| Clone Name | FLbaf74e02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK241746.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065202E13, full insert sequence Length = 3596 Score = 71.9 bits (36), Expect = 1e-08 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1333 ctggatattgcttgtattataatagaaggtaaacttaccaaacgaacagagg 1384 ||||| |||||||||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 497 ctggagattgcttgtattataacagacggtaaacttaccaaacgaatagagg 548
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 71.9 bits (36), Expect = 1e-08 Identities = 48/52 (92%) Strand = Plus / Minus Query: 1333 ctggatattgcttgtattataatagaaggtaaacttaccaaacgaacagagg 1384 ||||| |||||||||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 13666815 ctggagattgcttgtattataacagacggtaaacttaccaaacgaatagagg 13666764
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 71.9 bits (36), Expect = 1e-08 Identities = 48/52 (92%) Strand = Plus / Minus Query: 1333 ctggatattgcttgtattataatagaaggtaaacttaccaaacgaacagagg 1384 ||||| |||||||||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 61423 ctggagattgcttgtattataacagacggtaaacttaccaaacgaatagagg 61372
>gb|AY230323.1| Triticum aestivum mutant FCA-D1 (Fca) gene, complete cds Length = 10360 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 665 taaagtgtgggttaagatctaatttctccat 695 ||||||| ||||||||||||||||||||||| Sbjct: 1403 taaagtgcgggttaagatctaatttctccat 1433
>gb|AC091059.12| Homo sapiens chromosome 17, clone RP11-567L7, complete sequence Length = 179084 Score = 46.1 bits (23), Expect = 0.68 Identities = 23/23 (100%) Strand = Plus / Plus Query: 463 taagcatttcttgtttgtattaa 485 ||||||||||||||||||||||| Sbjct: 90155 taagcatttcttgtttgtattaa 90177
>ref|XM_001018563.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00285490) mRNA, complete cds Length = 4773 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 446 aattttatgtgcaactgtaagcattt 471 |||||||| ||||||||||||||||| Sbjct: 4179 aattttatctgcaactgtaagcattt 4154
>ref|XM_525325.2| PREDICTED: Pan troglodytes similar to Maf1 (LOC469941), mRNA Length = 2740 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1116 gttgttttctgatgcaaaatgc 1137 |||||||||||||||||||||| Sbjct: 1672 gttgttttctgatgcaaaatgc 1651
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 317 cgttcttcctgctgctggtcac 338 |||||||||||||||||||||| Sbjct: 3078875 cgttcttcctgctgctggtcac 3078896
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2035 ttcaaaataatcattttaaaga 2056 |||||||||||||||||||||| Sbjct: 233255 ttcaaaataatcattttaaaga 233234
>ref|NM_005461.3| Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) (MAFB), mRNA Length = 3378 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1116 gttgttttctgatgcaaaatgc 1137 |||||||||||||||||||||| Sbjct: 2322 gttgttttctgatgcaaaatgc 2301
>gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, complete sequence Length = 191823 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 868 aatatttgggagactgtgactaatat 893 ||||||||||||||| |||||||||| Sbjct: 141749 aatatttgggagactttgactaatat 141724
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 44.1 bits (22), Expect = 2.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1709 attgttaatttgcctgcgtctgccttgcaa 1738 ||||||||||||||||| |||||| ||||| Sbjct: 149753 attgttaatttgcctgcttctgccgtgcaa 149782
>gb|AC154620.2| Mus musculus BAC clone RP23-323M20 from chromosome 13, complete sequence Length = 193801 Score = 44.1 bits (22), Expect = 2.7 Identities = 31/33 (93%), Gaps = 2/33 (6%) Strand = Plus / Minus Query: 1923 atatgtcttctctcacactgtccacatgttcct 1955 |||||||||||||||| ||||||||||||||| Sbjct: 65530 atatgtcttctctcac--tgtccacatgttcct 65500
>gb|BC036689.1| Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian), mRNA (cDNA clone MGC:43127 IMAGE:5261053), complete cds Length = 3370 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1116 gttgttttctgatgcaaaatgc 1137 |||||||||||||||||||||| Sbjct: 2328 gttgttttctgatgcaaaatgc 2307
>gb|AC111162.5| Homo sapiens chromosome 11, clone RP11-75L18, complete sequence Length = 119944 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 643 ggcaaatgatcaaagtgaaaag 664 |||||||||||||||||||||| Sbjct: 59910 ggcaaatgatcaaagtgaaaag 59889
>emb|Z71265.1|CEM05B5 Caenorhabditis elegans Cosmid M05B5, complete sequence Length = 19144 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2028 ttttgagttcaaaataatcatt 2049 |||||||||||||||||||||| Sbjct: 798 ttttgagttcaaaataatcatt 777
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 2.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1709 attgttaatttgcctgcgtctgccttgcaa 1738 ||||||||||||||||| |||||| ||||| Sbjct: 1635217 attgttaatttgcctgcttctgccgtgcaa 1635246
>emb|AL353810.9| Human DNA sequence from clone RP11-261H15 on chromosome 9, complete sequence Length = 111330 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2052 aaagatgtggagtaattggcaaagat 2077 |||||||||||| ||||||||||||| Sbjct: 38690 aaagatgtggagaaattggcaaagat 38665
>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains the MAFB gene for v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian), a novel gene and two CpG islands, complete sequence Length = 145593 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1116 gttgttttctgatgcaaaatgc 1137 |||||||||||||||||||||| Sbjct: 91104 gttgttttctgatgcaaaatgc 91125
>gb|AC013604.9|AC013604 Homo sapiens, clone RP11-10E14, complete sequence Length = 167236 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2035 ttcaaaataatcattttaaaga 2056 |||||||||||||||||||||| Sbjct: 49450 ttcaaaataatcattttaaaga 49429
>emb|AL512589.4| Mouse DNA sequence from clone RP23-431C3 on chromosome 2, complete sequence Length = 170352 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1384 gaagttttaaaacagagtattg 1405 |||||||||||||||||||||| Sbjct: 137830 gaagttttaaaacagagtattg 137851
>emb|CR611755.1| full-length cDNA clone CS0DI019YB12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1180 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1116 gttgttttctgatgcaaaatgc 1137 |||||||||||||||||||||| Sbjct: 232 gttgttttctgatgcaaaatgc 211
>gb|AF134157.1|AF134157 Homo sapiens MAFB/Kreisler basic region/leucine zipper transcription factor (MAFB) mRNA, complete cds Length = 3071 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1116 gttgttttctgatgcaaaatgc 1137 |||||||||||||||||||||| Sbjct: 2015 gttgttttctgatgcaaaatgc 1994
>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence Length = 262831 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 656 agtgaaaagtaaagtgtgggtt 677 |||||||||||||||||||||| Sbjct: 199961 agtgaaaagtaaagtgtgggtt 199940 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 611,207,142 Number of extensions: 35457805 Number of successful extensions: 200122 Number of sequences better than 10.0: 24 Number of HSP's gapped: 200121 Number of HSP's successfully gapped: 24 Length of query: 2788 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2765 Effective length of database: 18,503,978,556 Effective search space: 51163500707340 Effective search space used: 51163500707340 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)