ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf77e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK099860:Os09g0249900 37 0.014
2AK110906:Os02g0103000 33 0.26
3AK110029: 29 3.7
4AK106928:Os02g0437300 29 3.7
5AK063308:Os01g0631500 29 3.7
6Os11g0134100:Os11g0134100 29 4.9
7Os06g0613800:Os06g0613800 29 4.9
8Os06g0548100:Os06g0548100 29 4.9
9Os05g0587500:Os05g0587500 29 4.9
10Os04g0120000:Os04g0120000 29 4.9
11AK106790:Os04g0462200 28 6.3
12AK060321:Os10g0514400 28 8.3

>AK099860:Os09g0249900 |
          Length = 146
 Score = 37.4 bits (85), Expect = 0.014
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +2

Query: 425 RSRAEQYAHHSSTFFCYEKSFTAVGIK 505
           R  +EQYA  S+TFFC EKS TAV IK
Sbjct: 45  RKFSEQYARRSNTFFCSEKSVTAVVIK 71



 Score = 30.8 bits (68), Expect = 1.3
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +2

Query: 260 AEQYAHRSGTFLCYDECVTAV 322
           +EQYA RS TF C ++ VTAV
Sbjct: 48  SEQYARRSNTFFCSEKSVTAV 68



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>AK110906:Os02g0103000 |
          Length = 156

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +3

Query: 372 KKGVAREGMLQEKRMAPLGAEQSSM----PTTPAPFSATRSPS 488
           K+GV  +G+L + R AP+   QS++    P  PAP + T S S
Sbjct: 42  KRGVTADGLLAQPRYAPVRTPQSALLLLDPPPPAPMTPTSSSS 84



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>AK110029: |
          Length = 835

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 369 SKKGVAREGMLQEKRMAPLGAEQSSMPTTPAPFSATRSPS 488
           S   VA  G L+ +R+ P G      P  P P +A  SPS
Sbjct: 542 SNPRVASAGSLESRRLKPSGHPAGRAPPPPPPAAAWSSPS 581



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>AK106928:Os02g0437300 |
          Length = 99

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 454 LQHLFLLREVLHRCRHQAAPGSIPPKSGSAPKGNFS 561
           +Q L     ++ R R  AA   +PP+S   P+G+FS
Sbjct: 43  IQRLISTCSIIQRSRSCAAYSLLPPRSSPRPRGSFS 78



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>AK063308:Os01g0631500 |
          Length = 279

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 393 GMLQEKRMAPLGAEQSSMPTTPAPFSATRSPSPLSASSCP 512
           G    + +A +   + S PT   P SA+ SPS +  SS P
Sbjct: 32  GASARRGLATVSVAKPSYPTVTTPMSASTSPSTMPMSSSP 71



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>Os11g0134100:Os11g0134100 |
          Length = 1877

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +1

Query: 133 SRFSNPSACRRHGSGDERDHLV*GDYFWQGKQCHKSRGCPSRSGAVCPPLRYLFVL*RVC 312
           S F N S     GS D+  ++      W  + CH + G  SR  ++C   ++  V    C
Sbjct: 571 SDFCNKSVNHICGSVDDEANV------WHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKC 624

Query: 313 HCC 321
           H C
Sbjct: 625 HSC 627



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>Os06g0613800:Os06g0613800 |
          Length = 1506

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +1

Query: 133 SRFSNPSACRRHGSGDERDHLV*GDYFWQGKQCHKSRGCPSRSGAVCPPLRYLFVL*RVC 312
           S F N S     GS D+  ++      W  + CH + G  SR  ++C   ++  V    C
Sbjct: 793 SDFCNKSVNHICGSVDDEANV------WHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKC 846

Query: 313 HCC 321
           H C
Sbjct: 847 HSC 849



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>Os06g0548100:Os06g0548100 |
          Length = 1746

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +1

Query: 133 SRFSNPSACRRHGSGDERDHLV*GDYFWQGKQCHKSRGCPSRSGAVCPPLRYLFVL*RVC 312
           S F N S     GS D+  ++      W  + CH + G  SR  ++C   ++  V    C
Sbjct: 309 SDFCNKSVNHICGSVDDEANV------WHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKC 362

Query: 313 HCC 321
           H C
Sbjct: 363 HSC 365



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>Os05g0587500:Os05g0587500 |
          Length = 1456

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +1

Query: 133 SRFSNPSACRRHGSGDERDHLV*GDYFWQGKQCHKSRGCPSRSGAVCPPLRYLFVL*RVC 312
           S F N S     GS D+  ++      W  + CH + G  SR  ++C   ++  V    C
Sbjct: 609 SDFCNKSVNHICGSVDDEANV------WHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKC 662

Query: 313 HCC 321
           H C
Sbjct: 663 HSC 665



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>Os04g0120000:Os04g0120000 |
          Length = 2422

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +1

Query: 133  SRFSNPSACRRHGSGDERDHLV*GDYFWQGKQCHKSRGCPSRSGAVCPPLRYLFVL*RVC 312
            S F N S     GS D+  ++      W  + CH + G  SR  ++C   ++  V    C
Sbjct: 1516 SDFCNKSVNHICGSVDDEANV------WHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKC 1569

Query: 313  HCC 321
            H C
Sbjct: 1570 HSC 1572



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>AK106790:Os04g0462200 |
          Length = 200

 Score = 28.5 bits (62), Expect = 6.3
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
 Frame = +3

Query: 420 PLGAEQSSMPTTPAPFSATR------SPSPLSASSCPWFDSSQERI 539
           P     S+ P+TP P + TR      +PSP ++S  P + S  + I
Sbjct: 136 PRSTPNSTAPSTPTPVTVTRAPPQQMTPSPKTSSQTPEYSSGLKLI 181



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>AK060321:Os10g0514400 |
          Length = 142

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 420 PLGAEQSSMPTTPAPFSATRSPSPLSASSCP 512
           P G   S +   P P+S++ SP+P  A + P
Sbjct: 10  PCGVPSSPLTPVPLPYSSSSSPAPAFAPTTP 40


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 26,643,946
Number of extensions: 649041
Number of successful extensions: 2531
Number of sequences better than 10.0: 12
Number of HSP's gapped: 2526
Number of HSP's successfully gapped: 13
Length of query: 289
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 189
Effective length of database: 11,395,755
Effective search space: 2153797695
Effective search space used: 2153797695
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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