ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74f13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK066896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-114
2ref|NM_001056219.1| Oryza sativa (japonica cultivar-group) Os03g... 414 e-112
3dbj|AK102826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 414 e-112
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-34
5gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome... 157 3e-34
6gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome... 157 3e-34
7dbj|AK060809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 9e-22
8gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence 90 5e-14
9gb|AY109810.1| Zea mays CL5193_1 mRNA sequence 72 1e-08
10ref|NM_001056218.1| Oryza sativa (japonica cultivar-group) Os03g... 66 8e-07
11ref|NM_128477.2| Arabidopsis thaliana unknown protein (AT2G29210... 52 0.011
12gb|BT000633.1| Arabidopsis thaliana putative proline-rich protei... 52 0.011
13gb|AY125501.1| Arabidopsis thaliana At2g29210/F16P2.41 mRNA, com... 52 0.011
14gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map... 52 0.011
15emb|AJ292982.1|ATH292982 Arabidopsis thaliana mRNA for SRM102 52 0.011
16ref|NM_198817.1| Danio rerio starmaker (stm), mRNA >gi|37575430|... 48 0.18
17ref|XM_001215915.1| Aspergillus terreus NIH2624 NADH-ubiquinone ... 46 0.70
18ref|XM_631574.1| Dictyostelium discoideum AX4 hypothetical prote... 46 0.70
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.70
20gb|AC026434.5| Homo sapiens chromosome 5 clone CTD-2244C20, comp... 46 0.70
21gb|AC034233.5| Homo sapiens chromosome 5 clone CTD-2251M10, comp... 46 0.70
22gb|AC016599.6| Homo sapiens chromosome 5 clone CTD-2054D19, comp... 46 0.70
23gb|AC010379.5|AC010379 Homo sapiens chromosome 5 clone CTD-2064M... 46 0.70
24dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.70
25ref|XR_023204.1| PREDICTED: Pan troglodytes similar to NOLC1 pro... 44 2.7
26ref|XR_019523.1| PREDICTED: Homo sapiens similar to Nucleolar ph... 44 2.7
27ref|XR_016896.1| PREDICTED: Homo sapiens similar to Nucleolar ph... 44 2.7
28emb|CT009601.13| Mouse DNA sequence from clone RP23-38D2 on chro... 44 2.7
29gb|AC183548.3| Pan troglodytes BAC clone CH251-199C23 from chrom... 44 2.7
30ref|XM_587482.2| PREDICTED: Bos taurus hypothetical LOC539475 (L... 44 2.7
31gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequ... 44 2.7
32gb|AY042083.1| Plasmodium vivax erythrocyte binding proteins (ma... 44 2.7
33gb|AC074281.20| Homo sapiens X BAC RP11-66N5 (Roswell Park Cance... 44 2.7

>dbj|AK066896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091L22, full
           insert sequence
          Length = 2881
 Score =  422 bits (213), Expect = e-114
 Identities = 441/517 (85%)
 Strand = Plus / Plus

                                                                       
Query: 80  aagatgtcaggaggcttcttccgggggacgtcggccgaccaggataccagattctccaac 139
           |||||||| || |||||||||||||||||||||||||| ||||| ||| | |||||||||
Sbjct: 104 aagatgtcgggcggcttcttccgggggacgtcggccgatcaggacacccgtttctccaac 163

                                                                       
Query: 140 aagcatgccaagttgctgaagacacagaagttcgcgtctgagcttgaccatcaggtggac 199
           ||||| || ||| |||| ||||| |||||||||||| | |||||||| || | |||||||
Sbjct: 164 aagcaggcgaagctgctcaagacgcagaagttcgcgcccgagcttgaacacctggtggac 223

                                                                       
Query: 200 atgtcaaaggtgaagatggacgtgatgaagccgtggattgccacacgggtcactgagctt 259
           ||| | |||||||||||||| |||||||| || ||||| || || || ||||| ||||| 
Sbjct: 224 atgactaaggtgaagatggatgtgatgaaaccatggatcgcgacccgtgtcaccgagctc 283

                                                                       
Query: 260 cttgggttcgaggacgaagtgcttatcaacttcatctacggcctgctcgatgcgaaggag 319
           || |||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||
Sbjct: 284 ctagggttcgaggacgaagtgctcatcaacttcatctacggcctcctcgaagagaaggag 343

                                                                       
Query: 320 gtggacgggaagtacatacagatccagctgacggggttcatggagaagaatacaataaag 379
           | ||| || ||| | |||||||| |||||||| || |||||||||||||| ||| | |||
Sbjct: 344 gcggatggaaagaagatacagatacagctgacaggattcatggagaagaacacagtgaag 403

                                                                       
Query: 380 ttcatgagggagctgtggagcctccttctaagtgcgcagcagaatgccagtggtgtgccc 439
           ||||||| |||||||||||||||||| || ||||| || |||||||| ||||| ||||||
Sbjct: 404 ttcatgaaggagctgtggagcctcctactcagtgcacaacagaatgctagtggggtgccc 463

                                                                       
Query: 440 cagcaatttttggatgcaaaggaggctgagattcagcagagaaaggcggaagaggctaga 499
           || || ||||| ||||||||||  |||||||||||||||| |||||| || ||   ||||
Sbjct: 464 caacagtttttagatgcaaagggagctgagattcagcagaaaaaggcagaggaaagtaga 523

                                                                       
Query: 500 attgcccaggagatccagaagaagcgagagaaagatggtagggacgcagaactagataaa 559
           ||||| ||||||||||||||||| || ||||||||||| |||||   ||||||||| |||
Sbjct: 524 attgctcaggagatccagaagaaacgggagaaagatggaagggagcaagaactagagaaa 583

                                                
Query: 560 cgcaaaatgatggccggggatactggtaattcaagat 596
           |  ||| |||||| ||||||| | |||||||| ||||
Sbjct: 584 caaaaattgatggacggggatgccggtaattctagat 620



 Score =  115 bits (58), Expect = 9e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2726 gaagtgtgctcatatgatacctgtttaatgttctgtatgtttatgtggcagttgatctga 2785
            |||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 2697 gaagtgtgcttatatgactcctatttaatgttctgtatgtttacgtggcagttgacctga 2756

                                          
Query: 2786 gtaattgacgattcctgagctgtttccttg 2815
            |||||||| |||||||||||||||| ||||
Sbjct: 2757 gtaattgaggattcctgagctgtttgcttg 2786



 Score =  113 bits (57), Expect = 4e-21
 Identities = 125/147 (85%), Gaps = 3/147 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2071 cagttcaggctcagaagaatctgagaaacacagatcccagtctgagaagcgaagacataa 2130
            ||||||||| ||||||||||| | |||||| |||||||| |||||||||||||  |||||
Sbjct: 2200 cagttcaggttcagaagaatcagggaaacatagatcccattctgagaagcgaaagcataa 2259

                                                                        
Query: 2131 aaagggtcacaagcataagaagcattatgatgatagttctgat---tctgattctgactc 2187
            |||| | |  ||||||||||  | ||||||||| |||||||||   ||| |||| || ||
Sbjct: 2260 aaagagccgtaagcataagagacgttatgatgacagttctgatgaatctaattcggagtc 2319

                                       
Query: 2188 agatgacaaggagtccaagaggaggag 2214
            ||||||||| |||||||||||||||||
Sbjct: 2320 agatgacaaagagtccaagaggaggag 2346



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2333 tcagatcttgagaaggatcgtcaatctggctcagacgctgatgttgggaagaaaggttca 2392
            ||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||
Sbjct: 2471 tcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggttca 2530

              
Query: 2393 ta 2394
            ||
Sbjct: 2531 ta 2532



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 90/107 (84%)
 Strand = Plus / Plus

                                                                       
Query: 806 tcagcttcacctagacgttctgtttccccccgaaggcattccccaagaatcgctccttca 865
           |||| ||||||||| |||||| |||| || |||| || ||| |||||||   | ||||| 
Sbjct: 827 tcagtttcacctaggcgttctttttctccacgaaagcgttctccaagaagtaccccttcg 886

                                                          
Query: 866 atgtctaggcggaggtcaccgtattccaggagatcaccttcggtacc 912
           ||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 887 atgtcgaggcggagatcaccgtattccagaagatcaccttcagtacc 933



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2496 cttcagatgttgagaaggaccatgaatctgactcggatgctgatgttaggaagagagttt 2555
            |||||||| |||||||||| | |||||||||||| |||||||||| |||||||| || ||
Sbjct: 2469 cttcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggtt 2528

                
Query: 2556 cata 2559
            ||||
Sbjct: 2529 cata 2532



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 118/147 (80%)
 Strand = Plus / Plus

                                                                       
Query: 641 gatgctgagaaagaaaaggaactggacttgaagcatagctcgagaacaaagagccgggaa 700
           ||||||||| | ||||| |||||||| |  ||||||||||| ||| ||||||||||||||
Sbjct: 638 gatgctgaggaggaaaaagaactggattctaagcatagctcaagagcaaagagccgggaa 697

                                                                       
Query: 701 catcgaagacctaggagcacatctctgtcgccccgtggtaggcaacggtctatttctcca 760
              |  ||  | |||||||  ||  ||||||| || |||||||  || ||| ||||||| 
Sbjct: 698 agccttaggtccaggagcatctccttgtcgcctcgcggtaggcggcgatctgtttctcct 757

                                      
Query: 761 aggaggcgctctccatccccttccaga 787
           |||||||| |||||||| |||||||||
Sbjct: 758 aggaggcgttctccatctccttccaga 784



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1088 cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccg 1147
            |||||||| || ||||||||||| |||||||| ||||| ||||| | |||||| ||||| 
Sbjct: 1199 cggtccccttcaccaggaagacgtaggccacggtccccttcaccaggaagacgtaggcca 1258

                       
Query: 1148 cggtccccatc 1158
            ||||| |||||
Sbjct: 1259 cggtctccatc 1269



 Score = 60.0 bits (30), Expect = 5e-05
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1607 cgtgcaagggagaatgcacggaaggccaattcatcacgcaggatatccaaggatttctca 1666
            |||||||| ||||||||||| || || |||||||||||||| | |   ||||||||||||
Sbjct: 1754 cgtgcaagagagaatgcacgaaaagcaaattcatcacgcagaaaaattaaggatttctca 1813

                              
Query: 1667 gctgatctgcaaccaaag 1684
            || |||||| ||| ||||
Sbjct: 1814 gcagatctggaactaaag 1831



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1089 ggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccgc 1148
            |||| ||||||||||||||||| ||||| || ||||| ||||| | | |||| ||||| |
Sbjct: 1110 ggtctccatctccaggaagacgtaggcctcggtccccttcacccggacgacgtaggccac 1169

                         
Query: 1149 ggtccccatcacc 1161
            ||||||| |||||
Sbjct: 1170 ggtccccttcacc 1182



 Score = 46.1 bits (23), Expect = 0.70
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1088 cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggcc 1146
            |||||||| || ||||||||||| |||||||| || ||||| || |  |||||||||||
Sbjct: 1229 cggtccccttcaccaggaagacgtaggccacggtctccatctccgggtagacgcaggcc 1287



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>ref|NM_001056219.1| Oryza sativa (japonica cultivar-group) Os03g0270200 (Os03g0270200)
           mRNA, complete cds
          Length = 3183

 Score =  414 bits (209), Expect = e-112
 Identities = 413/481 (85%)
 Strand = Plus / Plus

                                                                       
Query: 80  aagatgtcaggaggcttcttccgggggacgtcggccgaccaggataccagattctccaac 139
           |||||||| || |||||||||||||||||||||||||| ||||| ||| | |||||||||
Sbjct: 67  aagatgtcgggcggcttcttccgggggacgtcggccgatcaggacacccgtttctccaac 126

                                                                       
Query: 140 aagcatgccaagttgctgaagacacagaagttcgcgtctgagcttgaccatcaggtggac 199
           ||||| || ||| |||| ||||| |||||||||||| | |||||||| || | |||||||
Sbjct: 127 aagcaggcgaagctgctcaagacgcagaagttcgcgcccgagcttgaacacctggtggac 186

                                                                       
Query: 200 atgtcaaaggtgaagatggacgtgatgaagccgtggattgccacacgggtcactgagctt 259
           ||| | |||||||||||||| |||||||| || ||||| || || || ||||| ||||| 
Sbjct: 187 atgactaaggtgaagatggatgtgatgaaaccatggatcgcgacccgtgtcaccgagctc 246

                                                                       
Query: 260 cttgggttcgaggacgaagtgcttatcaacttcatctacggcctgctcgatgcgaaggag 319
           || |||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||
Sbjct: 247 ctagggttcgaggacgaagtgctcatcaacttcatctacggcctcctcgaagagaaggag 306

                                                                       
Query: 320 gtggacgggaagtacatacagatccagctgacggggttcatggagaagaatacaataaag 379
           | ||| || ||| | |||||||| |||||||| || |||||||||||||| ||| | |||
Sbjct: 307 gcggatggaaagaagatacagatacagctgacaggattcatggagaagaacacagtgaag 366

                                                                       
Query: 380 ttcatgagggagctgtggagcctccttctaagtgcgcagcagaatgccagtggtgtgccc 439
           ||||||| |||||||||||||||||| || ||||| || |||||||| ||||| ||||||
Sbjct: 367 ttcatgaaggagctgtggagcctcctactcagtgcacaacagaatgctagtggggtgccc 426

                                                                       
Query: 440 cagcaatttttggatgcaaaggaggctgagattcagcagagaaaggcggaagaggctaga 499
           || || ||||| ||||||||||| |||||||||||||||| |||||| || ||   ||||
Sbjct: 427 caacagtttttagatgcaaaggaagctgagattcagcagaaaaaggcagaggaaagtaga 486

                                                                       
Query: 500 attgcccaggagatccagaagaagcgagagaaagatggtagggacgcagaactagataaa 559
           ||||| ||||||||||||||||| || ||||||||||| |||||   ||||||||| |||
Sbjct: 487 attgctcaggagatccagaagaaacgggagaaagatggaagggagcaagaactagagaaa 546

            
Query: 560 c 560
           |
Sbjct: 547 c 547



 Score =  115 bits (58), Expect = 9e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2726 gaagtgtgctcatatgatacctgtttaatgttctgtatgtttatgtggcagttgatctga 2785
            |||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 2715 gaagtgtgcttatatgactcctatttaatgttctgtatgtttacgtggcagttgacctga 2774

                                          
Query: 2786 gtaattgacgattcctgagctgtttccttg 2815
            |||||||| |||||||||||||||| ||||
Sbjct: 2775 gtaattgaggattcctgagctgtttgcttg 2804



 Score =  113 bits (57), Expect = 4e-21
 Identities = 125/147 (85%), Gaps = 3/147 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2071 cagttcaggctcagaagaatctgagaaacacagatcccagtctgagaagcgaagacataa 2130
            ||||||||| ||||||||||| | |||||| |||||||| |||||||||||||  |||||
Sbjct: 2218 cagttcaggttcagaagaatcagggaaacatagatcccattctgagaagcgaaagcataa 2277

                                                                        
Query: 2131 aaagggtcacaagcataagaagcattatgatgatagttctgat---tctgattctgactc 2187
            |||| | |  ||||||||||  | ||||||||| |||||||||   ||| |||| || ||
Sbjct: 2278 aaagagccgtaagcataagagacgttatgatgacagttctgatgaatctaattcggagtc 2337

                                       
Query: 2188 agatgacaaggagtccaagaggaggag 2214
            ||||||||| |||||||||||||||||
Sbjct: 2338 agatgacaaagagtccaagaggaggag 2364



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2333 tcagatcttgagaaggatcgtcaatctggctcagacgctgatgttgggaagaaaggttca 2392
            ||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||
Sbjct: 2489 tcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggttca 2548

              
Query: 2393 ta 2394
            ||
Sbjct: 2549 ta 2550



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 90/107 (84%)
 Strand = Plus / Plus

                                                                       
Query: 806 tcagcttcacctagacgttctgtttccccccgaaggcattccccaagaatcgctccttca 865
           |||| ||||||||| |||||| |||| || |||| || ||| |||||||   | ||||| 
Sbjct: 845 tcagtttcacctaggcgttctttttctccacgaaagcgttctccaagaagtaccccttcg 904

                                                          
Query: 866 atgtctaggcggaggtcaccgtattccaggagatcaccttcggtacc 912
           ||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 905 atgtcgaggcggagatcaccgtattccagaagatcaccttcagtacc 951



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2496 cttcagatgttgagaaggaccatgaatctgactcggatgctgatgttaggaagagagttt 2555
            |||||||| |||||||||| | |||||||||||| |||||||||| |||||||| || ||
Sbjct: 2487 cttcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggtt 2546

                
Query: 2556 cata 2559
            ||||
Sbjct: 2547 cata 2550



 Score = 69.9 bits (35), Expect = 5e-08
 Identities = 119/147 (80%)
 Strand = Plus / Plus

                                                                       
Query: 641 gatgctgagaaagaaaaggaactggacttgaagcatagctcgagaacaaagagccgggaa 700
           ||||||||| | ||||| |||||||| |  ||||||||||| ||||||||||||||||||
Sbjct: 656 gatgctgaggaggaaaaagaactggattctaagcatagctcaagaacaaagagccgggaa 715

                                                                       
Query: 701 catcgaagacctaggagcacatctctgtcgccccgtggtaggcaacggtctatttctcca 760
              |  ||  | |||||||  ||  ||||||| || |||||||  || ||| ||||||| 
Sbjct: 716 agccttaggtccaggagcatctccttgtcgcctcgcggtaggcggcgatctgtttctcct 775

                                      
Query: 761 aggaggcgctctccatccccttccaga 787
           |||||||| |||||||| |||||||||
Sbjct: 776 aggaggcgttctccatctccttccaga 802



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1088 cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccg 1147
            |||||||| || ||||||||||| |||||||| ||||| ||||| | |||||| ||||| 
Sbjct: 1217 cggtccccttcaccaggaagacgtaggccacggtccccttcaccaggaagacgtaggcca 1276

                       
Query: 1148 cggtccccatc 1158
            ||||| |||||
Sbjct: 1277 cggtctccatc 1287



 Score = 60.0 bits (30), Expect = 5e-05
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1607 cgtgcaagggagaatgcacggaaggccaattcatcacgcaggatatccaaggatttctca 1666
            |||||||| ||||||||||| || || |||||||||||||| | |   ||||||||||||
Sbjct: 1772 cgtgcaagagagaatgcacgaaaagcaaattcatcacgcagaaaaattaaggatttctca 1831

                              
Query: 1667 gctgatctgcaaccaaag 1684
            || |||||| ||| ||||
Sbjct: 1832 gcagatctggaactaaag 1849



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1089 ggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccgc 1148
            |||| ||||||||||||||||| ||||| || ||||| ||||| | | |||| ||||| |
Sbjct: 1128 ggtctccatctccaggaagacgtaggcctcggtccccttcacccggacgacgtaggccac 1187

                         
Query: 1149 ggtccccatcacc 1161
            ||||||| |||||
Sbjct: 1188 ggtccccttcacc 1200



 Score = 46.1 bits (23), Expect = 0.70
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1088 cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggcc 1146
            |||||||| || ||||||||||| |||||||| || ||||| || |  |||||||||||
Sbjct: 1247 cggtccccttcaccaggaagacgtaggccacggtctccatctccgggtagacgcaggcc 1305



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>dbj|AK102826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C10, full
           insert sequence
          Length = 3185

 Score =  414 bits (209), Expect = e-112
 Identities = 413/481 (85%)
 Strand = Plus / Plus

                                                                       
Query: 80  aagatgtcaggaggcttcttccgggggacgtcggccgaccaggataccagattctccaac 139
           |||||||| || |||||||||||||||||||||||||| ||||| ||| | |||||||||
Sbjct: 69  aagatgtcgggcggcttcttccgggggacgtcggccgatcaggacacccgtttctccaac 128

                                                                       
Query: 140 aagcatgccaagttgctgaagacacagaagttcgcgtctgagcttgaccatcaggtggac 199
           ||||| || ||| |||| ||||| |||||||||||| | |||||||| || | |||||||
Sbjct: 129 aagcaggcgaagctgctcaagacgcagaagttcgcgcccgagcttgaacacctggtggac 188

                                                                       
Query: 200 atgtcaaaggtgaagatggacgtgatgaagccgtggattgccacacgggtcactgagctt 259
           ||| | |||||||||||||| |||||||| || ||||| || || || ||||| ||||| 
Sbjct: 189 atgactaaggtgaagatggatgtgatgaaaccatggatcgcgacccgtgtcaccgagctc 248

                                                                       
Query: 260 cttgggttcgaggacgaagtgcttatcaacttcatctacggcctgctcgatgcgaaggag 319
           || |||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||
Sbjct: 249 ctagggttcgaggacgaagtgctcatcaacttcatctacggcctcctcgaagagaaggag 308

                                                                       
Query: 320 gtggacgggaagtacatacagatccagctgacggggttcatggagaagaatacaataaag 379
           | ||| || ||| | |||||||| |||||||| || |||||||||||||| ||| | |||
Sbjct: 309 gcggatggaaagaagatacagatacagctgacaggattcatggagaagaacacagtgaag 368

                                                                       
Query: 380 ttcatgagggagctgtggagcctccttctaagtgcgcagcagaatgccagtggtgtgccc 439
           ||||||| |||||||||||||||||| || ||||| || |||||||| ||||| ||||||
Sbjct: 369 ttcatgaaggagctgtggagcctcctactcagtgcacaacagaatgctagtggggtgccc 428

                                                                       
Query: 440 cagcaatttttggatgcaaaggaggctgagattcagcagagaaaggcggaagaggctaga 499
           || || ||||| ||||||||||| |||||||||||||||| |||||| || ||   ||||
Sbjct: 429 caacagtttttagatgcaaaggaagctgagattcagcagaaaaaggcagaggaaagtaga 488

                                                                       
Query: 500 attgcccaggagatccagaagaagcgagagaaagatggtagggacgcagaactagataaa 559
           ||||| ||||||||||||||||| || ||||||||||| |||||   ||||||||| |||
Sbjct: 489 attgctcaggagatccagaagaaacgggagaaagatggaagggagcaagaactagagaaa 548

            
Query: 560 c 560
           |
Sbjct: 549 c 549



 Score =  115 bits (58), Expect = 9e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2726 gaagtgtgctcatatgatacctgtttaatgttctgtatgtttatgtggcagttgatctga 2785
            |||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 2717 gaagtgtgcttatatgactcctatttaatgttctgtatgtttacgtggcagttgacctga 2776

                                          
Query: 2786 gtaattgacgattcctgagctgtttccttg 2815
            |||||||| |||||||||||||||| ||||
Sbjct: 2777 gtaattgaggattcctgagctgtttgcttg 2806



 Score =  113 bits (57), Expect = 4e-21
 Identities = 125/147 (85%), Gaps = 3/147 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2071 cagttcaggctcagaagaatctgagaaacacagatcccagtctgagaagcgaagacataa 2130
            ||||||||| ||||||||||| | |||||| |||||||| |||||||||||||  |||||
Sbjct: 2220 cagttcaggttcagaagaatcagggaaacatagatcccattctgagaagcgaaagcataa 2279

                                                                        
Query: 2131 aaagggtcacaagcataagaagcattatgatgatagttctgat---tctgattctgactc 2187
            |||| | |  ||||||||||  | ||||||||| |||||||||   ||| |||| || ||
Sbjct: 2280 aaagagccgtaagcataagagacgttatgatgacagttctgatgaatctaattcggagtc 2339

                                       
Query: 2188 agatgacaaggagtccaagaggaggag 2214
            ||||||||| |||||||||||||||||
Sbjct: 2340 agatgacaaagagtccaagaggaggag 2366



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2333 tcagatcttgagaaggatcgtcaatctggctcagacgctgatgttgggaagaaaggttca 2392
            ||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||
Sbjct: 2491 tcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggttca 2550

              
Query: 2393 ta 2394
            ||
Sbjct: 2551 ta 2552



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 90/107 (84%)
 Strand = Plus / Plus

                                                                       
Query: 806 tcagcttcacctagacgttctgtttccccccgaaggcattccccaagaatcgctccttca 865
           |||| ||||||||| |||||| |||| || |||| || ||| |||||||   | ||||| 
Sbjct: 847 tcagtttcacctaggcgttctttttctccacgaaagcgttctccaagaagtaccccttcg 906

                                                          
Query: 866 atgtctaggcggaggtcaccgtattccaggagatcaccttcggtacc 912
           ||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 907 atgtcgaggcggagatcaccgtattccagaagatcaccttcagtacc 953



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2496 cttcagatgttgagaaggaccatgaatctgactcggatgctgatgttaggaagagagttt 2555
            |||||||| |||||||||| | |||||||||||| |||||||||| |||||||| || ||
Sbjct: 2489 cttcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggtt 2548

                
Query: 2556 cata 2559
            ||||
Sbjct: 2549 cata 2552



 Score = 69.9 bits (35), Expect = 5e-08
 Identities = 119/147 (80%)
 Strand = Plus / Plus

                                                                       
Query: 641 gatgctgagaaagaaaaggaactggacttgaagcatagctcgagaacaaagagccgggaa 700
           ||||||||| | ||||| |||||||| |  ||||||||||| ||||||||||||||||||
Sbjct: 658 gatgctgaggaggaaaaagaactggattctaagcatagctcaagaacaaagagccgggaa 717

                                                                       
Query: 701 catcgaagacctaggagcacatctctgtcgccccgtggtaggcaacggtctatttctcca 760
              |  ||  | |||||||  ||  ||||||| || |||||||  || ||| ||||||| 
Sbjct: 718 agccttaggtccaggagcatctccttgtcgcctcgcggtaggcggcgatctgtttctcct 777

                                      
Query: 761 aggaggcgctctccatccccttccaga 787
           |||||||| |||||||| |||||||||
Sbjct: 778 aggaggcgttctccatctccttccaga 804



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1088 cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccg 1147
            |||||||| || ||||||||||| |||||||| ||||| ||||| | |||||| ||||| 
Sbjct: 1219 cggtccccttcaccaggaagacgtaggccacggtccccttcaccaggaagacgtaggcca 1278

                       
Query: 1148 cggtccccatc 1158
            ||||| |||||
Sbjct: 1279 cggtctccatc 1289



 Score = 60.0 bits (30), Expect = 5e-05
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1607 cgtgcaagggagaatgcacggaaggccaattcatcacgcaggatatccaaggatttctca 1666
            |||||||| ||||||||||| || || |||||||||||||| | |   ||||||||||||
Sbjct: 1774 cgtgcaagagagaatgcacgaaaagcaaattcatcacgcagaaaaattaaggatttctca 1833

                              
Query: 1667 gctgatctgcaaccaaag 1684
            || |||||| ||| ||||
Sbjct: 1834 gcagatctggaactaaag 1851



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1089 ggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccgc 1148
            |||| ||||||||||||||||| ||||| || ||||| ||||| | | |||| ||||| |
Sbjct: 1130 ggtctccatctccaggaagacgtaggcctcggtccccttcacccggacgacgtaggccac 1189

                         
Query: 1149 ggtccccatcacc 1161
            ||||||| |||||
Sbjct: 1190 ggtccccttcacc 1202



 Score = 46.1 bits (23), Expect = 0.70
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1088 cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggcc 1146
            |||||||| || ||||||||||| |||||||| || ||||| || |  |||||||||||
Sbjct: 1249 cggtccccttcaccaggaagacgtaggccacggtctccatctccgggtagacgcaggcc 1307



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  157 bits (79), Expect = 3e-34
 Identities = 133/151 (88%)
 Strand = Plus / Minus

                                                                           
Query: 335     atacagatccagctgacggggttcatggagaagaatacaataaagttcatgagggagctg 394
               |||||||| |||||||| || |||||||||||||| ||| | |||||||||| |||||||
Sbjct: 9004262 atacagatacagctgacaggattcatggagaagaacacagtgaagttcatgaaggagctg 9004203

                                                                           
Query: 395     tggagcctccttctaagtgcgcagcagaatgccagtggtgtgccccagcaatttttggat 454
               ||||||||||| || ||||| || |||||||| ||||| |||||||| || ||||| |||
Sbjct: 9004202 tggagcctcctactcagtgcacaacagaatgctagtggggtgccccaacagtttttagat 9004143

                                              
Query: 455     gcaaaggaggctgagattcagcagagaaagg 485
               |||||||| |||||||||||||||| |||||
Sbjct: 9004142 gcaaaggaagctgagattcagcagaaaaagg 9004112



 Score =  125 bits (63), Expect = 9e-25
 Identities = 105/119 (88%)
 Strand = Plus / Minus

                                                                           
Query: 191     caggtggacatgtcaaaggtgaagatggacgtgatgaagccgtggattgccacacgggtc 250
               |||||||||||| | |||||||||||||| |||||||| || ||||| || || || |||
Sbjct: 9004960 caggtggacatgactaaggtgaagatggatgtgatgaaaccatggatcgcgacccgtgtc 9004901

                                                                          
Query: 251     actgagcttcttgggttcgaggacgaagtgcttatcaacttcatctacggcctgctcga 309
               || ||||| || |||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 9004900 accgagctcctagggttcgaggacgaagtgctcatcaacttcatctacggcctcctcga 9004842



 Score =  115 bits (58), Expect = 9e-22
 Identities = 82/90 (91%)
 Strand = Plus / Minus

                                                                           
Query: 2726    gaagtgtgctcatatgatacctgtttaatgttctgtatgtttatgtggcagttgatctga 2785
               |||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 8999834 gaagtgtgcttatatgactcctatttaatgttctgtatgtttacgtggcagttgacctga 8999775

                                             
Query: 2786    gtaattgacgattcctgagctgtttccttg 2815
               |||||||| |||||||||||||||| ||||
Sbjct: 8999774 gtaattgaggattcctgagctgtttgcttg 8999745



 Score =  113 bits (57), Expect = 4e-21
 Identities = 125/147 (85%), Gaps = 3/147 (2%)
 Strand = Plus / Minus

                                                                           
Query: 2071    cagttcaggctcagaagaatctgagaaacacagatcccagtctgagaagcgaagacataa 2130
               ||||||||| ||||||||||| | |||||| |||||||| |||||||||||||  |||||
Sbjct: 9000331 cagttcaggttcagaagaatcagggaaacatagatcccattctgagaagcgaaagcataa 9000272

                                                                           
Query: 2131    aaagggtcacaagcataagaagcattatgatgatagttctgat---tctgattctgactc 2187
               |||| | |  ||||||||||  | ||||||||| |||||||||   ||| |||| || ||
Sbjct: 9000271 aaagagccgtaagcataagagacgttatgatgacagttctgatgaatctaattcggagtc 9000212

                                          
Query: 2188    agatgacaaggagtccaagaggaggag 2214
               ||||||||| |||||||||||||||||
Sbjct: 9000211 agatgacaaagagtccaagaggaggag 9000185



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                           
Query: 2333    tcagatcttgagaaggatcgtcaatctggctcagacgctgatgttgggaagaaaggttca 2392
               ||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||
Sbjct: 9000060 tcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggttca 9000001

                 
Query: 2393    ta 2394
               ||
Sbjct: 9000000 ta 8999999



 Score = 79.8 bits (40), Expect = 5e-11
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                           
Query: 103     ggggacgtcggccgaccaggataccagattctccaacaagcatgccaagttgctgaagac 162
               ||||||||||||||| ||||| ||| | |||||||||||||| || ||| |||| |||||
Sbjct: 9005171 ggggacgtcggccgatcaggacacccgtttctccaacaagcaggcgaagctgctcaagac 9005112

                                       
Query: 163     acagaagttcgcgtctgagcttga 186
                |||||||||||| | ||||||||
Sbjct: 9005111 gcagaagttcgcgcccgagcttga 9005088



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                           
Query: 806     tcagcttcacctagacgttctgtttccccccgaaggcattccccaagaatcgctccttca 865
               |||| ||||||||| |||||| |||| || |||| || ||| |||||||   | ||||| 
Sbjct: 9002518 tcagtttcacctaggcgttctttttctccacgaaagcgttctccaagaagtaccccttcg 9002459

                                                              
Query: 866     atgtctaggcggaggtcaccgtattccaggagatcaccttcggtacc 912
               ||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 9002458 atgtcgaggcggagatcaccgtattccagaagatcaccttcagtacc 9002412



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                           
Query: 2496    cttcagatgttgagaaggaccatgaatctgactcggatgctgatgttaggaagagagttt 2555
               |||||||| |||||||||| | |||||||||||| |||||||||| |||||||| || ||
Sbjct: 9000062 cttcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggtt 9000003

                   
Query: 2556    cata 2559
               ||||
Sbjct: 9000002 cata 8999999



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                           
Query: 496     tagaattgcccaggagatccagaagaagcgagagaaagatggtagggacgcagaactaga 555
               ||||||||| ||||||||||||||||| || ||||||||||| |||||   |||||||||
Sbjct: 9003662 tagaattgctcaggagatccagaagaaacgggagaaagatggaagggagcaagaactaga 9003603

                    
Query: 556     taaac 560
                ||||
Sbjct: 9003602 gaaac 9003598



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                           
Query: 1088    cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccg 1147
               |||||||| || ||||||||||| |||||||| ||||| ||||| | |||||| ||||| 
Sbjct: 9002146 cggtccccttcaccaggaagacgtaggccacggtccccttcaccaggaagacgtaggcca 9002087

                          
Query: 1148    cggtccccatc 1158
               ||||| |||||
Sbjct: 9002086 cggtctccatc 9002076



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                           
Query: 1089    ggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccgc 1148
               |||| ||||||||||||||||| ||||| || ||||| ||||| | | |||| ||||| |
Sbjct: 9002235 ggtctccatctccaggaagacgtaggcctcggtccccttcacccggacgacgtaggccac 9002176

                            
Query: 1149    ggtccccatcacc 1161
               ||||||| |||||
Sbjct: 9002175 ggtccccttcacc 9002163



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                        
Query: 641     gatgctgagaaagaaaaggaactggacttgaagcatagctcgagaacaaagagccgg 697
               ||||||||| | ||||| |||||||| |  ||||||||||| |||||||||||||||
Sbjct: 9003404 gatgctgaggaggaaaaagaactggattctaagcatagctcaagaacaaagagccgg 9003348



 Score = 50.1 bits (25), Expect = 0.045
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                           
Query: 1616    gagaatgcacggaaggccaattcatcacgcaggatatccaaggatttctcagctgatctg 1675
               ||||||||||| || || |||||||||||||| | |   |||||||||||||| ||||||
Sbjct: 9001224 gagaatgcacgaaaagcaaattcatcacgcagaaaaattaaggatttctcagcagatctg 9001165

                        
Query: 1676    caaccaaag 1684
                ||| ||||
Sbjct: 9001164 gaactaaag 9001156



 Score = 46.1 bits (23), Expect = 0.70
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                          
Query: 1088    cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggcc 1146
               |||||||| || ||||||||||| |||||||| || ||||| || |  |||||||||||
Sbjct: 9002116 cggtccccttcaccaggaagacgtaggccacggtctccatctccgggtagacgcaggcc 9002058



to top

>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09,
              complete sequence
          Length = 143595

 Score =  157 bits (79), Expect = 3e-34
 Identities = 133/151 (88%)
 Strand = Plus / Minus

                                                                          
Query: 335    atacagatccagctgacggggttcatggagaagaatacaataaagttcatgagggagctg 394
              |||||||| |||||||| || |||||||||||||| ||| | |||||||||| |||||||
Sbjct: 131288 atacagatacagctgacaggattcatggagaagaacacagtgaagttcatgaaggagctg 131229

                                                                          
Query: 395    tggagcctccttctaagtgcgcagcagaatgccagtggtgtgccccagcaatttttggat 454
              ||||||||||| || ||||| || |||||||| ||||| |||||||| || ||||| |||
Sbjct: 131228 tggagcctcctactcagtgcacaacagaatgctagtggggtgccccaacagtttttagat 131169

                                             
Query: 455    gcaaaggaggctgagattcagcagagaaagg 485
              |||||||| |||||||||||||||| |||||
Sbjct: 131168 gcaaaggaagctgagattcagcagaaaaagg 131138



 Score =  125 bits (63), Expect = 9e-25
 Identities = 105/119 (88%)
 Strand = Plus / Minus

                                                                          
Query: 191    caggtggacatgtcaaaggtgaagatggacgtgatgaagccgtggattgccacacgggtc 250
              |||||||||||| | |||||||||||||| |||||||| || ||||| || || || |||
Sbjct: 131986 caggtggacatgactaaggtgaagatggatgtgatgaaaccatggatcgcgacccgtgtc 131927

                                                                         
Query: 251    actgagcttcttgggttcgaggacgaagtgcttatcaacttcatctacggcctgctcga 309
              || ||||| || |||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 131926 accgagctcctagggttcgaggacgaagtgctcatcaacttcatctacggcctcctcga 131868



 Score =  115 bits (58), Expect = 9e-22
 Identities = 82/90 (91%)
 Strand = Plus / Minus

                                                                          
Query: 2726   gaagtgtgctcatatgatacctgtttaatgttctgtatgtttatgtggcagttgatctga 2785
              |||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 126860 gaagtgtgcttatatgactcctatttaatgttctgtatgtttacgtggcagttgacctga 126801

                                            
Query: 2786   gtaattgacgattcctgagctgtttccttg 2815
              |||||||| |||||||||||||||| ||||
Sbjct: 126800 gtaattgaggattcctgagctgtttgcttg 126771



 Score =  113 bits (57), Expect = 4e-21
 Identities = 125/147 (85%), Gaps = 3/147 (2%)
 Strand = Plus / Minus

                                                                          
Query: 2071   cagttcaggctcagaagaatctgagaaacacagatcccagtctgagaagcgaagacataa 2130
              ||||||||| ||||||||||| | |||||| |||||||| |||||||||||||  |||||
Sbjct: 127357 cagttcaggttcagaagaatcagggaaacatagatcccattctgagaagcgaaagcataa 127298

                                                                          
Query: 2131   aaagggtcacaagcataagaagcattatgatgatagttctgat---tctgattctgactc 2187
              |||| | |  ||||||||||  | ||||||||| |||||||||   ||| |||| || ||
Sbjct: 127297 aaagagccgtaagcataagagacgttatgatgacagttctgatgaatctaattcggagtc 127238

                                         
Query: 2188   agatgacaaggagtccaagaggaggag 2214
              ||||||||| |||||||||||||||||
Sbjct: 127237 agatgacaaagagtccaagaggaggag 127211



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                          
Query: 2333   tcagatcttgagaaggatcgtcaatctggctcagacgctgatgttgggaagaaaggttca 2392
              ||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||
Sbjct: 127086 tcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggttca 127027

                
Query: 2393   ta 2394
              ||
Sbjct: 127026 ta 127025



 Score = 79.8 bits (40), Expect = 5e-11
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                          
Query: 103    ggggacgtcggccgaccaggataccagattctccaacaagcatgccaagttgctgaagac 162
              ||||||||||||||| ||||| ||| | |||||||||||||| || ||| |||| |||||
Sbjct: 132197 ggggacgtcggccgatcaggacacccgtttctccaacaagcaggcgaagctgctcaagac 132138

                                      
Query: 163    acagaagttcgcgtctgagcttga 186
               |||||||||||| | ||||||||
Sbjct: 132137 gcagaagttcgcgcccgagcttga 132114



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                          
Query: 806    tcagcttcacctagacgttctgtttccccccgaaggcattccccaagaatcgctccttca 865
              |||| ||||||||| |||||| |||| || |||| || ||| |||||||   | ||||| 
Sbjct: 129544 tcagtttcacctaggcgttctttttctccacgaaagcgttctccaagaagtaccccttcg 129485

                                                             
Query: 866    atgtctaggcggaggtcaccgtattccaggagatcaccttcggtacc 912
              ||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 129484 atgtcgaggcggagatcaccgtattccagaagatcaccttcagtacc 129438



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                          
Query: 2496   cttcagatgttgagaaggaccatgaatctgactcggatgctgatgttaggaagagagttt 2555
              |||||||| |||||||||| | |||||||||||| |||||||||| |||||||| || ||
Sbjct: 127088 cttcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggtt 127029

                  
Query: 2556   cata 2559
              ||||
Sbjct: 127028 cata 127025



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 496    tagaattgcccaggagatccagaagaagcgagagaaagatggtagggacgcagaactaga 555
              ||||||||| ||||||||||||||||| || ||||||||||| |||||   |||||||||
Sbjct: 130688 tagaattgctcaggagatccagaagaaacgggagaaagatggaagggagcaagaactaga 130629

                   
Query: 556    taaac 560
               ||||
Sbjct: 130628 gaaac 130624



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 1088   cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccg 1147
              |||||||| || ||||||||||| |||||||| ||||| ||||| | |||||| ||||| 
Sbjct: 129172 cggtccccttcaccaggaagacgtaggccacggtccccttcaccaggaagacgtaggcca 129113

                         
Query: 1148   cggtccccatc 1158
              ||||| |||||
Sbjct: 129112 cggtctccatc 129102



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                          
Query: 1089   ggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccgc 1148
              |||| ||||||||||||||||| ||||| || ||||| ||||| | | |||| ||||| |
Sbjct: 129261 ggtctccatctccaggaagacgtaggcctcggtccccttcacccggacgacgtaggccac 129202

                           
Query: 1149   ggtccccatcacc 1161
              ||||||| |||||
Sbjct: 129201 ggtccccttcacc 129189



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                       
Query: 641    gatgctgagaaagaaaaggaactggacttgaagcatagctcgagaacaaagagccgg 697
              ||||||||| | ||||| |||||||| |  ||||||||||| |||||||||||||||
Sbjct: 130430 gatgctgaggaggaaaaagaactggattctaagcatagctcaagaacaaagagccgg 130374



 Score = 50.1 bits (25), Expect = 0.045
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                          
Query: 1616   gagaatgcacggaaggccaattcatcacgcaggatatccaaggatttctcagctgatctg 1675
              ||||||||||| || || |||||||||||||| | |   |||||||||||||| ||||||
Sbjct: 128250 gagaatgcacgaaaagcaaattcatcacgcagaaaaattaaggatttctcagcagatctg 128191

                       
Query: 1676   caaccaaag 1684
               ||| ||||
Sbjct: 128190 gaactaaag 128182



 Score = 46.1 bits (23), Expect = 0.70
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 1088   cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggcc 1146
              |||||||| || ||||||||||| |||||||| || ||||| || |  |||||||||||
Sbjct: 129142 cggtccccttcaccaggaagacgtaggccacggtctccatctccgggtagacgcaggcc 129084



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>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08,
             complete sequence
          Length = 99910

 Score =  157 bits (79), Expect = 3e-34
 Identities = 133/151 (88%)
 Strand = Plus / Minus

                                                                         
Query: 335   atacagatccagctgacggggttcatggagaagaatacaataaagttcatgagggagctg 394
             |||||||| |||||||| || |||||||||||||| ||| | |||||||||| |||||||
Sbjct: 13463 atacagatacagctgacaggattcatggagaagaacacagtgaagttcatgaaggagctg 13404

                                                                         
Query: 395   tggagcctccttctaagtgcgcagcagaatgccagtggtgtgccccagcaatttttggat 454
             ||||||||||| || ||||| || |||||||| ||||| |||||||| || ||||| |||
Sbjct: 13403 tggagcctcctactcagtgcacaacagaatgctagtggggtgccccaacagtttttagat 13344

                                            
Query: 455   gcaaaggaggctgagattcagcagagaaagg 485
             |||||||| |||||||||||||||| |||||
Sbjct: 13343 gcaaaggaagctgagattcagcagaaaaagg 13313



 Score =  125 bits (63), Expect = 9e-25
 Identities = 105/119 (88%)
 Strand = Plus / Minus

                                                                         
Query: 191   caggtggacatgtcaaaggtgaagatggacgtgatgaagccgtggattgccacacgggtc 250
             |||||||||||| | |||||||||||||| |||||||| || ||||| || || || |||
Sbjct: 14161 caggtggacatgactaaggtgaagatggatgtgatgaaaccatggatcgcgacccgtgtc 14102

                                                                        
Query: 251   actgagcttcttgggttcgaggacgaagtgcttatcaacttcatctacggcctgctcga 309
             || ||||| || |||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 14101 accgagctcctagggttcgaggacgaagtgctcatcaacttcatctacggcctcctcga 14043



 Score =  115 bits (58), Expect = 9e-22
 Identities = 82/90 (91%)
 Strand = Plus / Minus

                                                                        
Query: 2726 gaagtgtgctcatatgatacctgtttaatgttctgtatgtttatgtggcagttgatctga 2785
            |||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 9035 gaagtgtgcttatatgactcctatttaatgttctgtatgtttacgtggcagttgacctga 8976

                                          
Query: 2786 gtaattgacgattcctgagctgtttccttg 2815
            |||||||| |||||||||||||||| ||||
Sbjct: 8975 gtaattgaggattcctgagctgtttgcttg 8946



 Score =  113 bits (57), Expect = 4e-21
 Identities = 125/147 (85%), Gaps = 3/147 (2%)
 Strand = Plus / Minus

                                                                        
Query: 2071 cagttcaggctcagaagaatctgagaaacacagatcccagtctgagaagcgaagacataa 2130
            ||||||||| ||||||||||| | |||||| |||||||| |||||||||||||  |||||
Sbjct: 9532 cagttcaggttcagaagaatcagggaaacatagatcccattctgagaagcgaaagcataa 9473

                                                                        
Query: 2131 aaagggtcacaagcataagaagcattatgatgatagttctgat---tctgattctgactc 2187
            |||| | |  ||||||||||  | ||||||||| |||||||||   ||| |||| || ||
Sbjct: 9472 aaagagccgtaagcataagagacgttatgatgacagttctgatgaatctaattcggagtc 9413

                                       
Query: 2188 agatgacaaggagtccaagaggaggag 2214
            ||||||||| |||||||||||||||||
Sbjct: 9412 agatgacaaagagtccaagaggaggag 9386



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                        
Query: 2333 tcagatcttgagaaggatcgtcaatctggctcagacgctgatgttgggaagaaaggttca 2392
            ||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||
Sbjct: 9261 tcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggttca 9202

              
Query: 2393 ta 2394
            ||
Sbjct: 9201 ta 9200



 Score = 79.8 bits (40), Expect = 5e-11
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                         
Query: 103   ggggacgtcggccgaccaggataccagattctccaacaagcatgccaagttgctgaagac 162
             ||||||||||||||| ||||| ||| | |||||||||||||| || ||| |||| |||||
Sbjct: 14372 ggggacgtcggccgatcaggacacccgtttctccaacaagcaggcgaagctgctcaagac 14313

                                     
Query: 163   acagaagttcgcgtctgagcttga 186
              |||||||||||| | ||||||||
Sbjct: 14312 gcagaagttcgcgcccgagcttga 14289



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                         
Query: 806   tcagcttcacctagacgttctgtttccccccgaaggcattccccaagaatcgctccttca 865
             |||| ||||||||| |||||| |||| || |||| || ||| |||||||   | ||||| 
Sbjct: 11719 tcagtttcacctaggcgttctttttctccacgaaagcgttctccaagaagtaccccttcg 11660

                                                            
Query: 866   atgtctaggcggaggtcaccgtattccaggagatcaccttcggtacc 912
             ||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 11659 atgtcgaggcggagatcaccgtattccagaagatcaccttcagtacc 11613



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 2496 cttcagatgttgagaaggaccatgaatctgactcggatgctgatgttaggaagagagttt 2555
            |||||||| |||||||||| | |||||||||||| |||||||||| |||||||| || ||
Sbjct: 9263 cttcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggtt 9204

                
Query: 2556 cata 2559
            ||||
Sbjct: 9203 cata 9200



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 496   tagaattgcccaggagatccagaagaagcgagagaaagatggtagggacgcagaactaga 555
             ||||||||| ||||||||||||||||| || ||||||||||| |||||   |||||||||
Sbjct: 12863 tagaattgctcaggagatccagaagaaacgggagaaagatggaagggagcaagaactaga 12804

                  
Query: 556   taaac 560
              ||||
Sbjct: 12803 gaaac 12799



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1088  cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccg 1147
             |||||||| || ||||||||||| |||||||| ||||| ||||| | |||||| ||||| 
Sbjct: 11347 cggtccccttcaccaggaagacgtaggccacggtccccttcaccaggaagacgtaggcca 11288

                        
Query: 1148  cggtccccatc 1158
             ||||| |||||
Sbjct: 11287 cggtctccatc 11277



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                         
Query: 1089  ggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccgc 1148
             |||| ||||||||||||||||| ||||| || ||||| ||||| | | |||| ||||| |
Sbjct: 11436 ggtctccatctccaggaagacgtaggcctcggtccccttcacccggacgacgtaggccac 11377

                          
Query: 1149  ggtccccatcacc 1161
             ||||||| |||||
Sbjct: 11376 ggtccccttcacc 11364



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 641   gatgctgagaaagaaaaggaactggacttgaagcatagctcgagaacaaagagccgg 697
             ||||||||| | ||||| |||||||| |  ||||||||||| |||||||||||||||
Sbjct: 12605 gatgctgaggaggaaaaagaactggattctaagcatagctcaagaacaaagagccgg 12549



 Score = 50.1 bits (25), Expect = 0.045
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                         
Query: 1616  gagaatgcacggaaggccaattcatcacgcaggatatccaaggatttctcagctgatctg 1675
             ||||||||||| || || |||||||||||||| | |   |||||||||||||| ||||||
Sbjct: 10425 gagaatgcacgaaaagcaaattcatcacgcagaaaaattaaggatttctcagcagatctg 10366

                      
Query: 1676  caaccaaag 1684
              ||| ||||
Sbjct: 10365 gaactaaag 10357



 Score = 46.1 bits (23), Expect = 0.70
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 1088  cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggcc 1146
             |||||||| || ||||||||||| |||||||| || ||||| || |  |||||||||||
Sbjct: 11317 cggtccccttcaccaggaagacgtaggccacggtctccatctccgggtagacgcaggcc 11259



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>dbj|AK060809.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G06, full
            insert sequence
          Length = 2169

 Score =  115 bits (58), Expect = 9e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2726 gaagtgtgctcatatgatacctgtttaatgttctgtatgtttatgtggcagttgatctga 2785
            |||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 1985 gaagtgtgcttatatgactcctatttaatgttctgtatgtttacgtggcagttgacctga 2044

                                          
Query: 2786 gtaattgacgattcctgagctgtttccttg 2815
            |||||||| |||||||||||||||| ||||
Sbjct: 2045 gtaattgaggattcctgagctgtttgcttg 2074



 Score =  113 bits (57), Expect = 4e-21
 Identities = 125/147 (85%), Gaps = 3/147 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2071 cagttcaggctcagaagaatctgagaaacacagatcccagtctgagaagcgaagacataa 2130
            ||||||||| ||||||||||| | |||||| |||||||| |||||||||||||  |||||
Sbjct: 1488 cagttcaggttcagaagaatcagggaaacatagatcccattctgagaagcgaaagcataa 1547

                                                                        
Query: 2131 aaagggtcacaagcataagaagcattatgatgatagttctgat---tctgattctgactc 2187
            |||| | |  ||||||||||  | ||||||||| |||||||||   ||| |||| || ||
Sbjct: 1548 aaagagccgtaagcataagagacgttatgatgacagttctgatgaatctaattcggagtc 1607

                                       
Query: 2188 agatgacaaggagtccaagaggaggag 2214
            ||||||||| |||||||||||||||||
Sbjct: 1608 agatgacaaagagtccaagaggaggag 1634



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2333 tcagatcttgagaaggatcgtcaatctggctcagacgctgatgttgggaagaaaggttca 2392
            ||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||
Sbjct: 1759 tcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggttca 1818

              
Query: 2393 ta 2394
            ||
Sbjct: 1819 ta 1820



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 90/107 (84%)
 Strand = Plus / Plus

                                                                       
Query: 806 tcagcttcacctagacgttctgtttccccccgaaggcattccccaagaatcgctccttca 865
           |||| ||||||||| |||||| |||| || |||| || ||| |||||||   | ||||| 
Sbjct: 115 tcagtttcacctaggcgttctttttctccacgaaagcgttctccaagaagtaccccttcg 174

                                                          
Query: 866 atgtctaggcggaggtcaccgtattccaggagatcaccttcggtacc 912
           ||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 175 atgtcgaggcggagatcaccgtattccagaagatcaccttcagtacc 221



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2496 cttcagatgttgagaaggaccatgaatctgactcggatgctgatgttaggaagagagttt 2555
            |||||||| |||||||||| | |||||||||||| |||||||||| |||||||| || ||
Sbjct: 1757 cttcagatcttgagaaggatcgtgaatctgactcagatgctgatgctaggaagaaaggtt 1816

                
Query: 2556 cata 2559
            ||||
Sbjct: 1817 cata 1820



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1088 cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccg 1147
            |||||||| || ||||||||||| |||||||| ||||| ||||| | |||||| ||||| 
Sbjct: 487  cggtccccttcaccaggaagacgtaggccacggtccccttcaccaggaagacgtaggcca 546

                       
Query: 1148 cggtccccatc 1158
            ||||| |||||
Sbjct: 547  cggtctccatc 557



 Score = 60.0 bits (30), Expect = 5e-05
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1607 cgtgcaagggagaatgcacggaaggccaattcatcacgcaggatatccaaggatttctca 1666
            |||||||| ||||||||||| || || |||||||||||||| | |   ||||||||||||
Sbjct: 1042 cgtgcaagagagaatgcacgaaaagcaaattcatcacgcagaaaaattaaggatttctca 1101

                              
Query: 1667 gctgatctgcaaccaaag 1684
            || |||||| ||| ||||
Sbjct: 1102 gcagatctggaactaaag 1119



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1089 ggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccgc 1148
            |||| ||||||||||||||||| ||||| || ||||| ||||| | | |||| ||||| |
Sbjct: 398  ggtctccatctccaggaagacgtaggcctcggtccccttcacccggacgacgtaggccac 457

                         
Query: 1149 ggtccccatcacc 1161
            ||||||| |||||
Sbjct: 458  ggtccccttcacc 470



 Score = 46.1 bits (23), Expect = 0.70
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1088 cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggcc 1146
            |||||||| || ||||||||||| |||||||| || ||||| || |  |||||||||||
Sbjct: 517  cggtccccttcaccaggaagacgtaggccacggtctccatctccgggtagacgcaggcc 575



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>gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence
          Length = 132140

 Score = 89.7 bits (45), Expect = 5e-14
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                         
Query: 103   ggggacgtcggccgaccaggataccagattctccaacaagcatgccaagttgctgaagac 162
             |||||||||  | ||||||||||| || ||||| || ||| | ||||||||||| |||||
Sbjct: 76746 ggggacgtccactgaccaggatacaagcttctcaaataagtaagccaagttgctcaagac 76805

                                          
Query: 163   acagaagttcgcgtctgagcttgaccatc 191
              ||||||||||||||||||||||||||||
Sbjct: 76806 gcagaagttcgcgtctgagcttgaccatc 76834



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 60/66 (90%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                         
Query: 202   gtcaaaggtgaagatggacgtgatgaagccgtggattgccacacgggtcactgagcttct 261
             ||||||||| ||| |||||||||||||||| ||||||||||  |||||||||||||| ||
Sbjct: 76978 gtcaaaggtcaagttggacgtgatgaagcc-tggattgccaagcgggtcactgagctact 77036

                   
Query: 262   tgggtt 267
             ||||||
Sbjct: 77037 tgggtt 77042



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>gb|AY109810.1| Zea mays CL5193_1 mRNA sequence
          Length = 1219

 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 55/60 (91%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                        
Query: 2726 gaagtgtgctcatatgatacctgtttaatgttctgtatgtttatgtggcagttgatctga 2785
            ||||||| || ||||||||| | ||||||||||||| |||||||||||||||||||||||
Sbjct: 1034 gaagtgtccttatatgatac-tatttaatgttctgtgtgtttatgtggcagttgatctga 1092



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                        
Query: 2072 agttcaggctcagaagaatctgagaaacacagatcccagtctgagaagcgaagacataaa 2131
            |||||||| || |||||  |||| ||||| ||| |||| || ||||||||||| |  || 
Sbjct: 560  agttcagggtctgaagagcctgacaaacatagaacccactcggagaagcgaaggcccaag 619

                                                                 
Query: 2132 aagggtcacaagcataagaagcattatgatgatagttctgattctgattctga 2184
            ||   ||| ||||||||||| || |||||||||||||| || |||||||||||
Sbjct: 620  aaaactcataagcataagaaacagtatgatgatagttccgagtctgattctga 672



 Score = 52.0 bits (26), Expect = 0.011
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 2258 cgtgaagaacggcaccgcagaagggcggaccgtcatgccagtaaac 2303
            ||||||||||| |||||||||||||| || || |||||||| ||||
Sbjct: 749  cgtgaagaacgacaccgcagaagggcagaacgccatgccagcaaac 794



 Score = 48.1 bits (24), Expect = 0.18
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2522 tctgactcggatgctgatgttaggaagagagtttcataggctggctgagaagaatctgat 2581
            ||||| || |||| |||||||||||| ||||||||| | |||||  ||||||| ||||||
Sbjct: 854  tctgattcagatggtgatgttaggaaaagagtttcaaacgctggaagagaagagtctgat 913



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>ref|NM_001056218.1| Oryza sativa (japonica cultivar-group) Os03g0270300 (Os03g0270300)
           mRNA, complete cds
          Length = 432

 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 860 ccttcaatgtctaggcggaggtcaccgtattccaggagatcaccttcggtacc 912
           ||||| ||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 388 ccttcgatgtcgaggcggagatcaccgtattccagaagatcaccttcagtacc 336



 Score = 60.0 bits (30), Expect = 5e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                        
Query: 1088 cggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccg 1147
            |||||||| || ||||||||||| |||||||| ||||| ||||| | |||||| ||||| 
Sbjct: 70   cggtccccttcaccaggaagacgtaggccacggtccccttcaccaggaagacgtaggcca 11

                      
Query: 1148 cggtccccat 1157
            ||||| ||||
Sbjct: 10   cggtctccat 1



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                        
Query: 1089 ggtccccatctccaggaagacgcaggccacgatccccatcacctgtaagacgcaggccgc 1148
            |||| ||||||||||||||||| ||||| || ||||| ||||| | | |||| ||||| |
Sbjct: 159  ggtctccatctccaggaagacgtaggcctcggtccccttcacccggacgacgtaggccac 100

                         
Query: 1149 ggtccccatcacc 1161
            ||||||| |||||
Sbjct: 99   ggtccccttcacc 87



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>ref|NM_128477.2| Arabidopsis thaliana unknown protein (AT2G29210) mRNA, complete cds
          Length = 2913

 Score = 52.0 bits (26), Expect = 0.011
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 209 gtgaagatggacgtgatgaagccgtggattgccacacgggtcactgagcttcttgggttc 268
           ||||||||||| || ||||| || |||||||| ||  | |||||||||||||||||  | 
Sbjct: 223 gtgaagatggatgttatgaaaccttggattgcgactagagtcactgagcttcttggtatt 282

                                                 
Query: 269 gaggacgaagtgcttatcaacttcatctacggcctgct 306
           || || |||||||| || ||||| ||||| || |||||
Sbjct: 283 gaagatgaagtgctgattaactttatctatggtctgct 320



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>gb|BT000633.1| Arabidopsis thaliana putative proline-rich protein
           (At2g29210/F16P2.41) mRNA, complete cds
          Length = 2637

 Score = 52.0 bits (26), Expect = 0.011
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 209 gtgaagatggacgtgatgaagccgtggattgccacacgggtcactgagcttcttgggttc 268
           ||||||||||| || ||||| || |||||||| ||  | |||||||||||||||||  | 
Sbjct: 127 gtgaagatggatgttatgaaaccttggattgcgactagagtcactgagcttcttggtatt 186

                                                 
Query: 269 gaggacgaagtgcttatcaacttcatctacggcctgct 306
           || || |||||||| || ||||| ||||| || |||||
Sbjct: 187 gaagatgaagtgctgattaactttatctatggtctgct 224



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>gb|AY125501.1| Arabidopsis thaliana At2g29210/F16P2.41 mRNA, complete cds
          Length = 2884

 Score = 52.0 bits (26), Expect = 0.011
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 209 gtgaagatggacgtgatgaagccgtggattgccacacgggtcactgagcttcttgggttc 268
           ||||||||||| || ||||| || |||||||| ||  | |||||||||||||||||  | 
Sbjct: 223 gtgaagatggatgttatgaaaccttggattgcgactagagtcactgagcttcttggtatt 282

                                                 
Query: 269 gaggacgaagtgcttatcaacttcatctacggcctgct 306
           || || |||||||| || ||||| ||||| || |||||
Sbjct: 283 gaagatgaagtgctgattaactttatctatggtctgct 320



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>gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map ve014, complete
              sequence
          Length = 131743

 Score = 52.0 bits (26), Expect = 0.011
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                          
Query: 209    gtgaagatggacgtgatgaagccgtggattgccacacgggtcactgagcttcttgggttc 268
              ||||||||||| || ||||| || |||||||| ||  | |||||||||||||||||  | 
Sbjct: 101175 gtgaagatggatgttatgaaaccttggattgcgactagagtcactgagcttcttggtatt 101116

                                                    
Query: 269    gaggacgaagtgcttatcaacttcatctacggcctgct 306
              || || |||||||| || ||||| ||||| || |||||
Sbjct: 101115 gaagatgaagtgctgattaactttatctatggtctgct 101078



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>emb|AJ292982.1|ATH292982 Arabidopsis thaliana mRNA for SRM102
          Length = 2883

 Score = 52.0 bits (26), Expect = 0.011
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 209 gtgaagatggacgtgatgaagccgtggattgccacacgggtcactgagcttcttgggttc 268
           ||||||||||| || ||||| || |||||||| ||  | |||||||||||||||||  | 
Sbjct: 223 gtgaagatggatgttatgaaaccttggattgcgactagagtcactgagcttcttggtatt 282

                                                 
Query: 269 gaggacgaagtgcttatcaacttcatctacggcctgct 306
           || || |||||||| || ||||| ||||| || |||||
Sbjct: 283 gaagatgaagtgctgattaactttatctatggtctgct 320



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>ref|NM_198817.1| Danio rerio starmaker (stm), mRNA
 gb|AY372242.1| Danio rerio starmaker mRNA, complete cds
          Length = 3066

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 2168 tctgattctgattctgactcagat 2191
            ||||||||||||||||||||||||
Sbjct: 1392 tctgattctgattctgactcagat 1415



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>ref|XM_001215915.1| Aspergillus terreus NIH2624 NADH-ubiquinone oxidoreductase 21 kDa
           subunit, mitochondrial precursor (ATEG_06737) mRNA,
           complete cds
          Length = 660

 Score = 46.1 bits (23), Expect = 0.70
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 253 tgagcttcttgggttcgaggacgaagt 279
           ||||||||||||||||| |||||||||
Sbjct: 640 tgagcttcttgggttcgtggacgaagt 614



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>ref|XM_631574.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0219360)
            mRNA, partial cds
          Length = 972

 Score = 46.1 bits (23), Expect = 0.70
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 2167 ttctgattctgattctgactcagatga 2193
            ||||||||||||||||||||| |||||
Sbjct: 342  ttctgattctgattctgactctgatga 316



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.70
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 2127     ataaaaagggtcacaagcataag 2149
                |||||||||||||||||||||||
Sbjct: 11337059 ataaaaagggtcacaagcataag 11337037



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>gb|AC026434.5| Homo sapiens chromosome 5 clone CTD-2244C20, complete sequence
          Length = 99385

 Score = 46.1 bits (23), Expect = 0.70
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 2008 tggtggaagtcctcttcaaaaagctaagaaaagaa 2042
            ||||| || ||||||||||||||| ||||||||||
Sbjct: 6110 tggtgcaattcctcttcaaaaagcaaagaaaagaa 6144



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>gb|AC034233.5| Homo sapiens chromosome 5 clone CTD-2251M10, complete sequence
          Length = 168963

 Score = 46.1 bits (23), Expect = 0.70
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 2008   tggtggaagtcctcttcaaaaagctaagaaaagaa 2042
              ||||| || ||||||||||||||| ||||||||||
Sbjct: 115173 tggtgcaattcctcttcaaaaagcaaagaaaagaa 115207



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>gb|AC016599.6| Homo sapiens chromosome 5 clone CTD-2054D19, complete sequence
          Length = 173736

 Score = 46.1 bits (23), Expect = 0.70
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 2008   tggtggaagtcctcttcaaaaagctaagaaaagaa 2042
              ||||| || ||||||||||||||| ||||||||||
Sbjct: 121544 tggtgcaattcctcttcaaaaagcaaagaaaagaa 121578



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>gb|AC010379.5|AC010379 Homo sapiens chromosome 5 clone CTD-2064M2, complete sequence
          Length = 90113

 Score = 46.1 bits (23), Expect = 0.70
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 2008 tggtggaagtcctcttcaaaaagctaagaaaagaa 2042
            ||||| || ||||||||||||||| ||||||||||
Sbjct: 613  tggtgcaattcctcttcaaaaagcaaagaaaagaa 579



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>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1386G10
          Length = 121827

 Score = 46.1 bits (23), Expect = 0.70
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 2127  ataaaaagggtcacaagcataag 2149
             |||||||||||||||||||||||
Sbjct: 24768 ataaaaagggtcacaagcataag 24746



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>ref|XR_023204.1| PREDICTED: Pan troglodytes similar to NOLC1 protein (LOC473514), mRNA
          Length = 2091

 Score = 44.1 bits (22), Expect = 2.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 2167 ttctgattctgattctgactca 2188
            ||||||||||||||||||||||
Sbjct: 478  ttctgattctgattctgactca 499



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>ref|XR_019523.1| PREDICTED: Homo sapiens similar to Nucleolar phosphoprotein p130
            (Nucleolar 130 kDa protein) (140 kDa nucleolar
            phosphoprotein) (Nopp140) (Nucleolar and coiled-body
            phosphoprotein 1) (LOC392426), mRNA
          Length = 2084

 Score = 44.1 bits (22), Expect = 2.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 2167 ttctgattctgattctgactca 2188
            ||||||||||||||||||||||
Sbjct: 478  ttctgattctgattctgactca 499



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>ref|XR_016896.1| PREDICTED: Homo sapiens similar to Nucleolar phosphoprotein p130
            (Nucleolar 130 kDa protein) (140 kDa nucleolar
            phosphoprotein) (Nopp140) (Nucleolar and coiled-body
            phosphoprotein 1) (LOC392426), mRNA
          Length = 2084

 Score = 44.1 bits (22), Expect = 2.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 2167 ttctgattctgattctgactca 2188
            ||||||||||||||||||||||
Sbjct: 478  ttctgattctgattctgactca 499



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>emb|CT009601.13| Mouse DNA sequence from clone RP23-38D2 on chromosome 14, complete
              sequence
          Length = 223345

 Score = 44.1 bits (22), Expect = 2.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2076   caggctcagaagaatctgagaa 2097
              ||||||||||||||||||||||
Sbjct: 142913 caggctcagaagaatctgagaa 142934



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>gb|AC183548.3| Pan troglodytes BAC clone CH251-199C23 from chromosome 22, complete
             sequence
          Length = 180136

 Score = 44.1 bits (22), Expect = 2.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 473   cagcagagaaaggcggaagagg 494
             ||||||||||||||||||||||
Sbjct: 29645 cagcagagaaaggcggaagagg 29666



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>ref|XM_587482.2| PREDICTED: Bos taurus hypothetical LOC539475 (LOC539475), mRNA
          Length = 2251

 Score = 44.1 bits (22), Expect = 2.7
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 2168 tctgattctgattctgactcagatga 2193
            ||||||||||| ||||||||||||||
Sbjct: 614  tctgattctgactctgactcagatga 589



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>gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequence
          Length = 145016

 Score = 44.1 bits (22), Expect = 2.7
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 473    cagcagagaaaggcggaagagg 494
              ||||||||||||||||||||||
Sbjct: 116040 cagcagagaaaggcggaagagg 116019



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>gb|AY042083.1| Plasmodium vivax erythrocyte binding proteins (maebl) gene, complete
            cds; alternatively spliced
          Length = 7083

 Score = 44.1 bits (22), Expect = 2.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 479  agaaaggcggaagaggctagaa 500
            ||||||||||||||||||||||
Sbjct: 4147 agaaaggcggaagaggctagaa 4168



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>gb|AC074281.20| Homo sapiens X BAC RP11-66N5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 137628

 Score = 44.1 bits (22), Expect = 2.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2167  ttctgattctgattctgactca 2188
             ||||||||||||||||||||||
Sbjct: 60354 ttctgattctgattctgactca 60375


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 512,954,912
Number of extensions: 28010908
Number of successful extensions: 138212
Number of sequences better than 10.0: 33
Number of HSP's gapped: 138196
Number of HSP's successfully gapped: 130
Length of query: 2834
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2811
Effective length of database: 18,503,978,556
Effective search space: 52014683720916
Effective search space used: 52014683720916
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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