect(3) = 0.003 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 8978 STRPRGHSSCKQSKNKQE 8925 Score = 27.6 bits (54), Expect(3) = 0.003 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -1 / -1 Query: 975 ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 9079 MKTTFTARLQPSKDAAP*QPIHRLQWSPRTCGAR 8978 Score = 32.2 bits (64), Expect(2) = 0.049 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 15849 STRPRGHSSCKQSKNKQE 15796 Score = 24.9 bits (48), Expect(2) = 0.049 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V R ALA P+P Sbjct: 15957 RLDEDDVQGPTTTVQRRCALATDTPSP 15877 Score = 30.9 bits (61), Expect(2) = 0.12 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSKKPRLQSGYCEYKRKALL 771 QP HEG PA RRTSK + C K K L Sbjct: 15848 QPGHEGTRPASNRRTSKNK*NKH*NC*IKMKVSL 15747 Score = 24.9 bits (48), Expect(2) = 0.12 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 / -3 Query: 975 ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 M+ T RL+ +D AP*Q +++L+ GAR Sbjct: 15950 MKTTFRARLQPSKDAAP*QPIHRLQWSPRTCGAR 15849 Score = 30.9 bits (61), Expect(2) = 0.16 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = -2 / -1 Query: 872 QPDHEGLFPARKRRTSKKPRLQSGYCEYKRKALL 771 QP HEG PA RRTSK + C K K L Sbjct: 8977 QPGHEGTRPASNRRTSKNK*NKH*NC*IKMKVSL 8876 Score = 24.4 bits (47), Expect(2) = 0.16 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -3 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V R ALA P+P Sbjct: 9086 RLDEDDVHGPTTTVQRRCALATDTPSP 9006 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 8879 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 9007 Score = 26.3 bits (51), Expect(2) = 3.0 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = -2 / -3 Query: 1253 LDTKTSNSTRRCN 1215 L+ K SN+TRRCN Sbjct: 950 LNAKNSNTTRRCN 912 Score = 24.4 bits (47), Expect(2) = 3.0 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -1 / -1 Query: 1212 QIQLSKLLKRLCKGSDWFG 1156 QIQ SK K C G+ W G Sbjct: 910 QIQQSKN*KEQCNGTIWLG 854 Score = 33.6 bits (67), Expect = 3.7 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ FLLVLRL AG PSW G* Sbjct: 8871 FDSETFIFI*QFQCLFYLFLLVLRLLAGRVPSWPG* 8978 Score = 33.6 bits (67), Expect = 3.7 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ FLLVLRL AG PSW G* Sbjct: 15742 FDSETFIFI*QFQCLFYLFLLVLRLLAGRVPSWPG* 15849 Score = 32.2 bits (64), Expect = 9.5 Identities = 19/43 (44%), Positives = 21/43 (48%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F AIS L LACSS ACR LV L + PL Sbjct: 15750 *NFHFYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 15878
>LOC_Os04g17840:12004.t01531:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5509 Score = 43.7 bits (89), Expect(2) = 1e-06 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4735 GPITRARARQLNYQVSSFLSSYSS 4806 Score = 35.9 bits (72), Expect(2) = 1e-06 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 5314 FDSETFIFIYQFQCLSYLFLLVLRLIAGRVPSWPG* 5421 Score = 33.1 bits (66), Expect(2) = 0.17 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = -1 / -2 Query: 903 REVIDHAGARST*PRGSVSCTQTKNKQE 820 R V + ST PRG SC Q+KNKQE Sbjct: 5451 RMVAANLWCASTRPRGHSSCNQSKNKQE 5368 Score = 28.6 bits (56), Expect(2) = 0.17 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4784 ELT**FS*RARARVIGPSCCTWGDLDVSMVLM 4689 Score = 29.5 bits (58), Expect(2) = 0.58 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 5420 QPGHEGTRPAINRRTSK 5370 Score = 24.0 bits (46), Expect(2) = 0.58 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L GAR Sbjct: 5507 TARLQLSKDAAP*QPIHRLEWSPRTCGAR 5421 Score = 30.9 bits (61), Expect(2) = 1.3 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF +Q+ PRG+VD Sbjct: 5321 VKLSSLSINFSACPTCSCLFFD*LQDECPRGRVD 5422 Score = 27.6 bits (54), Expect(2) = 1.3 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4679 MMRTSTPSIHPSPPMYSMMVLLPALVHVN*IIR 4777
>LOC_Os08g22330:12008.t02012:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3990 Score = 43.7 bits (89), Expect(2) = 1e-06 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 3216 GPITRARARQLNYQVSSFLSSYSS 3287 Score = 35.4 bits (71), Expect(2) = 1e-06 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 3795 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 3902 Score = 32.2 bits (64), Expect(3) = 0.018 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 3902 STRPRGHSSCKQSKNKQE 3849 Score = 28.6 bits (56), Expect(3) = 0.018 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 3265 ELT**FS*RARARVIGPSCCTWGDMDVSMVLM 3170 Score = 24.4 bits (47), Expect(3) = 0.018 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 3988 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 3902 Score = 35.0 bits (70), Expect(2) = 0.070 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL N SCLFF C+Q+ PRG+VD Sbjct: 3802 VKLSFLSSNFSACPTCSCLFFDCLQDECPRGRVD 3903 Score = 27.6 bits (54), Expect(2) = 0.070 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 3160 MMRTSTPSIHPCPPMYSMMVLLPALVHVN*IIR 3258 Score = 32.2 bits (64), Expect(2) = 5.9 Identities = 19/43 (44%), Positives = 21/43 (48%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F AIS L LACSS ACR LV L + PL Sbjct: 3803 *NFHFYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 3931 Score = 23.5 bits (45), Expect(2) = 5.9 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +2 / +3 Query: 608 QGLRNCLSFPSYIQ 649 QGL NC F SY+Q Sbjct: 2163 QGLCNCKLFRSYLQ 2204
>LOC_Os08g22340:12008.t02013:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5508 Score = 43.7 bits (89), Expect(2) = 2e-06 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4734 GPITRARARQLNYQVSSFLSSYSS 4805 Score = 35.4 bits (71), Expect(2) = 2e-06 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 5313 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 5420 Score = 32.2 bits (64), Expect(3) = 0.032 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5420 STRPRGHSSCKQSKNKQE 5367 Score = 28.6 bits (56), Expect(3) = 0.032 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4783 ELT**FS*RARARVIGPSCCTWGDMDVSMVLM 4688 Score = 24.4 bits (47), Expect(3) = 0.032 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 5506 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 5420 Score = 35.0 bits (70), Expect(2) = 0.093 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL N SCLFF C+Q+ PRG+VD Sbjct: 5320 VKLSFLSSNFSACPTCSCLFFDCLQDECPRGRVD 5421 Score = 27.6 bits (54), Expect(2) = 0.093 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4678 MMRTSTPSIHPCPPMYSMMVLLPALVHVN*IIR 4776 Score = 32.2 bits (64), Expect = 9.5 Identities = 19/43 (44%), Positives = 21/43 (48%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F AIS L LACSS ACR LV L + PL Sbjct: 5321 *NFHFYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5449
>LOC_Os06g25890:12006.t02396:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5508 Score = 43.7 bits (89), Expect(2) = 2e-06 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4734 GPITRARARQLNYQVSSFLSSYSS 4805 Score = 35.4 bits (71), Expect(2) = 2e-06 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 5313 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 5420 Score = 30.4 bits (60), Expect(3) = 0.099 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 5419 QPGHEGTRPASNRRTSK 5369 Score = 28.6 bits (56), Expect(3) = 0.099 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4783 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 4688 Score = 24.4 bits (47), Expect(3) = 0.099 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 5506 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 5420 Score = 32.7 bits (65), Expect(2) = 0.41 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF +Q+ PRG+VD Sbjct: 5320 VKLSSLSSNFSACPTCSCLFFDYLQDECPRGRVD 5421 Score = 27.6 bits (54), Expect(2) = 0.41 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4678 MMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 4776 Score = 32.2 bits (64), Expect = 9.5 Identities = 19/43 (44%), Positives = 21/43 (48%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS CR LV L + PL Sbjct: 5321 *NFHLYLAISVLVLLVLACSSITCRTSALVAGLTRTTSSRRPL 5449
>LOC_Os05g21020:12005.t01863:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5509 Score = 43.7 bits (89), Expect(2) = 2e-06 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4735 GPITRARARQLNYQVSSFLSSYSS 4806 Score = 35.4 bits (71), Expect(2) = 2e-06 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +K S N+ SCLFF C+Q+ PRG+VD Sbjct: 5321 VKPSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 5422 Score = 32.2 bits (64), Expect(3) = 0.032 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5421 STRPRGHSSCKQSKNKQE 5368 Score = 28.6 bits (56), Expect(3) = 0.032 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4784 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 4689 Score = 24.4 bits (47), Expect(3) = 0.032 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 5507 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 5421 Score = 33.1 bits (66), Expect(2) = 0.31 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 5314 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 5421 Score = 27.6 bits (54), Expect(2) = 0.31 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4679 MMRTSTPSIHPRPPIYSMMVLLPALVHVN*IIR 4777
>LOC_Os06g23660:12006.t02178:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 817 Score = 42.3 bits (86), Expect(2) = 2e-06 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ S+ Sbjct: 54 GPITRARARQLNYQVSSFLSLCSS 125 Score = 34.1 bits (68), Expect(2) = 2e-06 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +2 / +1 Query: 821 SCLFFVCVQETDPRGQVD 874 SCLFF C+Q+ PRG+VD Sbjct: 688 SCLFFDCLQDECPRGRVD 741 Score = 31.3 bits (62), Expect(2) = 3.6 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +1 / +3 Query: 820 FLLVLRLRAGNRPSWSG*SCSGVINN 897 FLLVLRL AG PSW G* + +N Sbjct: 687 FLLVLRLLAG*VPSWPG*HTPQIRSN 764 Score = 23.1 bits (44), Expect(2) = 3.6 Identities = 10/28 (35%), Positives = 11/28 (39%) Frame = +2 / +1 Query: 110 MRTSIPLLHPXXXXXXXXXXXXXXVHAN 193 MRTS P +HP VH N Sbjct: 1 MRTSTPSIHPRLCKYDLMVLLPALVHVN 84 Score = 32.2 bits (64), Expect = 9.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 740 STRPRGHSSCKQSKNKQE 687
>LOC_Os04g24370:12004.t02150:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7383 Score = 41.4 bits (84), Expect(2) = 2e-06 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRAR RQLNYQV SF+ + S+ Sbjct: 4702 GPITRARERQLNYQVSSFLSSYSS 4773 Score = 37.7 bits (76), Expect(2) = 2e-06 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 5290 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 5391 Score = 32.2 bits (64), Expect(2) = 0.009 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5390 STRPRGHSSCKQSKNKQE 5337 Score = 27.6 bits (54), Expect(2) = 0.009 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -3 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 5494 *MKSTFTARLQLSKDAAP*QPIHRLQWSPRICGAR 5390 Score = 30.4 bits (60), Expect(2) = 0.095 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 5389 QPGHEGTRPASNRRTSK 5339 Score = 25.8 bits (50), Expect(2) = 0.095 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 +LD VD PT V R ALA P+P Sbjct: 5498 QLDEVDVHGPTTTVQRRCALATDTPSP 5418 Score = 35.4 bits (71), Expect(2) = 0.72 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 5283 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 5390 Score = 24.4 bits (47), Expect(2) = 0.72 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP V+ N*I R Sbjct: 4646 MMRTSTPSIHPCPPMYSMMVLLPALVNVN*IIR 4744 Score = 34.5 bits (69), Expect = 1.9 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 5291 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTNSRRPL 5419
>LOC_Os01g29900:12001.t02672:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5510 Score = 40.0 bits (81), Expect(2) = 2e-06 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEH 246 GP+TRARARQLNY V SF+ + S+ H Sbjct: 4735 GPITRARARQLNY*VSSFLSSYSSSLYH 4818 Score = 38.6 bits (78), Expect(2) = 2e-06 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ PRG+VD Sbjct: 5322 VKLSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 5423 Score = 32.2 bits (64), Expect(3) = 0.032 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5422 STRPRGHSSCKQSKNKQE 5369 Score = 28.6 bits (56), Expect(3) = 0.032 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -1 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4784 ELT**FS*RARARVIGPSCCIWGDVDVSMVLM 4689 Score = 24.4 bits (47), Expect(3) = 0.032 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 5508 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 5422 Score = 34.1 bits (68), Expect(2) = 0.17 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 5323 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5451 Score = 27.6 bits (54), Expect(2) = 0.17 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4679 MMRTSTPSIHPHPPIYSMMVLLPALVHVN*IIR 4777 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 5315 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 5422 Score = 30.4 bits (60), Expect(2) = 5.9 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 5421 QPGHEGTRPASNRRTSK 5371 Score = 25.8 bits (50), Expect(2) = 5.9 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = -1 / -3 Query: 141 CGCSNGIDVLI 109 CGC +G+DVLI Sbjct: 4713 CGCIDGVDVLI 4681
>LOC_Os06g35210:12006.t03218:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7515 Score = 40.0 bits (81), Expect(2) = 3e-06 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 G +TRARARQLNYQV SF+ + S+ Sbjct: 6741 GSITRARARQLNYQVSSFLSSYSS 6812 Score = 38.6 bits (78), Expect(2) = 3e-06 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 7327 VKLSSLYSNFSACSTCSCLFFNCLQDECPRGRVD 7428 Score = 30.9 bits (61), Expect(3) = 0.003 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 / -3 Query: 1274 RTRNSKELDTKTSNSTRRCNRKFN 1203 RTRNS L + +N RCN+K N Sbjct: 973 RTRNSNRLTLRPAN*HNRCNQKLN 902 Score = 30.4 bits (60), Expect(3) = 0.003 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST P+G SC Q+KNKQE Sbjct: 569 STWPQGHSSCKQSKNKQE 516 Score = 28.6 bits (56), Expect(3) = 0.003 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -1 / -3 Query: 975 ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGARST*PRGS 853 M+ T T RL+ +D AP*Q +++L+ GAR +G+ Sbjct: 670 MKMTFTARLQPSKDAAP*QPIHRLQWSPRTCGARQPGHKGT 548 Score = 31.3 bits (62), Expect(2) = 0.070 Identities = 13/18 (72%), Positives = 13/18 (72%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q KNKQE Sbjct: 7427 STRPRGHSSCKQLKNKQE 7374 Score = 25.4 bits (49), Expect(2) = 0.070 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 7513 TARLQPSKDAAP*QPIHRLQWSTRTCGAR 7427 Score = 39.1 bits (79), Expect = 0.081 Identities = 22/43 (51%), Positives = 24/43 (55%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV RL +*PL Sbjct: 470 *NFHLYLAISVLFLLVLACSSIACRTSALVARLTRTTSSR*PL 598 Score = 34.1 bits (68), Expect(2) = 0.22 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 7328 *NFHLYIAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 7456 Score = 27.6 bits (54), Expect(2) = 0.22 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 6685 MMRTSTPSIHPRPPMYNMMVLLPALVHVN*IIR 6783 Score = 29.9 bits (59), Expect(2) = 0.23 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -3 / -1 Query: 874 INLTTRVCFLHANEEQARNQDCNQDIANIREKLY 773 +NL TR L A EEQAR + +IA R K + Sbjct: 570 VNLATRALVLQAIEEQARTSRKSTEIAR*R*KFH 469 Score = 24.9 bits (48), Expect(2) = 0.23 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -2 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V R ALA P+P Sbjct: 677 RLDEDDIHGPTTTVQRRCALATDTPSP 597 Score = 35.4 bits (71), Expect = 1.0 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ P GQVD Sbjct: 469 VKLSSLSSNFSAFSTCSCLFFDCLQDECPCGQVD 570
>LOC_Os06g25790:12006.t02386:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1852 Score = 44.1 bits (90), Expect(3) = 5e-06 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 1001 GPMTRARARELNYQVKSFLANHTSSSQNWVL 1093 Score = 28.1 bits (55), Expect(3) = 5e-06 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +2 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 1640 RLFLARQEQQQRGVGVPVAKAQHP 1711 Score = 23.5 bits (45), Expect(3) = 5e-06 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +1 / +2 Query: 820 FLLVLRLRAGNR 855 FLLVLRL AG+R Sbjct: 1607 FLLVLRLLAGSR 1642
>LOC_Os09g07310:12009.t00527:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 985 Score = 44.1 bits (90), Expect(3) = 5e-06 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 19 GPMTRARARELNYQVKSFLANHTSSSQNWVL 111 Score = 28.1 bits (55), Expect(3) = 5e-06 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 658 RLFLARQEQQQRGVGVPVAKAQHP 729 Score = 21.7 bits (41), Expect(3) = 5e-06 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +2 / +2 Query: 821 SCLFFVCVQ 847 SCLFF C+Q Sbjct: 626 SCLFFDCLQ 652
>LOC_Os09g04840:12009.t00380:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2472 Score = 38.2 bits (77), Expect(2) = 7e-06 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 1742 VKLSSLSSNFSACSTCSCLFFDCLQDECPRGRVD 1843 Score = 37.7 bits (76), Expect(2) = 7e-06 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRA A QLNYQV SF+ + S+ Sbjct: 1157 GPITRAHACQLNYQVSSFLSSYSS 1228 Score = 32.7 bits (65), Expect(3) = 6e-04 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -2 / -2 Query: 872 QPDHEGLFPARKRRTSKKPRLQSGYCEYKRKALLMK 765 QP HEG PA RRTSK + C K K L K Sbjct: 1841 QPGHEGTRPASNRRTSKNK*NKH*NC*IKMKVSLSK 1734 Score = 28.6 bits (56), Expect(3) = 6e-04 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -1 / -2 Query: 975 ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 1943 MKTTFTARLQPSKDAAP*QPIHRLQWSPQTCGAR 1842 Score = 28.1 bits (55), Expect(3) = 6e-04 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -1 / -3 Query: 141 CGCSNGIDVLIT 106 CGC +G+DVLIT Sbjct: 1135 CGCIDGVDVLIT 1100 Score = 32.2 bits (64), Expect(2) = 0.056 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -1 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 1842 STRPRGHSSCKQSKNKQE 1789 Score = 24.9 bits (48), Expect(2) = 0.056 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -1 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V R ALA P+P Sbjct: 1950 RLDEDDIHGPTTTVQRRCALATDTPSP 1870 Score = 33.6 bits (67), Expect(2) = 0.11 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ FLLVLRL AG PSW G* Sbjct: 1735 FDSETFIFI*QFQCLFYLFLLVLRLLAGRVPSWPG* 1842 Score = 27.6 bits (54), Expect(2) = 0.11 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +3 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 VMRTS P +HP +H N*I R Sbjct: 1101 VMRTSTPSIHPHPPKYSMMVLLPALMHVN*IIR 1199 Score = 33.6 bits (67), Expect = 3.7 Identities = 18/33 (54%), Positives = 19/33 (57%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRL 872 *+F L AIS L LACSS ACR LV L Sbjct: 1743 *NFHLYLAISVLVLLVLACSSIACRTSALVAGL 1841
>LOC_Os04g17860:12004.t01533:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4485 Score = 44.1 bits (90), Expect(2) = 9e-06 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 418 GPMTRARARELNYQVKSFLANHTSSSQNWVL 510 Score = 32.2 bits (64), Expect(2) = 9e-06 Identities = 14/18 (77%), Positives = 14/18 (77%) Frame = +1 / +3 Query: 820 FLLVLRLRAGNRPSWSG* 873 FLLVLRL AG PSW G* Sbjct: 4344 FLLVLRLLAGRVPSWPG* 4397 Score = 43.7 bits (89), Expect(2) = 2e-05 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 3709 GPITRARARQLNYQVSSFLSSYSS 3780 Score = 31.8 bits (63), Expect(2) = 2e-05 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +2 / +1 Query: 821 SCLFFVCVQETDPRGQVD 874 SCLFF C+Q+ P G+VD Sbjct: 4345 SCLFFDCLQDECPHGRVD 4398 Score = 31.3 bits (62), Expect(4) = 0.002 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -2 / -2 Query: 1247 TKTSNSTRRCNRKFN 1203 T+TSNST RCNRK + Sbjct: 1418 TRTSNSTNRCNRKLS 1374 Score = 26.7 bits (52), Expect(4) = 0.002 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 / -2 Query: 215 NESTW*FNWRARALVTGPVC 156 N+ T * + RARALV GP C Sbjct: 470 NDFT**LSSRARALVIGPCC 411 Score = 26.3 bits (51), Expect(4) = 0.002 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -1 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 1119 RLSNRYTDSTLLLFLPCQEQP 1057 Score = 24.0 bits (46), Expect(4) = 0.002 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -1 / -3 Query: 1284 NYEQNSKL*RTR 1249 N EQNSKL*RT+ Sbjct: 1456 NREQNSKL*RTK 1421 Score = 28.1 bits (55), Expect(3) = 0.003 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 1057 RLFLARQEQQQRGVGVPVAKAQHP 1128 Score = 25.8 bits (50), Expect(3) = 0.003 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +3 / +2 Query: 957 SSKSTPSKRYPRSHRKTGTTSPLSSGIRFSGCSVR 1061 +S +P++ SHRK G + S CSVR Sbjct: 1154 TSYPSPNRSLSSSHRKIGNPRCCIKWYQSSSCSVR 1258 Score = 23.5 bits (45), Expect(3) = 0.003 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +1 / +1 Query: 820 FLLVLRLRAGNR 855 FLLVLRL AG+R Sbjct: 1024 FLLVLRLLAGSR 1059 Score = 30.4 bits (60), Expect(3) = 0.092 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 4396 QPGHEGTRPASNRRTSK 4346 Score = 28.6 bits (56), Expect(3) = 0.092 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -2 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 3758 ELT**FS*RARARVIGPSCCTWGDVDVSMVLM 3663 Score = 24.0 bits (46), Expect(3) = 0.092 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L GAR Sbjct: 4483 TARLQLSKDAAP*QPIHRLEWSPRTCGAR 4397
>LOC_Os04g17850:12004.t01532:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6278 Score = 44.1 bits (90), Expect(3) = 1e-05 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 418 GPMTRARARELNYQVKSFLANHTSSSQNWVL 510 Score = 28.1 bits (55), Expect(3) = 1e-05 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 1057 RLFLARQEQQQRGVGVPVAKAQHP 1128 Score = 25.8 bits (50), Expect(3) = 1e-05 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +3 / +2 Query: 957 SSKSTPSKRYPRSHRKTGTTSPLSSGIRFSGCSVR 1061 +S +P++ SHRK G + S CSVR Sbjct: 1154 TSYPSPNRSLSSSHRKIGNPRCCIKWYQSSSCSVR 1258 Score = 31.3 bits (62), Expect(4) = 0.006 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -2 / -1 Query: 1247 TKTSNSTRRCNRKFN 1203 T+TSNST RCNRK + Sbjct: 1418 TRTSNSTNRCNRKLS 1374 Score = 26.7 bits (52), Expect(4) = 0.006 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 / -1 Query: 215 NESTW*FNWRARALVTGPVC 156 N+ T * + RARALV GP C Sbjct: 470 NDFT**LSSRARALVIGPCC 411 Score = 26.3 bits (51), Expect(4) = 0.006 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 1119 RLSNRYTDSTLLLFLPCQEQP 1057 Score = 24.0 bits (46), Expect(4) = 0.006 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -1 / -2 Query: 1284 NYEQNSKL*RTR 1249 N EQNSKL*RT+ Sbjct: 1456 NREQNSKL*RTK 1421
>LOC_Os08g20250:12008.t01843:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5496 Score = 43.7 bits (89), Expect(2) = 1e-05 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4742 GPITRARARQLNYQVSSFLSSYSS 4813 Score = 32.2 bits (64), Expect(2) = 1e-05 Identities = 14/18 (77%), Positives = 14/18 (77%) Frame = +1 / +3 Query: 820 FLLVLRLRAGNRPSWSG* 873 FLLVLRL AG PSW G* Sbjct: 5355 FLLVLRLLAGRVPSWPG* 5408 Score = 30.4 bits (60), Expect(3) = 0.23 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -1 / -2 Query: 870 T*PRGSVSCTQTKNKQE 820 T PRG SC Q+KNKQE Sbjct: 5405 TRPRGHSSCKQSKNKQE 5355 Score = 27.2 bits (53), Expect(3) = 0.23 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -1 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+ RARA V GP C +MVLM Sbjct: 4791 ELT**FS*RARARVIGPSCCI*GDVDVSMVLM 4696 Score = 24.4 bits (47), Expect(3) = 0.23 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 5494 TARLQLSKDAAP*QPIHRLQWSPRTCGAR 5408 Score = 31.8 bits (63), Expect(2) = 0.74 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +2 / +1 Query: 821 SCLFFVCVQETDPRGQVD 874 SCLFF C+Q+ PRG+V+ Sbjct: 5356 SCLFFDCLQDECPRGRVN 5409 Score = 27.6 bits (54), Expect(2) = 0.74 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +3 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4686 MMRTSTPSIHPRPLIYSMMVLLPALVHVN*IIR 4784
>LOC_Os03g30270:12003.t02639:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2371 Score = 40.0 bits (81), Expect(3) = 2e-05 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGN 225 GP+ RARARQLNYQV SF+ + Sbjct: 1456 GPIARARARQLNYQVRSFLNS 1518 Score = 28.6 bits (56), Expect(3) = 2e-05 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +2 / +1 Query: 905 SWFSDC*GATSSHVLSRIVKV 967 SW +DC*GATS S+I V Sbjct: 2191 SWCNDC*GATSLDSCSQIANV 2253 Score = 26.3 bits (51), Expect(3) = 2e-05 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +1 / +3 Query: 820 FLLVLRLRAGNRPSWSG*SC 879 FLLVL PSW G*SC Sbjct: 2103 FLLVLDCLQEQIPSWLG*SC 2162 Score = 33.1 bits (66), Expect(3) = 5e-05 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 / -1 Query: 878 HDQPDHEGLFPARKRRTSK 822 HDQP+HEG+ ++ RTSK Sbjct: 2161 HDQPNHEGICSCKQSRTSK 2105 Score = 30.4 bits (60), Expect(3) = 5e-05 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -1 / -2 Query: 207 YLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLIT 106 +L+++L CT W C G+DVLIT Sbjct: 1500 HLIVELTCTSTGNRTMKLYLWRRRCIVGVDVLIT 1399 Score = 29.5 bits (58), Expect(3) = 5e-05 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -1 / -3 Query: 966 TLTIRLRTCEDVAP*QSLNQLR 901 TL I L+ DVAP*QSL+QL+ Sbjct: 2252 TLAI*LQLSRDVAP*QSLHQLQ 2187 Score = 24.9 bits (48), Expect(2) = 8.7 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 / +1 Query: 797 NILIAILVSCLFFVCVQETDPRGQVDRA 880 N++ SC F + + PRG DRA Sbjct: 2080 NLVACSSCSCWFSIACRNKYPRGWADRA 2163 Score = 24.4 bits (47), Expect(2) = 8.7 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 / +2 Query: 903 GVGLAIAKARRPHTFLVGSSKS 968 GVG+ IAKA+ P +V S S Sbjct: 2189 GVGVTIAKAQHPWIVVVRSPMS 2254
>LOC_Os04g17890:12004.t01536:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7858 Score = 44.1 bits (90), Expect(3) = 2e-05 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 418 GPMTRARARELNYQVKSFLANHTSSSQNWVL 510 Score = 28.1 bits (55), Expect(3) = 2e-05 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 1057 RLFLARQEQQQRGVGVPVAKAQHP 1128 Score = 25.8 bits (50), Expect(3) = 2e-05 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +3 / +2 Query: 957 SSKSTPSKRYPRSHRKTGTTSPLSSGIRFSGCSVR 1061 +S +P++ SHRK G + S CSVR Sbjct: 1154 TSYPSPNRSLSSSHRKIGNPRCCIKWYQSSSCSVR 1258 Score = 44.1 bits (90), Expect = 0.002 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 7683 GPMTRARARELNYQVKSFLANHTSSSQNWVL 7775 Score = 31.3 bits (62), Expect(3) = 0.10 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -2 / -3 Query: 1247 TKTSNSTRRCNRKFN 1203 T+TSNST RCNRK + Sbjct: 1418 TRTSNSTNRCNRKLS 1374 Score = 26.7 bits (52), Expect(3) = 0.10 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 / -3 Query: 215 NESTW*FNWRARALVTGPVC 156 N+ T * + RARALV GP C Sbjct: 470 NDFT**LSSRARALVIGPCC 411 Score = 26.3 bits (51), Expect(3) = 0.10 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -2 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 1119 RLSNRYTDSTLLLFLPCQEQP 1057
>LOC_Os11g20060:12011.t01776:unspliced-genomic hypothetical protein| Length = 4085 Score = 33.6 bits (67), Expect(3) = 2e-05 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -1 / +3 Query: 207 YLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLI 109 YL+++L CT W GC G+DVLI Sbjct: 3474 YLIVELMCTSAGNRTMKLYLWRRGCIVGVDVLI 3572 Score = 33.1 bits (66), Expect(3) = 2e-05 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 / +2 Query: 878 HDQPDHEGLFPARKRRTSK 822 HDQP+HEG+ ++ RTSK Sbjct: 2813 HDQPNHEGICSCKQSRTSK 2869 Score = 29.5 bits (58), Expect(3) = 2e-05 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -1 / +1 Query: 966 TLTIRLRTCEDVAP*QSLNQLR 901 TL IRL+ DVAP*QSL+ L+ Sbjct: 2722 TLAIRLQLSRDVAP*QSLH*LQ 2787 Score = 35.9 bits (72), Expect(3) = 0.004 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +1 / -1 Query: 163 GPVTRARARQLNYQVLSFI 219 GP+TRA A QLNYQV SF+ Sbjct: 3518 GPITRACAHQLNYQVRSFL 3462 Score = 26.3 bits (51), Expect(3) = 0.004 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +1 / -3 Query: 820 FLLVLRLRAGNRPSWSG*SC 879 FLLVL PSW G*SC Sbjct: 2871 FLLVLDCLQEQIPSWLG*SC 2812 Score = 25.4 bits (49), Expect(3) = 0.004 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 / -2 Query: 903 GVGLAIAKARRPHTFLVGSSKS 968 GV + IAKA+ P +VGS S Sbjct: 2785 GVSVTIAKAQHPWIVVVGSPTS 2720
>LOC_Os08g22004:12008.t01989:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9908 Score = 44.1 bits (90), Expect(3) = 3e-05 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 3109 GPMTRARARELNYQVKSFLANHTSSSQNWVL 3201 Score = 28.1 bits (55), Expect(3) = 3e-05 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 3748 RLFLARQEQQQRGVGVPVAKAQHP 3819 Score = 25.8 bits (50), Expect(3) = 3e-05 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +3 / +2 Query: 957 SSKSTPSKRYPRSHRKTGTTSPLSSGIRFSGCSVR 1061 +S +P++ SHRK G + S CSVR Sbjct: 3845 TSYPSPNRSLSSSHRKIGNPRCCIKWYQSSSCSVR 3949 Score = 29.5 bits (58), Expect(3) = 0.46 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 / -1 Query: 1259 KELDTKTSNSTRRCNRKFN 1203 K+ +TSNST RCNRK + Sbjct: 4121 KD*TIRTSNSTNRCNRKLS 4065 Score = 26.7 bits (52), Expect(3) = 0.46 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 / -1 Query: 215 NESTW*FNWRARALVTGPVC 156 N+ T * + RARALV GP C Sbjct: 3161 NDFT**LSSRARALVIGPCC 3102 Score = 26.3 bits (51), Expect(3) = 0.46 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 3810 RLSNRYTDSTLLLFLPCQEQP 3748
>LOC_Os02g19870:12002.t01779:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9949 Score = 44.1 bits (90), Expect(3) = 3e-05 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 2262 GPMTRARARELNYQVKSFLANHTSSSQNWVL 2354 Score = 28.1 bits (55), Expect(3) = 3e-05 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +3 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 2901 RLFLARQEQQQRGVGVPVAKAQHP 2972 Score = 25.8 bits (50), Expect(3) = 3e-05 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +3 / +1 Query: 957 SSKSTPSKRYPRSHRKTGTTSPLSSGIRFSGCSVR 1061 +S +P++ SHRK G + S CSVR Sbjct: 2998 TSYPSPNRSLSSSHRKIGNPRCCIKWYQSSSCSVR 3102 Score = 44.1 bits (90), Expect(2) = 2e-04 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 8948 GPMTRARARELNYQVKSFLANHTSSSQNWVL 9040 Score = 29.0 bits (57), Expect(2) = 2e-04 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +3 / +2 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+++AKA+ P Sbjct: 9587 RLFLARQEQQQRGVGVSVAKAQHP 9658 Score = 32.2 bits (64), Expect(3) = 0.086 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 / -1 Query: 1259 KELDTKTSNSTRRCNRKFN 1203 K+ T+TSNST RCNRK + Sbjct: 3274 KD*TTRTSNSTNRCNRKLS 3218 Score = 26.7 bits (52), Expect(3) = 0.086 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 / -1 Query: 215 NESTW*FNWRARALVTGPVC 156 N+ T * + RARALV GP C Sbjct: 2314 NDFT**LSSRARALVIGPCC 2255 Score = 26.3 bits (51), Expect(3) = 0.086 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 2963 RLSNRYTDSTLLLFLPCQEQP 2901
>LOC_Os03g40820:12003.t03504:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2590 Score = 45.5 bits (93), Expect(2) = 3e-05 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GPVTRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 1129 GPVTRARARELNYQVKSFLANHTSSSQNWVL 1221 Score = 28.1 bits (55), Expect(2) = 3e-05 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 1768 RLFLARQEQQQRGVGVPVAKAQHP 1839
>LOC_Os04g17940:12004.t01541:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4963 Score = 44.1 bits (90), Expect(3) = 3e-05 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 4135 GPMTRARARELNYQVKSFLANHTSSSQNWVL 4227 Score = 28.1 bits (55), Expect(3) = 3e-05 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 4774 RLFLARQEQQQRGVGVPVAKAQHP 4845 Score = 23.5 bits (45), Expect(3) = 3e-05 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +1 / +1 Query: 820 FLLVLRLRAGNR 855 FLLVLRL AG+R Sbjct: 4741 FLLVLRLLAGSR 4776 Score = 38.2 bits (77), Expect = 0.15 Identities = 15/29 (51%), Positives = 23/29 (79%) Frame = +1 / +1 Query: 169 VTRARARQLNYQVLSFIGNTSNVHEHMML 255 +TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 1 MTRARARELNYQVKSFLANHTSSSQNWVL 87
>LOC_Os01g29910:12001.t02673:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10194 Score = 44.1 bits (90), Expect(3) = 5e-05 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 4975 GPMTRARARELNYQVKSFLANHTSSSQNWVL 5067 Score = 28.1 bits (55), Expect(3) = 5e-05 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 5614 RLFLARQEQQQRGVGVPVAKAQHP 5685 Score = 24.9 bits (48), Expect(3) = 5e-05 Identities = 12/34 (35%), Positives = 15/34 (44%) Frame = +3 / +2 Query: 960 SKSTPSKRYPRSHRKTGTTSPLSSGIRFSGCSVR 1061 S +P++ SHRK G S CSVR Sbjct: 5714 SYPSPNRSLSSSHRKIGNPRCCIKWYESSSCSVR 5815 Score = 42.3 bits (86), Expect(2) = 0.001 Identities = 16/31 (51%), Positives = 25/31 (80%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRA+AR+LNYQV SF+ N ++ ++ +L Sbjct: 9266 GPMTRAQARELNYQVKSFLANHTSSSQNWVL 9358 Score = 28.1 bits (55), Expect(2) = 0.001 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +2 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 9905 RLFLARQEQQQRGVGVPVAKAQHP 9976 Score = 40.9 bits (83), Expect = 0.023 Identities = 21/53 (39%), Positives = 27/53 (50%) Frame = -1 / +3 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *+QQLD TM +IQ SK + C G+ W G Sbjct: 315 DTVAATTVVQNVTRTRNSKRTRR*NQQLDVTMQHKIQQSKN*REQCNGTIWLG 473 Score = 40.5 bits (82), Expect = 0.031 Identities = 19/32 (59%), Positives = 22/32 (68%) Frame = -2 / +1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTS+ST RCN KFN A ++ A AQ G Sbjct: 373 ELDAKTSSST*RCNTKFNKAKTEENNAMAQYG 468 Score = 32.2 bits (64), Expect(3) = 0.090 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 / -2 Query: 1259 KELDTKTSNSTRRCNRKFN 1203 K+ T+TSNST RCNRK + Sbjct: 5987 KD*TTRTSNSTNRCNRKLS 5931 Score = 26.7 bits (52), Expect(3) = 0.090 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 / -2 Query: 215 NESTW*FNWRARALVTGPVC 156 N+ T * + RARALV GP C Sbjct: 5027 NDFT**LSSRARALVIGPCC 4968 Score = 26.3 bits (51), Expect(3) = 0.090 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -1 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 5676 RLSNRYTDSTLLLFLPCQEQP 5614 Score = 29.9 bits (59), Expect(2) = 1.3 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 / -1 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ C VEF V SS R AG Sbjct: 453 CIVLFSFCFVEFCVASSRRAAG 388 Score = 22.1 bits (42), Expect(2) = 1.3 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +1 / -2 Query: 997 IERQGQLRLYQVVSDFQVAR* 1059 +E + +LR+ QVVS+ VAR* Sbjct: 590 LECREELRVLQVVSETFVAR* 528 Score = 35.0 bits (70), Expect = 1.4 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -3 / +2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 +PA R DD T NSTKQ ++ MQ + R Sbjct: 386 KPAARRDDATQNSTKQKLKRTMQWHNMAR 472
>LOC_Os04g39730:12004.t03540:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5989 Score = 37.7 bits (76), Expect(2) = 7e-05 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 5322 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 5423 Score = 35.9 bits (72), Expect(2) = 7e-05 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARA LNYQV SF+ + S+ Sbjct: 4735 GPITRARAC*LNYQVSSFLSSYSS 4806 Score = 32.2 bits (64), Expect(2) = 0.006 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -1 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 5422 STRPRGHSSCKQSKNKQE 5369 Score = 28.1 bits (55), Expect(2) = 0.006 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -2 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 5526 *MKTTFTARLQLSKDAAP*QPIHRLQWSPRTCGAR 5422 Score = 35.4 bits (71), Expect(2) = 0.074 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 5315 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 5422 Score = 27.6 bits (54), Expect(2) = 0.074 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN*ITR 205 +MRTS P +HP VH N*I R Sbjct: 4679 MMRTSTPSIHPRPPMYSMMVLLPALVHVN*IIR 4777 Score = 30.4 bits (60), Expect(2) = 0.24 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -2 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 5421 QPGHEGTRPASNRRTSK 5371 Score = 24.4 bits (47), Expect(2) = 0.24 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -1 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD D PT V R ALA P+P Sbjct: 5530 RLDEDDVHGPTTTVQRRCALATDTPSP 5450 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 5323 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 5451
>LOC_Os02g27380:12002.t02432:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7837 Score = 43.2 bits (88), Expect(3) = 7e-05 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 163 GPMTRARARELNYQVKSFLANHTSSCQNWVL 255 Score = 26.7 bits (52), Expect(3) = 7e-05 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 802 RLFLARQEQQ*RGVGVPVAKAQHP 873 Score = 25.8 bits (50), Expect(3) = 7e-05 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +3 / +2 Query: 957 SSKSTPSKRYPRSHRKTGTTSPLSSGIRFSGCSVR 1061 +S +P++ SHRK G + S CSVR Sbjct: 899 TSYPSPNRSLSSSHRKIGNPRCCIKWYQSSSCSVR 1003 Score = 44.1 bits (90), Expect(2) = 2e-04 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 6849 GPMTRARARELNYQVKSFLANHTSSSQNWVL 6941 Score = 28.1 bits (55), Expect(2) = 2e-04 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +3 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 7488 RLFLARQEQQQRGVGVPVAKAQHP 7559 Score = 32.2 bits (64), Expect(3) = 0.058 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 / -3 Query: 1259 KELDTKTSNSTRRCNRKFN 1203 K+ T+TSNST RCNRK + Sbjct: 1175 KD*TTRTSNSTNRCNRKLS 1119 Score = 26.7 bits (52), Expect(3) = 0.058 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 / -3 Query: 215 NESTW*FNWRARALVTGPVC 156 N+ T * + RARALV GP C Sbjct: 215 NDFT**LSSRARALVIGPCC 156 Score = 26.3 bits (51), Expect(3) = 0.058 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -2 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 864 RLSNRYTDSTLLLFLPCQEQP 802
>LOC_Os11g24790:12011.t02099:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 1800 Score = 27.6 bits (54), Expect(4) = 7e-05 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 1003 RLFLSRQEQQQRGVGVPVAKAQHP 1074 Score = 24.4 bits (47), Expect(4) = 7e-05 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +3 / +3 Query: 822 LACSSFACRKQTLVV 866 LACSS ACR + ++V Sbjct: 972 LACSSIACRFKVVLV 1016 Score = 24.4 bits (47), Expect(4) = 7e-05 Identities = 11/30 (36%), Positives = 14/30 (46%) Frame = +3 / +2 Query: 972 PSKRYPRSHRKTGTTSPLSSGIRFSGCSVR 1061 P++ SHRK G + S CSVR Sbjct: 1115 PNRSLSTSHRKIGNPRCCIKWYQSSSCSVR 1204 Score = 22.6 bits (43), Expect(4) = 7e-05 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +1 / +1 Query: 670 LGFCLDFKFAIAATSRS 720 LGFCLD A A + S Sbjct: 814 LGFCLDVSLAAATSMYS 864 Score = 29.5 bits (58), Expect(2) = 3.0 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 / -3 Query: 1259 KELDTKTSNSTRRCNRKFN 1203 K+ T+TSN T RCNRK + Sbjct: 1375 KD*TTRTSNLTNRCNRKLS 1319 Score = 26.3 bits (51), Expect(2) = 3.0 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -1 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 1065 RLSNRYTDSTLLLFLP*QEQP 1003
>LOC_Os07g22310:12007.t01935:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 7305 Score = 43.2 bits (88), Expect(2) = 9e-05 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 2705 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 2610 Score = 23.5 bits (45), Expect(2) = 9e-05 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = -2 / -1 Query: 1301 AVTA*QTMNRTRNSK 1257 A T Q M RTRNSK Sbjct: 2751 ATTVVQNMTRTRNSK 2707 Score = 40.9 bits (83), Expect = 0.023 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -1 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 2763 DTVAATTVVQNMTRTRNSKRTRR*DQQHDVTMQHKIQQSKD*KEQCNGTIWLG 2605 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 2692 RPATRRDDATQNSTKQRLKRTMQWHNMAR 2606 Score = 32.7 bits (65), Expect = 6.9 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 / +3 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ +C VEF V SS RVAG Sbjct: 2625 CIVLFSLCFVEFCVASSRRVAG 2690
>LOC_Os01g28130:12001.t02512:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6180 Score = 43.2 bits (88), Expect(2) = 9e-05 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 4612 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 4517 Score = 43.2 bits (88), Expect(2) = 9e-05 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 968 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 873 Score = 23.5 bits (45), Expect(2) = 9e-05 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -2 / -2 Query: 1301 AVTA*QTMNRTRNSK 1257 A TA Q + RTRNSK Sbjct: 4658 ATTAVQNVTRTRNSK 4614 Score = 23.5 bits (45), Expect(2) = 9e-05 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -2 / -1 Query: 1301 AVTA*QTMNRTRNSK 1257 A TA Q + RTRNSK Sbjct: 1014 ATTAVQNVTRTRNSK 970 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 2791 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 2696 Score = 42.8 bits (87), Expect = 0.006 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -2 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 4670 DTVAATTAVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 4512 Score = 42.8 bits (87), Expect = 0.006 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -2 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 2849 DTVAAMTAVQNVTRTRNTKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 2691 Score = 42.8 bits (87), Expect = 0.006 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -1 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1026 DTVAATTAVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 868 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 4599 RPATRRDDATQNSTKQKLKRTMQWHNMAR 4513 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 2778 RPATRRDDATQNSTKQKLKRTMQWHNMAR 2692 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 955 RPATRRDDATQNSTKQKLKRTMQWHNMAR 869
>LOC_Os06g20280:12006.t01845:unspliced-genomic transposon protein, putative, Pong sub-class| Length = 6025 Score = 33.6 bits (67), Expect(2) = 9e-05 Identities = 15/22 (68%), Positives = 18/22 (81%) Frame = -1 / -1 Query: 966 TLTIRLRTCEDVAP*QSLNQLR 901 TL IRL+ DVAP*QSL+QL+ Sbjct: 679 TLVIRLQLSRDVAP*QSLHQLQ 614 Score = 33.1 bits (66), Expect(2) = 9e-05 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 / -2 Query: 878 HDQPDHEGLFPARKRRTSK 822 HDQP+HEG+ ++ RTSK Sbjct: 588 HDQPNHEGICSCKQSRTSK 532 Score = 30.4 bits (60), Expect(3) = 0.001 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 / +3 Query: 905 SWFSDC*GATSSHVLSRIVKV 967 SW +DC*GATS SRI V Sbjct: 618 SWCNDC*GATSLDSCSRITNV 680 Score = 26.3 bits (51), Expect(3) = 0.001 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +1 / +2 Query: 820 FLLVLRLRAGNRPSWSG*SC 879 FLLVL PSW G*SC Sbjct: 530 FLLVLDCLQEQIPSWLG*SC 589 Score = 22.1 bits (42), Expect(3) = 0.001 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +1 / +3 Query: 979 NDIHDLIERQGQLRLYQV 1032 N + LIER G R YQ+ Sbjct: 690 NRLIPLIERSGHPRAYQI 743
>LOC_Os01g15934:12001.t01444:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4579 Score = 43.2 bits (88), Expect(2) = 9e-05 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 1216 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 1121 Score = 23.5 bits (45), Expect(2) = 9e-05 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = -2 / -3 Query: 1301 AVTA*QTMNRTRNSK 1257 A T Q M RTRNSK Sbjct: 1262 ATTVVQNMTRTRNSK 1218 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -3 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1274 DTVAATTVVQNMTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 1116 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 1203 RPATRRDDATQNSTKQKLKRTMQWHNMAR 1117 Score = 31.8 bits (63), Expect(2) = 9.0 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +3 / +2 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ C VEF V SS RVAG Sbjct: 1136 CIVLFSFCFVEFCVASSRRVAG 1201 Score = 23.5 bits (45), Expect(2) = 9.0 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 / +3 Query: 670 LGFCLDFKFAIAAT 711 LGFCLD AIA + Sbjct: 663 LGFCLDESLAIATS 704
>LOC_Os08g19060:12008.t01727:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2910 Score = 34.1 bits (68), Expect(2) = 1e-04 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = -1 / -3 Query: 966 TLTIRLRTCEDVAP*QSLNQLRE 898 TL IRL+ DVAP*QSL+QL++ Sbjct: 679 TLVIRLQLSRDVAP*QSLHQLQK 611 Score = 32.7 bits (65), Expect(2) = 1e-04 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 / -1 Query: 878 HDQPDHEGLFPARKRRTSK 822 HDQP+HEG+ ++ RTSK Sbjct: 588 HDQPNHEGICSCKQLRTSK 532 Score = 30.4 bits (60), Expect(2) = 0.041 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 / +3 Query: 905 SWFSDC*GATSSHVLSRIVKV 967 SW +DC*GATS SRI V Sbjct: 618 SWCNDC*GATSLDSCSRITNV 680 Score = 27.2 bits (53), Expect(2) = 0.041 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +1 / +2 Query: 820 FLLVLRLRAGNRPSWSG*SC 879 FLLVL PSW G*SC Sbjct: 530 FLLVLNCLQEQIPSWLG*SC 589 Score = 27.2 bits (53), Expect(2) = 6.4 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +3 / +1 Query: 903 GVGLAIAKARRPHTFLVGS 959 GVG+ IAKA+ P +VGS Sbjct: 616 GVGVTIAKAQHPWIVVVGS 672 Score = 22.6 bits (43), Expect(2) = 6.4 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +2 / +3 Query: 821 SCLFFVCVQETDPRGQVDRA 880 SC F + + PRG DRA Sbjct: 531 SC*FSIACRNKYPRGWADRA 590
>LOC_Os01g31200:12001.t02704:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2766 Score = 44.1 bits (90), Expect(3) = 1e-04 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 1561 GPMTRARARELNYQVKSFLANHTSSSQNWVL 1653 Score = 24.4 bits (47), Expect(3) = 1e-04 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 / +2 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA P Sbjct: 2201 RLFLARQEQQ*RGVGVPVAKA*HP 2272 Score = 23.5 bits (45), Expect(3) = 1e-04 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +1 / +2 Query: 820 FLLVLRLRAGNR 855 FLLVLRL AG+R Sbjct: 2168 FLLVLRLLAGSR 2203
>LOC_Os01g29488:12001.t02637:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7915 Score = 43.2 bits (88), Expect(2) = 1e-04 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 2045 ELDAKTSNTT*RCNAKFNKAKTEKNNAMAQYG 1950 Score = 23.1 bits (44), Expect(2) = 1e-04 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -2 / -2 Query: 1301 AVTA*QTMNRTRNSK 1257 A+T Q + RTRNSK Sbjct: 2091 AITVEQNVTRTRNSK 2047 Score = 39.6 bits (80), Expect = 0.059 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = -1 / -2 Query: 1254 TRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFGYDDLNLIYIF 1126 TR *DQQ D TM +IQ SK K C G+ W G ++++F Sbjct: 2043 TRR*DQQHDVTMQRKIQQSKN*KEQCNGTIWLGK**KKIVWLF 1915 Score = 39.1 bits (79), Expect = 0.081 Identities = 20/45 (44%), Positives = 25/45 (55%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVRI**SKPNIYFFGCFVD 1109 RPATR DD T NSTKQ ++ MQ + R K + F +VD Sbjct: 2032 RPATRRDDATQNSTKQKLKRTMQWHNMAR*MIKKNCMAIFWLWVD 1898
>LOC_Os10g20440:12010.t01537:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5719 Score = 44.1 bits (90), Expect(2) = 2e-04 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 4813 GPMTRARARELNYQVKSFLANHTSSSQNWVL 4905 Score = 28.1 bits (55), Expect(2) = 2e-04 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 5452 RLFLARQEQQQRGVGVPVAKAQHP 5523
>LOC_Os04g18360:12004.t01579:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5488 Score = 43.2 bits (88), Expect(2) = 2e-04 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 3233 ELDAKTSNTT*RCNTKFNKAKTEKNNATAQYG 3138 Score = 22.6 bits (43), Expect(2) = 2e-04 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -2 / -2 Query: 1301 AVTA*QTMNRTRNSK 1257 A+T Q ++RTRNSK Sbjct: 3279 AMTVVQNVSRTRNSK 3235 Score = 39.6 bits (80), Expect = 0.059 Identities = 20/45 (44%), Positives = 24/45 (53%) Frame = -1 / -2 Query: 1290 VTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 V N + RTR *D+Q D TM +IQ SK K C G+ W G Sbjct: 3267 VQNVSRTRNSKRTRR*DKQHDVTMQHKIQQSKN*KEQCNGTIWLG 3133 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 R ATR DD T NSTKQ ++ MQR + R Sbjct: 3220 RQATRRDDATQNSTKQKLKRTMQRHNMAR 3134
>LOC_Os12g19549:12012.t01798:unspliced-genomic telomerase reverse transcriptase, putative, expressed| Length = 16154 Score = 39.1 bits (79), Expect(3) = 2e-04 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 / +1 Query: 207 YLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLI 109 +L++ L CT W CGC+ G+DVLI Sbjct: 5017 HLIVDLTCTSTGNRTMKLDLWRCGCTEGVDVLI 5115 Score = 29.5 bits (58), Expect(3) = 2e-04 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -1 / +2 Query: 966 TLTIRLRTCEDVAP*QSLNQLR 901 TL I L+ DVAP*QSL+QL+ Sbjct: 4337 TLAI*LQLSRDVAP*QSLHQLQ 4402 Score = 27.6 bits (54), Expect(3) = 2e-04 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = -2 / +3 Query: 878 HDQPDHEGLFPARKRRTSK 822 H QP+H+G+ + RTSK Sbjct: 4419 HSQPNHKGICSCKHSRTSK 4475 Score = 38.6 bits (78), Expect(2) = 0.012 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = +1 / -3 Query: 166 PVTRARARQLNYQVLSFIGNTSN 234 P+TRARARQ+NYQV SF+ S+ Sbjct: 5058 PITRARARQVNYQVSSFLSPCSS 4990 Score = 28.6 bits (56), Expect(2) = 0.012 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +2 / -3 Query: 905 SWFSDC*GATSSHVLSRIVKV 967 SW +DC*GATS S+I V Sbjct: 4398 SWCNDC*GATSLDSCSQIANV 4336
>LOC_Os07g20730:12007.t01877:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7143 Score = 44.1 bits (90), Expect(2) = 2e-04 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 3455 GPMTRARARELNYQVKSFLANHTSSSQNWVL 3547 Score = 28.1 bits (55), Expect(2) = 2e-04 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +2 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 4094 RLFLARQEQQQRGVGVPVAKAQHP 4165 Score = 33.6 bits (67), Expect(3) = 0.021 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -2 / -1 Query: 1259 KELDTKTSNSTRRCNRKFN 1203 KE T+TSNST RCNRK + Sbjct: 4467 KE*TTRTSNSTNRCNRKLS 4411 Score = 26.7 bits (52), Expect(3) = 0.021 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 / -1 Query: 215 NESTW*FNWRARALVTGPVC 156 N+ T * + RARALV GP C Sbjct: 3507 NDFT**LSSRARALVIGPCC 3448 Score = 26.3 bits (51), Expect(3) = 0.021 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 4156 RLSNRYTDSTLLLFLPCQEQP 4094
>LOC_Os04g12864:12004.t01109:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3694 Score = 41.4 bits (84), Expect(2) = 3e-04 Identities = 19/32 (59%), Positives = 22/32 (68%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T +CN KFN A K+ A AQ G Sbjct: 969 ELDAKTSNTT*QCNTKFNKAKTEKNNAMAQYG 874 Score = 23.5 bits (45), Expect(2) = 3e-04 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = -2 / -1 Query: 1301 AVTA*QTMNRTRNSK 1257 A T Q M RTRNSK Sbjct: 1015 ATTVVQNMTRTRNSK 971 Score = 40.9 bits (83), Expect = 0.023 Identities = 21/45 (46%), Positives = 24/45 (53%) Frame = -1 / -1 Query: 1290 VTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1003 VQNMTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 869 Score = 36.3 bits (73), Expect = 0.54 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR D+ T NSTKQ ++ MQ + R Sbjct: 956 RPATRRDNATQNSTKQKLKRTMQWHNMAR 870
>LOC_Os02g23821:12002.t02071:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4425 Score = 40.0 bits (81), Expect(3) = 4e-04 Identities = 16/31 (51%), Positives = 24/31 (77%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNY V SF+ N ++ ++ +L Sbjct: 3316 GPMTRARARELNY*VKSFLANHTSSSQNWVL 3408 Score = 28.1 bits (55), Expect(3) = 4e-04 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 3955 RLFLARQEQQQRGVGVPVAKAQHP 4026 Score = 23.5 bits (45), Expect(3) = 4e-04 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +1 / +1 Query: 820 FLLVLRLRAGNR 855 FLLVLRL AG+R Sbjct: 3922 FLLVLRLLAGSR 3957
>LOC_Os04g14830:12004.t01300:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5772 Score = 42.8 bits (87), Expect(2) = 4e-04 Identities = 16/31 (51%), Positives = 25/31 (80%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+T+ARAR+LNYQV SF+ N ++ ++ +L Sbjct: 4814 GPMTKARARELNYQVKSFLANHTSSSQNWVL 4906 Score = 28.1 bits (55), Expect(2) = 4e-04 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +2 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 5453 RLFLARQEQQQRGVGVPVAKAQHP 5524
>LOC_Os10g20960:12010.t01588:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7631 Score = 41.8 bits (85), Expect(2) = 0.001 Identities = 16/31 (51%), Positives = 24/31 (77%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV F+ N ++ ++ +L Sbjct: 19 GPMTRARARELNYQVKPFLANHTSSSQNWVL 111 Score = 28.1 bits (55), Expect(2) = 0.001 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +2 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 7409 RLFMARQEQQQRGVGVPVAKAQHP 7480 Score = 38.6 bits (78), Expect = 0.11 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGN 225 GP+TRARAR+LNYQV F+ N Sbjct: 6779 GPMTRARARELNYQVK*FLAN 6841 Score = 30.9 bits (61), Expect(3) = 0.40 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 / -3 Query: 1259 KELDTKTSNSTRRCNRKFN 1203 K+ T+T+NST RCNRK + Sbjct: 1023 KD*TTRTNNSTNRCNRKLS 967 Score = 26.3 bits (51), Expect(3) = 0.40 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 714 RLSNRYTDSTLLLFLPCQEQP 652 Score = 24.9 bits (48), Expect(3) = 0.40 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -2 / -1 Query: 215 NESTW*FNWRARALVTGPVC 156 N T * + RARALV GP C Sbjct: 71 NGFT**LSSRARALVIGPCC 12
>LOC_Os11g18500:12011.t01621:unspliced-genomic hypothetical protein| Length = 2858 Score = 34.1 bits (68), Expect(4) = 0.002 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFI 219 GP+T ARARQLN +V SF+ Sbjct: 870 GPITSARARQLNLEVSSFL 926 Score = 25.4 bits (49), Expect(4) = 0.002 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +1 / +3 Query: 643 YTALRAPFRLGFCLDFKFAIAATSRSL 723 Y L + GFCLD+ + T+RS+ Sbjct: 1380 YQYLSSSLGFGFCLDYSVENSFTARSV 1460 Score = 24.4 bits (47), Expect(4) = 0.002 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +2 / +3 Query: 1097 FIPIVHETAKKIYIRFRSSYPNQSEPLHNLFSSL 1198 FI E KK + PN+ PLHN F SL Sbjct: 1812 FILESKEKPKKKVVVVSVLNPNRVWPLHNPFQSL 1913 Score = 23.1 bits (44), Expect(4) = 0.002 Identities = 7/30 (23%), Positives = 17/30 (56%) Frame = +1 / +3 Query: 1291 AVTASYFIIYHHHATIILAAIYHHHATIIL 1380 ++T ++I+YH H + ++ Y+ +L Sbjct: 2496 SITICHWIVYHSHIFSLPSSTYYFWTAHVL 2585
>LOC_Os04g13180:12004.t01139:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10673 Score = 44.1 bits (90), Expect = 0.002 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 9697 GPMTRARARELNYQVKSFLANHTSSSQNWVL 9789 Score = 31.8 bits (63), Expect(2) = 0.12 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 / -1 Query: 1259 KELDTKTSNSTRRCNRKFN 1203 K+ T+TSNST RCNRK + Sbjct: 3974 KD*TTRTSNSTSRCNRKLS 3918 Score = 24.0 bits (46), Expect(2) = 0.12 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -1 / -2 Query: 1284 NYEQNSKL*RTR 1249 N EQNSKL*RT+ Sbjct: 4000 NREQNSKL*RTK 3965 Score = 28.1 bits (55), Expect(2) = 1.8 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 3601 RLFLARQEQQQRGVGVPVAKAQHP 3672 Score = 23.5 bits (45), Expect(2) = 1.8 Identities = 11/30 (36%), Positives = 14/30 (46%) Frame = +3 / +2 Query: 972 PSKRYPRSHRKTGTTSPLSSGIRFSGCSVR 1061 P++ SHRK G + S CSVR Sbjct: 3713 PNRSLTSSHRKIGNPRCCIK*YQSSSCSVR 3802
>LOC_Os08g21690:12008.t01959:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6265 Score = 44.1 bits (90), Expect = 0.002 Identities = 17/31 (54%), Positives = 25/31 (80%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 4814 GPMTRARARELNYQVKSFLANHTSSSQNWVL 4906
>LOC_Os11g23060:12011.t01976:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9324 Score = 43.7 bits (89), Expect = 0.003 Identities = 20/32 (62%), Positives = 21/32 (65%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD TSNSTRRCN K N A K+ A AQ G Sbjct: 6025 ELDANTSNSTRRCNTKLNKAKTDKNNAMAQYG 5930 Score = 38.2 bits (77), Expect = 0.15 Identities = 20/45 (44%), Positives = 25/45 (55%) Frame = -1 / -2 Query: 1290 VTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 V N + RTR * QQLD+TM* + Q SK + C G+ W G Sbjct: 6059 VQNVTRTRNSTRTRR*HQQLDSTM*HKTQQSKN**KQCNGTIWLG 5925 Score = 37.7 bits (76), Expect = 0.21 Identities = 15/22 (68%), Positives = 16/22 (72%) Frame = +3 / +2 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+F C VEF VTSS RVAG Sbjct: 5945 CIVFISFCFVEFCVTSSSRVAG 6010 Score = 36.3 bits (73), Expect = 0.54 Identities = 17/28 (60%), Positives = 18/28 (64%) Frame = -3 / -1 Query: 1240 PATRHDDVTANSTKQTTEKIMQRLRLVR 1157 PATR DDVT NSTKQ K MQ + R Sbjct: 6009 PATRLDDVTQNSTKQKLIKTMQWHNMAR 5926
>LOC_Os05g20970:12005.t01858:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 7045 Score = 43.7 bits (89), Expect = 0.003 Identities = 20/32 (62%), Positives = 21/32 (65%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD TSNSTRRCN K N A K+ A AQ G Sbjct: 3824 ELDANTSNSTRRCNTKLNKAKTDKNNAMAQYG 3729 Score = 38.2 bits (77), Expect = 0.15 Identities = 20/45 (44%), Positives = 25/45 (55%) Frame = -1 / -2 Query: 1290 VTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 V N + RTR * QQLD+TM* + Q SK + C G+ W G Sbjct: 3858 VQNVTRTRNSKRTRR*HQQLDSTM*HKTQQSKN**KQCNGTIWLG 3724 Score = 37.7 bits (76), Expect = 0.21 Identities = 15/22 (68%), Positives = 16/22 (72%) Frame = +3 / +3 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+F C VEF VTSS RVAG Sbjct: 3744 CIVFISFCFVEFCVTSSSRVAG 3809 Score = 36.3 bits (73), Expect = 0.54 Identities = 17/28 (60%), Positives = 18/28 (64%) Frame = -3 / -1 Query: 1240 PATRHDDVTANSTKQTTEKIMQRLRLVR 1157 PATR DDVT NSTKQ K MQ + R Sbjct: 3808 PATRLDDVTQNSTKQKLIKTMQWHNMAR 3725
>LOC_Os08g22420:12008.t02021:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4923 Score = 43.7 bits (89), Expect = 0.003 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 4735 GPITRARARQLNYQVSSFLSSYSS 4806
>LOC_Os01g33204:12001.t02891:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4275 Score = 43.7 bits (89), Expect = 0.003 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRARARQLNYQV SF+ + S+ Sbjct: 3668 GPITRARARQLNYQVSSFLSSYSS 3739
>LOC_Os07g20720:12007.t01876:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 15138 Score = 40.9 bits (83), Expect(2) = 0.003 Identities = 16/31 (51%), Positives = 24/31 (77%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRA AR+LNYQV SF+ N ++ ++ +L Sbjct: 6016 GPMTRALARELNYQVKSFLANHTSSSQNWVL 6108 Score = 28.1 bits (55), Expect(2) = 0.003 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +1 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 6655 RLFLARQEQQQRGVGVPVAKAQHP 6726
>LOC_Os03g36130:12003.t03087:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4806 Score = 39.1 bits (79), Expect(2) = 0.004 Identities = 17/30 (56%), Positives = 20/30 (66%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQ 1167 ELD TSN+TR+CN K N K+ AKAQ Sbjct: 1656 ELDANTSNTTRQCNTKLNNVKTEKNNAKAQ 1567 Score = 22.1 bits (42), Expect(2) = 0.004 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -2 / -3 Query: 1301 AVTA*QTMNRTRNSK 1257 A+T Q + RTRNSK Sbjct: 1702 AMTVVQNVTRTRNSK 1658
>LOC_Os10g09270:12010.t00744:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3422 Score = 39.1 bits (79), Expect(2) = 0.004 Identities = 19/31 (61%), Positives = 20/31 (64%) Frame = -2 / -2 Query: 1253 LDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 LDTKTSN RRCN K N A K+ A AQ G Sbjct: 1657 LDTKTSNLIRRCNAKHNKAKTDKNNAIAQYG 1565 Score = 22.1 bits (42), Expect(2) = 0.004 Identities = 6/9 (66%), Positives = 8/9 (88%) Frame = -2 / -2 Query: 1136 YIFFWLFRG 1110 +I+FWLF G Sbjct: 1549 FIYFWLFSG 1523 Score = 37.3 bits (75), Expect(2) = 0.018 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = -1 / -1 Query: 1290 VTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 V N + RTRH*+QQLD+TM* + Q K C + W G Sbjct: 1694 VQNVTRTRNSKRTRH*NQQLDSTM*RKTQQGKN**EQCNSTIWLG 1560 Score = 27.2 bits (53), Expect(2) = 0.018 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -3 / -1 Query: 970 VDFDDPTKNV*GRRALAIAKPTPRGY*SRRSTINLTTRVC 851 +D P G+R LA + + Y R++T++LTT C Sbjct: 356 LDIPHPVPTEVGKRDLAPSLISTSSYSRRKTTLSLTTSWC 237 Score = 31.8 bits (63), Expect(2) = 7.0 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +3 / +2 Query: 1167 LSLCIIFSVVCLVEFAVTSSCRVAG 1241 L CI+ CLV F VTSS +VAG Sbjct: 1571 LCYCIVLISFCLVVFCVTSSNQVAG 1645 Score = 23.5 bits (45), Expect(2) = 7.0 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +1 / +2 Query: 670 LGFCLDFKFAIAATSRS 720 LGFCLD AIA +S Sbjct: 1109 LGFCLDESLAIATFLQS 1159
>LOC_Os06g21250:12006.t01942:unspliced-genomic glycine-rich cell wall structural protein precursor, putative,| expressed Length = 1240 Score = 36.3 bits (73), Expect(2) = 0.004 Identities = 7/16 (43%), Positives = 13/16 (81%) Frame = -2 / +3 Query: 1364 WWWYMAARIMVAWWWY 1317 WWW+++ R ++ WWW+ Sbjct: 918 WWWWLSRRWILWWWWW 965 Score = 24.9 bits (48), Expect(2) = 0.004 Identities = 7/15 (46%), Positives = 7/15 (46%) Frame = -2 / +3 Query: 1403 IWWWYMAARIMVAWW 1359 IWWW I WW Sbjct: 807 IWWWRRRWWIWRIWW 851 Score = 38.2 bits (77), Expect = 0.15 Identities = 8/17 (47%), Positives = 14/17 (82%) Frame = -2 / +3 Query: 1403 IWWWYMAARIMVAWWWY 1353 IWWW+++ R ++ WWW+ Sbjct: 915 IWWWWLSRRWILWWWWW 965
>LOC_Os09g04580:12009.t00354:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4325 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 969 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 874 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -2 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1027 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 869 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 956 RPATRRDDATQNSTKQKLKRTMQWHNMAR 870
>LOC_Os09g04460:12009.t00342:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 8268 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 4902 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 4807 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 1126 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 1031 Score = 40.9 bits (83), Expect = 0.023 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -3 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 4960 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKD*KEQCNGTIWLG 4802 Score = 40.9 bits (83), Expect = 0.023 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -2 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1184 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKD*KEQCNGTIWLG 1026 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 4889 RPATRRDDATQNSTKQRLKRTMQWHNMAR 4803 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 1113 RPATRRDDATQNSTKQRLKRTMQWHNMAR 1027 Score = 32.7 bits (65), Expect = 6.9 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 / +2 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ +C VEF V SS RVAG Sbjct: 1046 CIVLFSLCFVEFCVASSRRVAG 1111 Score = 32.7 bits (65), Expect = 6.9 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 / +1 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ +C VEF V SS RVAG Sbjct: 4822 CIVLFSLCFVEFCVASSRRVAG 4887
>LOC_Os07g20910:12007.t01894:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4221 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 968 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 873 Score = 40.9 bits (83), Expect = 0.023 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -1 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1026 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKD*KEQCNGTIWLG 868 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 955 RPATRRDDATQNSTKQRLKRTMQWHNMAR 869 Score = 32.7 bits (65), Expect = 6.9 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 / +3 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ +C VEF V SS RVAG Sbjct: 888 CIVLFSLCFVEFCVASSRRVAG 953
>LOC_Os07g20890:12007.t01892:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 6395 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 968 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 873 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -3 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1026 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 868 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 955 RPATRRDDATQNSTKQKLKRTMQWHNMAR 869
>LOC_Os07g20630:12007.t01867:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4676 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 969 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 874 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -2 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1027 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 869 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 956 RPATRRDDATQNSTKQKLKRTMQWHNMAR 870
>LOC_Os05g32340:12005.t02830:unspliced-genomic retrotransposon, putative, centromere-specific, expressed| Length = 4325 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 969 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 874 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -2 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1027 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 869 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 956 RPATRRDDATQNSTKQKLKRTMQWHNMAR 870
>LOC_Os05g23590:12005.t02016:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4581 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 1228 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 1133 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -2 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1286 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 1128 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 1215 RPATRRDDATQNSTKQKLKRTMQWHNMAR 1129
>LOC_Os05g22440:12005.t01905:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3739 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 969 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 874 Score = 40.9 bits (83), Expect = 0.023 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -1 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1027 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKD*KEQCNGTIWLG 869 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 956 RPATRRDDATQNSTKQRLKRTMQWHNMAR 870 Score = 32.7 bits (65), Expect = 6.9 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 / +1 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ +C VEF V SS RVAG Sbjct: 889 CIVLFSLCFVEFCVASSRRVAG 954
>LOC_Os05g22390:12005.t01900:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9443 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 6080 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 5985 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -3 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 6138 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 5980 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 6067 RPATRRDDATQNSTKQKLKRTMQWHNMAR 5981
>LOC_Os04g17620:12004.t01512:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 5360 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 969 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 874 Score = 40.9 bits (83), Expect = 0.023 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -2 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1027 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKD*KEQCNGTIWLG 869 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 956 RPATRRDDATQNSTKQRLKRTMQWHNMAR 870 Score = 32.7 bits (65), Expect = 6.9 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 / +1 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ +C VEF V SS RVAG Sbjct: 889 CIVLFSLCFVEFCVASSRRVAG 954
>LOC_Os04g17470:12004.t01498:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7870 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 4570 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 4475 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 967 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 872 Score = 40.5 bits (82), Expect = 0.031 Identities = 19/34 (55%), Positives = 21/34 (61%) Frame = -1 / -3 Query: 1257 RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 4571 RTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 4470 Score = 40.5 bits (82), Expect = 0.031 Identities = 19/34 (55%), Positives = 21/34 (61%) Frame = -1 / -3 Query: 1257 RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 968 RTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 867 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 4557 RPATRRDDATQNSTKQKLKRTMQWHNMAR 4471 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 954 RPATRRDDATQNSTKQKLKRTMQWHNMAR 868
>LOC_Os02g18230:12002.t01616:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4280 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 967 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 872 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -1 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1025 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 867 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 954 RPATRRDDATQNSTKQKLKRTMQWHNMAR 868
>LOC_Os02g16280:12002.t01421:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4324 Score = 43.2 bits (88), Expect = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 967 ELDAKTSNTT*RCNTKFNKAKTEKNNAMAQYG 872 Score = 40.9 bits (83), Expect = 0.023 Identities = 21/45 (46%), Positives = 24/45 (53%) Frame = -1 / -3 Query: 1290 VTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1001 VQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 867 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 954 RPATRRDDATQNSTKQKLKRTMQWHNMAR 868
>LOC_Os05g36040:12005.t03197:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 3689 Score = 32.2 bits (64), Expect(2) = 0.005 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 2052 STRPRGHSSCKQSKNKQE 1999 Score = 28.6 bits (56), Expect(2) = 0.005 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = -1 / -1 Query: 975 ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 M+ T T RL+ +DVAP*Q +++L+ GAR Sbjct: 2153 MKTTFTARLQPSKDVAP*QPIHRLQWSPLTCGAR 2052 Score = 37.7 bits (76), Expect = 0.21 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 1952 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVD 2053 Score = 30.4 bits (60), Expect(2) = 0.80 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -1 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 2051 QPGHEGTRPASNRRTSK 2001 Score = 22.6 bits (43), Expect(2) = 0.80 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -3 / -3 Query: 979 LDGVDFDDPTKNV*GRRALAIAKPTP 902 LD D PT V R ALA P+P Sbjct: 2157 LDEDDIHGPTTTVQRRCALATDTPSP 2080 Score = 35.4 bits (71), Expect = 1.0 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 1945 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 2052 Score = 33.6 bits (67), Expect = 3.7 Identities = 18/33 (54%), Positives = 19/33 (57%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRL 872 *+F L AIS L LACSS ACR LV L Sbjct: 1953 *NFHLYLAISVLVLLVLACSSIACRTSALVAGL 2051
>LOC_Os08g30050:12008.t02758:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4783 Score = 42.3 bits (86), Expect(2) = 0.005 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 1464 ELDAKTSNTT*RCNIKFNKAKTEKNNAMAQYG 1369 Score = 24.4 bits (47), Expect(2) = 0.005 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 / -1 Query: 872 QPDHEGLFPARKRRTSKKPRL 810 +P H LFP R+ R PRL Sbjct: 178 RPRHPPLFPRRRHRLCL*PRL 116 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -1 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 1522 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 1364 Score = 37.3 bits (75), Expect = 0.29 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 1451 RPATRRDDAT*NSTKQKLKRTMQWHNMAR 1365
>LOC_Os07g22620:12007.t01966:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 5107 Score = 40.5 bits (82), Expect(2) = 0.006 Identities = 19/30 (63%), Positives = 21/30 (70%) Frame = -2 / -2 Query: 1253 LDTKTSNSTRRCNRKFN*ANY*KDYAKAQI 1164 LD TSN+T RCNRK N A K+ AKAQI Sbjct: 963 LDATTSNTT*RCNRKLNKAKTEKNNAKAQI 874 Score = 26.3 bits (51), Expect(2) = 0.006 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -2 / -3 Query: 713 EVAAMANLKSKQNPS 669 E AMA L SKQNPS Sbjct: 458 EEVAMAKLSSKQNPS 414 Score = 39.1 bits (79), Expect = 0.081 Identities = 16/24 (66%), Positives = 18/24 (75%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQR 1172 RPATR DD T NSTKQ ++ MQR Sbjct: 953 RPATRLDDATENSTKQKLKRTMQR 882 Score = 36.3 bits (73), Expect(2) = 0.12 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +3 / +1 Query: 1167 LSLCIIFSVVCLVEFAVTSSCRVAG 1241 L LCI+ C VEF+V SS RVAG Sbjct: 877 LCLCIVLFSFCFVEFSVASSSRVAG 951 Score = 25.8 bits (50), Expect(2) = 0.12 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +1 / +1 Query: 670 LGFCLDFKFAIAATSR 717 LGFCLD AIA +S+ Sbjct: 415 LGFCLDESLAIATSSQ 462
>LOC_Os05g21120:12005.t01873:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 11975 Score = 32.2 bits (64), Expect(2) = 0.006 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -1 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 2054 STRPRGHSSCKQSKNKQE 2001 Score = 28.1 bits (55), Expect(2) = 0.006 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 / -2 Query: 978 *ME*TLTIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 *M+ T T RL+ +D AP*Q +++L+ GAR Sbjct: 2158 *MKSTFTARLQLSKDAAP*QPIHRLQWSPRTCGAR 2054 Score = 30.4 bits (60), Expect(2) = 0.028 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -2 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 2053 QPGHEGTRPASNRRTSK 2003 Score = 27.6 bits (54), Expect(2) = 0.028 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -3 / -1 Query: 982 RLDGVDFDDPTKNV*GRRALAIAKPTP 902 RLD VD PT V R ALA P+P Sbjct: 2162 RLDEVDVHGPTTTVQRRCALATDTPSP 2082 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N+ SCLFF C+Q+ PRG+VD Sbjct: 1954 VKLSSLSSNLSACPTCSCLFFDCLQDECPRGRVD 2055 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 1955 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 2083 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q + FLLVLRL AG PSW G* Sbjct: 1947 FDSETFIFI*QSQCLSYLFLLVLRLLAGRVPSWPG* 2054
>LOC_Os02g32250:12002.t02868:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 6069 Score = 33.6 bits (67), Expect(3) = 0.007 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 / -2 Query: 207 YLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLI 109 +L+++L CT W GC +G+DVLI Sbjct: 2312 HLIVELTCTSAGNRIMKLYLWGRGCIDGVDVLI 2214 Score = 29.0 bits (57), Expect(3) = 0.007 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -2 / -3 Query: 878 HDQPDHEGLFPARKRRTSK 822 HDQP+H+G ++ RTSK Sbjct: 2977 HDQPNHKGNCSCKQSRTSK 2921 Score = 25.4 bits (49), Expect(3) = 0.007 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -1 / -1 Query: 963 LTIRLRTCEDVAP*QSLNQL 904 L +RL DVA *QSL+Q+ Sbjct: 3048 LAVRLHLSRDVAS*QSLHQI 2989 Score = 41.4 bits (84), Expect = 0.017 Identities = 16/23 (69%), Positives = 20/23 (86%) Frame = +1 / +3 Query: 166 PVTRARARQLNYQVLSFIGNTSN 234 P+TRARARQLNYQV SF+ + S+ Sbjct: 2271 PITRARARQLNYQVSSFLNSCSS 2339
>LOC_Os11g23200:12011.t01989:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4336 Score = 42.3 bits (86), Expect = 0.009 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A AQ G Sbjct: 967 ELDAKTSNTT*RCNIKFNKAKTEKNNAMAQYG 872 Score = 40.5 bits (82), Expect = 0.031 Identities = 19/34 (55%), Positives = 21/34 (61%) Frame = -1 / -3 Query: 1257 RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 968 RTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 867 Score = 37.3 bits (75), Expect = 0.29 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 954 RPATRRDDAT*NSTKQKLKRTMQWHNMAR 868
>LOC_Os01g31020:12001.t02686:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12465 Score = 42.3 bits (86), Expect = 0.009 Identities = 17/32 (53%), Positives = 25/32 (78%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+++LP Sbjct: 10240 GPITRARARQLNLEVSSFLCSSLYEFENILLP 10335 Score = 33.6 bits (67), Expect = 3.7 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 G + RARARQLN +V SF+ ++ E +LP Sbjct: 779 GLIARARARQLNLEVSSFLCSSLYEFEKRLLP 874
>LOC_Os04g21280:12004.t01861:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3668 Score = 35.4 bits (71), Expect(2) = 0.009 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTS 231 GP+T A ARQ+NYQ SF+ + S Sbjct: 3283 GPITHAHARQINYQESSFLSSCS 3351 Score = 24.4 bits (47), Expect(2) = 0.009 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +2 / +2 Query: 107 VMRTSIPLLHP 139 +MRTS PL+HP Sbjct: 3227 MMRTSTPLIHP 3259
>LOC_Os09g06499:12009.t00446:unspliced-genomic sulfate transporter 4.1, chloroplast precursor, putative, expressed| Length = 18987 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / +2 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 15773 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 15931 Score = 41.4 bits (84), Expect = 0.017 Identities = 19/32 (59%), Positives = 22/32 (68%) Frame = -2 / +3 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T +CN KFN A K+ A AQ G Sbjct: 15831 ELDAKTSNTT*QCNTKFNKAKTEKNNAMAQYG 15926 Score = 36.3 bits (73), Expect = 0.54 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = -3 / +1 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR D+ T NSTKQ ++ MQ + R Sbjct: 15844 RPATRRDNATQNSTKQKLKRTMQWHNMAR 15930
>LOC_Os07g22000:12007.t01904:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8680 Score = 41.4 bits (84), Expect = 0.017 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 / -1 Query: 1314 DEIRCGDGVTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 D + V N + RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 2893 DTVAATTVVQNVTRTRNSKRTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 2735 Score = 40.5 bits (82), Expect = 0.031 Identities = 19/32 (59%), Positives = 21/32 (65%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+ RCN KFN A K+ A AQ G Sbjct: 2835 ELDAKTSNTM*RCNTKFNKAKTEKNNAMAQYG 2740 Score = 37.3 bits (75), Expect = 0.29 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 2822 RPATRCDDATQNSTKQKLKRTMQWHNMAR 2736
>LOC_Os04g20640:12004.t01800:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6490 Score = 41.4 bits (84), Expect = 0.017 Identities = 19/32 (59%), Positives = 21/32 (65%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T RCN KFN A K+ A Q G Sbjct: 2175 ELDAKTSNTT*RCNTKFNKAKTEKNNAMVQYG 2080 Score = 40.5 bits (82), Expect = 0.031 Identities = 19/34 (55%), Positives = 21/34 (61%) Frame = -1 / -1 Query: 1257 RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 RTR *DQQ D TM +IQ SK K C G+ W G Sbjct: 2176 RTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 2075 Score = 39.6 bits (80), Expect = 0.059 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DD T NSTKQ ++ MQ + R Sbjct: 2162 RPATRRDDATQNSTKQKLKRTMQWYNMAR 2076
>LOC_Os12g15350:12012.t01392:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5947 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 5693 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 5788
>LOC_Os11g32180:12011.t02815:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6855 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 6474 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 6569
>LOC_Os10g15200:12010.t01185:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 612 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 358 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 453
>LOC_Os10g11794:12010.t00975:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 11550 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 11295 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 11390
>LOC_Os07g27070:12007.t02402:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7961 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 6848 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 6943
>LOC_Os07g25240:12007.t02220:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 1405 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 1024 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 1119
>LOC_Os07g25210:12007.t02217:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9531 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 4096 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 4191
>LOC_Os07g20880:12007.t01891:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7228 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 6974 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 7069
>LOC_Os07g20560:12007.t01860:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4709 Score = 41.4 bits (84), Expect = 0.017 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+T ARARQLNYQV SF+ + S+ Sbjct: 4521 GPITHARARQLNYQVSSFLSSYSS 4592 Score = 33.6 bits (67), Expect = 3.7 Identities = 16/32 (50%), Positives = 17/32 (53%) Frame = -2 / -2 Query: 212 ESTW*FNWRARALVTGPVCIXXXXXXXAMVLM 117 E T *F+WRARA V GP C MV M Sbjct: 4570 ELT**FSWRARAWVIGPSCCTWGDVDVLMVFM 4475
>LOC_Os06g39770:12006.t03674:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1970 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 1589 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 1684
>LOC_Os06g24760:12006.t02286:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1993 Score = 41.4 bits (84), Expect = 0.017 Identities = 18/38 (47%), Positives = 26/38 (68%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLPKLDTLV 276 GP+TRARARQLN +V SF+ ++ E+ LP T++ Sbjct: 1739 GPITRARARQLNLEVSSFLCSSLYEFENRFLPNDYTVI 1852
>LOC_Os05g22490:12005.t01910:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10989 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 7429 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 7524
>LOC_Os04g14580:12004.t01277:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10225 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 337 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 432 Score = 38.2 bits (77), Expect = 0.15 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRAR RQLN +V SF+ ++ E+ +LP Sbjct: 7113 GPITRARERQLNLEVSSFLCSSLYEFENGLLP 7208
>LOC_Os01g30980:12001.t02682:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5614 Score = 41.4 bits (84), Expect = 0.017 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 5233 GPITRARARQLNLEVSSFLCSSLYEFENRLLP 5328
>LOC_Os01g30956:12001.t02679:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5387 Score = 41.4 bits (84), Expect = 0.017 Identities = 16/30 (53%), Positives = 24/30 (80%) Frame = +1 / +1 Query: 166 PVTRARARQLNYQVLSFIGNTSNVHEHMML 255 P+TRARAR+LNYQV SF+ N ++ ++ +L Sbjct: 4816 PMTRARARELNYQVKSFLANHTSSSQNWVL 4905
>LOC_Os03g47570:12003.t04116:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2809 Score = 40.9 bits (83), Expect(2) = 0.021 Identities = 18/30 (60%), Positives = 21/30 (70%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQ 1167 ELD TSN+TR+CN K N A K+ AKAQ Sbjct: 954 ELDANTSNTTRQCNTKLNNAKTEKNNAKAQ 865 Score = 23.1 bits (44), Expect(2) = 0.021 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -2 / -1 Query: 704 AMANLKSKQNP 672 AMA L SKQNP Sbjct: 436 AMAKLSSKQNP 404 Score = 34.1 bits (68), Expect(2) = 1.4 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +3 / +1 Query: 1164 NLSLCIIFSVVCLVEFAVTSSCRVAG 1241 +L LCI+ C+VEF V S RVAG Sbjct: 862 SLCLCIVLFSFCVVEFCVALSSRVAG 939 Score = 23.5 bits (45), Expect(2) = 1.4 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 / +3 Query: 670 LGFCLDFKFAIAAT 711 LGFCLD AIA + Sbjct: 402 LGFCLDESLAIATS 443
>LOC_Os09g04320:12009.t00328:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1731 Score = 40.9 bits (83), Expect = 0.023 Identities = 19/30 (63%), Positives = 21/30 (70%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQ 1167 ELD KTSN+TRRCN KFN A + A AQ Sbjct: 936 ELDAKTSNTTRRCNTKFNKAKTE*NKAMAQ 847 Score = 35.9 bits (72), Expect = 0.75 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +3 / +1 Query: 1164 NLSLCIIFSVVCLVEFAVTSSCRVAG 1241 +L C + C VEF V SSCRVAG Sbjct: 844 SLCHCFVLFSFCFVEFCVASSCRVAG 921 Score = 35.0 bits (70), Expect = 1.4 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = -3 / -2 Query: 1243 RPATRHDDVTANSTKQTTEKIMQ 1175 RPATR DD T NSTKQ + Q Sbjct: 923 RPATRQDDATQNSTKQKLNRTKQ 855
>LOC_Os07g32710:12007.t02953:unspliced-genomic expressed protein| Length = 1402 Score = 40.9 bits (83), Expect = 0.023 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -2 / +3 Query: 1397 WWYMAARIMVAWWWYMAARIMVAWWW 1320 WW R AWWW R + +WWW Sbjct: 513 WWLWRRRWWRAWWWRWQGRRIWSWWW 590 Score = 27.2 bits (53), Expect(2) = 1.1 Identities = 7/14 (50%), Positives = 7/14 (50%) Frame = -2 / +3 Query: 1361 WWYMAARIMVAWWW 1320 WW R AWWW Sbjct: 513 WWLWRRRWWRAWWW 554 Score = 25.4 bits (49), Expect(2) = 1.1 Identities = 6/15 (40%), Positives = 8/15 (53%) Frame = -2 / +3 Query: 1400 WWWYMAARIMVAWWW 1356 WWW + R + WW Sbjct: 420 WWWRWSRRWFWSRWW 464
>LOC_Os01g36370:12001.t03185:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 7606 Score = 40.9 bits (83), Expect = 0.023 Identities = 16/32 (50%), Positives = 25/32 (78%) Frame = +1 / -2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V+SF+ ++ E+ ++P Sbjct: 3069 GPITRARARQLNLEVISFLCSSL*EFENRLVP 2974
>LOC_Os03g35650:12003.t03050:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2485 Score = 40.5 bits (82), Expect = 0.031 Identities = 19/32 (59%), Positives = 21/32 (65%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+ RCN KFN A K+ A AQ G Sbjct: 1401 ELDAKTSNTM*RCNTKFNKAKTEKNNAMAQYG 1306
>LOC_Os11g14330:12011.t01264:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7220 Score = 40.5 bits (82), Expect = 0.031 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ LP Sbjct: 6966 GPITRARARQLNLEVSSFLCSSLYEFENRFLP 7061 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRAR RQLN +V SF+ ++ E+ LP Sbjct: 157 GPITRARVRQLNLEVSSFLCSSLYEFENRFLP 252
>LOC_Os09g18200:12009.t01605:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5225 Score = 40.5 bits (82), Expect = 0.031 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ +LP Sbjct: 2886 GPITRARARQLNLEVSSFLCSSL*EFENRLLP 2981
>LOC_Os02g24170:12002.t02115:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5107 Score = 33.1 bits (66), Expect(2) = 0.035 Identities = 15/39 (38%), Positives = 25/39 (64%) Frame = +3 / +2 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRPHTFLVGSSKSTPSKR 983 R++V + +G G+++AKA+RP T +VG S+ S R Sbjct: 1433 RVVVHHKFVTTIGDGISVAKAQRPWTVIVGP*TSSSSNR 1549 Score = 30.9 bits (61), Expect(2) = 0.035 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +1 / +2 Query: 169 VTRARARQLNYQVLSFIGNTSN 234 +T A ARQLNYQV SF+ + S+ Sbjct: 764 ITCACARQLNYQVSSFLSSCSS 829
>LOC_Os06g22840:12006.t02097:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1398 Score = 40.0 bits (81), Expect = 0.043 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ + E+ +LP Sbjct: 1018 GPITRARARQLNLEVSSFLCSYLYKFENRLLP 1113
>LOC_Os12g22610:12012.t01999:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7825 Score = 39.6 bits (80), Expect = 0.059 Identities = 16/31 (51%), Positives = 23/31 (74%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 G +TRARAR+LNYQV SF+ N + ++ +L Sbjct: 7400 GLMTRARARELNYQVKSFLANDTTSSQNWVL 7492
>LOC_Os10g10720:12010.t00877:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4546 Score = 39.6 bits (80), Expect = 0.059 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRAR RQLN +V SF+ ++ E+ +LP Sbjct: 4306 GPITRARTRQLNLEVSSFLCSSLYEFENRLLP 4401
>LOC_Os08g22960:12008.t02068:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 12028 Score = 39.6 bits (80), Expect = 0.059 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ ++ +LP Sbjct: 1686 GPITRARARQLNLEVSSFLCSSLYEFKNRLLP 1781
>LOC_Os07g06580:12007.t00537:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1005 Score = 39.6 bits (80), Expect = 0.059 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ ++ +LP Sbjct: 801 GPITRARARQLNLEVSSFLCSSLYEFKNRLLP 896
>LOC_Os03g23080:12003.t02055:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5084 Score = 39.6 bits (80), Expect = 0.059 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRAR RQLN +V SF+ ++ E+ +LP Sbjct: 4772 GPITRARVRQLNLEVSSFLCSSLYEFENKLLP 4867
>LOC_Os07g32680:12007.t02950:unspliced-genomic fibroin heavy chain precursor, putative, expressed| Length = 1424 Score = 29.9 bits (59), Expect(2) = 0.077 Identities = 6/21 (28%), Positives = 12/21 (57%) Frame = -2 / +1 Query: 1367 AWWWYMAARIMVAWWWYMMKY 1305 +WWW+ + WWW+ ++ Sbjct: 754 SWWWHWWRWRLWRWWWWRPRW 816 Score = 26.7 bits (52), Expect(2) = 0.077 Identities = 7/14 (50%), Positives = 7/14 (50%) Frame = -2 / +1 Query: 1397 WWYMAARIMVAWWW 1356 WW R AWWW Sbjct: 682 WWVWRWRRQRAWWW 723
>LOC_Os06g24470:12006.t02258:unspliced-genomic hypothetical protein| Length = 1453 Score = 33.6 bits (67), Expect(2) = 0.077 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGN 225 GP+ R RARQLNY V SF+ + Sbjct: 793 GPIIRTRARQLNY*VSSFLSS 855 Score = 23.1 bits (44), Expect(2) = 0.077 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +2 / +3 Query: 107 VMRTSIPLLHP 139 VMRTS P +HP Sbjct: 738 VMRTSTPSIHP 770 Score = 28.1 bits (55), Expect(2) = 4.5 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -1 / -1 Query: 141 CGCSNGIDVLIT 106 CGC +G+DVLIT Sbjct: 772 CGCIDGVDVLIT 737 Score = 26.7 bits (52), Expect(2) = 4.5 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -2 / -2 Query: 872 QPDHEGLFPARKRRTSK 822 QP+HEG+ ++ RTSK Sbjct: 1452 QPNHEGICSCKQSRTSK 1402
>LOC_Os01g31240:12001.t02708:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3748 Score = 39.1 bits (79), Expect = 0.081 Identities = 18/30 (60%), Positives = 20/30 (66%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQ 1167 ELD KTSN+T RCN KFN A K+ AQ Sbjct: 957 ELDAKTSNTT*RCNTKFNNAKTEKNNTMAQ 868 Score = 33.6 bits (67), Expect = 3.7 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQ 1175 RPATR DD T NST Q ++ +Q Sbjct: 944 RPATRRDDATQNSTTQKLKRTIQ 876 Score = 32.7 bits (65), Expect = 6.9 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +3 / +1 Query: 1164 NLSLCIIFSVVCLVEFAVTSSCRVAG 1241 +L CI+ C+VEF V SS RVAG Sbjct: 865 SLCHCIVLFSFCVVEFCVASSRRVAG 942
>LOC_Os09g04660:12009.t00362:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4575 Score = 39.1 bits (79), Expect = 0.081 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQL+ +V SF+ ++ E+ +LP Sbjct: 4107 GPITRARARQLSLEVSSFLCSSLYEFENRLLP 4202
>LOC_Os04g14840:12004.t01301:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6617 Score = 39.1 bits (79), Expect = 0.081 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TR ARQLN +V SF+ +T E+ +LP Sbjct: 2341 GPITRVHARQLNLEVSSFLCSTLYEFENRLLP 2436 Score = 37.3 bits (75), Expect = 0.29 Identities = 15/34 (44%), Positives = 24/34 (70%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLPKL 264 GP+TRARA+QL +V SF+ ++ E+ +LP + Sbjct: 6329 GPITRARAQQLTLEVSSFLCSSLYEFENRLLPNV 6430
>LOC_Os07g18700:12007.t01728:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3403 Score = 37.7 bits (76), Expect(2) = 0.11 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRA ARQLN +V SF+ ++ E+ +LP Sbjct: 2339 GPITRACARQLNLEVSSFLCSSLYEFENRLLP 2434 Score = 24.0 bits (46), Expect(2) = 0.11 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 / +1 Query: 796 QYPDCNLGFLLVLRL 840 QYP +LGF ++LRL Sbjct: 2851 QYPPPSLGFCVLLRL 2895
>LOC_Os11g22680:12011.t01938:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4106 Score = 38.6 bits (78), Expect = 0.11 Identities = 18/31 (58%), Positives = 21/31 (67%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQI 1164 EL KTSN+TR CNRK N A K+ A AQ+ Sbjct: 952 ELYAKTSNATR*CNRKLNKAKIEKNNAMAQV 860 Score = 36.8 bits (74), Expect = 0.40 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQ 1175 RPATR DD T NSTKQ ++ MQ Sbjct: 939 RPATRLDDATENSTKQKLKRTMQ 871 Score = 32.7 bits (65), Expect = 6.9 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 / +2 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ C VEF+V SS RVAG Sbjct: 872 CIVLFNFCFVEFSVASSSRVAG 937
>LOC_Os01g56410:12001.t05050:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4301 Score = 38.6 bits (78), Expect = 0.11 Identities = 18/34 (52%), Positives = 21/34 (61%) Frame = -1 / -1 Query: 1257 RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 +TR *DQQ D TM +IQ SK K C G+ W G Sbjct: 965 QTRR*DQQHDVTMQHKIQQSKN*KEQCNGTIWLG 864 Score = 36.8 bits (74), Expect = 0.40 Identities = 17/32 (53%), Positives = 21/32 (65%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 +LD KTSN+ +CN KFN A K+ A AQ G Sbjct: 964 KLDAKTSNTM*QCNTKFNKAKTEKNNAMAQYG 869 Score = 35.0 bits (70), Expect = 1.4 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR D+ T NSTKQ ++ MQ + R Sbjct: 951 RPATRCDNATQNSTKQKLKRTMQWHNMAR 865
>LOC_Os07g24860:12007.t02182:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2738 Score = 38.6 bits (78), Expect = 0.11 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V SF+ ++ E+ + P Sbjct: 1233 GPITRARARQLNLEVSSFLCSSLYEFENRLQP 1328
>LOC_Os06g21270:12006.t01944:unspliced-genomic glycine-rich cell wall structural protein precursor, putative,| expressed Length = 991 Score = 29.5 bits (58), Expect(2) = 0.14 Identities = 7/14 (50%), Positives = 8/14 (57%) Frame = -2 / +2 Query: 1400 WWWYMAARIMVAWW 1359 WWW+ RI WW Sbjct: 575 WWWWRRRRIWWIWW 616 Score = 26.3 bits (51), Expect(2) = 0.14 Identities = 5/16 (31%), Positives = 11/16 (68%) Frame = -2 / +2 Query: 1364 WWWYMAARIMVAWWWY 1317 W W+++ ++ WWW+ Sbjct: 713 WRWWLSWWWILRWWWW 760 Score = 28.6 bits (56), Expect(2) = 0.35 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = -2 / +2 Query: 1403 IWWWYMAARIMVAWWWYMAARI 1338 IWWW+ R WW + RI Sbjct: 563 IWWWWWWWRRRRIWWIWWIRRI 628 Score = 25.8 bits (50), Expect(2) = 0.35 Identities = 7/17 (41%), Positives = 9/17 (52%) Frame = -2 / +2 Query: 1361 WWYMAARIMVAWWWYMM 1311 WW I+ WWW+ M Sbjct: 719 WWLSWWWILRWWWWWRM 769 Score = 29.0 bits (57), Expect(2) = 1.6 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = -2 / +2 Query: 1424 QTRMVMDIWWWYMAARIMVAWWWY 1353 Q R+ IW W+++ ++ WWW+ Sbjct: 689 Q*RLWRRIWRWWLSWWWILRWWWW 760 Score = 23.1 bits (44), Expect(2) = 1.6 Identities = 6/8 (75%), Positives = 6/8 (75%) Frame = -2 / +2 Query: 1364 WWWYMAAR 1341 WWW MA R Sbjct: 755 WWWRMALR 778 Score = 32.7 bits (65), Expect = 6.9 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -2 / +2 Query: 1397 WWYMAARIMVAWWWYMAARIMVAWW 1323 W ++ RI WWW+ RI WW Sbjct: 542 WRWIWWRIWWWWWWWRRRRIWWIWW 616
>LOC_Os12g41150:12012.t03792:unspliced-genomic hypothetical protein| Length = 1328 Score = 38.2 bits (77), Expect = 0.15 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 1170 VKLSSLSSNFSACSTCSCLFFDCLQDECPRGRVD 1271 Score = 37.3 bits (75), Expect = 0.29 Identities = 22/45 (48%), Positives = 24/45 (53%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PLGV 908 *+F L AIS L LACSS ACR LV L +*PL V Sbjct: 1171 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSR*PLEV 1305 Score = 33.6 bits (67), Expect = 3.7 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ FLLVLRL AG PSW G* Sbjct: 1163 FDSETFIFI*QFQCLFYLFLLVLRLLAGRVPSWPG* 1270 Score = 32.7 bits (65), Expect = 6.9 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSKKPRLQSGYCEYKRKALLMK 765 QP HEG PA RRTSK + C K K L K Sbjct: 1269 QPGHEGTRPASNRRTSKNK*NKH*NC*IKMKVSLSK 1162 Score = 32.2 bits (64), Expect = 9.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 1270 STRPRGHSSCKQSKNKQE 1217
>LOC_Os11g22570:12011.t01927:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5951 Score = 38.2 bits (77), Expect = 0.15 Identities = 20/59 (33%), Positives = 27/59 (45%) Frame = -2 / +2 Query: 428 SSCSPYGGFKVRKSPREAPLFSPARAPCLPCFIPLQRISFLSMLGPSFMRTTRVSNLGS 252 SSC+P G +P++SP P P + P S GP F+RT R +GS Sbjct: 587 SSCTPSGPRSPSSRAPYSPVYSPYPHPVSPSYTPGHTPVASSRRGPRFIRTVRKHVVGS 763
>LOC_Os10g21440:12010.t01632:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 648 Score = 38.2 bits (77), Expect = 0.15 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+VD Sbjct: 471 VKLSSLSSNFSACSTCSCLFFDCLQDECPRGRVD 572 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 472 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 600 Score = 33.6 bits (67), Expect = 3.7 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ FLLVLRL AG PSW G* Sbjct: 464 FDSETFIFI*QFQCLFYLFLLVLRLLAGRVPSWPG* 571 Score = 32.7 bits (65), Expect = 6.9 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -2 / -1 Query: 872 QPDHEGLFPARKRRTSKKPRLQSGYCEYKRKALLMK 765 QP HEG PA RRTSK + C K K L K Sbjct: 570 QPGHEGTRPASNRRTSKNK*NKH*NC*IKMKVSLSK 463 Score = 32.2 bits (64), Expect = 9.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 571 STRPRGHSSCKQSKNKQE 518
>LOC_Os02g19610:12002.t01753:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3949 Score = 38.2 bits (77), Expect = 0.15 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +3 / +3 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ C+VEF V SSCRVAG Sbjct: 1614 CIVLFYFCVVEFCVASSCRVAG 1679 Score = 35.4 bits (71), Expect = 1.0 Identities = 17/30 (56%), Positives = 19/30 (63%) Frame = -2 / -3 Query: 1253 LDTKTSNSTRRCNRKFN*ANY*KDYAKAQI 1164 LD TSN+T RCN K N A K+ A AQI Sbjct: 1691 LDAMTSNTT*RCNTKLNNAKIEKNNAMAQI 1602 Score = 35.4 bits (71), Expect = 1.0 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -3 / -1 Query: 1240 PATRHDDVTANSTKQTTEKIMQ 1175 PATRHDD T NST Q ++ MQ Sbjct: 1678 PATRHDDATQNSTTQK*KRTMQ 1613
>LOC_Os09g18310:12009.t01616:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 695 Score = 38.2 bits (77), Expect = 0.15 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRAR RQLN +V SF+ ++ E+ +LP Sbjct: 441 GPITRARTRQLNLKVSSFLYSSL*EFENRLLP 536
>LOC_Os07g18690:12007.t01727:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6001 Score = 38.2 bits (77), Expect = 0.15 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARARQLN +V F+ ++ E+ +LP Sbjct: 5619 GPITRARARQLNLEVSWFLCSSLYEFENRLLP 5714
>LOC_Os06g29320:12006.t02636:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4755 Score = 38.2 bits (77), Expect = 0.15 Identities = 19/32 (59%), Positives = 21/32 (65%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 ELD KTSN+T R N KFN A K+ A AQ G Sbjct: 968 ELDAKTSNTT*RYNTKFNKAKTEKNNAMAQYG 873 Score = 34.1 bits (68), Expect = 2.7 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = -1 / -1 Query: 1257 RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 RTR *D Q D T+ +IQ SK K C G+ W G Sbjct: 969 RTRR*D*QHDVTIQYKIQQSKN*KEQCNGTIWLG 868
>LOC_Os12g13860:12012.t01253:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1500 Score = 36.3 bits (73), Expect(2) = 0.17 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP++RARARQLN +V SF+ ++ E+ +L Sbjct: 235 GPISRARARQLNLEVSSFLCSSLYEFENRLL 327 Score = 23.5 bits (45), Expect(2) = 0.17 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 / +1 Query: 796 QYPDCNLGFLLVLRL 840 QYP +LGF ++LRL Sbjct: 706 QYPPPSLGFWVLLRL 750
>LOC_Os02g24780:12002.t02175:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4837 Score = 37.3 bits (75), Expect(2) = 0.20 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARA QLN +V SF+ ++ E+ +LP Sbjct: 533 GPITRARA*QLNLEVSSFLCSSLYEFENRLLP 628 Score = 24.0 bits (46), Expect(2) = 0.20 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = +1 / +2 Query: 673 GFCLDFKFAIAATSRSL 723 GFCLD+ F + +RS+ Sbjct: 1073 GFCLDYSFKNSFAARSV 1123
>LOC_Os07g25810:12007.t02277:unspliced-genomic expressed protein| Length = 1681 Score = 37.7 bits (76), Expect = 0.21 Identities = 11/27 (40%), Positives = 12/27 (44%) Frame = -2 / +3 Query: 1400 WWWYMAARIMVAWWWYMAARIMVAWWW 1320 WWW R + WWW R A WW Sbjct: 318 WWWRRRRRWLRRWWWVWWRRWWRARWW 398 Score = 28.6 bits (56), Expect(2) = 1.5 Identities = 6/15 (40%), Positives = 7/15 (46%) Frame = -2 / +3 Query: 1364 WWWYMAARIMVAWWW 1320 WWW+ WWW Sbjct: 990 WWWFWKRWRSWGWWW 1034 Score = 23.5 bits (45), Expect(2) = 1.5 Identities = 5/16 (31%), Positives = 8/16 (50%) Frame = -2 / +3 Query: 1400 WWWYMAARIMVAWWWY 1353 W W+ + WWW+ Sbjct: 852 WSWWRHWQRRWTWWWF 899 Score = 34.1 bits (68), Expect = 2.7 Identities = 9/27 (33%), Positives = 11/27 (40%) Frame = -2 / +3 Query: 1400 WWWYMAARIMVAWWWYMAARIMVAWWW 1320 WW + WWW R + WWW Sbjct: 282 WWRLWERWWLWRWWWRRRRRWLRRWWW 362
>LOC_Os03g35990:12003.t03076:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3945 Score = 37.7 bits (76), Expect = 0.21 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -2 / -3 Query: 1283 TMNRTRNSKELDTKTSNSTRRCNRKFN 1203 T ELD KTSNST+RCN K N Sbjct: 994 TCQELETLNELDAKTSNSTQRCNTKLN 914
>LOC_Os03g34210:12003.t03009:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3661 Score = 37.7 bits (76), Expect = 0.21 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = -1 / -2 Query: 1290 VTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 V N + RT+ DQQ D+TM* + Q SK K C G+ W G Sbjct: 1005 VLNVTRTRNSKRTKRYDQQHDSTM*RKTQQSKN*KEQCNGTIWLG 871 Score = 35.4 bits (71), Expect = 1.0 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = -2 / -3 Query: 1253 LDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 L+ TSN+T+RCN K N A K+ A AQ G Sbjct: 968 LNAMTSNTTQRCNAKLNKAKTEKNNAMAQYG 876 Score = 34.5 bits (69), Expect = 1.9 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = -3 / -1 Query: 1240 PATRHDDVTANSTKQTTEKIMQRLRLVR 1157 PATR +DVT NSTKQ ++ MQ + R Sbjct: 955 PATRLNDVTQNSTKQKLKRTMQWHNMAR 872 Score = 32.2 bits (64), Expect = 9.5 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +3 / +3 Query: 1176 CIIFSVVCLVEFAVTSSCRVAG 1241 CI+ C VEF VTS RVAG Sbjct: 891 CIVLFSFCFVEFCVTSLSRVAG 956
>LOC_Os09g06210:12009.t00418:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 920 Score = 37.7 bits (76), Expect = 0.21 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGN 225 GP+T A ARQLNYQV SF+ + Sbjct: 593 GPITHAHARQLNYQVRSFLNS 655
>LOC_Os04g19440:12004.t01684:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1160 Score = 37.7 bits (76), Expect = 0.21 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 G +TRARARQLN +V SF+ ++ E+ +LP Sbjct: 779 GQITRARARQLNLEVSSFLCSSLYEFENRLLP 874
>LOC_Os04g18244:12004.t01569:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9915 Score = 37.7 bits (76), Expect = 0.21 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = +1 / -1 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRAR RQLN +V SF+ ++ ++ +LP Sbjct: 3501 GPITRARVRQLNLEVSSFLCSSLYEFKNRLLP 3406
>LOC_Os03g23250:12003.t02070:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6664 Score = 37.7 bits (76), Expect = 0.21 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = +1 / -1 Query: 166 PVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 P+TRARARQLN +V SF+ ++ E+ ++P Sbjct: 4225 PITRARARQLNLEVSSFLCSSLYEFENRLIP 4133
>LOC_Os01g32010:12001.t02781:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5873 Score = 33.1 bits (66), Expect(2) = 0.24 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQ 204 GP+TRARAR+LNYQ Sbjct: 4813 GPMTRARARELNYQ 4854 Score = 28.1 bits (55), Expect(2) = 0.24 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 / +2 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG+ +AKA+ P Sbjct: 5381 RLFLARQEQQQRGVGVPVAKAQHP 5452
>LOC_Os11g13930:12011.t01227:unspliced-genomic zinc finger homeodomain protein 1, putative, expressed| Length = 2040 Score = 31.8 bits (63), Expect(2) = 0.25 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -2 / -3 Query: 1436 PKPKQTRMVMDIWWWYMAARIMVAWWWY 1353 P P T + D W M + +M+ WWW+ Sbjct: 1033 PPPPLTSISSDSDVWIMLSGMMIWWWWW 950 Score = 23.1 bits (44), Expect(2) = 0.25 Identities = 5/14 (35%), Positives = 6/14 (42%) Frame = -2 / -3 Query: 1361 WWYMAARIMVAWWW 1320 WW+ WWW Sbjct: 844 WWWCGRAGPRRWWW 803
>LOC_Os12g19820:12012.t01825:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 651 Score = 32.2 bits (64), Expect(2) = 0.27 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -2 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 563 STLPRGHSSCKQSKNKQE 510 Score = 22.6 bits (43), Expect(2) = 0.27 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q ++ L+ GAR Sbjct: 649 TARLQPSKDAAP*QPIHCLQWSPRTCGAR 563 Score = 35.4 bits (71), Expect = 1.0 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +K F I SCLFF C+Q+ PRG+VD Sbjct: 463 VKTFIVI*QFSACSTCSCLFFDCLQDECPRGRVD 564
>LOC_Os12g19810:12012.t01824:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7048 Score = 37.3 bits (75), Expect = 0.29 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSN 234 GP+TRA ARQLN QV SF+ + S+ Sbjct: 6275 GPITRAHARQLNNQVSSFLSSFSS 6346 Score = 33.1 bits (66), Expect = 5.0 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -1 / -1 Query: 216 KRKYLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLI 109 +R +L+++L C W GC +G+DVLI Sbjct: 6328 ERTHLIVELTCMSAGNRTMKLYLWGRGCIDGVDVLI 6221
>LOC_Os09g04030:12009.t00299:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2747 Score = 37.3 bits (75), Expect = 0.29 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARAR LN +V SF+ ++ E+ +LP Sbjct: 2480 GPITRARAR*LNLEVSSFLCSSLYEFENRLLP 2575
>LOC_Os03g29940:12003.t02604:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6627 Score = 37.3 bits (75), Expect = 0.29 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP+TRARAR LN +V SF+ ++ E+ +LP Sbjct: 6237 GPITRARAR*LNLEVSSFLCSSLYEFENRLLP 6332 Score = 32.7 bits (65), Expect = 6.9 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = -2 / -3 Query: 269 VSNLGSIICS*TLEVFPINESTW*FNWRARALVTGP 162 + +LGS + S + + NE T FN+RARALV GP Sbjct: 6343 IQSLGSNLFSNSYKEEHRNELTSKFNYRARALVIGP 6236
>LOC_Os09g04930:12009.t00389:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4020 Score = 36.8 bits (74), Expect(2) = 0.31 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = +1 / -3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 GP++RARARQLN +V F+ ++ E+ +LP Sbjct: 2281 GPISRARARQLNLEVSLFLCSSLYEFENRLLP 2186 Score = 23.5 bits (45), Expect(2) = 0.31 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 / -2 Query: 796 QYPDCNLGFLLVLRL 840 QYP +LGF ++LRL Sbjct: 1775 QYPPPSLGFWVLLRL 1731
>LOC_Os03g61990:12003.t05427:unspliced-genomic glycine-rich RNA-binding protein 8, putative, expressed| Length = 3234 Score = 29.0 bits (57), Expect(2) = 0.33 Identities = 6/14 (42%), Positives = 8/14 (57%) Frame = -2 / +2 Query: 1397 WWYMAARIMVAWWW 1356 WW+ A + WWW Sbjct: 1715 WWWWACTTWLRWWW 1756 Score = 25.4 bits (49), Expect(2) = 0.33 Identities = 6/17 (35%), Positives = 9/17 (52%) Frame = -2 / +2 Query: 1370 VAWWWYMAARIMVAWWW 1320 V WWW+ + + WW Sbjct: 1856 VRWWWWRWRPLWI*PWW 1906
>LOC_Os04g24380:12004.t02151:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 657 Score = 30.4 bits (60), Expect(2) = 0.36 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSK 822 QP HEG PA RRTSK Sbjct: 568 QPGHEGTRPASNRRTSK 518 Score = 24.0 bits (46), Expect(2) = 0.36 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q +++L+ GAR Sbjct: 655 TARLQRSKDAAP*QLIHRLQWSPRTCGAR 569 Score = 35.4 bits (71), Expect = 1.0 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +3 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 462 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 569 Score = 32.7 bits (65), Expect = 6.9 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 / +1 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N S LFF C+Q+ PRG+VD Sbjct: 469 VKLSSLSSNFSACPTCSYLFFDCLQDECPRGRVD 570
>LOC_Os08g23800:12008.t02151:unspliced-genomic hypothetical protein| Length = 1769 Score = 36.8 bits (74), Expect = 0.40 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -2 / -3 Query: 1460 KSNRSRN*PKPKQTRMVMDIWWWYMAARIMVAWWWYMAARIMVAWW 1323 K+ R + K+ +D WWW+ I +AWW AR+ + ++ Sbjct: 1149 KTGERRKKTEKKEIDGKLDAWWWHCPNFIELAWWPAQIARLALLYF 1012
>LOC_Os04g55020:12004.t04975:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5960 Score = 36.8 bits (74), Expect = 0.40 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = -2 / +1 Query: 428 SSCSPYGGFKVRKSPREAPLFSPARAPCLPCFIPLQRISFLSMLGPSFMRTTRVSNLGS 252 S+C+P G +P++SP P P + P S GP F+RT R +GS Sbjct: 589 SACTPSGPRSPSSRAPYSPVYSPYPHPVSPSYTPGHTPVASSRRGPRFIRTARKRVVGS 765
>LOC_Os02g24660:12002.t02163:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1129 Score = 36.8 bits (74), Expect = 0.40 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = +2 / -3 Query: 710 LRVLCLCSTTRQRRHRTPPSSIKLFSYIRNILIAILVSCLFFVC 841 L LC CS RTP SS+ LF Y R + +L L F C Sbjct: 749 LHYLCYCSFASSSICRTPNSSV*LFIYNRVAIYLVLACVLRFAC 618
>LOC_Os02g07960:12002.t00692:unspliced-genomic ATP binding protein, putative, expressed| Length = 10006 Score = 36.8 bits (74), Expect = 0.40 Identities = 10/27 (37%), Positives = 12/27 (44%) Frame = -2 / -2 Query: 1400 WWWYMAARIMVAWWWYMAARIMVAWWW 1320 WWW+ R W W+ R WWW Sbjct: 4095 WWWWRRRRRPRRWRWWCRRRRRRWWWW 4015
>LOC_Os11g24800:12011.t02100:unspliced-genomic expressed protein| Length = 2632 Score = 24.9 bits (48), Expect(3) = 0.42 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +3 / -2 Query: 867 RLIVLRRDQ*PLGVGLAIAKAR 932 RL + R++Q GVG+ +AKA+ Sbjct: 1878 RLFLARQEQQQRGVGVPVAKAQ 1813 Score = 22.6 bits (43), Expect(3) = 0.42 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = +3 / -1 Query: 822 LACSSFACR 848 LACSS ACR Sbjct: 1909 LACSSIACR 1883 Score = 22.1 bits (42), Expect(3) = 0.42 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = +1 / -2 Query: 670 LGFCLDFKFAIAAT 711 LGFCLD A A + Sbjct: 2067 LGFCLDVSLAAATS 2026
>LOC_Os03g31542:12003.t02751:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3617 Score = 30.9 bits (61), Expect(2) = 0.44 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -2 / -2 Query: 1244 KTSNSTRRCNRKFN*ANY*KDYAKAQI 1164 + + +TRRCNRK N A D A AQ+ Sbjct: 2377 RPATTTRRCNRKLNKAKTEMDNAMAQV 2297 Score = 23.1 bits (44), Expect(2) = 0.44 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -1 / -3 Query: 1257 RTRH*DQQL 1231 RTRH*DQQL Sbjct: 2391 RTRH*DQQL 2365
>LOC_Os02g04820:12002.t00380:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2149 Score = 29.9 bits (59), Expect(2) = 0.45 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = -2 / -3 Query: 872 QPDHEGLFPARKRRTSKKPRLQSGYCEYKRKALLMK 765 QP HE PA RRTSK + C K K L K Sbjct: 2060 QPGHESTRPASNRRTSKNK*NKH*NC*IKMKVSLSK 1953 Score = 24.0 bits (46), Expect(2) = 0.45 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 / -3 Query: 960 TIRLRTCEDVAP*QSLNQLREVIDHAGAR 874 T RL+ +D AP*Q ++ L+ GAR Sbjct: 2147 TARLQPSKDAAP*QPIHHLQWSPRTCGAR 2061 Score = 34.5 bits (69), Expect = 1.9 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ RG+VD Sbjct: 1961 VKLSSLSSNFSACSTCSCLFFDCLQDECSRGRVD 2062 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 1962 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 2090
>LOC_Os07g23980:12007.t02095:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3686 Score = 36.3 bits (73), Expect(2) = 0.52 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN*ANY*KDYAKAQI 1164 EL+ TSN+T RCN KFN A K+ A AQ+ Sbjct: 965 ELNAMTSNTT*RCNTKFNKAKTEKNNAMAQM 873 Score = 23.1 bits (44), Expect(2) = 0.52 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -2 / -3 Query: 704 AMANLKSKQNP 672 AMA L SKQNP Sbjct: 450 AMAKLSSKQNP 418 Score = 35.9 bits (72), Expect = 0.75 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -3 / -2 Query: 1240 PATRHDDVTANSTKQTTEKIMQ 1175 PATR DD T NSTKQ ++ MQ Sbjct: 949 PATRRDDATQNSTKQKLKRTMQ 884 Score = 32.2 bits (64), Expect(2) = 5.6 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +3 / +3 Query: 1164 NLSLCIIFSVVCLVEFAVTSSCRVAG 1241 +L CI+ C VEF V SS RVAG Sbjct: 873 HLCHCIVLFSFCFVEFCVASSRRVAG 950 Score = 23.5 bits (45), Expect(2) = 5.6 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 / +2 Query: 670 LGFCLDFKFAIAAT 711 LGFCLD AIA + Sbjct: 416 LGFCLDESLAIATS 457
>LOC_Os07g32700:12007.t02952:unspliced-genomic conserved hypothetical protein| Length = 891 Score = 36.3 bits (73), Expect = 0.54 Identities = 9/26 (34%), Positives = 12/26 (46%) Frame = -2 / +3 Query: 1397 WWYMAARIMVAWWWYMAARIMVAWWW 1320 WW+ WWW R + +WWW Sbjct: 498 WWFWRRWRWRDWWWRWQGRRVWSWWW 575
>LOC_Os06g25350:12006.t02343:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2857 Score = 36.3 bits (73), Expect = 0.54 Identities = 14/18 (77%), Positives = 15/18 (83%) Frame = -2 / -2 Query: 1256 ELDTKTSNSTRRCNRKFN 1203 ELD KTSN+T RCN KFN Sbjct: 957 ELDAKTSNTT*RCNTKFN 904
>LOC_Os02g04830:12002.t00381:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 702 Score = 36.3 bits (73), Expect = 0.54 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 / +3 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +K S N SCLFF C+Q+ PRG+VD Sbjct: 525 VKFSSLSSNFSACSTCSCLFFDCLQDECPRGRVD 626 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 526 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 654 Score = 33.1 bits (66), Expect = 5.0 Identities = 18/44 (40%), Positives = 20/44 (45%) Frame = -2 / -1 Query: 872 QPDHEGLFPARKRRTSKKPRLQSGYCEYKRKALLMKVGFCDVFV 741 QP HEG PA RRTSK + C K K L K V + Sbjct: 624 QPGHEGTRPASNRRTSKNK*NKH*NC*IKMKISLSKHNMVGVLI 493 Score = 33.1 bits (66), Expect = 5.0 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 / +2 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ FLLVLRL AG PSW G* Sbjct: 518 FDSEIFIFI*QFQCLFYLFLLVLRLLAGRVPSWPG* 625 Score = 32.2 bits (64), Expect = 9.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 / -3 Query: 873 ST*PRGSVSCTQTKNKQE 820 ST PRG SC Q+KNKQE Sbjct: 625 STRPRGHSSCKQSKNKQE 572
>LOC_Os01g23680:12001.t02094:unspliced-genomic cysteine sulfinate desulfinase/cysteine desulfurase and related| enzymes, putative, expressed Length = 4653 Score = 36.3 bits (73), Expect = 0.54 Identities = 10/34 (29%), Positives = 17/34 (50%) Frame = -2 / +2 Query: 1418 RMVMDIWWWYMAARIMVAWWWYMAARIMVAWWWY 1317 R++ WWW+ + + WWW R + A W+ Sbjct: 323 RLIGSWWWWWWIGWLWLRWWW*RRRRRLSA*RWW 424 Score = 32.2 bits (64), Expect = 9.5 Identities = 6/15 (40%), Positives = 9/15 (60%) Frame = -2 / +2 Query: 1364 WWWYMAARIMVAWWW 1320 WWW+ + + WWW Sbjct: 341 WWWWWIGWLWLRWWW 385
>LOC_Os02g24000:12002.t02098:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1625 Score = 35.9 bits (72), Expect = 0.75 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -1 / +1 Query: 1290 VTNYEQNSKL*RTRH*DQQLDTTM*PQIQLSKLLKRLCKGSDWFG 1156 V N + RT+ *DQQ D+ M* + Q SK C G+ W G Sbjct: 325 VLNVTRTRNSKRTKR*DQQHDSKM*RKTQQSKNRNEQCNGTIWLG 459 Score = 35.9 bits (72), Expect = 0.75 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = -2 / +2 Query: 1253 LDTKTSNSTRRCNRKFN*ANY*KDYAKAQIG 1161 L+ KTSN+T+RCN K N A + A AQ G Sbjct: 362 LNAKTSNTTQRCNAKLNKAKIEMNNAMAQYG 454 Score = 34.1 bits (68), Expect = 2.7 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -3 / +3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQRLRLVR 1157 RPATR DVT NSTKQ ++ MQ + R Sbjct: 372 RPATRLKDVTQNSTKQKSK*TMQWHNMAR 458
>LOC_Os02g31000:12002.t02793:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3067 Score = 32.2 bits (64), Expect(2) = 0.81 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 / -1 Query: 1259 KELDTKTSNSTRRCNRKFN 1203 K+ T+TSNST RCNRK + Sbjct: 1003 KD*TTRTSNSTNRCNRKLS 947 Score = 26.3 bits (51), Expect(2) = 0.81 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 929 RLSNR*TNSERLLITPEHDQP 867 RLSNR T+S LL P +QP Sbjct: 695 RLSNRCTDSTLLLFLPCQEQP 633 Score = 27.6 bits (54), Expect(3) = 4.4 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +1 / +1 Query: 169 VTRARARQLNYQVLSFIGNTSNVHEHMML 255 +TRARA + NYQV SF+ + ++ +L Sbjct: 1 MTRARACERNYQVKSFLATHISSSQNWVL 87 Score = 24.9 bits (48), Expect(3) = 4.4 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +3 / +3 Query: 867 RLIVLRRDQ*PLGVGLAIAKARRP 938 RL + R++Q GVG +AKA P Sbjct: 633 RLFLARQEQQQRGVGAPVAKA*HP 704 Score = 23.1 bits (44), Expect(3) = 4.4 Identities = 6/24 (25%), Positives = 13/24 (54%) Frame = +1 / +1 Query: 1294 VTASYFIIYHHHATIILAAIYHHH 1365 + +FI YHH +++ + +H Sbjct: 1699 IAPQFFIYYHHRIVLVVGSGTTNH 1770
>LOC_Os05g36030:12005.t03196:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 701 Score = 35.4 bits (71), Expect = 1.0 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 / +1 Query: 766 FINKAFLLYSQYPDCNLGFLLVLRLRAGNRPSWSG* 873 F ++ F+ Q+ + FLLVLRL AG PSW G* Sbjct: 517 FDSETFIFI*QFQCLSYLFLLVLRLLAGRVPSWPG* 624 Score = 35.4 bits (71), Expect = 1.0 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 773 IKLFSYIRNILIAILVSCLFFVCVQETDPRGQVD 874 +KL S N SCLFF C+Q+ PRG+V+ Sbjct: 524 VKLSSLSSNFSACPTCSCLFFDCLQDECPRGRVN 625 Score = 34.1 bits (68), Expect = 2.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 774 *SFSLIFAIS*LQSWFLACSSFACRKQTLVVRLIVLRRDQ*PL 902 *+F L AIS L LACSS ACR LV L + PL Sbjct: 525 *NFHLYLAISVLVLLVLACSSIACRTSALVAGLTRTTSSRRPL 653
>LOC_Os04g13270:12004.t01148:unspliced-genomic hypothetical protein| Length = 1637 Score = 35.4 bits (71), Expect = 1.0 Identities = 8/26 (30%), Positives = 12/26 (46%) Frame = -2 / +2 Query: 1403 IWWWYMAARIMVAWWWYMAARIMVAW 1326 +WWW R WWW + + + W Sbjct: 284 VWWWATRRRRRFLWWWLLVS*VRERW 361
>LOC_Os04g17780:12004.t01525:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4307 Score = 29.0 bits (57), Expect(2) = 1.1 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = -2 / -2 Query: 1253 LDTKTSNSTRRCN 1215 L++KTSN+TRRCN Sbjct: 964 LNSKTSNTTRRCN 926 Score = 23.5 bits (45), Expect(2) = 1.1 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = -2 / -1 Query: 1301 AVTA*QTMNRTRNSK 1257 A T Q M RTRNSK Sbjct: 1013 ATTVVQNMTRTRNSK 969
>LOC_Os01g39330:12001.t03463:unspliced-genomic helix-loop-helix DNA-binding domain containing protein, expressed| Length = 4444 Score = 29.9 bits (59), Expect(2) = 1.1 Identities = 9/25 (36%), Positives = 12/25 (48%) Frame = -2 / +1 Query: 1394 WYMAARIMVAWWWYMAARIMVAWWW 1320 W R+ + WW + A VA WW Sbjct: 388 WREGRRVTLGWWPWTTATTGVASWW 462 Score = 28.6 bits (56), Expect(2) = 1.1 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -2 / +1 Query: 395 RKSPREAPLFSPARAPCLP 339 R+SPR AP S A APC P Sbjct: 508 RRSPRAAPSPSTAPAPCPP 564
>LOC_Os06g20890:12006.t01906:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1359 Score = 29.0 bits (57), Expect(2) = 1.1 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 / +1 Query: 166 PVTRARARQLNYQVLSFIGNTS 231 P++ ARAR LNYQV F+ + S Sbjct: 673 PISCARAR*LNYQVSEFLSSYS 738 Score = 23.5 bits (45), Expect(2) = 1.1 Identities = 10/29 (34%), Positives = 12/29 (41%) Frame = +2 / +2 Query: 107 VMRTSIPLLHPXXXXXXXXXXXXXXVHAN 193 +MRTS P +HP VH N Sbjct: 614 MMRTSTPSIHPRLHKYNFMILFPALVHVN 700 Score = 33.6 bits (67), Expect = 3.7 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 / -1 Query: 207 YLVIQLACTXXXXXXXXXXSWCCGCSNGIDVLI 109 +L+++L CT W GC +G+DVLI Sbjct: 714 HLIVELTCTSAGNRIMKLYLWRRGCIDGVDVLI 616
>LOC_Os01g71440:12001.t06440:unspliced-genomic F-box domain containing protein| Length = 1155 Score = 35.0 bits (70), Expect = 1.4 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -2 / -3 Query: 434 PKSSCSPYGGFKVRKSPREAPLFSPARAP 348 P+ SCSP G + R +PR P +PA AP Sbjct: 793 PRRSCSP*AGRRRRPTPRGRPTCTPASAP 707
>LOC_Os06g47460:12006.t04432:unspliced-genomic hypothetical protein| Length = 4174 Score = 35.0 bits (70), Expect = 1.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 / +2 Query: 402 *SAEITKGSSIVLSRACPLFAMLHPAPTDILP 307 *+ +T GS +V+ +CP A HP P ILP Sbjct: 989 *AISLTYGSHVVIFASCPTSAPRHPKPLSILP 1084
>LOC_Os02g34900:12002.t03128:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 8074 Score = 35.0 bits (70), Expect = 1.4 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = +1 / +3 Query: 166 PVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 P++RARARQLN +V SF+ ++ ++ +LP Sbjct: 1305 PISRARARQLNLEVSSFLCSSLYEFKNRLLP 1397
>LOC_Os01g08530:12001.t00731:unspliced-genomic fibroin heavy chain precursor, putative, expressed| Length = 1461 Score = 27.2 bits (53), Expect(2) = 1.5 Identities = 6/21 (28%), Positives = 11/21 (52%) Frame = -2 / +3 Query: 1367 AWWWYMAARIMVAWWWYMMKY 1305 +WWW R WW ++ ++ Sbjct: 618 SWWWGRTRRRWNGWWQWVWRW 680 Score = 24.9 bits (48), Expect(2) = 1.5 Identities = 6/14 (42%), Positives = 6/14 (42%) Frame = -2 / +3 Query: 1400 WWWYMAARIMVAWW 1359 WWW R WW Sbjct: 546 WWWGQIRRRWNGWW 587
>LOC_Os06g28840:12006.t02588:unspliced-genomic expressed protein| Length = 3570 Score = 34.5 bits (69), Expect = 1.9 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -3 / +1 Query: 607 GKGSENSPSLGFPTHTDSKNSLYYGISKLHGPGPKIRWRNTYNSQ 473 G GS+NS +LG + N L G L GP + R+TY Q Sbjct: 664 GDGSDNSMALGGSLDVRNPNGLPVGCQPLSKQGPSKQIRSTYKQQ 798
>LOC_Os03g62830:12003.t05510:unspliced-genomic expressed protein| Length = 3234 Score = 34.5 bits (69), Expect = 1.9 Identities = 9/28 (32%), Positives = 14/28 (50%) Frame = -2 / +1 Query: 1397 WWYMAARIMVAWWWYMAARIMVAWWWYM 1314 WW A R+ WW R++ W W++ Sbjct: 2518 WWIQAGRLQR*WWLPAGPRLLRQWQWWL 2601 Score = 32.7 bits (65), Expect = 6.9 Identities = 8/29 (27%), Positives = 15/29 (51%) Frame = -2 / +1 Query: 1400 WWWYMAARIMVAWWWYMAARIMVAWWWYM 1314 WW R++ W W++ A + W W++ Sbjct: 2551 WWLPAGPRLLRQWQWWLPAGPRLLWQWWL 2637
>LOC_Os01g68800:12001.t06235:unspliced-genomic expressed protein| Length = 937 Score = 34.5 bits (69), Expect = 1.9 Identities = 9/29 (31%), Positives = 14/29 (48%) Frame = -2 / -1 Query: 1403 IWWWYMAARIMVAWWWYMAARIMVAWWWY 1317 +W W+ + M WWW +R WW+ Sbjct: 157 MWPWWWGQKRMWTWWWCRGSRWRWRRWWW 71
>LOC_Os03g43490:12003.t03744:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1316 Score = 34.5 bits (69), Expect = 1.9 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +1 / +2 Query: 163 GPVTRARARQLNYQVLSFIGNTS 231 GP+TRARARQL+Y V F+ + S Sbjct: 974 GPITRARARQLDY*VSLFLSSCS 1042
>LOC_Os01g11130:12001.t00986:unspliced-genomic expressed protein| Length = 8755 Score = 28.6 bits (56), Expect(2) = 2.4 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -1 / -3 Query: 303 HARSFIHENNKSI*LRQHHMFMNIRSIPNKRKYLVIQLA 187 H+ F + +K LR H ++ IR IPN+ + IQ+A Sbjct: 3626 HSNYFTGKLHKLEKLRSHPIYTIIRRIPNQFLFYEIQIA 3510 Score = 22.6 bits (43), Expect(2) = 2.4 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = -3 / -3 Query: 358 RVPLVCHASSRSN 320 +VPL+CH SN Sbjct: 3656 KVPLICH*KGHSN 3618
>LOC_Os06g39270:12006.t03625:unspliced-genomic indole-3-acetate beta-glucosyltransferase, putative, expressed| Length = 1739 Score = 34.1 bits (68), Expect = 2.7 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -2 / -3 Query: 434 PKSSCSPYGGFKVRKSPREAPLFSPA 357 P ++CS GG + R++PR AP PA Sbjct: 957 PPAACSSTGGSRTRRTPRSAPASCPA 880
>LOC_Os10g08420:12010.t00663:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3278 Score = 34.1 bits (68), Expect = 2.7 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 163 GPVTRARARQLNYQVLSFI 219 GP+TRA ARQLN +V SF+ Sbjct: 745 GPITRASARQLNLEVSSFL 801
>LOC_Os01g46650:12001.t04115:unspliced-genomic hypothetical protein| Length = 1890 Score = 32.7 bits (65), Expect(2) = 3.1 Identities = 8/27 (29%), Positives = 13/27 (48%) Frame = -2 / -1 Query: 1400 WWWYMAARIMVAWWWYMAARIMVAWWW 1320 WWW+ + +WW + + A WW Sbjct: 1824 WWWWWRPNQLRSWWRWHDLDLRPASWW 1744 Score = 23.1 bits (44), Expect(2) = 3.1 Identities = 13/45 (28%), Positives = 19/45 (42%) Frame = -2 / -3 Query: 845 ARKRRTSKKPRLQSGYCEYKRKALLMKVGFCDVFVWS*NTNKERE 711 A + +KP S E K A +K+G FV N ++ E Sbjct: 1390 AHSPQERRKPTTFSPLMETKPSAFSLKIGKAQHFVTENNAQEKTE 1256
>LOC_Os03g29430:12003.t02566:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4293 Score = 33.6 bits (67), Expect = 3.7 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = -3 / -3 Query: 1243 RPATRHDDVTANSTKQTTEKIMQ 1175 RPATR +DVT NSTKQ + MQ Sbjct: 937 RPATRLNDVTQNSTKQKPK*TMQ 869 Score = 33.1 bits (66), Expect = 5.0 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = -2 / -2 Query: 1253 LDTKTSNSTRRCNRKFN*ANY*KDYAKAQ 1167 L+ KTSN+T+RCN K N A + A AQ Sbjct: 947 LNAKTSNTTQRCNAKLNKAKTEMNNAMAQ 861
>LOC_Os01g31970:12001.t02777:unspliced-genomic hypothetical protein| Length = 1117 Score = 33.6 bits (67), Expect = 3.7 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -2 / -3 Query: 902 ERLLITPEHDQPDHEGLFPARKRRTSKKPR 813 +RL+I E++QP+HEG + RT KK + Sbjct: 1076 KRLVILMENNQPNHEGTHSYEQSRTGKKKK 987
>LOC_Os06g27990:12006.t02504:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4618 Score = 29.0 bits (57), Expect(3) = 3.7 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = -2 / -3 Query: 1253 LDTKTSNSTRRCN 1215 L++KTSN+TRRCN Sbjct: 926 LNSKTSNTTRRCN 888 Score = 24.4 bits (47), Expect(3) = 3.7 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -3 / -2 Query: 1009 PVFR*DRGYRLDGVDFDDPTKNV 941 P+FR* + G D DDPT V Sbjct: 699 PIFR*VEITTICGKDVDDPTTTV 631 Score = 23.5 bits (45), Expect(3) = 3.7 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = -3 / -3 Query: 763 WGSVTSLSGRRTQTKNAKLQLWRT*NLNKTQV 668 WG V + T+ A+ W +LNKTQ+ Sbjct: 467 WGFVYKQTDGLADTRAARK*QWLKFHLNKTQL 372
>LOC_Os10g24920:12010.t01917:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4348 Score = 28.1 bits (55), Expect(2) = 4.6 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNR 1212 ELD KTSN+T +CN+ Sbjct: 982 ELDAKTSNTT*QCNK 938 Score = 22.1 bits (42), Expect(2) = 4.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -2 / -2 Query: 1133 IFFWLFRG 1110 IFFWLF G Sbjct: 870 IFFWLFSG 847
>LOC_Os08g35800:12008.t03320:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3215 Score = 25.8 bits (50), Expect(2) = 4.7 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +3 / +1 Query: 897 PLGVGLAIAKARRPHTFLVGSSKSTPSKRYPRS 995 PLG L RR T L ++ + P+ R PRS Sbjct: 3115 PLGSRLPSTPTRRAATVLWTTATTRPATREPRS 3213 Score = 24.4 bits (47), Expect(2) = 4.7 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 / +1 Query: 734 TTRQRRHRTPPSSIKLFSYIR 796 TTR RR TPP++ S +R Sbjct: 3052 TTRARRSGTPPTTSSTASRVR 3114
>LOC_Os12g01380:12012.t00037:unspliced-genomic expressed protein| Length = 4422 Score = 33.1 bits (66), Expect = 5.0 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -2 / -3 Query: 1370 VAWWWYMAARIMVAWWW 1320 V WWW+ A VAW W Sbjct: 97 VRWWWWKGATAAVAWTW 47
>LOC_Os07g02540:12007.t00145:unspliced-genomic HLS1, putative, expressed| Length = 1286 Score = 33.1 bits (66), Expect = 5.0 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +3 / -1 Query: 957 SSKSTPSKRYPRSHRKTGTTSPLSSG 1034 S+ STP + P S+ +T TTSP SSG Sbjct: 95 STSSTPGRSRPPSNSRTRTTSPPSSG 18
>LOC_Os04g18340:12004.t01577:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7743 Score = 33.1 bits (66), Expect = 5.0 Identities = 16/29 (55%), Positives = 18/29 (62%) Frame = -2 / -2 Query: 1253 LDTKTSNSTRRCNRKFN*ANY*KDYAKAQ 1167 LD TSN+TRRCN FN A + A AQ Sbjct: 1163 LDAMTSNTTRRCNTTFNKAKTE*NKAMAQ 1077
>LOC_Os02g38120:12002.t03450:unspliced-genomic photoreceptor-interacting protein-like, putative, expressed| Length = 2847 Score = 33.1 bits (66), Expect = 5.0 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 / +3 Query: 972 PSKRYPRSHRKTGTTSPLSSGIRFSGCS 1055 PS+R PR R+ G T+ SSG+ SG S Sbjct: 1011 PSRRTPRRRRRGGRTTSPSSGLTCSGAS 1094
>LOC_Os01g72790:12001.t06565:unspliced-genomic serine/threonine-protein kinase bur1, putative, expressed| Length = 3094 Score = 33.1 bits (66), Expect = 5.0 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -2 / +1 Query: 1370 VAWWWYMAARIMVAWWW 1320 ++WWW+ +R WWW Sbjct: 2656 LSWWWHGRSRWSEGWWW 2706 Score = 32.2 bits (64), Expect = 9.5 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = -2 / +1 Query: 1400 WWWYMAARIMVAWWW 1356 WWW+ +R WWW Sbjct: 2662 WWWHGRSRWSEGWWW 2706
>LOC_Os05g11560:12005.t00988:unspliced-genomic aquaporin NIP-type, putative, expressed| Length = 4985 Score = 33.1 bits (66), Expect = 5.0 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 / -2 Query: 1333 TIILAAIYHHHATIILAAIYHHHISITILVC 1425 TI+ I H I+ AI+HHH+S+ + C Sbjct: 907 TIVHRRIRIKHTLILQTAIHHHHLSLAAMSC 815
>LOC_Os04g26750:12004.t02381:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5505 Score = 33.1 bits (66), Expect = 5.0 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMML 255 GP+TRARAR+LN ++ S++ ++ E+ +L Sbjct: 1800 GPITRARARRLNLEMSSYLCSSWYKFENRLL 1892
>LOC_Os02g27450:12002.t02439:unspliced-genomic hypothetical protein| Length = 1213 Score = 33.1 bits (66), Expect = 5.0 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -1 / -2 Query: 744 CLVVEHKQRTRSCSYGELEI*TKPKSKRCPKGC 646 C V H+QR R S+GE E T P C C Sbjct: 285 CSVYRHRQRARWRSFGETETTTVPAVMACSSRC 187
>LOC_Os01g40470:12001.t03571:unspliced-genomic vacuolar ATP synthase subunit d, putative, expressed| Length = 4282 Score = 33.1 bits (66), Expect = 5.0 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +1 / +3 Query: 1315 IYHHHATIILAAIYHHH 1365 ++HHH T+IL ++HHH Sbjct: 2919 MHHHHITLILLFLHHHH 2969 Score = 33.1 bits (66), Expect = 5.0 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +1 / +3 Query: 1351 IYHHHATIILAAIYHHH 1401 ++HHH T+IL ++HHH Sbjct: 2919 MHHHHITLILLFLHHHH 2969
>LOC_Os11g22030:12011.t01873:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2602 Score = 27.6 bits (54), Expect(2) = 6.4 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -2 / -1 Query: 1253 LDTKTSNSTRRCN 1215 L+ KTSN TRRCN Sbjct: 964 LNAKTSNMTRRCN 926 Score = 22.1 bits (42), Expect(2) = 6.4 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = -1 / -2 Query: 1212 QIQLSKLLKRLCKGSDWFG 1156 Q Q SK K C G+ W G Sbjct: 924 QTQQSKN*KEQCNGTIWLG 868
>LOC_Os10g30220:12010.t02356:unspliced-genomic hypothetical protein| Length = 832 Score = 32.7 bits (65), Expect = 6.9 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +3 / +2 Query: 897 PLGVGLAIAKARRPHTFLVGSSKSTPS 977 P G GL+ + RPHT S STPS Sbjct: 92 PCGAGLSSPRRHRPHTLAPASPPSTPS 172
>LOC_Os09g29910:12009.t02669:unspliced-genomic conserved hypothetical protein| Length = 483 Score = 32.7 bits (65), Expect = 6.9 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -2 / +2 Query: 1475 GNAKSKSNRSRN*PKPKQTRMVMDIWWWYMAAR 1377 G A+ + R R + K+ R D WWW+ AR Sbjct: 239 GGARRRRRRRRRGRRRKRRRRGSDRWWWWWLAR 337
>LOC_Os09g07180:12009.t00514:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3569 Score = 32.7 bits (65), Expect = 6.9 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -2 / -1 Query: 1256 ELDTKTSNSTRRCNRKFN 1203 EL+ KTSN TR+CN K N Sbjct: 947 ELNAKTSNMTRQCNAKLN 894
>LOC_Os06g24510:12006.t02262:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3676 Score = 32.7 bits (65), Expect = 6.9 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = -2 / -1 Query: 1244 KTSNSTRRCNRKFN*ANY*KDYAKAQ 1167 K+SN TR+CNRK N A K+ A AQ Sbjct: 1132 KSSNLTRQCNRKLNKAKTEKNNAVAQ 1055
>LOC_Os03g58910:12003.t05143:unspliced-genomic expressed protein| Length = 14146 Score = 32.7 bits (65), Expect = 6.9 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = -2 / -1 Query: 1379 RIMVAWWWYMAARIMVAWWWY 1317 R+ V +WWY WWWY Sbjct: 355 RLWVGFWWYADEWRSCWWWWY 293
>LOC_Os10g07390:12010.t00597:unspliced-genomic hypothetical protein| Length = 1217 Score = 32.7 bits (65), Expect = 6.9 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +1 / +2 Query: 166 PVTRARARQLNYQVLSFIGNTSNVHEHMMLPKLDTLVVLMNEGPSMDRKDIRWSGMKHGK 345 P+TRAR +QLN V SF+ + E+ +LP ++ E R+ +R + G Sbjct: 413 PITRARTQQLNLDVSSFLCLSLYDFENRLLPNDYIMIRNNGEDKETLREGLRGVEDQQGG 592 Query: 346 QGARAGEN 369 G N Sbjct: 593 PSQYGGPN 616
>LOC_Os06g25180:12006.t02326:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4714 Score = 32.7 bits (65), Expect = 6.9 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 / +3 Query: 163 GPVTRARARQLNYQVLSFIGNTSNVHEHMMLP 258 G +TRA RQLN +V SF+ ++ E+ +LP Sbjct: 4557 GLITRAHTRQLNLEVSSFLCSSFYEFENRLLP 4652
>LOC_Os10g31420:12010.t02467:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 934 Score = 32.2 bits (64), Expect = 9.5 Identities = 8/29 (27%), Positives = 14/29 (48%) Frame = -2 / +3 Query: 1403 IWWWYMAARIMVAWWWYMAARIMVAWWWY 1317 IW W + + + WW + + WWW+ Sbjct: 426 IWLWLWSGWWLRSSWWSICSGWRTRWWWW 512
>LOC_Os10g29274:12010.t02271:unspliced-genomic expressed protein| Length = 5124 Score = 32.2 bits (64), Expect = 9.5 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = -2 / +3 Query: 1400 WWWYMAARIMVAWWWYMA 1347 W+W+ +M WWW+ A Sbjct: 384 WFWFWFGWLMCGWWWWCA 437
>LOC_Os09g03570:12009.t00254:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 6881 Score = 32.2 bits (64), Expect = 9.5 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 / -1 Query: 942 TFLVGSSKSTPSKRYPRSHRKTGTTSPLSSGIR 1040 +F V S +T S R +SH TGT+S +S+G R Sbjct: 4583 SFPVSISSTTKSTRMKKSHILTGTSSAISAG*R 4485
>LOC_Os08g15600:12008.t01434:unspliced-genomic stomatin-like protein 2, putative| Length = 411 Score = 32.2 bits (64), Expect = 9.5 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = -2 / +2 Query: 1400 WWWYMAARIMVAWWWYMA 1347 W+W+ +M WWW+ A Sbjct: 62 WFWFWFGWLMCGWWWWCA 115
>LOC_Os07g12770:12007.t01148:unspliced-genomic ANT1, putative, expressed| Length = 2863 Score = 32.2 bits (64), Expect = 9.5 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -2 / -3 Query: 437 RPKSSCSPYGGFKVRKSPREAPLFSPARAPCLPCFIP 327 RP C G + +SPR P SPA AP P +P Sbjct: 416 RPSRRCGTRRGGRAPRSPRWTPPRSPASAPTSPRPLP 306
>LOC_Os07g01970:12007.t00093:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 837 Score = 32.2 bits (64), Expect = 9.5 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -2 / -1 Query: 1400 WWWYMAARIMVAWWWY 1353 WWW+ AR WWW+ Sbjct: 324 WWWWGRAR*WWWWWWW 277 Score = 32.2 bits (64), Expect = 9.5 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -2 / -1 Query: 1364 WWWYMAARIMVAWWWY 1317 WWW+ AR WWW+ Sbjct: 324 WWWWGRAR*WWWWWWW 277
>LOC_Os05g28770:12005.t02525:unspliced-genomic expressed protein| Length = 3943 Score = 32.2 bits (64), Expect = 9.5 Identities = 9/27 (33%), Positives = 11/27 (40%) Frame = -2 / +3 Query: 1400 WWWYMAARIMVAWWWYMAARIMVAWWW 1320 W W R + WW+ R WWW Sbjct: 1785 WRWRWQCRSLRR*WWWWRRRRRCYWWW 1865
>LOC_Os04g53670:12004.t04841:unspliced-genomic expressed protein| Length = 10139 Score = 32.2 bits (64), Expect = 9.5 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +3 / +3 Query: 957 SSKSTPSKRYPRSHRKTGTTSPLSSGIRFSGCSVRF 1064 S+ S+PS S R +SP+S GIRFSG +F Sbjct: 243 STGSSPSPATSSSCRAAPRSSPISVGIRFSG*GCQF 350
>LOC_Os03g19600:12003.t01725:unspliced-genomic PE_PGRS family protein, putative, expressed| Length = 2044 Score = 32.2 bits (64), Expect = 9.5 Identities = 8/31 (25%), Positives = 13/31 (41%) Frame = -2 / +3 Query: 1397 WWYMAARIMVAWWWYMAARIMVAWWWYMMKY 1305 WW+ R WW + WWW+ ++ Sbjct: 612 WWWCRWRWRTWWWCWRRTWRWSRWWWWCRRW 704
>LOC_Os02g24354:12002.t02132:unspliced-genomic diaminopimelate decarboxylase, putative, expressed| Length = 7645 Score = 32.2 bits (64), Expect = 9.5 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +1 / -1 Query: 655 RAPFRLGFCLDFKFAIAATSRSLFVFYDQ 741 R P+ LGFC + F +A T L V YD+ Sbjct: 2509 RKPYYLGFC*NLHFFVAKTEGELPVLYDK 2423 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 511,964,306 Number of extensions: 7940360 Number of successful extensions: 38389 Number of sequences better than 10.0: 232 Length of query: 503 Length of database: 55,613,886 Length adjustment: 51 Effective length of query: 452 Effective length of database: 52,743,708 Effective search space: 23840156016 Effective search space used: 23840156016 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
