ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf80b16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK069001:Os06g0340200 | 248 | 1e-65 | 2 | AK105914:Os04g0105100 | 195 | 9e-50 | 3 | AK071063:Os04g0105100 | 195 | 9e-50 | 4 | AK100432:Os06g0677300 | 165 | 8e-41 | 5 | AK101610:Os02g0165000 | 165 | 1e-40 | 6 | AK069562:Os02g0165000 | 165 | 1e-40 | 7 | AK104023:Os05g0207400 | 58 | 2e-08 | 8 | AK070191:Os05g0207400 | 58 | 2e-08 | 9 | AK121474:Os01g0731800 | 55 | 1e-07 | 10 | AK073368:Os04g0692300 | 53 | 7e-07 | 11 | AK102413:Os05g0452800 | 49 | 1e-05 | 12 | AK073332:Os01g0894600 | 42 | 0.001 | 13 | AK107568:Os05g0552400 | 41 | 0.002 | 14 | AK071098:Os11g0600700 | 41 | 0.002 | 15 | AK061258:Os11g0600700 | 41 | 0.002 | 16 | AK071857:Os08g0436200 | 40 | 0.004 | 17 | AK071239:Os02g0577100 | 40 | 0.004 | 18 | AK108601:Os01g0121200 | 40 | 0.006 | 19 | Os05g0355300:Os05g0355300 | 39 | 0.014 | 20 | AK099496:Os01g0303600 | 39 | 0.014 | 21 | AK099522:Os01g0894600 | 35 | 0.20 | 22 | AK102470:Os06g0639100 | 32 | 1.7 | 23 | AK066236:Os04g0337000 | 29 | 8.5 |
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>AK069001:Os06g0340200 | Length = 497 Score = 248 bits (632), Expect = 1e-65 Identities = 154/315 (48%), Positives = 174/315 (55%), Gaps = 7/315 (2%) Frame = +1 Query: 460 VCRTQSLPMTSISRRLPAPHGHHRKRVADSSSLRRFRVXXXXXXXXXXXXXXXXXXXXXX 639 + R+QS+PM+++SR + G KRVADSSSLR Sbjct: 165 ISRSQSVPMSTLSR-FSSKGGGGSKRVADSSSLRIHDGGSVRFRVSVIGASPPDGNADAA 223 Query: 640 XXXXXXXXXXXXXXXXXXXXVCRICMVALCXXXXXXXXXXXXXXXVVLKLECRCKGELAL 819 VCRICMVAL LKLECRCKGELAL Sbjct: 224 AAAGEEEDDAGSVEAEEEALVCRICMVALSEDGASGGGGG------TLKLECRCKGELAL 277 Query: 820 AHRRCALRWFGIKGNANCDVCGHDVLNLPVTLRRLXXXXXXXXXTAXXXXXXXXXXXXXX 999 AH CA++WF IKGNA CDVC H+VLNLPVTLRR+ A Sbjct: 278 AHGDCAVKWFSIKGNATCDVCNHEVLNLPVTLRRVHDRQQLVYEAAAAAAAAAAAAAGDD 337 Query: 1000 XXXXXXX-------VWRHGTVILVVVSMLAYFCFLEQLLVGDHGSNXXXXXXXXXXXXXX 1158 VWR GT ILV+VSMLAYFCFLEQLLVGDHG+ Sbjct: 338 IAGGNRRGGYSYGRVWR-GTTILVIVSMLAYFCFLEQLLVGDHGT---AALAISLPFACV 393 Query: 1159 LGTFSALTTAGMVSSKRYVWAYSALQFLLVVLFTHLFYRYVKLQAVIAIILSTFAGFGVA 1338 LG FS+LTTA MVS K YVW YSA+Q+L +VLFTHLFYRYV+LQAVIAIILSTFAGFGVA Sbjct: 394 LGLFSSLTTAKMVSRK-YVWIYSAVQYLFIVLFTHLFYRYVRLQAVIAIILSTFAGFGVA 452 Query: 1339 ICTNAVLLQAIRWKA 1383 IC NA+LLQ IRW+A Sbjct: 453 ICANAILLQIIRWRA 467
>AK105914:Os04g0105100 | Length = 459 Score = 195 bits (495), Expect = 9e-50 Identities = 112/241 (46%), Positives = 138/241 (57%) Frame = +1 Query: 700 VCRICMVALCXXXXXXXXXXXXXXXVVLKLECRCKGELALAHRRCALRWFGIKGNANCDV 879 VCRICMV L LKLEC CKGELALAH+ CA++WF +KG C+V Sbjct: 214 VCRICMVELSEGSD------------TLKLECSCKGELALAHKHCAMKWFTMKGTRTCEV 261 Query: 880 CGHDVLNLPVTLRRLXXXXXXXXXTAXXXXXXXXXXXXXXXXXXXXXVWRHGTVILVVVS 1059 C DV NLPVTL R+ T +W+ G ILV+VS Sbjct: 262 CKEDVQNLPVTLVRVQSMQQPELQT----------NPANASRYDRLRMWQ-GAPILVIVS 310 Query: 1060 MLAYFCFLEQLLVGDHGSNXXXXXXXXXXXXXXLGTFSALTTAGMVSSKRYVWAYSALQF 1239 +LAYFCFLEQLLV G LG FS+LTT MV+ +RYVW Y+ +QF Sbjct: 311 ILAYFCFLEQLLVARDG---IAALAISLPFSCILGLFSSLTTTSMVA-RRYVWIYATIQF 366 Query: 1240 LLVVLFTHLFYRYVKLQAVIAIILSTFAGFGVAICTNAVLLQAIRWKAAADTARRPSPDH 1419 L VV FTHLFYRY+ LQAVI+IIL+TFAGFGV + N+++++ IRW+AA A P+ Sbjct: 367 LFVVFFTHLFYRYLHLQAVISIILATFAGFGVGMTGNSIIVEIIRWRAARAAAAPPAQTR 426 Query: 1420 H 1422 H Sbjct: 427 H 427
>AK071063:Os04g0105100 | Length = 459 Score = 195 bits (495), Expect = 9e-50 Identities = 112/241 (46%), Positives = 138/241 (57%) Frame = +1 Query: 700 VCRICMVALCXXXXXXXXXXXXXXXVVLKLECRCKGELALAHRRCALRWFGIKGNANCDV 879 VCRICMV L LKLEC CKGELALAH+ CA++WF +KG C+V Sbjct: 214 VCRICMVELSEGSD------------TLKLECSCKGELALAHKHCAMKWFTMKGTRTCEV 261 Query: 880 CGHDVLNLPVTLRRLXXXXXXXXXTAXXXXXXXXXXXXXXXXXXXXXVWRHGTVILVVVS 1059 C DV NLPVTL R+ T +W+ G ILV+VS Sbjct: 262 CKEDVQNLPVTLVRVQSMQQPELQT----------NPANASRYDRLRMWQ-GAPILVIVS 310 Query: 1060 MLAYFCFLEQLLVGDHGSNXXXXXXXXXXXXXXLGTFSALTTAGMVSSKRYVWAYSALQF 1239 +LAYFCFLEQLLV G LG FS+LTT MV+ +RYVW Y+ +QF Sbjct: 311 ILAYFCFLEQLLVARDG---IAALAISLPFSCILGLFSSLTTTSMVA-RRYVWIYATIQF 366 Query: 1240 LLVVLFTHLFYRYVKLQAVIAIILSTFAGFGVAICTNAVLLQAIRWKAAADTARRPSPDH 1419 L VV FTHLFYRY+ LQAVI+IIL+TFAGFGV + N+++++ IRW+AA A P+ Sbjct: 367 LFVVFFTHLFYRYLHLQAVISIILATFAGFGVGMTGNSIIVEIIRWRAARAAAAPPAQTR 426 Query: 1420 H 1422 H Sbjct: 427 H 427
>AK100432:Os06g0677300 | Length = 530 Score = 165 bits (418), Expect = 8e-41 Identities = 95/228 (41%), Positives = 129/228 (56%) Frame = +1 Query: 700 VCRICMVALCXXXXXXXXXXXXXXXVVLKLECRCKGELALAHRRCALRWFGIKGNANCDV 879 VCRIC+V L LK+EC CKGELALAH+ CA++WF IKGN CDV Sbjct: 287 VCRICLVEL------------NEGGETLKMECSCKGELALAHQDCAVKWFSIKGNKICDV 334 Query: 880 CGHDVLNLPVTLRRLXXXXXXXXXTAXXXXXXXXXXXXXXXXXXXXXVWRHGTVILVVVS 1059 C +V NLPVTL R+ T W+ ILV+VS Sbjct: 335 CKQEVQNLPVTLLRIPTQTANRRVT----------NGAHQRASQQYRFWQ-DIPILVMVS 383 Query: 1060 MLAYFCFLEQLLVGDHGSNXXXXXXXXXXXXXXLGTFSALTTAGMVSSKRYVWAYSALQF 1239 MLAYFCFLEQLLV D S+ LG S++ + MV +K Y+WAY++ QF Sbjct: 384 MLAYFCFLEQLLVTDLLSH---ALAISLPFSCVLGLLSSMIASTMV-TKSYLWAYASFQF 439 Query: 1240 LLVVLFTHLFYRYVKLQAVIAIILSTFAGFGVAICTNAVLLQAIRWKA 1383 +V+LF H+FY +K+ V+A++LS+F GFG+AI N++L++ +RW++ Sbjct: 440 AIVILFAHIFYNVLKVNPVLAVLLSSFTGFGIAISANSMLVEYLRWRS 487
>AK101610:Os02g0165000 | Length = 487 Score = 165 bits (417), Expect = 1e-40 Identities = 93/227 (40%), Positives = 124/227 (54%) Frame = +1 Query: 700 VCRICMVALCXXXXXXXXXXXXXXXVVLKLECRCKGELALAHRRCALRWFGIKGNANCDV 879 VCRIC+V L LKLEC CKGELALAH+ CA++WF IKGN CDV Sbjct: 242 VCRICLVEL------------NEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDV 289 Query: 880 CGHDVLNLPVTLRRLXXXXXXXXXTAXXXXXXXXXXXXXXXXXXXXXVWRHGTVILVVVS 1059 C +V NLPVTL R+ W+ T +LV+VS Sbjct: 290 CRQEVQNLPVTLLRIQIRTVNRQPR----------NGVQQRAAHPHRFWKE-TPVLVMVS 338 Query: 1060 MLAYFCFLEQLLVGDHGSNXXXXXXXXXXXXXXLGTFSALTTAGMVSSKRYVWAYSALQF 1239 LAYFCFLEQLLV D S LG FS++ + M + Y+WA++ QF Sbjct: 339 TLAYFCFLEQLLVADMKSRALAISLPFSCL---LGIFSSILASTMATDN-YLWAFATFQF 394 Query: 1240 LLVVLFTHLFYRYVKLQAVIAIILSTFAGFGVAICTNAVLLQAIRWK 1380 ++LF H+FY +K+ AV+AI+L++F GFG+AI NA+L++ +RW+ Sbjct: 395 AFLILFAHIFYNLLKMGAVLAILLASFTGFGIAISLNAMLIEYLRWR 441
>AK069562:Os02g0165000 | Length = 487 Score = 165 bits (417), Expect = 1e-40 Identities = 93/227 (40%), Positives = 124/227 (54%) Frame = +1 Query: 700 VCRICMVALCXXXXXXXXXXXXXXXVVLKLECRCKGELALAHRRCALRWFGIKGNANCDV 879 VCRIC+V L LKLEC CKGELALAH+ CA++WF IKGN CDV Sbjct: 242 VCRICLVEL------------NEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDV 289 Query: 880 CGHDVLNLPVTLRRLXXXXXXXXXTAXXXXXXXXXXXXXXXXXXXXXVWRHGTVILVVVS 1059 C +V NLPVTL R+ W+ T +LV+VS Sbjct: 290 CRQEVQNLPVTLLRIQIRTVNRQPR----------NGVQQRAAHPHRFWKE-TPVLVMVS 338 Query: 1060 MLAYFCFLEQLLVGDHGSNXXXXXXXXXXXXXXLGTFSALTTAGMVSSKRYVWAYSALQF 1239 LAYFCFLEQLLV D S LG FS++ + M + Y+WA++ QF Sbjct: 339 TLAYFCFLEQLLVADMKSRALAISLPFSCL---LGIFSSILASTMATDN-YLWAFATFQF 394 Query: 1240 LLVVLFTHLFYRYVKLQAVIAIILSTFAGFGVAICTNAVLLQAIRWK 1380 ++LF H+FY +K+ AV+AI+L++F GFG+AI NA+L++ +RW+ Sbjct: 395 AFLILFAHIFYNLLKMGAVLAILLASFTGFGIAISLNAMLIEYLRWR 441
>AK104023:Os05g0207400 | Length = 168 Score = 58.2 bits (139), Expect = 2e-08 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = +1 Query: 778 VLKLECRCKGELALAHRRCALRWFGIKGNANCDVCGHDVLNL 903 +++L C C+GELA AHRRCA WF ++GN C++CG N+ Sbjct: 66 LVRLGCGCRGELAAAHRRCAEAWFSVRGNRRCEICGETAENI 107
>AK070191:Os05g0207400 | Length = 168 Score = 58.2 bits (139), Expect = 2e-08 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = +1 Query: 778 VLKLECRCKGELALAHRRCALRWFGIKGNANCDVCGHDVLNL 903 +++L C C+GELA AHRRCA WF ++GN C++CG N+ Sbjct: 66 LVRLGCGCRGELAAAHRRCAEAWFSVRGNRRCEICGETAENI 107
>AK121474:Os01g0731800 | Length = 149 Score = 55.5 bits (132), Expect = 1e-07 Identities = 21/42 (50%), Positives = 28/42 (66%) Frame = +1 Query: 778 VLKLECRCKGELALAHRRCALRWFGIKGNANCDVCGHDVLNL 903 V+++ C CK EL AHR CA WF IKG+ C++CG D N+ Sbjct: 56 VIRIGCGCKDELGAAHRHCAEAWFRIKGDRRCEICGSDAKNI 97
>AK073368:Os04g0692300 | Length = 331 Score = 52.8 bits (125), Expect = 7e-07 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +1 Query: 778 VLKLECRCKGELALAHRRCALRWFGIKGNANCDVCGHDVLNL 903 ++ L C CK +LALAH CAL+WF G+ C++CGH +N+ Sbjct: 102 LMDLGCSCKNDLALAHYACALKWFITHGSTVCEICGHVAVNV 143
>AK102413:Os05g0452800 | Length = 244 Score = 48.5 bits (114), Expect = 1e-05 Identities = 17/41 (41%), Positives = 27/41 (65%) Frame = +1 Query: 781 LKLECRCKGELALAHRRCALRWFGIKGNANCDVCGHDVLNL 903 + L C CKG+L+ +H++CA WF I+GN C++C N+ Sbjct: 143 ITLGCSCKGDLSYSHKQCAETWFKIRGNKICEICSSTACNV 183
>AK073332:Os01g0894600 | Length = 219 Score = 42.4 bits (98), Expect = 0.001 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = +1 Query: 793 CRCKGELALAHRRCALRWFGIKGNANCDVC 882 C C G L AHR+C RW KGN C++C Sbjct: 58 CACTGTLKFAHRKCIQRWCDKKGNITCEIC 87
>AK107568:Os05g0552400 | Length = 252 Score = 41.2 bits (95), Expect = 0.002 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 Query: 781 LKLECRCKGELALAHRRCALRWFGIKGNANCDVC 882 ++ C C+G L AHR+C RW KG+ C++C Sbjct: 67 METPCSCRGSLKYAHRKCIQRWCDEKGDTICEIC 100
>AK071098:Os11g0600700 | Length = 278 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +1 Query: 781 LKLECRCKGELALAHRRCALRWFGIKGNANCDVC 882 L+ C C G L AHR C RW KG+ C++C Sbjct: 71 LEKPCACSGSLKYAHRACVQRWCNEKGDITCEIC 104
>AK061258:Os11g0600700 | Length = 278 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +1 Query: 781 LKLECRCKGELALAHRRCALRWFGIKGNANCDVC 882 L+ C C G L AHR C RW KG+ C++C Sbjct: 71 LEKPCACSGSLKYAHRACVQRWCNEKGDITCEIC 104
>AK071857:Os08g0436200 | Length = 276 Score = 40.4 bits (93), Expect = 0.004 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +1 Query: 781 LKLECRCKGELALAHRRCALRWFGIKGNANCDVC 882 L+ C C G L AHR C RW KG+ C++C Sbjct: 73 LESPCACTGSLKYAHRACVQRWCDEKGDLTCEIC 106
>AK071239:Os02g0577100 | Length = 250 Score = 40.4 bits (93), Expect = 0.004 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +1 Query: 781 LKLECRCKGELALAHRRCALRWFGIKGNANCDVC 882 L+ C C G L AHR C RW KG+ C++C Sbjct: 44 LESPCACSGSLKYAHRECVQRWCNEKGDIICEIC 77
>AK108601:Os01g0121200 | Length = 269 Score = 39.7 bits (91), Expect = 0.006 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 781 LKLECRCKGELALAHRRCALRWFGIKGNANCDVC 882 ++ C C G L AHR+C RW KG+ C++C Sbjct: 67 MEAPCACCGSLKYAHRKCIQRWCNEKGDTVCEIC 100
>Os05g0355300:Os05g0355300 | Length = 249 Score = 38.5 bits (88), Expect = 0.014 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 793 CRCKGELALAHRRCALRWFGIKGNANCDVC 882 C C G L AHR C RW KG+ C++C Sbjct: 54 CGCSGSLKYAHRGCVQRWCDEKGSTLCEIC 83
>AK099496:Os01g0303600 | Length = 245 Score = 38.5 bits (88), Expect = 0.014 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 793 CRCKGELALAHRRCALRWFGIKGNANCDVC 882 C C G L AHR C RW KG+ C++C Sbjct: 58 CGCSGSLKYAHRGCVQRWCDEKGSTLCEIC 87
>AK099522:Os01g0894600 | Length = 194 Score = 34.7 bits (78), Expect = 0.20 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 805 GELALAHRRCALRWFGIKGNANCDVC 882 G + AHR+C RW KGN C++C Sbjct: 37 GWMQFAHRKCIQRWCDKKGNITCEIC 62
>AK102470:Os06g0639100 | Length = 129 Score = 31.6 bits (70), Expect = 1.7 Identities = 10/33 (30%), Positives = 16/33 (48%) Frame = +1 Query: 781 LKLECRCKGELALAHRRCALRWFGIKGNANCDV 879 L+ C C G + H+ C L+W + C+V Sbjct: 52 LRYPCACSGSIKFVHQDCLLQWLDHSNSRQCEV 84
>AK066236:Os04g0337000 | Length = 321 Score = 29.3 bits (64), Expect = 8.5 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 6/33 (18%) Frame = +2 Query: 470 RSRCR*PASPGGSLHPTAT------TGSGWPTR 550 R R PASPGG HPTAT G G PT+ Sbjct: 12 RLRLPPPASPGGGGHPTATRLYYTEIGIGTPTK 44 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 27,559,024 Number of extensions: 473125 Number of successful extensions: 2159 Number of sequences better than 10.0: 23 Number of HSP's gapped: 2143 Number of HSP's successfully gapped: 27 Length of query: 548 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 442 Effective length of database: 11,155,509 Effective search space: 4930734978 Effective search space used: 4930734978 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
