>P36027:MID2_YEAST Cell wall integrity sensor MID2 precursor - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 376
 Score = 34.3 bits (77), Expect = 0.76
 Identities = 31/100 (31%), Positives = 46/100 (46%)
 Frame = -2

Query: 533 SSASHRSESISMVSTASNSLAFSASRMKSADTSGNITERDSTTARWXXXXXXXXXXPFDD 354
           S+ S    S+S VS++S+ L+ S     SAD+S   +   ST++R               
Sbjct: 37  SAVSTARSSVSRVSSSSSILSSSMVSSSSADSSSLTS---STSSR------SLVSHTSSS 87

Query: 353 DSVEMLIFPRLSA*SSKERDSGSSYPADLSAVSLFSVSST 234
            S+  + F   S  S     S SS  +D S+ S FS+SST
Sbjct: 88  TSIASISFTSFSFSSDSSTSSSSSASSDSSSSSSFSISST 127

>Q8IWZ8:SF04_HUMAN Splicing factor 4 - Homo sapiens (Human)|
          Length = 645

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = -2

Query: 929 PHTGELSNA*VHETSAAHGTRFSNSGV*TATPKELYNLQPRITMRQTPTNRPAIPPGI*N 750
           PH GE++NA     S+    +F+N G   +  ++   LQ   T    PT+ P+ PP    
Sbjct: 65  PHPGEITNA---HNSSCISNKFANDG---SFLQQFLKLQKAQTSTDAPTSAPSAPPSTPT 118

Query: 749 PN 744
           P+
Sbjct: 119 PS 120

>Q4UMY2:RMUC_RICFE DNA recombination protein rmuC homolog - Rickettsia felis|
           (Rickettsia azadi)
          Length = 428

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 22/61 (36%), Positives = 32/61 (52%)
 Frame = +1

Query: 145 KLNPDAAPFVPASKSPFAESLKGKKDPEKQVDETEKSETADKSAGYELPESLSFDDYAES 324
           KL PDA  F+P+      +S    K  +  VDE + S    K+  Y L +SL+  DYAE+
Sbjct: 204 KLRPDALIFLPSGNLMVIDS----KASKFLVDEQDNSGNLSKTMNYHL-KSLANKDYAEN 258

Query: 325 L 327
           +
Sbjct: 259 I 259

>Q1RJ81:RMUC_RICBR DNA recombination protein rmuC homolog - Rickettsia bellii (strain|
           RML369-C)
          Length = 428

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 22/61 (36%), Positives = 32/61 (52%)
 Frame = +1

Query: 145 KLNPDAAPFVPASKSPFAESLKGKKDPEKQVDETEKSETADKSAGYELPESLSFDDYAES 324
           KL PDA  F+P+      +S    K  +  VDE + S    K+  Y L +SL+  DYAE+
Sbjct: 204 KLRPDALIFLPSGNLMVIDS----KASKFLVDEQDNSGNLSKTMNYHL-KSLANKDYAEN 258

Query: 325 L 327
           +
Sbjct: 259 I 259

>P75134:Y657_MYCPN Uncharacterized protein MG443 homolog - Mycoplasma pneumoniae|
          Length = 401

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 232 ASQGPSFLSSSPRTETWRQARKERHLDST*KTAPLLW 122
           A+Q PS LS+   TE W  A+K   +D +    P LW
Sbjct: 152 ANQLPSMLSAVHHTEFWEDAKKAEGVDQSALFVPFLW 188

>Q0P4Q0:RA16L_XENTR RAI16-like protein - Xenopus tropicalis (Western clawed frog)|
           (Silurana tropicalis)
          Length = 698

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -2

Query: 566 GFPDTSAE*PLSSASHRSESISMVSTASNSLAFSASRMKSADT 438
           GFPDT    P S  +HR+E         + L+     +KS+DT
Sbjct: 484 GFPDTGIRLPRSDNAHRTEPAGTEQWVKSFLSLVPEEIKSSDT 526

>Q8JMI6:NCAP_IBVSA Nucleocapsid protein - Avian infectious bronchitis virus (strain|
           SAIB20) (IBV)
          Length = 409

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 178 ASKSPFAESLKGKKDPEKQVDETEKSETADKSAGYELPESLSFDD 312
           +S +P  + LK +K P+KQ DE +K+ T+D+         L FDD
Sbjct: 351 SSPAPRQQRLKKEKRPKKQDDEVDKALTSDEERN---NAQLEFDD 392

>P32923:NCAP_IBVG Nucleocapsid protein - Avian infectious bronchitis virus (strain|
           Gray) (IBV)
          Length = 409

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 178 ASKSPFAESLKGKKDPEKQVDETEKSETADKSAGYELPESLSFDD 312
           +S +P  + LK +K P+KQ DE +K+ T+D+         L FDD
Sbjct: 351 SSPAPRQQRLKKEKRPKKQDDEVDKALTSDEERN---NAQLEFDD 392

>Q9PZ51:NCAP_CVTIN Nucleocapsid protein - Turkey coronavirus (strain Indiana) (TCoV)|
           (TCV)
          Length = 409

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 181 SKSPFAESLKGKKDPEKQVDETEKSETADKSAGYELPESLSFDD 312
           S +P  + LK +K P+KQ DE +K+ T+D+         L FDD
Sbjct: 352 SPAPRQQRLKKEKKPKKQDDEVDKALTSDEERN---NAQLEFDD 392


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 145,140,896
Number of extensions: 2908966
Number of successful extensions: 8131
Number of sequences better than 10.0: 9
Number of HSP's gapped: 8129
Number of HSP's successfully gapped: 9
Length of query: 317
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 204
Effective length of database: 69,691,104
Effective search space: 14216985216
Effective search space used: 14216985216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)