ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf80c15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001071213.1| Oryza sativa (japonica cultivar-group) Os10g... 78 6e-11
2gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome... 78 6e-11
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 78 6e-11
4gb|AF383878.1|AF383878 Oryza sativa soluble starch synthase II-1... 78 6e-11
5gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) ch... 78 6e-11
6dbj|AK072339.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 6e-11
7emb|CT830277.1| Oryza sativa (indica cultivar-group) cDNA clone:... 64 9e-07
8ref|NM_001055019.1| Oryza sativa (japonica cultivar-group) Os02g... 64 9e-07
9ref|NM_001055016.1| Oryza sativa (japonica cultivar-group) Os02g... 64 9e-07
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 64 9e-07
11dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic D... 64 9e-07
12dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic D... 64 9e-07
13dbj|AK110304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 9e-07
14dbj|AK098981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 9e-07
15dbj|AK060823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 9e-07
16ref|NM_001055017.1| Oryza sativa (japonica cultivar-group) Os02g... 62 3e-06
17ref|NM_001055015.1| Oryza sativa (japonica cultivar-group) Os02g... 46 0.21
18ref|NM_001054639.1| Oryza sativa (japonica cultivar-group) Os02g... 46 0.21
19gb|BT018973.1| Zea mays clone Contig385.F mRNA sequence 46 0.21
20gb|AF395537.1|AF395537 Oryza sativa soluble starch synthase II-2... 46 0.21
21dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.21
22dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.21
23dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.21
24dbj|AB127938.1| Phaseolus vulgaris pvss22 mRNA for starch syntha... 46 0.21
25dbj|AK066446.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.21
26emb|AJ308110.1|OSA308110 Oryza sativa mRNA for soluble starch sy... 46 0.21
27gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genom... 44 0.82
28gb|AY225862.1| Colocasia esculenta soluble starch synthase II (S... 44 0.82
29gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genom... 44 0.82
30gb|AC131700.3| Mus musculus BAC clone RP24-67N3 from chromosome ... 44 0.82
31dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.82
32dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.82
33dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.82
34dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.82
35dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.82
36emb|CT836562.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 3.2
37emb|CT837957.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 3.2
38emb|CT033808.5| Zebrafish DNA sequence from clone CH211-105H17 i... 42 3.2
39emb|BX950868.13| Zebrafish DNA sequence from clone DKEY-54I3 in ... 42 3.2
40gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 3.2
41emb|CR749167.8| Zebrafish DNA sequence from clone DKEY-23A17 in ... 42 3.2
42emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in ... 42 3.2 
>ref|NM_001071213.1| Oryza sativa (japonica cultivar-group) Os10g0437600 (Os10g0437600)
           mRNA, complete cds
          Length = 2903
 Score = 77.8 bits (39), Expect = 6e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 470 aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
           |||||| ||||| |||||||||||||||||||| ||||||||| | | ||||||||| ||
Sbjct: 904 aggtgggcttggagatgttgctggagctttgccaaaggctttggctaggagaggtcaccg 963

                  
Query: 530 tgtcatg 536
           |||||||
Sbjct: 964 tgtcatg 970
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>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17,
             complete sequence
          Length = 141041

 Score = 77.8 bits (39), Expect = 6e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                         
Query: 470   aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
             |||||| ||||| |||||||||||||||||||| ||||||||| | | ||||||||| ||
Sbjct: 16608 aggtgggcttggagatgttgctggagctttgccaaaggctttggctaggagaggtcaccg 16667

                    
Query: 530   tgtcatg 536
             |||||||
Sbjct: 16668 tgtcatg 16674
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 77.8 bits (39), Expect = 6e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 470      aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
                |||||| ||||| |||||||||||||||||||| ||||||||| | | ||||||||| ||
Sbjct: 15162909 aggtgggcttggagatgttgctggagctttgccaaaggctttggctaggagaggtcaccg 15162968

                       
Query: 530      tgtcatg 536
                |||||||
Sbjct: 15162969 tgtcatg 15162975
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>gb|AF383878.1|AF383878 Oryza sativa soluble starch synthase II-1 mRNA, complete cds
          Length = 2903

 Score = 77.8 bits (39), Expect = 6e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 470 aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
           |||||| ||||| |||||||||||||||||||| ||||||||| | | ||||||||| ||
Sbjct: 904 aggtgggcttggagatgttgctggagctttgccaaaggctttggctaggagaggtcaccg 963

                  
Query: 530 tgtcatg 536
           |||||||
Sbjct: 964 tgtcatg 970
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>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11,
             complete sequence
          Length = 129420

 Score = 77.8 bits (39), Expect = 6e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                         
Query: 470   aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
             |||||| ||||| |||||||||||||||||||| ||||||||| | | ||||||||| ||
Sbjct: 71522 aggtgggcttggagatgttgctggagctttgccaaaggctttggctaggagaggtcaccg 71581

                    
Query: 530   tgtcatg 536
             |||||||
Sbjct: 71582 tgtcatg 71588
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>dbj|AK072339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045E09, full
            insert sequence
          Length = 4987

 Score = 77.8 bits (39), Expect = 6e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                        
Query: 470  aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
            |||||| ||||| |||||||||||||||||||| ||||||||| | | ||||||||| ||
Sbjct: 1676 aggtgggcttggagatgttgctggagctttgccaaaggctttggctaggagaggtcaccg 1735

                   
Query: 530  tgtcatg 536
            |||||||
Sbjct: 1736 tgtcatg 1742
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>emb|CT830277.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN087N12, full
           insert sequence
          Length = 761

 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 168 cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
           ||||||| | |||||||| ||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 177 cgccgccgtctccccggcgttccgcgccgccgccgactccgacgccgtctgggctagctt 236

               
Query: 228 cctg 231
           ||||
Sbjct: 237 cctg 240



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 356 atgtggttggacagggagaccggtgccaagtgctacatg 394
           |||||||||||||||||||| || |||||||||||||||
Sbjct: 358 atgtggttggacagggagactggggccaagtgctacatg 396
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>ref|NM_001055019.1| Oryza sativa (japonica cultivar-group) Os02g0813300 (Os02g0813300)
           mRNA, complete cds
          Length = 1168

 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 168 cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
           ||||||| | |||||||| ||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 191 cgccgccgtctccccggcgttccgcgccgccgccgactccgacgccgtctgggctagctt 250

               
Query: 228 cctg 231
           ||||
Sbjct: 251 cctg 254



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 356 atgtggttggacagggagaccggtgccaagtgctacatg 394
           |||||||||||||||||||| || |||||||||||||||
Sbjct: 372 atgtggttggacagggagactggggccaagtgctacatg 410
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>ref|NM_001055016.1| Oryza sativa (japonica cultivar-group) Os02g0813000 (Os02g0813000)
           mRNA, complete cds
          Length = 591

 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 168 cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
           ||||||| | |||| ||||||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 111 cgccgccgtctcccgggccttccgcgccgccgccgactccgacgccgtctgggctagctt 170

               
Query: 228 cctg 231
           ||||
Sbjct: 171 cctg 174



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 292 tccaagaaggaactcttcctctgcctttccgccggcc 328
           ||||||||||| ||||||||| |||| ||||||||||
Sbjct: 226 tccaagaaggacctcttcctccgcctctccgccggcc 262
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                            
Query: 168      cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
                ||||||| | |||| ||||||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 34836362 cgccgccgtctcccgggccttccgcgccgccgccgactccgacgccgtctgggctagctt 34836421

                    
Query: 228      cctg 231
                ||||
Sbjct: 34836422 cctg 34836425



 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                            
Query: 168      cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
                ||||||| | |||||||| ||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 34852568 cgccgccgtctccccggcgttccgcgccgccgccgactccgacgccgtctgggctagctt 34852627

                    
Query: 228      cctg 231
                ||||
Sbjct: 34852628 cctg 34852631



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 178      tccccggccttccgcgccgcagccgactccgacga 212
                |||||||||||||||||||| ||||||||||||||
Sbjct: 34843366 tccccggccttccgcgccgccgccgactccgacga 34843400



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 356      atgtggttggacagggagaccggtgccaagtgctacatg 394
                |||||||||||||||||||| || |||||||||||||||
Sbjct: 34852874 atgtggttggacagggagactggggccaagtgctacatg 34852912



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 354      gcatgtggttggacagggagaccggtgccaagtgcta 390
                ||||||| ||||||||||||||||| |||||||||||
Sbjct: 34837156 gcatgtgattggacagggagaccggggccaagtgcta 34837192



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 354      gcatgtggttggacagggagaccggtgccaagtgctacatg 394
                |||||||||||||||||||||  || |||||||||||||||
Sbjct: 34840229 gcatgtggttggacagggagaagggcgccaagtgctacatg 34840269



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 354      gcatgtggttggacagggagaccggtgccaagtgcta 390
                |||||||||||||||||| |||||| |||| ||||||
Sbjct: 34820931 gcatgtggttggacagggggaccggggccaggtgcta 34820967



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 292      tccaagaaggaactcttcctctgcctttccgccggcc 328
                ||||||||||| ||||||||| |||| ||||||||||
Sbjct: 34836477 tccaagaaggacctcttcctccgcctctccgccggcc 34836513



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 354      gcatgtggttggacagggagaccggtgccaagtgcta 390
                |||| ||||| |||||||||||||| |||||||||||
Sbjct: 34843641 gcatctggttcgacagggagaccggggccaagtgcta 34843677



 Score = 48.1 bits (24), Expect = 0.053
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 168      cgccgccatttccccggccttccgcgccgcagccgactccgacg 211
                ||||||| | ||||||||||||||||||   |||||||||||||
Sbjct: 34820663 cgccgccgtctccccggccttccgcgccatcgccgactccgacg 34820706



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                            
Query: 470      aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
                |||||| ||||| |||||||  || ||||||||||||||| || |||  ||||| |||||
Sbjct: 31255236 aggtggtcttggagatgttgtgggtgctttgcctaaggctctggcaagaagaggacatcg 31255177

                   
Query: 530      tgt 532
                |||
Sbjct: 31255176 tgt 31255174



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 107      gagatcgcgcgcctgccggagga 129
                |||||||||||||||||||||||
Sbjct: 34816804 gagatcgcgcgcctgccggagga 34816826



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 107      gagatcgcgcgcctgccggagga 129
                |||||||||||||||||||||||
Sbjct: 34839873 gagatcgcgcgcctgccggagga 34839895



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 356      atgtggttggacagggagaccggtgccaagtgctacatg 394
                |||||||||||||||||||| |||   ||||||||||||
Sbjct: 34841663 atgtggttggacagggagactggttttaagtgctacatg 34841701



 Score = 44.1 bits (22), Expect = 0.82
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 533     catgtctcatgcagacattata 554
               ||||||||||||||||||||||
Sbjct: 6722083 catgtctcatgcagacattata 6722104



 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 186      cttccgcgccgcagccgactccgacg 211
                |||||||||||| |||||||||||||
Sbjct: 34816896 cttccgcgccgccgccgactccgacg 34816921



 Score = 42.1 bits (21), Expect = 3.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 354      gcatgtggttggacagggagaccggtgccaagtgctacatg 394
                ||||||||||||| |||||||  || | |||||||||||||
Sbjct: 34817217 gcatgtggttggagagggagaagggcggcaagtgctacatg 34817257
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>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0053L11
          Length = 147123

 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 168   cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
             ||||||| | |||| ||||||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 57957 cgccgccgtctcccgggccttccgcgccgccgccgactccgacgccgtctgggctagctt 58016

                 
Query: 228   cctg 231
             ||||
Sbjct: 58017 cctg 58020



 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 168   cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
             ||||||| | |||||||| ||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 74163 cgccgccgtctccccggcgttccgcgccgccgccgactccgacgccgtctgggctagctt 74222

                 
Query: 228   cctg 231
             ||||
Sbjct: 74223 cctg 74226



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 178   tccccggccttccgcgccgcagccgactccgacga 212
             |||||||||||||||||||| ||||||||||||||
Sbjct: 64961 tccccggccttccgcgccgccgccgactccgacga 64995



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 356   atgtggttggacagggagaccggtgccaagtgctacatg 394
             |||||||||||||||||||| || |||||||||||||||
Sbjct: 74469 atgtggttggacagggagactggggccaagtgctacatg 74507



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 354   gcatgtggttggacagggagaccggtgccaagtgcta 390
             ||||||| ||||||||||||||||| |||||||||||
Sbjct: 58751 gcatgtgattggacagggagaccggggccaagtgcta 58787



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 354   gcatgtggttggacagggagaccggtgccaagtgctacatg 394
             |||||||||||||||||||||  || |||||||||||||||
Sbjct: 61824 gcatgtggttggacagggagaagggcgccaagtgctacatg 61864



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 354   gcatgtggttggacagggagaccggtgccaagtgcta 390
             |||||||||||||||||| |||||| |||| ||||||
Sbjct: 42526 gcatgtggttggacagggggaccggggccaggtgcta 42562



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 292   tccaagaaggaactcttcctctgcctttccgccggcc 328
             ||||||||||| ||||||||| |||| ||||||||||
Sbjct: 58072 tccaagaaggacctcttcctccgcctctccgccggcc 58108



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 354   gcatgtggttggacagggagaccggtgccaagtgcta 390
             |||| ||||| |||||||||||||| |||||||||||
Sbjct: 65236 gcatctggttcgacagggagaccggggccaagtgcta 65272



 Score = 48.1 bits (24), Expect = 0.053
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 168   cgccgccatttccccggccttccgcgccgcagccgactccgacg 211
             ||||||| | ||||||||||||||||||   |||||||||||||
Sbjct: 42258 cgccgccgtctccccggccttccgcgccatcgccgactccgacg 42301



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 107   gagatcgcgcgcctgccggagga 129
             |||||||||||||||||||||||
Sbjct: 38399 gagatcgcgcgcctgccggagga 38421



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 107   gagatcgcgcgcctgccggagga 129
             |||||||||||||||||||||||
Sbjct: 61468 gagatcgcgcgcctgccggagga 61490



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 356   atgtggttggacagggagaccggtgccaagtgctacatg 394
             |||||||||||||||||||| |||   ||||||||||||
Sbjct: 63258 atgtggttggacagggagactggttttaagtgctacatg 63296



 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 186   cttccgcgccgcagccgactccgacg 211
             |||||||||||| |||||||||||||
Sbjct: 38491 cttccgcgccgccgccgactccgacg 38516



 Score = 42.1 bits (21), Expect = 3.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 354   gcatgtggttggacagggagaccggtgccaagtgctacatg 394
             ||||||||||||| |||||||  || | |||||||||||||
Sbjct: 38812 gcatgtggttggagagggagaagggcggcaagtgctacatg 38852
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>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_E04
          Length = 118192

 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 168   cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
             ||||||| | |||||||| ||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 12065 cgccgccgtctccccggcgttccgcgccgccgccgactccgacgccgtctgggctagctt 12124

                 
Query: 228   cctg 231
             ||||
Sbjct: 12125 cctg 12128



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 178  tccccggccttccgcgccgcagccgactccgacga 212
            |||||||||||||||||||| ||||||||||||||
Sbjct: 2863 tccccggccttccgcgccgccgccgactccgacga 2897



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 356   atgtggttggacagggagaccggtgccaagtgctacatg 394
             |||||||||||||||||||| || |||||||||||||||
Sbjct: 12371 atgtggttggacagggagactggggccaagtgctacatg 12409



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 354  gcatgtggttggacagggagaccggtgccaagtgcta 390
            |||| ||||| |||||||||||||| |||||||||||
Sbjct: 3138 gcatctggttcgacagggagaccggggccaagtgcta 3174



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 356  atgtggttggacagggagaccggtgccaagtgctacatg 394
            |||||||||||||||||||| |||   ||||||||||||
Sbjct: 1160 atgtggttggacagggagactggttttaagtgctacatg 1198
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>dbj|AK110304.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-A09, full
            insert sequence
          Length = 2585

 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                        
Query: 168  cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
            ||||||| | |||| ||||||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 1584 cgccgccgtctcccgggccttccgcgccgccgccgactccgacgccgtctgggctagctt 1643

                
Query: 228  cctg 231
            ||||
Sbjct: 1644 cctg 1647



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                 
Query: 354  gcatgtggttggacagggagaccggtgccaagtgcta 390
            ||||||| ||||||||||||||||| |||||||||||
Sbjct: 1766 gcatgtgattggacagggagaccggggccaagtgcta 1802



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 292  tccaagaaggaactcttcctctgcctttccgccggcc 328
            ||||||||||| ||||||||| |||| ||||||||||
Sbjct: 1699 tccaagaaggacctcttcctccgcctctccgccggcc 1735
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>dbj|AK098981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092F18, full
           insert sequence
          Length = 1080

 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 168 cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
           ||||||| | |||||||| ||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 113 cgccgccgtctccccggcgttccgcgccgccgccgactccgacgccgtctgggctagctt 172

               
Query: 228 cctg 231
           ||||
Sbjct: 173 cctg 176



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 356 atgtggttggacagggagaccggtgccaagtgctacatg 394
           |||||||||||||||||||| || |||||||||||||||
Sbjct: 294 atgtggttggacagggagactggggccaagtgctacatg 332
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>dbj|AK060823.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B03, full
           insert sequence
          Length = 1168

 Score = 63.9 bits (32), Expect = 9e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 168 cgccgccatttccccggccttccgcgccgcagccgactccgacgatatctgggcgagctt 227
           ||||||| | |||||||| ||||||||||| |||||||||||||   ||||||| |||||
Sbjct: 191 cgccgccgtctccccggcgttccgcgccgccgccgactccgacgccgtctgggctagctt 250

               
Query: 228 cctg 231
           ||||
Sbjct: 251 cctg 254



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 356 atgtggttggacagggagaccggtgccaagtgctacatg 394
           |||||||||||||||||||| || |||||||||||||||
Sbjct: 372 atgtggttggacagggagactggggccaagtgctacatg 410
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>ref|NM_001055017.1| Oryza sativa (japonica cultivar-group) Os02g0813100 (Os02g0813100)
            mRNA, complete cds
          Length = 1932

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 178  tccccggccttccgcgccgcagccgactccgacga 212
            |||||||||||||||||||| ||||||||||||||
Sbjct: 1252 tccccggccttccgcgccgccgccgactccgacga 1286



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 354 gcatgtggttggacagggagaccggtgccaagtgctacatg 394
           |||||||||||||||||||||  || |||||||||||||||
Sbjct: 269 gcatgtggttggacagggagaagggcgccaagtgctacatg 309



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 354  gcatgtggttggacagggagaccggtgccaagtgcta 390
            |||| ||||| |||||||||||||| |||||||||||
Sbjct: 1430 gcatctggttcgacagggagaccggggccaagtgcta 1466



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 107 gagatcgcgcgcctgccggagga 129
           |||||||||||||||||||||||
Sbjct: 34  gagatcgcgcgcctgccggagga 56



 Score = 46.1 bits (23), Expect = 0.21
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 356 atgtggttggacagggagaccggtgccaagtgctacatg 394
           |||||||||||||||||||| |||   ||||||||||||
Sbjct: 703 atgtggttggacagggagactggttttaagtgctacatg 741
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>ref|NM_001055015.1| Oryza sativa (japonica cultivar-group) Os02g0812600 (Os02g0812600)
           mRNA, complete cds
          Length = 1473

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 107 gagatcgcgcgcctgccggagga 129
           |||||||||||||||||||||||
Sbjct: 31  gagatcgcgcgcctgccggagga 53



 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 186 cttccgcgccgcagccgactccgacg 211
           |||||||||||| |||||||||||||
Sbjct: 123 cttccgcgccgccgccgactccgacg 148



 Score = 42.1 bits (21), Expect = 3.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 354 gcatgtggttggacagggagaccggtgccaagtgctacatg 394
           ||||||||||||| |||||||  || | |||||||||||||
Sbjct: 284 gcatgtggttggagagggagaagggcggcaagtgctacatg 324
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>ref|NM_001054639.1| Oryza sativa (japonica cultivar-group) Os02g0744700 (Os02g0744700)
           mRNA, partial cds
          Length = 2644

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 470 aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
           |||||| ||||| |||||||  || ||||||||||||||| || |||  ||||| |||||
Sbjct: 788 aggtggtcttggagatgttgtgggtgctttgcctaaggctctggcaagaagaggacatcg 847

              
Query: 530 tgt 532
           |||
Sbjct: 848 tgt 850
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>gb|BT018973.1| Zea mays clone Contig385.F mRNA sequence
          Length = 1282

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 354 gcatgtggttggacagggagaccggtgccaagtgctacatgatatccgtcaggaa 408
           |||||||| |||||||||  ||||  ||||||||||||||| | |||| ||||||
Sbjct: 410 gcatgtggctggacagggccaccgtggccaagtgctacatgctgtccgccaggaa 464
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>gb|AF395537.1|AF395537 Oryza sativa soluble starch synthase II-2 mRNA, complete cds
          Length = 2394

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 470 aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
           |||||| ||||| |||||||  || ||||||||||||||| || |||  ||||| |||||
Sbjct: 687 aggtggtcttggagatgttgtgggtgctttgcctaaggctctggcaagaagaggacatcg 746

              
Query: 530 tgt 532
           |||
Sbjct: 747 tgt 749
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>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0016F11
          Length = 134907

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 107    gagatcgcgcgcctgccggagga 129
              |||||||||||||||||||||||
Sbjct: 134652 gagatcgcgcgcctgccggagga 134674



 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 186    cttccgcgccgcagccgactccgacg 211
              |||||||||||| |||||||||||||
Sbjct: 134744 cttccgcgccgccgccgactccgacg 134769
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>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1734_E02
          Length = 168566

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                          
Query: 470    aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
              |||||| ||||| |||||||  || ||||||||||||||| || |||  ||||| |||||
Sbjct: 135079 aggtggtcttggagatgttgtgggtgctttgcctaaggctctggcaagaagaggacatcg 135020

                 
Query: 530    tgt 532
              |||
Sbjct: 135019 tgt 135017
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>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1118_G04
          Length = 134464

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 470   aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
             |||||| ||||| |||||||  || ||||||||||||||| || |||  ||||| |||||
Sbjct: 25104 aggtggtcttggagatgttgtgggtgctttgcctaaggctctggcaagaagaggacatcg 25045

                
Query: 530   tgt 532
             |||
Sbjct: 25044 tgt 25042
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>dbj|AB127938.1| Phaseolus vulgaris pvss22 mRNA for starch synthase II-2 precursor,
           complete cds
          Length = 2486

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 470 aggtggacttggggatgttgctggagctttgcctaaggctttg 512
           |||||| ||||| |||||||||||| | || ||||||||||||
Sbjct: 824 aggtgggcttggagatgttgctggatcattacctaaggctttg 866
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>dbj|AK066446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060C10, full
           insert sequence
          Length = 2645

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 470 aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
           |||||| ||||| |||||||  || ||||||||||||||| || |||  ||||| |||||
Sbjct: 789 aggtggtcttggagatgttgtgggtgctttgcctaaggctctggcaagaagaggacatcg 848

              
Query: 530 tgt 532
           |||
Sbjct: 849 tgt 851
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>emb|AJ308110.1|OSA308110 Oryza sativa mRNA for soluble starch synthase 2 (ss2 gene)
          Length = 2319

 Score = 46.1 bits (23), Expect = 0.21
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 470 aggtggacttggggatgttgctggagctttgcctaaggctttgtcaaagagaggtcatcg 529
           |||||| ||||| |||||||  || ||||||||||||||| || |||  ||||| |||||
Sbjct: 483 aggtggtcttggagatgttgtgggtgctttgcctaaggctctggcaagaagaggacatcg 542

              
Query: 530 tgt 532
           |||
Sbjct: 543 tgt 545
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>gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genomic sequence, complete
             sequence
          Length = 131589

 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 793   caatcttgtagaacaaaaacaaataa 818
             |||| |||||||||||||||||||||
Sbjct: 95291 caatgttgtagaacaaaaacaaataa 95316
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>gb|AY225862.1| Colocasia esculenta soluble starch synthase II (SSSII) mRNA, complete
            cds
          Length = 2939

 Score = 44.1 bits (22), Expect = 0.82
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 471  ggtggacttggggatgttgctggagctttgcctaaggc 508
            ||||| ||||| ||||||||||||||||| || |||||
Sbjct: 1204 ggtgggcttggagatgttgctggagctttaccaaaggc 1241
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>gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genomic sequence,
            complete sequence
          Length = 142896

 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 793  caatcttgtagaacaaaaacaaataa 818
            |||| |||||||||||||||||||||
Sbjct: 1382 caatgttgtagaacaaaaacaaataa 1407
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>gb|AC131700.3| Mus musculus BAC clone RP24-67N3 from chromosome 6, complete sequence
          Length = 197050

 Score = 44.1 bits (22), Expect = 0.82
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 804   aacaaaaacaaataaagtgcat 825
             ||||||||||||||||||||||
Sbjct: 27031 aacaaaaacaaataaagtgcat 27052
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 186      cttccgcgccgcagccgactccgacg 211
                |||||||||||| |||||||||||||
Sbjct: 15323950 cttccgcgccgccgccgactccgacg 15323975



 Score = 42.1 bits (21), Expect = 3.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 101      gcttgggagatcgcgcgcctgccggagga 129
                ||||| |||||||||||||| ||||||||
Sbjct: 15323874 gcttgcgagatcgcgcgccttccggagga 15323902
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 793      caatcttgtagaacaaaaacaaataa 818
                |||| |||||||||||||||||||||
Sbjct: 18014451 caatgttgtagaacaaaaacaaataa 18014426



 Score = 42.1 bits (21), Expect = 3.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 795   atcttgtagaacaaaaacaaataaa 819
             |||||||||||| ||||||||||||
Sbjct: 56813 atcttgtagaaccaaaacaaataaa 56837
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>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0062G05
          Length = 152802

 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 186    cttccgcgccgcagccgactccgacg 211
              |||||||||||| |||||||||||||
Sbjct: 109581 cttccgcgccgccgccgactccgacg 109606



 Score = 42.1 bits (21), Expect = 3.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 101    gcttgggagatcgcgcgcctgccggagga 129
              ||||| |||||||||||||| ||||||||
Sbjct: 109505 gcttgcgagatcgcgcgccttccggagga 109533
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>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1131G07
          Length = 133992

 Score = 44.1 bits (22), Expect = 0.82
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 533   catgtctcatgcagacattata 554
             ||||||||||||||||||||||
Sbjct: 43136 catgtctcatgcagacattata 43157
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>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1790_D02
          Length = 162928

 Score = 44.1 bits (22), Expect = 0.82
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 186  cttccgcgccgcagccgactccgacg 211
            |||||||||||| |||||||||||||
Sbjct: 9526 cttccgcgccgccgccgactccgacg 9551



 Score = 42.1 bits (21), Expect = 3.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 101  gcttgggagatcgcgcgcctgccggagga 129
            ||||| |||||||||||||| ||||||||
Sbjct: 9450 gcttgcgagatcgcgcgccttccggagga 9478
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>emb|CT836562.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA219I21, full
           insert sequence
          Length = 1125

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 292 tccaagaaggaactcttcctctgcctttccgccggcc 328
           ||||||||||| | ||||||| |||| ||||||||||
Sbjct: 293 tccaagaaggagcgcttcctccgcctctccgccggcc 329
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>emb|CT837957.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122O21, full
           insert sequence
          Length = 2287

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 292 tccaagaaggaactcttcctctgcctttccgccggcc 328
           ||||||||||| | ||||||| |||| ||||||||||
Sbjct: 290 tccaagaaggagcgcttcctccgcctctccgccggcc 326
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>emb|CT033808.5| Zebrafish DNA sequence from clone CH211-105H17 in linkage group 1,
             complete sequence
          Length = 68463

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 794   aatcttgtagaacaaaaacaa 814
             |||||||||||||||||||||
Sbjct: 55275 aatcttgtagaacaaaaacaa 55295
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>emb|BX950868.13| Zebrafish DNA sequence from clone DKEY-54I3 in linkage group 5, complete
              sequence
          Length = 204339

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 799    tgtagaacaaaaacaaataaa 819
              |||||||||||||||||||||
Sbjct: 204176 tgtagaacaaaaacaaataaa 204156
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>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 795   atcttgtagaacaaaaacaaataaa 819
             |||||||||||| ||||||||||||
Sbjct: 68405 atcttgtagaaccaaaacaaataaa 68381
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>emb|CR749167.8| Zebrafish DNA sequence from clone DKEY-23A17 in linkage group 5,
            complete sequence
          Length = 155288

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 799  tgtagaacaaaaacaaataaa 819
            |||||||||||||||||||||
Sbjct: 1837 tgtagaacaaaaacaaataaa 1817
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>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete
              sequence
          Length = 169530

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 794    aatcttgtagaacaaaaacaa 814
              |||||||||||||||||||||
Sbjct: 135463 aatcttgtagaacaaaaacaa 135483


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 155,346,326
Number of extensions: 8532863
Number of successful extensions: 171973
Number of sequences better than 10.0: 42
Number of HSP's gapped: 171973
Number of HSP's successfully gapped: 94
Length of query: 860
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 838
Effective length of database: 18,508,616,841
Effective search space: 15510220912758
Effective search space used: 15510220912758
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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