ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070432.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115
2emb|CT832502.1| Oryza sativa (indica cultivar-group) cDNA clone:... 416 e-113
3ref|NM_001064922.1| Oryza sativa (japonica cultivar-group) Os06g... 416 e-113
4dbj|AK060024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
5gb|DQ244207.1| Zea mays clone 3254 mRNA sequence 375 e-100
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 260 8e-66
7dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic D... 260 8e-66
8dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D... 260 8e-66
9gb|AY111059.1| Zea mays CL9367_1 mRNA sequence 226 1e-55
10gb|DQ245656.1| Zea mays clone 18849 mRNA sequence 84 1e-12
11gb|AC189448.1| Brassica rapa subsp. pekinensis clone KBrB071K22,... 84 1e-12
12gb|AC189188.1| Brassica rapa subsp. pekinensis clone KBrB001N22,... 84 1e-12
13gb|M87839.1|TOBRPL24B Nicotiana tabacum (clone: L24-2) chloropla... 56 2e-04
14gb|M87838.1|TOBL24RPA Nicotiana tabacum (clone: L24-1) chloropla... 56 2e-04
15emb|AJ507836.1|ANI507836 Arthrobacter nicotinovorans pAO1 plasmi... 46 0.22
16emb|CR456642.7| Zebrafish DNA sequence from clone DKEY-104P11 in... 44 0.86
17ref|NM_124841.2| Arabidopsis thaliana structural constituent of ... 44 0.86
18ref|NM_180859.1| Arabidopsis thaliana structural constituent of ... 44 0.86
19dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.86
20gb|BT006573.1| Arabidopsis thaliana At5g54600 gene, complete cds 44 0.86
21gb|AY086810.1| Arabidopsis thaliana clone 27973 mRNA, complete s... 44 0.86
22gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 44 0.86
23emb|AL845422.6| Zebrafish DNA sequence from clone DKEY-105A6 in ... 44 0.86
24dbj|AB016879.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.86
25emb|BX833712.1|CNS0A1TQ Arabidopsis thaliana Full-length cDNA Co... 44 0.86
26emb|BX832849.1|CNS0A1UM Arabidopsis thaliana Full-length cDNA Co... 44 0.86
27emb|Y09635.1|ATPLRIBPR A.thaliana mRNA for plastid ribosomal pro... 44 0.86
28gb|BT001990.1| Arabidopsis thaliana 50S ribosomal protein L24, c... 44 0.86
29emb|BX465221.7| Mouse DNA sequence from clone RP23-13E2 on chrom... 44 0.86
30emb|AL806510.12| Mouse DNA sequence from clone RP23-155P8 on chr... 44 0.86
31gb|AC187123.2| Gallus gallus BAC clone TAM31-25K21 from chromoso... 42 3.4
32gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome 42 3.4
33ref|NM_001073501.1| Oryza sativa (japonica cultivar-group) Os12g... 42 3.4
34gb|AC186847.2| Gallus gallus BAC clone CH261-49E19 from chromoso... 42 3.4
35ref|XM_001064858.1| PREDICTED: Rattus norvegicus similar to zinc... 42 3.4
36ref|XM_001064799.1| PREDICTED: Rattus norvegicus similar to zinc... 42 3.4
37ref|XM_216407.4| PREDICTED: Rattus norvegicus zinc finger, CCHC ... 42 3.4
38ref|NM_106488.2| Arabidopsis thaliana unknown protein (AT1G78410... 42 3.4
39gb|AY821791.1| Arabidopsis thaliana tobacco rattle virus-induced... 42 3.4
40gb|AY821790.1| Arabidopsis thaliana tobacco rattle virus-induced... 42 3.4
41gb|BT011927.1| Arabidopsis thaliana At1g78410 mRNA sequence 42 3.4
42gb|AY102135.1| Arabidopsis thaliana At1g78410/F3F9_27 mRNA, comp... 42 3.4
43dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
44dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
45gb|AY070754.1| Arabidopsis thaliana At1g78410/F3F9_27 mRNA, comp... 42 3.4
46emb|Y08067.1|CARNAPOLY C.album mRNA for mitochondrial single-sub... 42 3.4
47gb|AY085552.1| Arabidopsis thaliana clone 157 mRNA, complete seq... 42 3.4
48gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 3.4
49gb|AF548364.1| Metapenaeus ensis vitellogenin mRNA, complete cds 42 3.4
50gb|AF548363.1| Metapenaeus ensis vitellogenin gene, complete cds 42 3.4
51dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
52dbj|AK108164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
53dbj|AK101059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
54emb|BX816295.1|CNS0ABXS Arabidopsis thaliana Full-length cDNA Co... 42 3.4
55emb|BX818135.1|CNS0ABAB Arabidopsis thaliana Full-length cDNA Co... 42 3.4
56gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana... 42 3.4
57dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 3.4
58dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone... 42 3.4
59emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123... 42 3.4 
>dbj|AK070432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054E10, full
           insert sequence
          Length = 858
 Score =  424 bits (214), Expect = e-115
 Identities = 459/540 (85%), Gaps = 3/540 (0%)
 Strand = Plus / Plus

                                                                       
Query: 154 gcgagcaccagcgccttctggggcaacccgctcgccgccaccttctcctccgcgccgtct 213
           ||||||||||||  |||||||||| |||||||| ||   |||||| || |||||||| ||
Sbjct: 145 gcgagcaccagcagcttctggggccacccgctctcc---accttcgccgccgcgccggct 201

                                                                       
Query: 214 ggggtcagattcatggccaagacaagcccaattgaaatgcggcttaagcgatgggaacgg 273
           ||||| | ||| |||  ||||||| |||||||| ||||| ||||||||||||||||  ||
Sbjct: 202 ggggttaaatttatgatcaagacatgcccaattcaaatgaggcttaagcgatgggagagg 261

                                                                       
Query: 274 aagaagtgcaagccaaacagtcttcctatgctgcacaagatgcatgttagggtcggcgac 333
           |||||||| || ||||||||||||||| | ||||||||||||||||||||| | ||||| 
Sbjct: 262 aagaagtgtaaaccaaacagtcttcctgtcctgcacaagatgcatgttaggattggcgat 321

                                                                       
Query: 334 acagtgcaagtcattgcaggtcgtgaaaaaggtaaagttggggaagtcgtacggctttac 393
           ||||| |||||||||||||| ||||| |||||||||||||| |||||    |||||||  
Sbjct: 322 acagtacaagtcattgcaggccgtgagaaaggtaaagttggagaagttacgcggcttttt 381

                                                                       
Query: 394 aagcacaacagcactgtgatagtgaaggacctgaacttgaagtccaagcacaagaaaggc 453
           ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| 
Sbjct: 382 aagcacaacagcactgtaatagtgaaggacttgaacttgaagtccaagcacaagaaagga 441

                                                                       
Query: 454 acagaggatgaaccgggagaaattgtcatgattgaaggccccatccatagctcgaacatg 513
           ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||  ||
Sbjct: 442 acagaagatgaaccgggtgaaatcgtcatgattgaaggccccatccacagctcaaatgtg 501

                                                                       
Query: 514 atgctctactcaaaggagaagaacgtgacgagtagggtcgggcacaaaatcctcgaagac 573
           ||||||||||||||||| ||||| ||| |||||||||| || |||||| |||| || || 
Sbjct: 502 atgctctactcaaaggaaaagaatgtggcgagtagggttggacacaaattccttgaggat 561

                                                                       
Query: 574 ggcaccaaggtccgctacctgaagaagaccggcgaagtaatcgacagcgttgataactgg 633
           || || ||||| || ||||||   ||||| || ||| |||| ||||| | ||| || |||
Sbjct: 562 ggaacgaaggttcggtacctggtcaagactggtgaaataattgacagtgctgagaattgg 621

                                                                       
Query: 634 gtgaaggtgttcaaggaaggagattcagagtcatcatcgtagtatggaaatgctgcacat 693
           || ||||||||||||||||||  ||| |||| ||||| |||| |||| | | ||||||||
Sbjct: 622 gtcaaggtgttcaaggaaggaagttcggagtgatcatggtagcatgggagtcctgcacat 681
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>emb|CT832502.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA018F03, full
           insert sequence
          Length = 859

 Score =  416 bits (210), Expect = e-113
 Identities = 458/540 (84%), Gaps = 3/540 (0%)
 Strand = Plus / Plus

                                                                       
Query: 154 gcgagcaccagcgccttctggggcaacccgctcgccgccaccttctcctccgcgccgtct 213
           ||||||||||||  |||||||||| |||||||| ||   |||||| || |||||||| ||
Sbjct: 146 gcgagcaccagcagcttctggggccacccgctctcc---accttcgccgccgcgccggct 202

                                                                       
Query: 214 ggggtcagattcatggccaagacaagcccaattgaaatgcggcttaagcgatgggaacgg 273
           ||||| | ||| |||  ||||||| |||||||| ||||| ||||||||||||||||  ||
Sbjct: 203 ggggttaaatttatgatcaagacatgcccaattcaaatgaggcttaagcgatgggagagg 262

                                                                       
Query: 274 aagaagtgcaagccaaacagtcttcctatgctgcacaagatgcatgttagggtcggcgac 333
           |||||||| || ||||||||||||||| | ||||||||||||||||||||| | ||||| 
Sbjct: 263 aagaagtgtaaaccaaacagtcttcctgtcctgcacaagatgcatgttaggattggcgat 322

                                                                       
Query: 334 acagtgcaagtcattgcaggtcgtgaaaaaggtaaagttggggaagtcgtacggctttac 393
           ||||| |||||||||||||| ||||| ||||||||||||||||||||    |||||||  
Sbjct: 323 acagtacaagtcattgcaggccgtgagaaaggtaaagttggggaagttacgcggcttttt 382

                                                                       
Query: 394 aagcacaacagcactgtgatagtgaaggacctgaacttgaagtccaagcacaagaaaggc 453
           ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| 
Sbjct: 383 aagcacaacagcactgtaatagtgaaggacttgaacttgaagtccaagcacaagaaagga 442

                                                                       
Query: 454 acagaggatgaaccgggagaaattgtcatgattgaaggccccatccatagctcgaacatg 513
           ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||| ||  ||
Sbjct: 443 acagaagatgaaccgggtgaaatcgtcatgattgaaggccccattcacagctcaaatgtg 502

                                                                       
Query: 514 atgctctactcaaaggagaagaacgtgacgagtagggtcgggcacaaaatcctcgaagac 573
           ||||||||||||||||| || || ||| |||||||||| || |||||| |||| || || 
Sbjct: 503 atgctctactcaaaggaaaacaatgtggcgagtagggttggacacaaattccttgaggat 562

                                                                       
Query: 574 ggcaccaaggtccgctacctgaagaagaccggcgaagtaatcgacagcgttgataactgg 633
           || || ||||| || ||||||   ||||| || ||| |||| ||||| | ||| || |||
Sbjct: 563 ggaacgaaggttcggtacctggtcaagactggtgaaataattgacagtgctgagaattgg 622

                                                                       
Query: 634 gtgaaggtgttcaaggaaggagattcagagtcatcatcgtagtatggaaatgctgcacat 693
           || ||||||||||||||||||  ||| |||| ||||| |||| |||| | | ||||||||
Sbjct: 623 gtcaaggtgttcaaggaaggaagttcggagtgatcatggtagcatgggagtcctgcacat 682
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>ref|NM_001064922.1| Oryza sativa (japonica cultivar-group) Os06g0683200 (Os06g0683200)
           mRNA, complete cds
          Length = 861

 Score =  416 bits (210), Expect = e-113
 Identities = 458/540 (84%), Gaps = 3/540 (0%)
 Strand = Plus / Plus

                                                                       
Query: 154 gcgagcaccagcgccttctggggcaacccgctcgccgccaccttctcctccgcgccgtct 213
           ||||||||||||  |||||||||| |||||||| ||   |||||| || |||||||| ||
Sbjct: 130 gcgagcaccagcagcttctggggccacccgctctcc---accttcgccgccgcgccggct 186

                                                                       
Query: 214 ggggtcagattcatggccaagacaagcccaattgaaatgcggcttaagcgatgggaacgg 273
           ||||| | ||| |||  ||||||| |||||||| ||||| ||||||||||||||||  ||
Sbjct: 187 ggggttaaatttatgatcaagacatgcccaattcaaatgaggcttaagcgatgggagagg 246

                                                                       
Query: 274 aagaagtgcaagccaaacagtcttcctatgctgcacaagatgcatgttagggtcggcgac 333
           |||||||| || ||||||||||||||| | ||||||||||||||||||||| | ||||| 
Sbjct: 247 aagaagtgtaaaccaaacagtcttcctgtcctgcacaagatgcatgttaggattggcgat 306

                                                                       
Query: 334 acagtgcaagtcattgcaggtcgtgaaaaaggtaaagttggggaagtcgtacggctttac 393
           ||||| |||||||||||||| ||||| |||||||||||||| |||||    |||||||  
Sbjct: 307 acagtacaagtcattgcaggccgtgagaaaggtaaagttggagaagttacgcggcttttt 366

                                                                       
Query: 394 aagcacaacagcactgtgatagtgaaggacctgaacttgaagtccaagcacaagaaaggc 453
           ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| 
Sbjct: 367 aagcacaacagcactgtaatagtgaaggacttgaacttgaagtccaagcacaagaaagga 426

                                                                       
Query: 454 acagaggatgaaccgggagaaattgtcatgattgaaggccccatccatagctcgaacatg 513
           ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||| ||  ||
Sbjct: 427 acagaagatgaaccgggtgaaatcgtcatgattgaaggccccattcacagctcaaatgtg 486

                                                                       
Query: 514 atgctctactcaaaggagaagaacgtgacgagtagggtcgggcacaaaatcctcgaagac 573
           ||||||||||||||||| ||||| ||| |||||||||| || |||||| |||| || || 
Sbjct: 487 atgctctactcaaaggaaaagaatgtggcgagtagggttggacacaaattccttgaggat 546

                                                                       
Query: 574 ggcaccaaggtccgctacctgaagaagaccggcgaagtaatcgacagcgttgataactgg 633
           || || ||||| || ||||||   ||||| || ||| |||| ||||| | ||| || |||
Sbjct: 547 ggaacgaaggttcggtacctggtcaagactggtgaaataattgacagtgctgagaattgg 606

                                                                       
Query: 634 gtgaaggtgttcaaggaaggagattcagagtcatcatcgtagtatggaaatgctgcacat 693
           || ||||||||||||||||||  ||| |||| ||||| |||| |||| | | ||||||||
Sbjct: 607 gtcaaggtgttcaaggaaggaagttcggagtgatcatggtagcatgggagtcctgcacat 666
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>dbj|AK060024.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-A09, full
           insert sequence
          Length = 861

 Score =  416 bits (210), Expect = e-113
 Identities = 458/540 (84%), Gaps = 3/540 (0%)
 Strand = Plus / Plus

                                                                       
Query: 154 gcgagcaccagcgccttctggggcaacccgctcgccgccaccttctcctccgcgccgtct 213
           ||||||||||||  |||||||||| |||||||| ||   |||||| || |||||||| ||
Sbjct: 130 gcgagcaccagcagcttctggggccacccgctctcc---accttcgccgccgcgccggct 186

                                                                       
Query: 214 ggggtcagattcatggccaagacaagcccaattgaaatgcggcttaagcgatgggaacgg 273
           ||||| | ||| |||  ||||||| |||||||| ||||| ||||||||||||||||  ||
Sbjct: 187 ggggttaaatttatgatcaagacatgcccaattcaaatgaggcttaagcgatgggagagg 246

                                                                       
Query: 274 aagaagtgcaagccaaacagtcttcctatgctgcacaagatgcatgttagggtcggcgac 333
           |||||||| || ||||||||||||||| | ||||||||||||||||||||| | ||||| 
Sbjct: 247 aagaagtgtaaaccaaacagtcttcctgtcctgcacaagatgcatgttaggattggcgat 306

                                                                       
Query: 334 acagtgcaagtcattgcaggtcgtgaaaaaggtaaagttggggaagtcgtacggctttac 393
           ||||| |||||||||||||| ||||| |||||||||||||| |||||    |||||||  
Sbjct: 307 acagtacaagtcattgcaggccgtgagaaaggtaaagttggagaagttacgcggcttttt 366

                                                                       
Query: 394 aagcacaacagcactgtgatagtgaaggacctgaacttgaagtccaagcacaagaaaggc 453
           ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| 
Sbjct: 367 aagcacaacagcactgtaatagtgaaggacttgaacttgaagtccaagcacaagaaagga 426

                                                                       
Query: 454 acagaggatgaaccgggagaaattgtcatgattgaaggccccatccatagctcgaacatg 513
           ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||| ||  ||
Sbjct: 427 acagaagatgaaccgggtgaaatcgtcatgattgaaggccccattcacagctcaaatgtg 486

                                                                       
Query: 514 atgctctactcaaaggagaagaacgtgacgagtagggtcgggcacaaaatcctcgaagac 573
           ||||||||||||||||| ||||| ||| |||||||||| || |||||| |||| || || 
Sbjct: 487 atgctctactcaaaggaaaagaatgtggcgagtagggttggacacaaattccttgaggat 546

                                                                       
Query: 574 ggcaccaaggtccgctacctgaagaagaccggcgaagtaatcgacagcgttgataactgg 633
           || || ||||| || ||||||   ||||| || ||| |||| ||||| | ||| || |||
Sbjct: 547 ggaacgaaggttcggtacctggtcaagactggtgaaataattgacagtgctgagaattgg 606

                                                                       
Query: 634 gtgaaggtgttcaaggaaggagattcagagtcatcatcgtagtatggaaatgctgcacat 693
           || ||||||||||||||||||  ||| |||| ||||| |||| |||| | | ||||||||
Sbjct: 607 gtcaaggtgttcaaggaaggaagttcggagtgatcatggtagcatgggagtcctgcacat 666
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>gb|DQ244207.1| Zea mays clone 3254 mRNA sequence
          Length = 797

 Score =  375 bits (189), Expect = e-100
 Identities = 431/511 (84%), Gaps = 3/511 (0%)
 Strand = Plus / Plus

                                                                       
Query: 154 gcgagcaccagcgccttctggggcaacccgctcgccgccaccttctcctccgcgccgtct 213
           ||||||| ||||  |||||||||||||| |||||||   |||| |||| |  ||| | ||
Sbjct: 118 gcgagcagcagcagcttctggggcaaccggctcgcc---acctactccgcgccgcagcct 174

                                                                       
Query: 214 ggggtcagattcatggccaagacaagcccaattgaaatgcggcttaagcgatgggaacgg 273
           ||||| || || |||| ||||| | |||||||||||||| | |||||| ||||||| || 
Sbjct: 175 ggggtaaggtttatggtcaagatatgcccaattgaaatgagacttaagagatgggagcga 234

                                                                       
Query: 274 aagaagtgcaagccaaacagtcttcctatgctgcacaagatgcatgttagggtcggcgac 333
           |||||||| || ||||||||||||||| ||||||||||||||||||||||| |||| |||
Sbjct: 235 aagaagtgtaaaccaaacagtcttcctgtgctgcacaagatgcatgttaggatcggggac 294

                                                                       
Query: 334 acagtgcaagtcattgcaggtcgtgaaaaaggtaaagttggggaagtcgtacggctttac 393
           || || || || |||||||| ||||| ||||| || ||||| ||||||  ||| |||| |
Sbjct: 295 acggtacaggttattgcaggccgtgagaaaggaaaggttggagaagtcacacgccttttc 354

                                                                       
Query: 394 aagcacaacagcactgtgatagtgaaggacctgaacttgaagtccaagcacaagaaaggc 453
           |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 355 aagcacaacagcacggtgatcgtgaaggacctgaacttgaagtcgaagcacaagaaaggc 414

                                                                       
Query: 454 acagaggatgaaccgggagaaattgtcatgattgaaggccccatccatagctcgaacatg 513
           ||||| |||||||| || ||||| |||||||||||||||||||| |||||||| ||  ||
Sbjct: 415 acagacgatgaacccggtgaaatcgtcatgattgaaggccccattcatagctcaaatgtg 474

                                                                       
Query: 514 atgctctactcaaaggagaagaacgtgacgagtagggtcgggcacaaaatcctcgaagac 573
           ||||||||||| ||||||||||  |||   || ||||| || |||||| |||| || |||
Sbjct: 475 atgctctactctaaggagaagagtgtggtaagcagggttggccacaaattcctggaggac 534

                                                                       
Query: 574 ggcaccaaggtccgctacctgaagaagaccggcgaagtaatcgacagcgttgataactgg 633
           || ||||||||||| ||||||   |||||||| |||||||||||||| || || || |||
Sbjct: 535 gggaccaaggtccgatacctggtcaagaccggtgaagtaatcgacagtgtcgagaagtgg 594

                                          
Query: 634 gtgaaggtgttcaaggaaggagattcagagt 664
           || ||||| || ||||||||| |||| ||||
Sbjct: 595 gtaaaggtttttaaggaaggaaattcggagt 625



 Score = 46.1 bits (23), Expect = 0.22
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 99  gatggccggcatggtggcgctgcagggcgccatgggggcgctctccgtctc 149
           |||||| || |||| | |||||||||||||||||| | |||||||| ||||
Sbjct: 48  gatggctgggatggcgtcgctgcagggcgccatggcgtcgctctccatctc 98
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  260 bits (131), Expect = 8e-66
 Identities = 209/235 (88%)
 Strand = Plus / Minus

                                                                            
Query: 249      aatgcggcttaagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgca 308
                ||||| |||||||||||||||  |||||||||| || ||||||||||||||| | |||||
Sbjct: 28089707 aatgcagcttaagcgatgggagaggaagaagtgtaaaccaaacagtcttcctgtcctgca 28089648

                                                                            
Query: 309      caagatgcatgttagggtcggcgacacagtgcaagtcattgcaggtcgtgaaaaaggtaa 368
                |||||||||||||||| | ||||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 28089647 caagatgcatgttaggattggcgatacagtacaagtcattgcaggccgtgagaaaggtaa 28089588

                                                                            
Query: 369      agttggggaagtcgtacggctttacaagcacaacagcactgtgatagtgaaggacctgaa 428
                |||||| |||||    |||||||  ||||||||||||||||| |||||||||||| ||||
Sbjct: 28089587 agttggagaagttacgcggctttttaagcacaacagcactgtaatagtgaaggacttgaa 28089528

                                                                       
Query: 429      cttgaagtccaagcacaagaaaggcacagaggatgaaccgggagaaattgtcatg 483
                |||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||
Sbjct: 28089527 cttgaagtccaagcacaagaaaggaacagaagatgaaccgggtgaaatcgtcatg 28089473



 Score =  109 bits (55), Expect = 2e-20
 Identities = 172/211 (81%)
 Strand = Plus / Minus

                                                                            
Query: 483      gattgaaggccccatccatagctcgaacatgatgctctactcaaaggagaagaacgtgac 542
                ||||||||||||||| || ||||| ||  ||||||||||||||||||| ||||| ||| |
Sbjct: 28089360 gattgaaggccccattcacagctcaaatgtgatgctctactcaaaggaaaagaatgtggc 28089301

                                                                            
Query: 543      gagtagggtcgggcacaaaatcctcgaagacggcaccaaggtccgctacctgaagaagac 602
                ||||||||| || |||||| |||| || || || || ||||| || ||||||   |||||
Sbjct: 28089300 gagtagggttggacacaaattccttgaggatggaacgaaggttcggtacctggtcaagac 28089241

                                                                            
Query: 603      cggcgaagtaatcgacagcgttgataactgggtgaaggtgttcaaggaaggagattcaga 662
                 || ||| |||| ||||| | ||| || ||||| ||||||||||||||||||  ||| ||
Sbjct: 28089240 tggtgaaataattgacagtgctgagaattgggtcaaggtgttcaaggaaggaagttcgga 28089181

                                               
Query: 663      gtcatcatcgtagtatggaaatgctgcacat 693
                || ||||| |||| |||| | | ||||||||
Sbjct: 28089180 gtgatcatggtagcatgggagtcctgcacat 28089150



 Score = 46.1 bits (23), Expect = 0.22
 Identities = 55/65 (84%), Gaps = 3/65 (4%)
 Strand = Plus / Minus

                                                                            
Query: 154      gcgagcaccagcgccttctggggcaacccgctcgccgccaccttctcctccgcgccgtct 213
                ||||||||||||  |||||||||| |||||||   | |||||||| || |||||||| ||
Sbjct: 28090983 gcgagcaccagcagcttctggggccacccgct---ctccaccttcgccgccgcgccggct 28090927

                     
Query: 214      ggggt 218
                |||||
Sbjct: 28090926 ggggt 28090922
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>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0547F09
          Length = 140615

 Score =  260 bits (131), Expect = 8e-66
 Identities = 209/235 (88%)
 Strand = Plus / Minus

                                                                          
Query: 249    aatgcggcttaagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgca 308
              ||||| |||||||||||||||  |||||||||| || ||||||||||||||| | |||||
Sbjct: 134526 aatgcagcttaagcgatgggagaggaagaagtgtaaaccaaacagtcttcctgtcctgca 134467

                                                                          
Query: 309    caagatgcatgttagggtcggcgacacagtgcaagtcattgcaggtcgtgaaaaaggtaa 368
              |||||||||||||||| | ||||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 134466 caagatgcatgttaggattggcgatacagtacaagtcattgcaggccgtgagaaaggtaa 134407

                                                                          
Query: 369    agttggggaagtcgtacggctttacaagcacaacagcactgtgatagtgaaggacctgaa 428
              |||||| |||||    |||||||  ||||||||||||||||| |||||||||||| ||||
Sbjct: 134406 agttggagaagttacgcggctttttaagcacaacagcactgtaatagtgaaggacttgaa 134347

                                                                     
Query: 429    cttgaagtccaagcacaagaaaggcacagaggatgaaccgggagaaattgtcatg 483
              |||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||
Sbjct: 134346 cttgaagtccaagcacaagaaaggaacagaagatgaaccgggtgaaatcgtcatg 134292



 Score =  109 bits (55), Expect = 2e-20
 Identities = 172/211 (81%)
 Strand = Plus / Minus

                                                                          
Query: 483    gattgaaggccccatccatagctcgaacatgatgctctactcaaaggagaagaacgtgac 542
              ||||||||||||||| || ||||| ||  ||||||||||||||||||| ||||| ||| |
Sbjct: 134179 gattgaaggccccattcacagctcaaatgtgatgctctactcaaaggaaaagaatgtggc 134120

                                                                          
Query: 543    gagtagggtcgggcacaaaatcctcgaagacggcaccaaggtccgctacctgaagaagac 602
              ||||||||| || |||||| |||| || || || || ||||| || ||||||   |||||
Sbjct: 134119 gagtagggttggacacaaattccttgaggatggaacgaaggttcggtacctggtcaagac 134060

                                                                          
Query: 603    cggcgaagtaatcgacagcgttgataactgggtgaaggtgttcaaggaaggagattcaga 662
               || ||| |||| ||||| | ||| || ||||| ||||||||||||||||||  ||| ||
Sbjct: 134059 tggtgaaataattgacagtgctgagaattgggtcaaggtgttcaaggaaggaagttcgga 134000

                                             
Query: 663    gtcatcatcgtagtatggaaatgctgcacat 693
              || ||||| |||| |||| | | ||||||||
Sbjct: 133999 gtgatcatggtagcatgggagtcctgcacat 133969



 Score = 46.1 bits (23), Expect = 0.22
 Identities = 55/65 (84%), Gaps = 3/65 (4%)
 Strand = Plus / Minus

                                                                          
Query: 154    gcgagcaccagcgccttctggggcaacccgctcgccgccaccttctcctccgcgccgtct 213
              ||||||||||||  |||||||||| |||||||   | |||||||| || |||||||| ||
Sbjct: 135802 gcgagcaccagcagcttctggggccacccgct---ctccaccttcgccgccgcgccggct 135746

                   
Query: 214    ggggt 218
              |||||
Sbjct: 135745 ggggt 135741
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>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0009H10
          Length = 175754

 Score =  260 bits (131), Expect = 8e-66
 Identities = 209/235 (88%)
 Strand = Plus / Minus

                                                                         
Query: 249   aatgcggcttaagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgca 308
             ||||| |||||||||||||||  |||||||||| || ||||||||||||||| | |||||
Sbjct: 20613 aatgcagcttaagcgatgggagaggaagaagtgtaaaccaaacagtcttcctgtcctgca 20554

                                                                         
Query: 309   caagatgcatgttagggtcggcgacacagtgcaagtcattgcaggtcgtgaaaaaggtaa 368
             |||||||||||||||| | ||||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 20553 caagatgcatgttaggattggcgatacagtacaagtcattgcaggccgtgagaaaggtaa 20494

                                                                         
Query: 369   agttggggaagtcgtacggctttacaagcacaacagcactgtgatagtgaaggacctgaa 428
             |||||| |||||    |||||||  ||||||||||||||||| |||||||||||| ||||
Sbjct: 20493 agttggagaagttacgcggctttttaagcacaacagcactgtaatagtgaaggacttgaa 20434

                                                                    
Query: 429   cttgaagtccaagcacaagaaaggcacagaggatgaaccgggagaaattgtcatg 483
             |||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||
Sbjct: 20433 cttgaagtccaagcacaagaaaggaacagaagatgaaccgggtgaaatcgtcatg 20379



 Score =  109 bits (55), Expect = 2e-20
 Identities = 172/211 (81%)
 Strand = Plus / Minus

                                                                         
Query: 483   gattgaaggccccatccatagctcgaacatgatgctctactcaaaggagaagaacgtgac 542
             ||||||||||||||| || ||||| ||  ||||||||||||||||||| ||||| ||| |
Sbjct: 20266 gattgaaggccccattcacagctcaaatgtgatgctctactcaaaggaaaagaatgtggc 20207

                                                                         
Query: 543   gagtagggtcgggcacaaaatcctcgaagacggcaccaaggtccgctacctgaagaagac 602
             ||||||||| || |||||| |||| || || || || ||||| || ||||||   |||||
Sbjct: 20206 gagtagggttggacacaaattccttgaggatggaacgaaggttcggtacctggtcaagac 20147

                                                                         
Query: 603   cggcgaagtaatcgacagcgttgataactgggtgaaggtgttcaaggaaggagattcaga 662
              || ||| |||| ||||| | ||| || ||||| ||||||||||||||||||  ||| ||
Sbjct: 20146 tggtgaaataattgacagtgctgagaattgggtcaaggtgttcaaggaaggaagttcgga 20087

                                            
Query: 663   gtcatcatcgtagtatggaaatgctgcacat 693
             || ||||| |||| |||| | | ||||||||
Sbjct: 20086 gtgatcatggtagcatgggagtcctgcacat 20056



 Score = 46.1 bits (23), Expect = 0.22
 Identities = 55/65 (84%), Gaps = 3/65 (4%)
 Strand = Plus / Minus

                                                                         
Query: 154   gcgagcaccagcgccttctggggcaacccgctcgccgccaccttctcctccgcgccgtct 213
             ||||||||||||  |||||||||| |||||||   | |||||||| || |||||||| ||
Sbjct: 21889 gcgagcaccagcagcttctggggccacccgct---ctccaccttcgccgccgcgccggct 21833

                  
Query: 214   ggggt 218
             |||||
Sbjct: 21832 ggggt 21828
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>gb|AY111059.1| Zea mays CL9367_1 mRNA sequence
          Length = 666

 Score =  226 bits (114), Expect = 1e-55
 Identities = 235/277 (84%)
 Strand = Plus / Minus

                                                                       
Query: 388 ctttacaagcacaacagcactgtgatagtgaaggacctgaacttgaagtccaagcacaag 447
           |||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 439 cttttcaagcacaacagcacggtgatcgtgaaggacctgaacttgaagtcgaagcacaag 380

                                                                       
Query: 448 aaaggcacagaggatgaaccgggagaaattgtcatgattgaaggccccatccatagctcg 507
           ||||||||||| |||||||| || ||||| |||||||||||||||||||| |||||||| 
Sbjct: 379 aaaggcacagacgatgaacccggtgaaatcgtcatgattgaaggccccattcatagctca 320

                                                                       
Query: 508 aacatgatgctctactcaaaggagaagaacgtgacgagtagggtcgggcacaaaatcctc 567
           ||  ||||||||||||| ||||||||||  |||   || ||||| || | |||| |||| 
Sbjct: 319 aatgtgatgctctactctaaggagaagagtgtggtaagcagggttggccccaaattcctg 260

                                                                       
Query: 568 gaagacggcaccaaggtccgctacctgaagaagaccggcgaagtaatcgacagcgttgat 627
           || ||||| ||||||||||| ||||||   |||||||| |||||||||||||| ||||| 
Sbjct: 259 gaggacgggaccaaggtccgatacctggtcaagaccggtgaagtaatcgacagtgttgag 200

                                                
Query: 628 aactgggtgaaggtgttcaaggaaggagattcagagt 664
           || ||||| ||||     ||||||||| |||| ||||
Sbjct: 199 aagtgggtaaaggnnnnnaaggaaggaaattcggagt 163



 Score =  127 bits (64), Expect = 7e-26
 Identities = 156/186 (83%), Gaps = 3/186 (1%)
 Strand = Plus / Minus

                                                                       
Query: 168 cttctggggcaacccgctcgccgccaccttctcctccgcgccgtctggggtcagattcat 227
           |||||||||||||| |||||||   |||| |||| |  ||| | ||||||| || || ||
Sbjct: 656 cttctggggcaaccggctcgcc---acctactccgcgccgcagcctggggtaaggtttat 600

                                                                       
Query: 228 ggccaagacaagcccaattgaaatgcggcttaagcgatgggaacggaagaagtgcaagcc 287
           || ||||| | |||||||||||||| | |||||| ||||||| || |||||||| || ||
Sbjct: 599 ggtcaagatatgcccaattgaaatgagacttaagagatgggagcgaaagaagtgtaaacc 540

                                                                       
Query: 288 aaacagtcttcctatgctgcacaagatgcatgttagggtcggcgacacagtgcaagtcat 347
           ||||||||||||| ||||||||||||||||||||||| |||| ||||| || || || ||
Sbjct: 539 aaacagtcttcctgtgctgcacaagatgcatgttaggatcggggacacggtacaggttat 480

                 
Query: 348 tgcagg 353
           ||||||
Sbjct: 479 tgcagg 474
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>gb|DQ245656.1| Zea mays clone 18849 mRNA sequence
          Length = 801

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                       
Query: 255 gcttaagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagat 314
           ||||||||| |||||||||||||| ||||| |||||||||||||| || |||||||| ||
Sbjct: 202 gcttaagcgttgggaacggaagaaatgcaaaccaaacagtcttccaattctgcacaaaat 261

                 
Query: 315 gcatgt 320
           ||||||
Sbjct: 262 gcatgt 267
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>gb|AC189448.1| Brassica rapa subsp. pekinensis clone KBrB071K22, complete sequence
          Length = 132834

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                        
Query: 255  gcttaagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagat 314
            ||||||||| |||||||||||||| ||||| |||||||||||||| || |||||||| ||
Sbjct: 3576 gcttaagcgttgggaacggaagaaatgcaaaccaaacagtcttccaattctgcacaaaat 3517

                  
Query: 315  gcatgt 320
            ||||||
Sbjct: 3516 gcatgt 3511
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>gb|AC189188.1| Brassica rapa subsp. pekinensis clone KBrB001N22, complete sequence
          Length = 109768

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                         
Query: 255   gcttaagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagat 314
             ||||||||| |||||||||||||| ||||| |||||||||||||| || |||||||| ||
Sbjct: 50110 gcttaagcgttgggaacggaagaaatgcaaaccaaacagtcttccaattctgcacaaaat 50169

                   
Query: 315   gcatgt 320
             ||||||
Sbjct: 50170 gcatgt 50175
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>gb|M87839.1|TOBRPL24B Nicotiana tabacum (clone: L24-2) chloroplast ribosomal protein L24
           mRNA, complete cds
          Length = 736

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 255 gcttaagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagat 314
           ||||||||||||||| |||||  |||| ||||||||||| |||||  | || ||||| ||
Sbjct: 140 gcttaagcgatgggagcggaaagagtgtaagccaaacagccttccagtactacacaaaat 199

                   
Query: 315 gcatgtta 322
           ||||||||
Sbjct: 200 gcatgtta 207
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>gb|M87838.1|TOBL24RPA Nicotiana tabacum (clone: L24-1) chloroplast ribosomal protein L24
           mRNA, complete cds
          Length = 848

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 255 gcttaagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagat 314
           ||||||||||||||| |||||  |||| ||||||||||| |||||  | || ||||| ||
Sbjct: 140 gcttaagcgatgggagcggaaagagtgtaagccaaacagccttccagtactacacaaaat 199

                   
Query: 315 gcatgtta 322
           ||||||||
Sbjct: 200 gcatgtta 207
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>emb|AJ507836.1|ANI507836 Arthrobacter nicotinovorans pAO1 plasmid sequence
          Length = 165137

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 564   cctcgaagacggcaccaaggtcc 586
             |||||||||||||||||||||||
Sbjct: 37462 cctcgaagacggcaccaaggtcc 37484
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>emb|CR456642.7| Zebrafish DNA sequence from clone DKEY-104P11 in linkage group 23,
             complete sequence
          Length = 111773

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 47    ctgcccccctgctttctctccg 68
             ||||||||||||||||||||||
Sbjct: 32254 ctgcccccctgctttctctccg 32233
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>ref|NM_124841.2| Arabidopsis thaliana structural constituent of ribosome (AT5G54600)
           mRNA, complete cds
          Length = 772

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 aagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagatgcat 318
           ||||| |||||||| ||  | ||||| |||||||||||||| || || ||||| ||||||
Sbjct: 225 aagcgttgggaacgaaaagaatgcaaaccaaacagtcttccgattctccacaaaatgcat 284

             
Query: 319 gt 320
           ||
Sbjct: 285 gt 286
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>ref|NM_180859.1| Arabidopsis thaliana structural constituent of ribosome (AT5G54600)
           mRNA, complete cds
          Length = 829

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 aagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagatgcat 318
           ||||| |||||||| ||  | ||||| |||||||||||||| || || ||||| ||||||
Sbjct: 225 aagcgttgggaacgaaaagaatgcaaaccaaacagtcttccgattctccacaaaatgcat 284

             
Query: 319 gt 320
           ||
Sbjct: 285 gt 286
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 90     ggcggcgacgatggccggcatg 111
              ||||||||||||||||||||||
Sbjct: 507260 ggcggcgacgatggccggcatg 507281
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>gb|BT006573.1| Arabidopsis thaliana At5g54600 gene, complete cds
          Length = 597

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 aagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagatgcat 318
           ||||| |||||||| ||  | ||||| |||||||||||||| || || ||||| ||||||
Sbjct: 157 aagcgttgggaacgaaaagaatgcaaaccaaacagtcttccgattctccacaaaatgcat 216

             
Query: 319 gt 320
           ||
Sbjct: 217 gt 218
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>gb|AY086810.1| Arabidopsis thaliana clone 27973 mRNA, complete sequence
          Length = 767

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 aagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagatgcat 318
           ||||| |||||||| ||  | ||||| |||||||||||||| || || ||||| ||||||
Sbjct: 225 aagcgttgggaacgaaaagaatgcaaaccaaacagtcttccgattctccacaaaatgcat 284

             
Query: 319 gt 320
           ||
Sbjct: 285 gt 286
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 555     gcacaaaatcctcgaagacggcacca 580
               |||||| |||||||||||||||||||
Sbjct: 2932383 gcacaagatcctcgaagacggcacca 2932408
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>emb|AL845422.6| Zebrafish DNA sequence from clone DKEY-105A6 in linkage group 23
             Contains a novel gene and a CpG island, complete sequence
          Length = 221136

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 47    ctgcccccctgctttctctccg 68
             ||||||||||||||||||||||
Sbjct: 51830 ctgcccccctgctttctctccg 51809
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>dbj|AB016879.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRB17
          Length = 75744

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 259   aagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagatgcat 318
             ||||| |||||||| ||  | ||||| |||||||||||||| || || ||||| ||||||
Sbjct: 49800 aagcgttgggaacgaaaagaatgcaaaccaaacagtcttccgattctccacaaaatgcat 49859

               
Query: 319   gt 320
             ||
Sbjct: 49860 gt 49861
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>emb|BX833712.1|CNS0A1TQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL72ZC03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 748

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 aagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagatgcat 318
           ||||| |||||||| ||  | ||||| |||||||||||||| || || ||||| ||||||
Sbjct: 200 aagcgttgggaacgaaaagaatgcaaaccaaacagtcttccgattctccacaaaatgcat 259

             
Query: 319 gt 320
           ||
Sbjct: 260 gt 261
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>emb|BX832849.1|CNS0A1UM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL17ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 554

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 aagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagatgcat 318
           ||||| |||||||| ||  | ||||| |||||||||||||| || || ||||| ||||||
Sbjct: 6   aagcgttgggaacgaaaagaatgcaaaccaaacagtcttccgattctccacaaaatgcat 65

             
Query: 319 gt 320
           ||
Sbjct: 66  gt 67
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>emb|Y09635.1|ATPLRIBPR A.thaliana mRNA for plastid ribosomal protein
          Length = 740

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 aagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagatgcat 318
           ||||| |||||||| ||  | ||||| |||||||||||||| || || ||||| ||||||
Sbjct: 186 aagcgttgggaacgaaaagaatgcaaaccaaacagtcttccgattctccacaaaatgcat 245

             
Query: 319 gt 320
           ||
Sbjct: 246 gt 247
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>gb|BT001990.1| Arabidopsis thaliana 50S ribosomal protein L24, chloroplast
           precursor (At5g54600) mRNA, complete cds
          Length = 797

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 259 aagcgatgggaacggaagaagtgcaagccaaacagtcttcctatgctgcacaagatgcat 318
           ||||| |||||||| ||  | ||||| |||||||||||||| || || ||||| ||||||
Sbjct: 194 aagcgttgggaacgaaaagaatgcaaaccaaacagtcttccgattctccacaaaatgcat 253

             
Query: 319 gt 320
           ||
Sbjct: 254 gt 255
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>emb|BX465221.7| Mouse DNA sequence from clone RP23-13E2 on chromosome X, complete
             sequence
          Length = 26830

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 858   tttacatttctgtcattttgat 879
             ||||||||||||||||||||||
Sbjct: 17068 tttacatttctgtcattttgat 17089
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>emb|AL806510.12| Mouse DNA sequence from clone RP23-155P8 on chromosome 4, complete
             sequence
          Length = 95087

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 508   aacatgatgctctactcaaaggagaa 533
             ||||||||||| ||||||||||||||
Sbjct: 51400 aacatgatgctgtactcaaaggagaa 51425
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>gb|AC187123.2| Gallus gallus BAC clone TAM31-25K21 from chromosome z, complete sequence
          Length = 221759

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 154    gcgagcaccagcgccttctggggca 178
              |||||||||||||||||| ||||||
Sbjct: 190550 gcgagcaccagcgccttcgggggca 190526
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>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome
          Length = 9965640

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 138     gctctccgtctcggccgcgag 158
               |||||||||||||||||||||
Sbjct: 3160476 gctctccgtctcggccgcgag 3160456
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>ref|NM_001073501.1| Oryza sativa (japonica cultivar-group) Os12g0548100 (Os12g0548100)
           mRNA, complete cds
          Length = 4113

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 180 cccgctcgccgccaccttctcctccgcgc 208
           ||||||||||||| || ||||||||||||
Sbjct: 347 cccgctcgccgcctccctctcctccgcgc 375
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>gb|AC186847.2| Gallus gallus BAC clone CH261-49E19 from chromosome z, complete sequence
          Length = 220137

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 154    gcgagcaccagcgccttctggggca 178
              |||||||||||||||||| ||||||
Sbjct: 200001 gcgagcaccagcgccttcgggggca 200025
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>ref|XM_001064858.1| PREDICTED: Rattus norvegicus similar to zinc finger, CCHC domain
           containing 7, transcript variant 2 (LOC683686), mRNA
          Length = 1056

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 430 ttgaagtccaagcacaagaaa 450
           |||||||||||||||||||||
Sbjct: 344 ttgaagtccaagcacaagaaa 364
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>ref|XM_001064799.1| PREDICTED: Rattus norvegicus similar to zinc finger, CCHC domain
           containing 7, transcript variant 1 (LOC683686), mRNA
          Length = 1757

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 430 ttgaagtccaagcacaagaaa 450
           |||||||||||||||||||||
Sbjct: 344 ttgaagtccaagcacaagaaa 364
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>ref|XM_216407.4| PREDICTED: Rattus norvegicus zinc finger, CCHC domain containing 7
            (predicted) (Zcchc7_predicted), mRNA
          Length = 3261

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 430  ttgaagtccaagcacaagaaa 450
            |||||||||||||||||||||
Sbjct: 1214 ttgaagtccaagcacaagaaa 1234
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>ref|NM_106488.2| Arabidopsis thaliana unknown protein (AT1G78410) mRNA, complete cds
          Length = 660

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  aggaccggcggcgacgatggc 104
           |||||||||||||||||||||
Sbjct: 287 aggaccggcggcgacgatggc 267
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>gb|AY821791.1| Arabidopsis thaliana tobacco rattle virus-induced protein variant 2
           (TRI) mRNA, complete cds; alternatively spliced
          Length = 315

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  aggaccggcggcgacgatggc 104
           |||||||||||||||||||||
Sbjct: 141 aggaccggcggcgacgatggc 121
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>gb|AY821790.1| Arabidopsis thaliana tobacco rattle virus-induced protein variant 1
           (TRI) mRNA, complete cds; alternatively spliced
          Length = 327

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  aggaccggcggcgacgatggc 104
           |||||||||||||||||||||
Sbjct: 141 aggaccggcggcgacgatggc 121
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>gb|BT011927.1| Arabidopsis thaliana At1g78410 mRNA sequence
          Length = 324

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  aggaccggcggcgacgatggc 104
           |||||||||||||||||||||
Sbjct: 138 aggaccggcggcgacgatggc 118
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>gb|AY102135.1| Arabidopsis thaliana At1g78410/F3F9_27 mRNA, complete cds
          Length = 327

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  aggaccggcggcgacgatggc 104
           |||||||||||||||||||||
Sbjct: 141 aggaccggcggcgacgatggc 121
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 180      cccgctcgccgccaccttctcctccgcgc 208
                ||||||||||||| || ||||||||||||
Sbjct: 22203223 cccgctcgccgcctccctctcctccgcgc 22203195
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 296     ttcctatgctgcacaagatgc 316
               |||||||||||||||||||||
Sbjct: 3633716 ttcctatgctgcacaagatgc 3633696
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>gb|AY070754.1| Arabidopsis thaliana At1g78410/F3F9_27 mRNA, complete cds
          Length = 653

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  aggaccggcggcgacgatggc 104
           |||||||||||||||||||||
Sbjct: 279 aggaccggcggcgacgatggc 259
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>emb|Y08067.1|CARNAPOLY C.album mRNA for mitochondrial single-subunit DNA-dependent RNA
            polymerase
          Length = 3793

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 809  caaagttgtcaccatttttgcaagc 833
            ||||||||||||| |||||||||||
Sbjct: 1027 caaagttgtcaccttttttgcaagc 1003
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>gb|AY085552.1| Arabidopsis thaliana clone 157 mRNA, complete sequence
          Length = 570

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  aggaccggcggcgacgatggc 104
           |||||||||||||||||||||
Sbjct: 288 aggaccggcggcgacgatggc 268
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 114     ggcgctgcagggcgccatggg 134
               |||||||||||||||||||||
Sbjct: 4250345 ggcgctgcagggcgccatggg 4250325
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>gb|AF548364.1| Metapenaeus ensis vitellogenin mRNA, complete cds
          Length = 8012

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 122 agggcgccatgggggcgctctccgt 146
           |||||||||||||||| ||||||||
Sbjct: 40  agggcgccatgggggctctctccgt 16
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>gb|AF548363.1| Metapenaeus ensis vitellogenin gene, complete cds
          Length = 10389

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 122 agggcgccatgggggcgctctccgt 146
           |||||||||||||||| ||||||||
Sbjct: 40  agggcgccatgggggctctctccgt 16
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>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1641_C04
          Length = 134367

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 296    ttcctatgctgcacaagatgc 316
              |||||||||||||||||||||
Sbjct: 103033 ttcctatgctgcacaagatgc 103013
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>dbj|AK108164.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-H03, full
           insert sequence
          Length = 1082

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 296 ttcctatgctgcacaagatgc 316
           |||||||||||||||||||||
Sbjct: 590 ttcctatgctgcacaagatgc 570
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>dbj|AK101059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022A10, full
           insert sequence
          Length = 4115

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 180 cccgctcgccgccaccttctcctccgcgc 208
           ||||||||||||| || ||||||||||||
Sbjct: 348 cccgctcgccgcctccctctcctccgcgc 376
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>emb|BX816295.1|CNS0ABXS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH3ZB09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1495

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  aggaccggcggcgacgatggc 104
           |||||||||||||||||||||
Sbjct: 351 aggaccggcggcgacgatggc 331
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>emb|BX818135.1|CNS0ABAB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL62ZG02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 560

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  aggaccggcggcgacgatggc 104
           |||||||||||||||||||||
Sbjct: 263 aggaccggcggcgacgatggc 243
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>gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana BAC F3F9 from chromosome I,
             complete sequence
          Length = 95769

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    aggaccggcggcgacgatggc 104
             |||||||||||||||||||||
Sbjct: 23566 aggaccggcggcgacgatggc 23586
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>dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB2047A4
          Length = 179110

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 857    ttttacatttctgtcattttgatga 881
              |||||||||||| ||||||||||||
Sbjct: 158766 ttttacatttctttcattttgatga 158790
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>dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1357H4, complete
             sequence
          Length = 160208

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 857   ttttacatttctgtcattttgatga 881
             |||||||||||| ||||||||||||
Sbjct: 79889 ttttacatttctttcattttgatga 79913
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>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155585

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 180   cccgctcgccgccaccttctcctccgcgc 208
             ||||||||||||| || ||||||||||||
Sbjct: 49787 cccgctcgccgcctccctctcctccgcgc 49815


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 142,861,137
Number of extensions: 7825886
Number of successful extensions: 153408
Number of sequences better than 10.0: 59
Number of HSP's gapped: 153393
Number of HSP's successfully gapped: 67
Length of query: 901
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 878
Effective length of database: 18,503,978,556
Effective search space: 16246493172168
Effective search space used: 16246493172168
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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