ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf77d24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT829406.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA009P13, full insert sequence Length = 1969 Score = 468 bits (236), Expect = e-128 Identities = 644/780 (82%) Strand = Plus / Plus Query: 299 gatggcttgttctgatggtgaggctaagcaccaatggatacagaatgtccagtcaggagg 358 ||||| |||||| ||||||||| | |||| || ||||| || ||||| |||||||||| Sbjct: 129 gatggattgttccaatggtgaggttcagcatcagtggatggaggatgtcaagtcaggagg 188 Query: 359 agcagttccttgtctaccacctgaaaactgtcctaatggctgggctactcctcctggtga 418 |||||| || | ||| ||||| ||||| || ||||||||||||||||| || || || Sbjct: 189 agcagtcccatttcttgaccctgacaactgccccaatggctgggctactcccccagggga 248 Query: 419 cacatttatggtcagaggcccagaatattttgcaactaaggcaaaaatacctggtgggga 478 |||||| |||||||||||||| || ||| ||||||| |||| || ||||| |||||||| Sbjct: 249 cacattcatggtcagaggccctgattatcttgcaaccaaggtgaagataccaggtgggga 308 Query: 479 gtatcttctgaagcctcttggagttgattggatcaaaggctcagtaaaaatctgcgaggt 538 ||||||||| |||||||| || |||||||||| ||| || | | || || |||||| | Sbjct: 309 gtatcttctaaagcctctcgggtttgattggatgaaaagccccgcgaagatatgcgagat 368 Query: 539 cctgaaaaacaggaaccatcgtgtgagaaaagccatcgatgaggaggttttgcacggcag 598 ||||| |||| || ||||||||||| ||||||||||| | |||||||||| || | Sbjct: 369 tctgaataacaagagtcatcgtgtgaggaaagccatcgacggcgaggttttgcgtggtaa 428 Query: 599 taaaccttttgtctgggcttttaacttgcaactgcccagcaaggagaactacagcgcgat 658 | | ||||| ||||||||||| ||| ||||||||||||||||||| || ||||| || || Sbjct: 429 tcagcctttcgtctgggctttcaacctgcaactgcccagcaaggataattacagtgctat 488 Query: 659 attttactttgtctcactggaacctgtacccgaaggctcgctgatggatcaattccttaa 718 ||| |||||||| || ||||| || ||||| |||||||| || |||||||| ||| | || Sbjct: 489 attctactttgtgtcgctggagccggtaccggaaggctcacttatggatcagttcttgaa 548 Query: 719 aggggatgatgctctccgtaaatccaggcttaaactgatagcaaacatagttaaggggcc 778 ||| ||||| ||| |||| ||||| |||||||| || || || |||||||||| ||||| Sbjct: 549 aggagatgaggctttccggaaatctaggcttaagctaatcgcgaacatagttagagggcc 608 Query: 779 ctggattgtccgaaaagctgtgggtgaacaagccatctgcatacttggcagagcactttc 838 |||||||| |||| ||||||||| |||||||| || |||||| | || || || ||| | Sbjct: 609 ttggattgttcgaacagctgtgggagaacaagctatttgcatattgggtagggctcttac 668 Query: 839 gtgcaagtatgtccagggttcaaacttcatcgaagttgatgtggatattgggtcttccat 898 |||||||||| ||||| ||||||||||| ||| | ||||||||| |||| ||||| || Sbjct: 669 gtgcaagtatactcagggatcaaacttcattgaaatcgatgtggatgttggatcttctat 728 Query: 899 agttgcaaatgcaattgtccatctggcgtttggttacgtggcgacactgactgtagattt 958 || ||||| |||||||| ||| ||||||||||||||||| ||| || || |||||| | Sbjct: 729 tgtcgcaaacgcaattgttcatttggcgtttggttacgtgcagacgctaacagtagatct 788 Query: 959 agcatttgttattgagagtcaagctgaatcagagctccccgagagacttcttggggctgt 1018 |||||| |||||||| |||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 789 agcattccttattgagggtcagaccgaatcagagctccccgagagacttcttggagctgt 848 Query: 1019 aaggttctctgagttgagtccgggatcagctggtgtgtacgaagtgccatctgaagagca 1078 |||||||||||||||| |||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 849 gaggttctctgagttgaatccgggttcggctggtgtgtatgaagtgccatctgaggagca 908
>ref|NM_001067540.1| Oryza sativa (japonica cultivar-group) Os08g0152600 (Os08g0152600) mRNA, complete cds Length = 1688 Score = 468 bits (236), Expect = e-128 Identities = 644/780 (82%) Strand = Plus / Plus Query: 299 gatggcttgttctgatggtgaggctaagcaccaatggatacagaatgtccagtcaggagg 358 ||||| |||||| ||||||||| | |||| || ||||| || ||||| |||||||||| Sbjct: 268 gatggattgttccaatggtgaggttcagcatcagtggatggaggatgtcaagtcaggagg 327 Query: 359 agcagttccttgtctaccacctgaaaactgtcctaatggctgggctactcctcctggtga 418 |||||| || | ||| ||||| ||||| || ||||||||||||||||| || || || Sbjct: 328 agcagtcccatttcttgaccctgacaactgccccaatggctgggctactcccccagggga 387 Query: 419 cacatttatggtcagaggcccagaatattttgcaactaaggcaaaaatacctggtgggga 478 |||||| |||||||||||||| || ||| ||||||| |||| || ||||| |||||||| Sbjct: 388 cacattcatggtcagaggccctgattatcttgcaaccaaggtgaagataccaggtgggga 447 Query: 479 gtatcttctgaagcctcttggagttgattggatcaaaggctcagtaaaaatctgcgaggt 538 ||||||||| |||||||| || |||||||||| ||| || | | || || |||||| | Sbjct: 448 gtatcttctaaagcctctcgggtttgattggatgaaaagccccgcgaagatatgcgagat 507 Query: 539 cctgaaaaacaggaaccatcgtgtgagaaaagccatcgatgaggaggttttgcacggcag 598 ||||| |||| || ||||||||||| ||||||||||| | |||||||||| || | Sbjct: 508 tctgaataacaagagtcatcgtgtgaggaaagccatcgacggcgaggttttgcgtggtaa 567 Query: 599 taaaccttttgtctgggcttttaacttgcaactgcccagcaaggagaactacagcgcgat 658 | | ||||| ||||||||||| ||| ||||||||||||||||||| || ||||| || || Sbjct: 568 tcagcctttcgtctgggctttcaacctgcaactgcccagcaaggataattacagtgctat 627 Query: 659 attttactttgtctcactggaacctgtacccgaaggctcgctgatggatcaattccttaa 718 ||| |||||||| || ||||| || ||||| |||||||| || |||||||| ||| | || Sbjct: 628 attctactttgtgtcgctggagccggtaccggaaggctcacttatggatcagttcttgaa 687 Query: 719 aggggatgatgctctccgtaaatccaggcttaaactgatagcaaacatagttaaggggcc 778 ||| ||||| ||| |||| ||||| |||||||| || || || |||||||||| ||||| Sbjct: 688 aggagatgaggctttccggaaatctaggcttaagctaatcgcgaacatagttagagggcc 747 Query: 779 ctggattgtccgaaaagctgtgggtgaacaagccatctgcatacttggcagagcactttc 838 |||||||| |||| ||||||||| |||||||| || |||||| | || || || ||| | Sbjct: 748 ttggattgttcgaacagctgtgggagaacaagctatttgcatattgggtagggctcttac 807 Query: 839 gtgcaagtatgtccagggttcaaacttcatcgaagttgatgtggatattgggtcttccat 898 |||||||||| ||||| ||||||||||| ||| | ||||||||| |||| ||||| || Sbjct: 808 gtgcaagtatactcagggatcaaacttcattgaaatcgatgtggatgttggatcttctat 867 Query: 899 agttgcaaatgcaattgtccatctggcgtttggttacgtggcgacactgactgtagattt 958 || ||||| |||||||| ||| ||||||||||||||||| ||| || || |||||| | Sbjct: 868 tgtcgcaaacgcaattgttcatttggcgtttggttacgtgcagacgctaacagtagatct 927 Query: 959 agcatttgttattgagagtcaagctgaatcagagctccccgagagacttcttggggctgt 1018 |||||| |||||||| |||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 928 agcattccttattgagggtcagaccgaatcagagctccccgagagacttcttggagctgt 987 Query: 1019 aaggttctctgagttgagtccgggatcagctggtgtgtacgaagtgccatctgaagagca 1078 |||||||||||||||| |||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 988 gaggttctctgagttgaatccgggttcggctggtgtgtatgaagtgccatctgaggagca 1047
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 468 bits (236), Expect = e-128 Identities = 644/780 (82%) Strand = Plus / Minus Query: 299 gatggcttgttctgatggtgaggctaagcaccaatggatacagaatgtccagtcaggagg 358 ||||| |||||| ||||||||| | |||| || ||||| || ||||| |||||||||| Sbjct: 3009213 gatggattgttccaatggtgaggttcagcatcagtggatggaggatgtcaagtcaggagg 3009154 Query: 359 agcagttccttgtctaccacctgaaaactgtcctaatggctgggctactcctcctggtga 418 |||||| || | ||| ||||| ||||| || ||||||||||||||||| || || || Sbjct: 3009153 agcagtcccatttcttgaccctgacaactgccccaatggctgggctactcccccagggga 3009094 Query: 419 cacatttatggtcagaggcccagaatattttgcaactaaggcaaaaatacctggtgggga 478 |||||| |||||||||||||| || ||| ||||||| |||| || ||||| |||||||| Sbjct: 3009093 cacattcatggtcagaggccctgattatcttgcaaccaaggtgaagataccaggtgggga 3009034 Query: 479 gtatcttctgaagcctcttggagttgattggatcaaaggctcagtaaaaatctgcgaggt 538 ||||||||| |||||||| || |||||||||| ||| || | | || || |||||| | Sbjct: 3009033 gtatcttctaaagcctctcgggtttgattggatgaaaagccccgcgaagatatgcgagat 3008974 Query: 539 cctgaaaaacaggaaccatcgtgtgagaaaagccatcgatgaggaggttttgcacggcag 598 ||||| |||| || ||||||||||| ||||||||||| | |||||||||| || | Sbjct: 3008973 tctgaataacaagagtcatcgtgtgaggaaagccatcgacggcgaggttttgcgtggtaa 3008914 Query: 599 taaaccttttgtctgggcttttaacttgcaactgcccagcaaggagaactacagcgcgat 658 | | ||||| ||||||||||| ||| ||||||||||||||||||| || ||||| || || Sbjct: 3008913 tcagcctttcgtctgggctttcaacctgcaactgcccagcaaggataattacagtgctat 3008854 Query: 659 attttactttgtctcactggaacctgtacccgaaggctcgctgatggatcaattccttaa 718 ||| |||||||| || ||||| || ||||| |||||||| || |||||||| ||| | || Sbjct: 3008853 attctactttgtgtcgctggagccggtaccggaaggctcacttatggatcagttcttgaa 3008794 Query: 719 aggggatgatgctctccgtaaatccaggcttaaactgatagcaaacatagttaaggggcc 778 ||| ||||| ||| |||| ||||| |||||||| || || || |||||||||| ||||| Sbjct: 3008793 aggagatgaggctttccggaaatctaggcttaagctaatcgcgaacatagttagagggcc 3008734 Query: 779 ctggattgtccgaaaagctgtgggtgaacaagccatctgcatacttggcagagcactttc 838 |||||||| |||| ||||||||| |||||||| || |||||| | || || || ||| | Sbjct: 3008733 ttggattgttcgaacagctgtgggagaacaagctatttgcatattgggtagggctcttac 3008674 Query: 839 gtgcaagtatgtccagggttcaaacttcatcgaagttgatgtggatattgggtcttccat 898 |||||||||| ||||| ||||||||||| ||| | ||||||||| |||| ||||| || Sbjct: 3008673 gtgcaagtatactcagggatcaaacttcattgaaatcgatgtggatgttggatcttctat 3008614 Query: 899 agttgcaaatgcaattgtccatctggcgtttggttacgtggcgacactgactgtagattt 958 || ||||| |||||||| ||| ||||||||||||||||| ||| || || |||||| | Sbjct: 3008613 tgtcgcaaacgcaattgttcatttggcgtttggttacgtgcagacgctaacagtagatct 3008554 Query: 959 agcatttgttattgagagtcaagctgaatcagagctccccgagagacttcttggggctgt 1018 |||||| |||||||| |||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 3008553 agcattccttattgagggtcagaccgaatcagagctccccgagagacttcttggagctgt 3008494 Query: 1019 aaggttctctgagttgagtccgggatcagctggtgtgtacgaagtgccatctgaagagca 1078 |||||||||||||||| |||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 3008493 gaggttctctgagttgaatccgggttcggctggtgtgtatgaagtgccatctgaggagca 3008434
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 468 bits (236), Expect = e-128 Identities = 644/780 (82%) Strand = Plus / Minus Query: 299 gatggcttgttctgatggtgaggctaagcaccaatggatacagaatgtccagtcaggagg 358 ||||| |||||| ||||||||| | |||| || ||||| || ||||| |||||||||| Sbjct: 59936 gatggattgttccaatggtgaggttcagcatcagtggatggaggatgtcaagtcaggagg 59877 Query: 359 agcagttccttgtctaccacctgaaaactgtcctaatggctgggctactcctcctggtga 418 |||||| || | ||| ||||| ||||| || ||||||||||||||||| || || || Sbjct: 59876 agcagtcccatttcttgaccctgacaactgccccaatggctgggctactcccccagggga 59817 Query: 419 cacatttatggtcagaggcccagaatattttgcaactaaggcaaaaatacctggtgggga 478 |||||| |||||||||||||| || ||| ||||||| |||| || ||||| |||||||| Sbjct: 59816 cacattcatggtcagaggccctgattatcttgcaaccaaggtgaagataccaggtgggga 59757 Query: 479 gtatcttctgaagcctcttggagttgattggatcaaaggctcagtaaaaatctgcgaggt 538 ||||||||| |||||||| || |||||||||| ||| || | | || || |||||| | Sbjct: 59756 gtatcttctaaagcctctcgggtttgattggatgaaaagccccgcgaagatatgcgagat 59697 Query: 539 cctgaaaaacaggaaccatcgtgtgagaaaagccatcgatgaggaggttttgcacggcag 598 ||||| |||| || ||||||||||| ||||||||||| | |||||||||| || | Sbjct: 59696 tctgaataacaagagtcatcgtgtgaggaaagccatcgacggcgaggttttgcgtggtaa 59637 Query: 599 taaaccttttgtctgggcttttaacttgcaactgcccagcaaggagaactacagcgcgat 658 | | ||||| ||||||||||| ||| ||||||||||||||||||| || ||||| || || Sbjct: 59636 tcagcctttcgtctgggctttcaacctgcaactgcccagcaaggataattacagtgctat 59577 Query: 659 attttactttgtctcactggaacctgtacccgaaggctcgctgatggatcaattccttaa 718 ||| |||||||| || ||||| || ||||| |||||||| || |||||||| ||| | || Sbjct: 59576 attctactttgtgtcgctggagccggtaccggaaggctcacttatggatcagttcttgaa 59517 Query: 719 aggggatgatgctctccgtaaatccaggcttaaactgatagcaaacatagttaaggggcc 778 ||| ||||| ||| |||| ||||| |||||||| || || || |||||||||| ||||| Sbjct: 59516 aggagatgaggctttccggaaatctaggcttaagctaatcgcgaacatagttagagggcc 59457 Query: 779 ctggattgtccgaaaagctgtgggtgaacaagccatctgcatacttggcagagcactttc 838 |||||||| |||| ||||||||| |||||||| || |||||| | || || || ||| | Sbjct: 59456 ttggattgttcgaacagctgtgggagaacaagctatttgcatattgggtagggctcttac 59397 Query: 839 gtgcaagtatgtccagggttcaaacttcatcgaagttgatgtggatattgggtcttccat 898 |||||||||| ||||| ||||||||||| ||| | ||||||||| |||| ||||| || Sbjct: 59396 gtgcaagtatactcagggatcaaacttcattgaaatcgatgtggatgttggatcttctat 59337 Query: 899 agttgcaaatgcaattgtccatctggcgtttggttacgtggcgacactgactgtagattt 958 || ||||| |||||||| ||| ||||||||||||||||| ||| || || |||||| | Sbjct: 59336 tgtcgcaaacgcaattgttcatttggcgtttggttacgtgcagacgctaacagtagatct 59277 Query: 959 agcatttgttattgagagtcaagctgaatcagagctccccgagagacttcttggggctgt 1018 |||||| |||||||| |||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 59276 agcattccttattgagggtcagaccgaatcagagctccccgagagacttcttggagctgt 59217 Query: 1019 aaggttctctgagttgagtccgggatcagctggtgtgtacgaagtgccatctgaagagca 1078 |||||||||||||||| |||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 59216 gaggttctctgagttgaatccgggttcggctggtgtgtatgaagtgccatctgaggagca 59157
>dbj|AK068444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154O05, full insert sequence Length = 1689 Score = 468 bits (236), Expect = e-128 Identities = 644/780 (82%) Strand = Plus / Plus Query: 299 gatggcttgttctgatggtgaggctaagcaccaatggatacagaatgtccagtcaggagg 358 ||||| |||||| ||||||||| | |||| || ||||| || ||||| |||||||||| Sbjct: 269 gatggattgttccaatggtgaggttcagcatcagtggatggaggatgtcaagtcaggagg 328 Query: 359 agcagttccttgtctaccacctgaaaactgtcctaatggctgggctactcctcctggtga 418 |||||| || | ||| ||||| ||||| || ||||||||||||||||| || || || Sbjct: 329 agcagtcccatttcttgaccctgacaactgccccaatggctgggctactcccccagggga 388 Query: 419 cacatttatggtcagaggcccagaatattttgcaactaaggcaaaaatacctggtgggga 478 |||||| |||||||||||||| || ||| ||||||| |||| || ||||| |||||||| Sbjct: 389 cacattcatggtcagaggccctgattatcttgcaaccaaggtgaagataccaggtgggga 448 Query: 479 gtatcttctgaagcctcttggagttgattggatcaaaggctcagtaaaaatctgcgaggt 538 ||||||||| |||||||| || |||||||||| ||| || | | || || |||||| | Sbjct: 449 gtatcttctaaagcctctcgggtttgattggatgaaaagccccgcgaagatatgcgagat 508 Query: 539 cctgaaaaacaggaaccatcgtgtgagaaaagccatcgatgaggaggttttgcacggcag 598 ||||| |||| || ||||||||||| ||||||||||| | |||||||||| || | Sbjct: 509 tctgaataacaagagtcatcgtgtgaggaaagccatcgacggcgaggttttgcgtggtaa 568 Query: 599 taaaccttttgtctgggcttttaacttgcaactgcccagcaaggagaactacagcgcgat 658 | | ||||| ||||||||||| ||| ||||||||||||||||||| || ||||| || || Sbjct: 569 tcagcctttcgtctgggctttcaacctgcaactgcccagcaaggataattacagtgctat 628 Query: 659 attttactttgtctcactggaacctgtacccgaaggctcgctgatggatcaattccttaa 718 ||| |||||||| || ||||| || ||||| |||||||| || |||||||| ||| | || Sbjct: 629 attctactttgtgtcgctggagccggtaccggaaggctcacttatggatcagttcttgaa 688 Query: 719 aggggatgatgctctccgtaaatccaggcttaaactgatagcaaacatagttaaggggcc 778 ||| ||||| ||| |||| ||||| |||||||| || || || |||||||||| ||||| Sbjct: 689 aggagatgaggctttccggaaatctaggcttaagctaatcgcgaacatagttagagggcc 748 Query: 779 ctggattgtccgaaaagctgtgggtgaacaagccatctgcatacttggcagagcactttc 838 |||||||| |||| ||||||||| |||||||| || |||||| | || || || ||| | Sbjct: 749 ttggattgttcgaacagctgtgggagaacaagctatttgcatattgggtagggctcttac 808 Query: 839 gtgcaagtatgtccagggttcaaacttcatcgaagttgatgtggatattgggtcttccat 898 |||||||||| ||||| ||||||||||| ||| | ||||||||| |||| ||||| || Sbjct: 809 gtgcaagtatactcagggatcaaacttcattgaaatcgatgtggatgttggatcttctat 868 Query: 899 agttgcaaatgcaattgtccatctggcgtttggttacgtggcgacactgactgtagattt 958 || ||||| |||||||| ||| ||||||||||||||||| ||| || || |||||| | Sbjct: 869 tgtcgcaaacgcaattgttcatttggcgtttggttacgtgcagacgctaacagtagatct 928 Query: 959 agcatttgttattgagagtcaagctgaatcagagctccccgagagacttcttggggctgt 1018 |||||| |||||||| |||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 929 agcattccttattgagggtcagaccgaatcagagctccccgagagacttcttggagctgt 988 Query: 1019 aaggttctctgagttgagtccgggatcagctggtgtgtacgaagtgccatctgaagagca 1078 |||||||||||||||| |||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 989 gaggttctctgagttgaatccgggttcggctggtgtgtatgaagtgccatctgaggagca 1048
>gb|AY110585.1| Zea mays CL22533_2 mRNA sequence Length = 712 Score = 196 bits (99), Expect = 2e-46 Identities = 261/315 (82%) Strand = Plus / Minus Query: 771 aaggggccctggattgtccgaaaagctgtgggtgaacaagccatctgcatacttggcaga 830 |||||||||||||||||||| | ||||| |||||||| |||||||| ||||| || ||| Sbjct: 705 aaggggccctggattgtccggacggctgttggtgaacaggccatctgtatactggggaga 646 Query: 831 gcactttcgtgcaagtatgtccagggttcaaacttcatcgaagttgatgtggatattggg 890 || || |||||||||||||| || || ||||||||||||||||| ||||||||||| ||| Sbjct: 645 gccctctcgtgcaagtatgttcaaggatcaaacttcatcgaagtcgatgtggatatcggg 586 Query: 891 tcttccatagttgcaaatgcaattgtccatctggcgtttggttacgtggcgacactgact 950 ||||| |||||||||||||| || || ||| |||| ||||| || | | || || ||| Sbjct: 585 tcttctatagttgcaaatgcgatcgttcatttggcatttggctatattacaacgctaact 526 Query: 951 gtagatttagcatttgttattgagagtcaagctgaatcagagctccccgagagacttctt 1010 |||||||| || ||| | |||||||||||| | || | |||||||| ||||||||| || Sbjct: 525 gtagatttggcctttctcattgagagtcaaaccgagccggagctccctgagagacttatt 466 Query: 1011 ggggctgtaaggttctctgagttgagtccgggatcagctggtgtgtacgaagtgccatct 1070 || || |||||||| |||||||| | ||| |||||||||||| ||| ||| || ||| Sbjct: 465 ggagcagtaaggttttctgagttaaatccaggatcagctggtttgtttgaaaggcggtct 406 Query: 1071 gaagagcagcaggaa 1085 |||||||| |||||| Sbjct: 405 gaagagcatcaggaa 391
>ref|NM_100485.1| Arabidopsis thaliana unknown protein (AT1G06050) mRNA, complete cds Length = 1292 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 738 aaatccaggcttaaactgatagcaaacatagttaaggggccctggattgtccgaaaagct 797 ||||| |||||||||||||| |||||||| || || || || |||||||| |||||||| Sbjct: 677 aaatcgaggcttaaactgattgcaaacattgtcaaaggcccttggattgttagaaaagct 736 Query: 798 gtgggtgaacaagccatctg 817 || || || ||||| ||||| Sbjct: 737 gttggagagcaagcgatctg 756
>gb|AY088922.1| Arabidopsis thaliana clone 99665 mRNA, complete sequence Length = 1292 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 738 aaatccaggcttaaactgatagcaaacatagttaaggggccctggattgtccgaaaagct 797 ||||| |||||||||||||| |||||||| || || || || |||||||| |||||||| Sbjct: 677 aaatcgaggcttaaactgattgcaaacattgtcaaaggcccttggattgttagaaaagct 736 Query: 798 gtgggtgaacaagccatctg 817 || || || ||||| ||||| Sbjct: 737 gttggagagcaagcgatctg 756
>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1, complete sequence Length = 74316 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 738 aaatccaggcttaaactgatagcaaacatagttaaggggccctggattgtccgaaaagct 797 ||||| |||||||||||||| |||||||| || || || || |||||||| |||||||| Sbjct: 30367 aaatcgaggcttaaactgattgcaaacattgtcaaaggcccttggattgttagaaaagct 30308 Query: 798 gtgggtgaacaagccatctg 817 || || || ||||| ||||| Sbjct: 30307 gttggagagcaagcgatctg 30288
>emb|AL121972.17|HSJ397H23 Human DNA sequence from clone RP3-397H23 on chromosome 6q12-14.1 Contains the 3' end of SLC17A5 gene for solute carrier family 17 (anion/sugar transporter), member 5, a ribosomal S27 protein pseudogene and a CpG island, complete sequence Length = 113202 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1333 tttttacaatgatgaacgacggcctcag 1360 |||||||||||||||||||| ||||||| Sbjct: 30721 tttttacaatgatgaacgactgcctcag 30694
>gb|AC109139.15| Mus musculus chromosome 8, clone RP23-47L13, complete sequence Length = 268904 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Minus Query: 378 cctgaaaactgtcctaatggctg 400 ||||||||||||||||||||||| Sbjct: 52942 cctgaaaactgtcctaatggctg 52920
>gb|EF058320.1| Synthetic construct Saccharomyces cerevisiae clone FLH237757.01X YOR071C, complete sequence Length = 1797 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1168 ctagctcagaaaacactaacg 1188 ||||||||||||||||||||| Sbjct: 1709 ctagctcagaaaacactaacg 1729
>gb|AC188402.1| Callithrix jacchus chromosome UNK clone CH259-101H12, complete sequence Length = 177913 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cagtattctaatttccaatta 29 ||||||||||||||||||||| Sbjct: 68983 cagtattctaatttccaatta 69003
>gb|AC187997.1| Gallus gallus chromosome Z clone TAM31-44C23, complete sequence Length = 224521 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 tgacacatttatggtcagagg 436 ||||||||||||||||||||| Sbjct: 146813 tgacacatttatggtcagagg 146793
>ref|NM_103587.2| Arabidopsis thaliana beta-galactosidase (AT1G45130) mRNA, complete cds Length = 2546 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 gttgattggatcaaaggctca 521 ||||||||||||||||||||| Sbjct: 2020 gttgattggatcaaaggctca 2040
>ref|NM_074512.1| Caenorhabditis elegans Serpentine Receptor, class H family member (srh-140) (srh-140) mRNA, complete cds Length = 1074 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 ttccttgtctaccacctgaaa 384 ||||||||||||||||||||| Sbjct: 521 ttccttgtctaccacctgaaa 541
>gb|AY093977.1| Arabidopsis thaliana At1g45130/F27F5_20 mRNA, complete cds Length = 2199 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 gttgattggatcaaaggctca 521 ||||||||||||||||||||| Sbjct: 1825 gttgattggatcaaaggctca 1845
>emb|AL021175.1|CEY6E2A Caenorhabditis elegans YAC Y6E2A, complete sequence Length = 22377 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 ttccttgtctaccacctgaaa 384 ||||||||||||||||||||| Sbjct: 14454 ttccttgtctaccacctgaaa 14474
>emb|AL929302.16| Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open reading frame 15, the RBBP7 gene for retinoblastoma binding protein 7, the 5' end of the REPS2 gene for RALBP1 associated Eps domain containing 2, a novel pseudogene and four CpG islands, complete sequence Length = 172614 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1444 tattaactaaatttacctttt 1464 ||||||||||||||||||||| Sbjct: 57053 tattaactaaatttacctttt 57033
>gb|AY069911.1| Arabidopsis thaliana At1g45130/F27F5_20 mRNA, complete cds Length = 2451 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 gttgattggatcaaaggctca 521 ||||||||||||||||||||| Sbjct: 1960 gttgattggatcaaaggctca 1980
>gb|AY058098.1| Arabidopsis thaliana At1g45130/F27F5_20 mRNA, complete cds Length = 2445 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 gttgattggatcaaaggctca 521 ||||||||||||||||||||| Sbjct: 1940 gttgattggatcaaaggctca 1960
>emb|Z70678.1|SCXV55KB S.cerevisiae chromosome XV DNA, 54.7 kb region Length = 54719 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1168 ctagctcagaaaacactaacg 1188 ||||||||||||||||||||| Sbjct: 36400 ctagctcagaaaacactaacg 36380
>gb|AC073065.6| Homo sapiens BAC clone RP11-149O3 from 2, complete sequence Length = 175345 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1441 acatattaactaaatttacct 1461 ||||||||||||||||||||| Sbjct: 168268 acatattaactaaatttacct 168288
>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome I, complete sequence Length = 137336 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 gttgattggatcaaaggctca 521 ||||||||||||||||||||| Sbjct: 94460 gttgattggatcaaaggctca 94480
>emb|AJ270301.1|ATH270301 Arabidopsis thaliana mRNA for putative beta-galactosidase (BGAL5 gene) Length = 2388 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 gttgattggatcaaaggctca 521 ||||||||||||||||||||| Sbjct: 1867 gttgattggatcaaaggctca 1887
>emb|Z74979.1|SCYOR071C S.cerevisiae chromosome XV reading frame ORF YOR071c Length = 3681 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1168 ctagctcagaaaacactaacg 1188 ||||||||||||||||||||| Sbjct: 1748 ctagctcagaaaacactaacg 1728 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 326,159,381 Number of extensions: 16744215 Number of successful extensions: 337652 Number of sequences better than 10.0: 26 Number of HSP's gapped: 337636 Number of HSP's successfully gapped: 27 Length of query: 1795 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1772 Effective length of database: 18,503,978,556 Effective search space: 32789050001232 Effective search space used: 32789050001232 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
