ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK070377:Os02g0465500 33 0.82

>AK070377:Os02g0465500 |
          Length = 247
 Score = 33.5 bits (75), Expect = 0.82
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = +1

Query: 1264 D*QVTCLFLTF*VSTLDI*TNYTLDIACIIIEGKLTKRTEE---VLKQSIDL 1410
            D Q+  +++   ++ LD+  +  L+IACII +GKLTK+ E    V+ Q  DL
Sbjct: 63   DYQMPLVWIDLEMTGLDVAKDRILEIACIITDGKLTKQIEGPDLVINQKKDL 114


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 76,699,333
Number of extensions: 1686759
Number of successful extensions: 4220
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4218
Number of HSP's successfully gapped: 1
Length of query: 929
Length of database: 15,399,855
Length adjustment: 110
Effective length of query: 819
Effective length of database: 10,995,345
Effective search space: 9005187555
Effective search space used: 9005187555
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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