ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK070432:Os06g0683200 325 3e-89
2AK060024:Os06g0683200 325 3e-89
3AK121443:Os11g0139100 73 2e-13
4Os12g0135900:Os12g0135900 53 3e-07
5AK105075:Os12g0150100 35 0.055
6Os12g0126300:Os12g0126300 32 0.79
7AK119446:Os01g0912900 31 1.0
8AK121546:Os11g0151300 31 1.0
9AK067220:Os02g0632700 31 1.3
10AK102079:Os05g0383000 30 1.8
11AK058345:Os05g0383000 30 1.8
12AJ575217:Os11g0129700 30 3.0
13Os01g0374200:Os01g0374200 29 3.9
14Os05g0576500:Os05g0576500 29 5.1
15AK101290:Os03g0304500 29 5.1
16AK110309: 28 6.7
17AK111960:Os04g0594100 28 6.7
18Os03g0803600:Os03g0803600 28 8.7
19AK109984: 28 8.7
20AK119859: 28 8.8
21AY323480:Os07g0629000 28 8.8
22AK101113:Os03g0689400 28 8.8

>AK070432:Os06g0683200 |
          Length = 190
 Score =  325 bits (833), Expect = 3e-89
 Identities = 160/191 (83%), Positives = 177/191 (92%), Gaps = 3/191 (1%)
 Frame = +1

Query: 100 MAGMVALQGAMGALSVSA---ASTSAFWGNPLAATFSSAPSGVRFMAKTSPIEMRLKRWE 270
           MAG+ ALQGAM +LS+SA   ASTS+FWG+PL+ TF++AP+GV+FM KT PI+MRLKRWE
Sbjct: 1   MAGVAALQGAMASLSISAPGAASTSSFWGHPLS-TFAAAPAGVKFMIKTCPIQMRLKRWE 59

Query: 271 RKKCKPNSLPMLHKMHVRVGDTVQVIAGREKGKVGEVVRLYKHNSTVIVKDLNLKSKHKK 450
           RKKCKPNSLP+LHKMHVR+GDTVQVIAGREKGKVGEV RL+KHNSTVIVKDLNLKSKHKK
Sbjct: 60  RKKCKPNSLPVLHKMHVRIGDTVQVIAGREKGKVGEVTRLFKHNSTVIVKDLNLKSKHKK 119

Query: 451 GTEDEPGEIVMIEGPIHSSNMMLYSKEKNVTSRVGHKILEDGTKVRYLKKTGEVIDSVDN 630
           GTEDEPGEIVMIEGPIHSSN+MLYSKEKNV SRVGHK LEDGTKVRYL KTGE+IDS +N
Sbjct: 120 GTEDEPGEIVMIEGPIHSSNVMLYSKEKNVASRVGHKFLEDGTKVRYLVKTGEIIDSAEN 179

Query: 631 WVKVFKEGDSE 663
           WVKVFKEG SE
Sbjct: 180 WVKVFKEGSSE 190



to top

>AK060024:Os06g0683200 |
          Length = 190

 Score =  325 bits (833), Expect = 3e-89
 Identities = 160/191 (83%), Positives = 177/191 (92%), Gaps = 3/191 (1%)
 Frame = +1

Query: 100 MAGMVALQGAMGALSVSA---ASTSAFWGNPLAATFSSAPSGVRFMAKTSPIEMRLKRWE 270
           MAG+ ALQGAM +LS+SA   ASTS+FWG+PL+ TF++AP+GV+FM KT PI+MRLKRWE
Sbjct: 1   MAGVAALQGAMASLSISAPGAASTSSFWGHPLS-TFAAAPAGVKFMIKTCPIQMRLKRWE 59

Query: 271 RKKCKPNSLPMLHKMHVRVGDTVQVIAGREKGKVGEVVRLYKHNSTVIVKDLNLKSKHKK 450
           RKKCKPNSLP+LHKMHVR+GDTVQVIAGREKGKVGEV RL+KHNSTVIVKDLNLKSKHKK
Sbjct: 60  RKKCKPNSLPVLHKMHVRIGDTVQVIAGREKGKVGEVTRLFKHNSTVIVKDLNLKSKHKK 119

Query: 451 GTEDEPGEIVMIEGPIHSSNMMLYSKEKNVTSRVGHKILEDGTKVRYLKKTGEVIDSVDN 630
           GTEDEPGEIVMIEGPIHSSN+MLYSKEKNV SRVGHK LEDGTKVRYL KTGE+IDS +N
Sbjct: 120 GTEDEPGEIVMIEGPIHSSNVMLYSKEKNVASRVGHKFLEDGTKVRYLVKTGEIIDSAEN 179

Query: 631 WVKVFKEGDSE 663
           WVKVFKEG SE
Sbjct: 180 WVKVFKEGSSE 190



to top

>AK121443:Os11g0139100 |
          Length = 159

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 36/90 (40%), Positives = 53/90 (58%)
 Frame = +1

Query: 328 GDTVQVIAGREKGKVGEVVRLYKHNSTVIVKDLNLKSKHKKGTEDEPGEIVMIEGPIHSS 507
           GD V +I G++KG+ G + R+ +  + VIV+  NL  KH K  E   G I  IE P+H S
Sbjct: 18  GDNVMIIRGKDKGESGLIKRVIRSQNRVIVEGKNLVKKHIKQGEGHTGGIFSIEAPLHVS 77

Query: 508 NMMLYSKEKNVTSRVGHKILEDGTKVRYLK 597
           N+ +         ++G+K LEDGTKVR+ +
Sbjct: 78  NVQVLDPVTGKPCKIGYKYLEDGTKVRFAR 107



to top

>Os12g0135900:Os12g0135900 |
          Length = 126

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +1

Query: 328 GDTVQVIAGREKGKVGEVVRLYKHNSTVIVKDLNLKSKHKKGTEDEPGEIVMIEGPIHSS 507
           GD V +I G++KG+ G + R+ +  + VIV+  NL  KH K  E   G I  IE P+H S
Sbjct: 18  GDNVMIIRGKDKGESGLIKRVIRSQNRVIVEGKNLVKKHIKQGEGHTGGIFSIEAPLHVS 77

Query: 508 NMML 519
           N+ +
Sbjct: 78  NVQV 81



to top

>AK105075:Os12g0150100 |
          Length = 150

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 23/73 (31%), Positives = 38/73 (52%)
 Frame = +1

Query: 202 SAPSGVRFMAKTSPIEMRLKRWERKKCKPNSLPMLHKMHVRVGDTVQVIAGREKGKVGEV 381
           +APS VR +  ++ +   L    R K    S+P      +R  D VQV+ G  KG+ G+V
Sbjct: 20  TAPSSVRRVLMSAALSTEL----RHKYNVRSIP------IRKDDEVQVVRGSYKGREGKV 69

Query: 382 VRLYKHNSTVIVK 420
           V++Y+    + V+
Sbjct: 70  VQVYRRRWVIHVE 82



to top

>Os12g0126300:Os12g0126300 |
          Length = 443

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -3

Query: 233 LAMNLTPDGAEEKVAASGLPQKALVLAAETESAPMA-PCS-ATMPAIVAAGPHSLRPRRE 60
           +A   +PD A    +AS  P      ++E  S+PM+ PC     P    +   + RP++E
Sbjct: 1   MAKRSSPDPASSSPSASSSPSSPSSSSSEDSSSPMSMPCKRRARPRTEKSTGKAKRPKKE 60

Query: 59  SRGAAD 42
           S+  AD
Sbjct: 61  SKEVAD 66



to top

>AK119446:Os01g0912900 |
          Length = 533

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = -3

Query: 191 AASGLPQKALVLAAETESAPMAPCSATMPAIVAA 90
           A SG+P+++L L  E E+A + P +ATM  +++A
Sbjct: 252 AQSGVPKESLALFREMEAAGIEPDAATMVGVISA 285



to top

>AK121546:Os11g0151300 |
          Length = 163

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 22/74 (29%), Positives = 34/74 (45%)
 Frame = +1

Query: 199 SSAPSGVRFMAKTSPIEMRLKRWERKKCKPNSLPMLHKMHVRVGDTVQVIAGREKGKVGE 378
           +  P G    A   P    ++R    +  P     LH   VR  D VQV+ G  KG+ G+
Sbjct: 22  AQVPEGALHGAVVRPPRPHVRR-ALHRAPPQVQRPLHP--VRKDDEVQVVRGSYKGREGK 78

Query: 379 VVRLYKHNSTVIVK 420
           VV++Y+    + V+
Sbjct: 79  VVQVYRRRWVIHVE 92



to top

>AK067220:Os02g0632700 |
          Length = 144

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 21/52 (40%), Positives = 25/52 (48%)
 Frame = -3

Query: 182 GLPQKALVLAAETESAPMAPCSATMPAIVAAGPHSLRPRRESRGAADNEGSS 27
           G P    V A E E  P+ PC  T+ + VAA PH  R RR    A D   +S
Sbjct: 4   GPPAPITVDAREGELNPLPPCLFTIGSAVAAHPHH-RIRRSRIRAGDGRRTS 54



to top

>AK102079:Os05g0383000 |
          Length = 164

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
 Frame = +1

Query: 328 GDTV-----QVIAGREKGKVGEVVRLYKHNSTVIVKDLNLKSKHKKGTEDEPGEIVMIEG 492
           GDT+      +IAG E+ +V E     + + +++   L+    H K  ED    I M+E 
Sbjct: 19  GDTIPWCTRDIIAGCER-EVAEAANEEQKSDSIM--RLSWALVHSKNQEDVNRGIGMLEA 75

Query: 493 PIHSSNMMLYSKEKNVTSRVGH 558
            +  SN  L ++EK     VGH
Sbjct: 76  SLGQSNSPLQTREKLYLLAVGH 97



to top

>AK058345:Os05g0383000 |
          Length = 164

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
 Frame = +1

Query: 328 GDTV-----QVIAGREKGKVGEVVRLYKHNSTVIVKDLNLKSKHKKGTEDEPGEIVMIEG 492
           GDT+      +IAG E+ +V E     + + +++   L+    H K  ED    I M+E 
Sbjct: 19  GDTIPWCTRDIIAGCER-EVAEAANEEQKSDSIM--RLSWALVHSKNQEDVNRGIGMLEA 75

Query: 493 PIHSSNMMLYSKEKNVTSRVGH 558
            +  SN  L ++EK     VGH
Sbjct: 76  SLGQSNSPLQTREKLYLLAVGH 97



to top

>AJ575217:Os11g0129700 |
          Length = 265

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -3

Query: 233 LAMNLTPDGAEEKVAASGLPQKALVLAAETESAPMA-PCS-ATMPAIVAAGPHSLRPRRE 60
           +A   +PD A    +AS  P      ++E  S+PM+ PC     P    +   + RP++E
Sbjct: 1   MAKRSSPDPASSSPSASSSPSSPSSSSSEDSSSPMSMPCKRRARPRTDKSTGKAKRPKKE 60

Query: 59  SRGAAD 42
           S+   D
Sbjct: 61  SKEVVD 66



to top

>Os01g0374200:Os01g0374200 |
          Length = 735

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 553 GHKILEDGTKVRYLKKTGEVIDSVDNWVKVFKEGDSESSS*YGNAAHALNVGCACCCPNA 732
           GH+ L+  ++ R +  +  V+ S  ++   F      +S+  G AAHAL    AC  P+A
Sbjct: 94  GHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHAL----ACKIPSA 149

Query: 733 YS 738
            S
Sbjct: 150 VS 151



to top

>Os05g0576500:Os05g0576500 |
          Length = 387

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = -3

Query: 206 AEEKVAA---SGLPQKALVLAAETESAPMAPCSATMPAIVAAGPHSLRPRRESRGAADNE 36
           ++EKV     SG P   L+  A    + +  CSA +P+  +A  H   P  +     D +
Sbjct: 185 SDEKVTGGSKSGSPHHQLLPLAAVSLSSIVNCSAALPSWSSAAAHPHPPAPDLVACLDGD 244

Query: 35  GS 30
           GS
Sbjct: 245 GS 246



to top

>AK101290:Os03g0304500 |
          Length = 668

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = -3

Query: 230 AMNLTPDGAEEKVAASGLPQKALVLAAETESAPMAPCSATMPAIVAAGPHSLRPRRESRG 51
           A+ +  +  ++++AA  +P+K      +TESAP A  S    A   A P +  P   SR 
Sbjct: 530 ALAVKQEATKQELAAPPMPEKP----RQTESAPCAKRSMASKAKPKAKPAATVPSMMSRK 585

Query: 50  AADNEGSSSA 21
           AA    ++ A
Sbjct: 586 AATTTTTAKA 595



to top

>AK110309: |
          Length = 607

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 173 QKALVLAAETESAPMAPCSATMPAIVAAGPHSLRPRRESRGAADN 39
           Q+A   A E  +  M  C A+  A  AA    L+P R++  A  N
Sbjct: 427 QRANTAAMEAAAQAMQACGASSSAAAAASSKLLQPLRDNHAATPN 471



to top

>AK111960:Os04g0594100 |
          Length = 371

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 161 VLAAETESAPMAPCSATMPAIVAAG 87
           V A+ + SAP +PCS+T P+   AG
Sbjct: 208 VSASASASAPTSPCSSTSPSCARAG 232



to top

>Os03g0803600:Os03g0803600 |
          Length = 706

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = -3

Query: 188 ASGLPQKALVLAAETESAPMAPCSATMPAIVAAGPHSLRPRRESRGAADNEGSSSAFPDR 9
           A+G      +L  E  S  ++  +A+  A  AA  H  RPRR    AA +  SSS+ P R
Sbjct: 14  AAGGAYLLFLLLFELPSVSISVSTASPAAAAAATTH--RPRRRELEAASSSSSSSSSPLR 71



to top

>AK109984: |
          Length = 448

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = -3

Query: 227 MNLTPDGAEEKVAASGLPQKALVLAAETESAPMAPCSATMPAIVAAGPHSLRPRRESRGA 48
           + + PD ++ +   S    +    A+   SAP AP S+T+ +   A          S   
Sbjct: 252 LTVPPDHSDSENGGSSRKIQRAYHASNLVSAPTAPSSSTLASAAIASSEGTAGAAASSDK 311

Query: 47  ADNEGSSSAFPD 12
            D  G+SSA PD
Sbjct: 312 MD-VGTSSAAPD 322



to top

>AK119859: |
          Length = 727

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
 Frame = +1

Query: 271 RKKCKPNSLPMLHKMHVRVGDTVQVIAGREKGKVGEVVR--LYKHNSTVIVKDLNLKSKH 444
           RKK +P+ LP+    H  + + VQ+   R+KG    + +  L ++ ++    DL    K 
Sbjct: 19  RKKLRPSELPLSQAKHSAIDNLVQMF--RKKGHYDSIRKELLAQYEASPAKDDLLSALKD 76

Query: 445 KKGTEDEPGEIVMIEGPIHSSNMM--------LYSKEKNVTSRVGHKILED 573
               E +    ++ +GP  +++++        +Y+   +  + +  K++ED
Sbjct: 77  LVENETDRNPSLLSKGPRMATSIIEGVGERSNIYANIMHTVNTLLDKLIED 127



to top

>AY323480:Os07g0629000 |
          Length = 341

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +1

Query: 115 ALQGAMGALSVSAASTSAFWGNPLAATFSSA----PSGVRFMAKTSPIEMRLKRWERKK 279
           A  G  GA + +AAS  A   +P A++ S A    PS   ++  T  I   L  W RKK
Sbjct: 187 AAAGGGGATTGAAASAGA--DSPAASSTSGASQCSPSSAGYVLTTENISRMLDGWARKK 243



to top

>AK101113:Os03g0689400 |
          Length = 1046

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 454 CLSCAWTSSSGP-SLSQCCCACKAVRLPQLYLFHD 353
           C + A   ++ P +++ CCC  + VR+P L  F D
Sbjct: 37  CQAAAGGEAATPVAMAGCCCCFRGVRVPALSCFRD 71


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,857,648
Number of extensions: 531866
Number of successful extensions: 1993
Number of sequences better than 10.0: 22
Number of HSP's gapped: 1982
Number of HSP's successfully gapped: 22
Length of query: 300
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 200
Effective length of database: 11,395,755
Effective search space: 2279151000
Effective search space used: 2279151000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top