ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf77d07 |
|---|---|
| Clone Library Name | barley_pub |
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 226 bits (576), Expect = 2e-58 Identities = 120/286 (41%), Positives = 170/286 (59%), Gaps = 17/286 (5%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 + T+W+G+L+ W+ E ++ + G+ V +K+IRNR++G++ GY FVEF S A A Sbjct: 91 QKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSA 150 Query: 538 LQNFAGHVMPNTDRAFKLNWASYS-VGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 + + +P T+ FKLNWAS + EK AS++SIFVGDL+ +V + + LFA++ Sbjct: 151 M-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASR 209 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTS 894 Y S K AK++ D T SRGYGFVRF D+ D+ A+ EM G C RPIR+G ATP+ + Sbjct: 210 YNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKA 269 Query: 895 ----------------GDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDV 1026 G + D+ N TV+VGGL VSE+EL+ F +G++ Sbjct: 270 HVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEI 329 Query: 1027 ASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 VKIP GK CGFVQF+NR AE A+ L G +G +RLSWGR+ Sbjct: 330 VYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
>O13759:CSX1_SCHPO RNA-binding post-transcriptional regulator csx1 - Schizosaccharomyces| pombe (Fission yeast) Length = 632 Score = 194 bits (493), Expect = 9e-49 Identities = 112/296 (37%), Positives = 166/296 (56%), Gaps = 20/296 (6%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSE--GYGFVEFYSHASAEKAL 540 T+W+GDL+ WMD ++ + E V +KV+R++ S Y FV+F S A+AE+AL Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145 Query: 541 QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASD--HSIFVGDLAVDVTDDMLMELFANK 714 + ++P FKLNWA+ + + ++ D SIFVGDL D L F + Sbjct: 146 MKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSI 205 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTS 894 Y S AK+I+D TG SR YGFVRF + ++ HA+ M G C RP+RI A+P+ + Sbjct: 206 YPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSRA 265 Query: 895 G---DS--GTSPTTQSDG---------DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVAS 1032 DS G PT+ S+ D N TV+VGGL N+SE +L+ F +G + + Sbjct: 266 SIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRILN 325 Query: 1033 VKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRS--PASKQSRGDS 1194 +KIP GK CGFVQ+ ++ AE+A+ + G+ +G +RL+WG + P S S+ S Sbjct: 326 IKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHNTLPVSALSQSQS 381 Score = 43.5 bits (101), Expect = 0.003 Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 10/201 (4%) Frame = +1 Query: 361 NRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 N T++VG L + E L CF P G ++ IK+ +G GFV++ ++AEKA+ Sbjct: 296 NTTVFVGGLASNLSEKDLQVCFQPFGRILNIKI------PFGKGCGFVQYSEKSAAEKAI 349 Query: 541 QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYR 720 G ++ + +L W ++ S L+ S V D D T L AN+ Sbjct: 350 NTMQGALVGTSH--IRLAWGHNTL--PVSALSQSQS-QVSDEGFDRT------LSANQIF 398 Query: 721 SVKGAKVIIDANTGRSRGYG-FVRFGDDIDRTHA---------MTEMNGMYCSTRPIRIG 870 + + +I AN+G S G ++ RT A ++ +NGM + Sbjct: 399 GMN--QSVIGANSGSSNSSGSSLKSAPVSPRTAAAQSLLPNSVVSSINGM----NSVNFS 452 Query: 871 PATPRRTSGDSGTSPTTQSDG 933 +P S + SPT G Sbjct: 453 TISPPPLSRSASISPTLSGSG 473
>Q00539:NAM8_YEAST Protein NAM8 - Saccharomyces cerevisiae (Baker's yeast)| Length = 523 Score = 166 bits (420), Expect = 3e-40 Identities = 111/331 (33%), Positives = 167/331 (50%), Gaps = 66/331 (19%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEV-VTIKVIRNR--HSGV--------SEGYGFVEFYS 516 +++GDL D+N + + GE + ++++ N ++G ++GY FV+F S Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115 Query: 517 HASAEKALQNFAGHVMPN-TDRAFKLNWASYSVGEKRSEL-----ASDHSIFVGDLAVDV 678 A AL G ++PN ++ KLNWA+ S + L ++ SIFVGDLA +V Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174 Query: 679 TDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRP 858 T+ L ELF N+Y S AK++ D TG S+GYGFV+F + ++ A++EM G++ + R Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234 Query: 859 IRIGPATPRR--------------------------TSGDSGTS---------------- 912 I++GP + ++ + G S S Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294 Query: 913 -------PTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQ 1071 P+ D N TV++GGL V+EDELR F +G + VKIPVGK CGFVQ Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQ 354 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 +++R AE A+ G+ G I VRLSWGRS Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385 Score = 47.0 bits (110), Expect = 2e-04 Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 10/155 (6%) Frame = +1 Query: 766 SRGYGFVRFGDDIDRTHAMTEMNGMYCSTRP---IRIGPATPRRTSGDSGTSPTTQSDGD 936 ++GY FV F +A+ + NGM P +++ AT S S ++ + + Sbjct: 105 NQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWAT----SSYSNSNNSLNNVKS 159 Query: 937 STNRTVYVGGLDPNVSEDELRKTFA-KYGDVASVKI------PVGKQCGFVQFINRADAE 1095 N +++VG L PNV+E +L + F +Y + KI + K GFV+F N + + Sbjct: 160 GNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQ 219 Query: 1096 EALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGH 1200 AL + G + +A+++ P S Q + SG+ Sbjct: 220 LALSEMQGVFLNGRAIKV----GPTSGQQQHVSGN 250 Score = 38.5 bits (88), Expect = 0.082 Identities = 23/79 (29%), Positives = 39/79 (49%) Frame = +1 Query: 361 NRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 N T+++G L + E+ L + F P G +V +K+ V + GFV++ SAE A+ Sbjct: 312 NTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKI------PVGKCCGFVQYVDRLSAEAAI 365 Query: 541 QNFAGHVMPNTDRAFKLNW 597 G P + +L+W Sbjct: 366 AGMQG--FPIANSRVRLSW 382
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 126 bits (316), Expect = 3e-28 Identities = 80/274 (29%), Positives = 138/274 (50%), Gaps = 8/274 (2%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT++VG+L + E + F G + K+I S ++ Y FVEFY H A AL Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALA 66 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 G + + K+NWA+ +K+ + ++ +FVGDL+ ++T + + FA + Sbjct: 67 AMNGRKI--LGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFA-PFGK 122 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDS 903 + A+V+ D TG+S+GYGFV F + +D +A+ M G + R IR AT + + S Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182 Query: 904 GTSPTTQ--------SDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC 1059 T+ + N TVY GG+ +++ +R+TF+ +G + +++ K Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242 Query: 1060 GFVQFINRADAEEALQGLSGSTIGKQAVRLSWGR 1161 FV+F A A+ ++G+TI V+ WG+ Sbjct: 243 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 276 Score = 45.8 bits (107), Expect = 5e-04 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Frame = +1 Query: 928 DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG----FVQFINRADAE 1095 + D RT+YVG L +V+E + + F++ G S K+ FV+F DA Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62 Query: 1096 EALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGH 1200 AL ++G I + V+++W +P+S Q + S H Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSS-QKKDTSNH 96
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 121 bits (303), Expect = 1e-26 Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 23/289 (7%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVI------RNRHSGV---------SEGYG 498 RT++VG+L + E + F G + K+I R +S V ++ Y Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68 Query: 499 FVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDV 678 FVEFY H A AL G + + K+NWA+ +K+ + ++ +FVGDL+ ++ Sbjct: 69 FVEFYEHRDAAAALAAMNGRKI--LGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 125 Query: 679 TDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRP 858 T + + FA + + A+V+ D TG+S+GYGFV F + +D +A+ M G + R Sbjct: 126 TTEDIKSAFA-PFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184 Query: 859 IRIGPATPRRTSGDSGTSPTTQ--------SDGDSTNRTVYVGGLDPNVSEDELRKTFAK 1014 IR AT + + S T+ + N TVY GG+ +++ +R+TF+ Sbjct: 185 IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 244 Query: 1015 YGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGR 1161 +G + +++ K FV+F A A+ ++G+TI V+ WG+ Sbjct: 245 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 293 Score = 40.8 bits (94), Expect = 0.016 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 21/112 (18%) Frame = +1 Query: 928 DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI--------PVGKQCGF------ 1065 + D RT+YVG L +V+E + + F++ G S K+ V GF Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62 Query: 1066 -------VQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGH 1200 V+F DA AL ++G I + V+++W +P+S Q + S H Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSS-QKKDTSNH 113
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 120 bits (302), Expect = 1e-26 Identities = 82/284 (28%), Positives = 140/284 (49%), Gaps = 18/284 (6%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 +T++VG+L + E + F G K+I + + ++ Y FVEF+ H A AL Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELAS---------DH-SIFVGDLAVDVTDDML 693 G + + K+NWA+ +K+ +S DH +FVGDL+ ++T + + Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122 Query: 694 MELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGP 873 FA + + A+V+ D TG+S+GYGFV F + D +A+ +M G + R IR Sbjct: 123 KAAFA-PFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181 Query: 874 ATPRRTSGDSGTSPTTQ--------SDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVA 1029 AT + + S T+ S N TVY GG+ ++E +R+TF+ +G + Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241 Query: 1030 SVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGR 1161 +++ K FV+F + A A+ ++G+TI V+ WG+ Sbjct: 242 EIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285 Score = 39.3 bits (90), Expect = 0.048 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Frame = +1 Query: 934 DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG----FVQFINRADAEEA 1101 D +T+YVG L +V+E + + F++ G + K+ + FV+F A A Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62 Query: 1102 LQGLSGSTIGKQAVRLSWGRSPASKQ 1179 L ++G I + V+++W +P+S++ Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQK 88
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 117 bits (292), Expect = 2e-25 Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 18/284 (6%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 +T++VG+L + E + F G K+I + + ++ Y FVEF+ H A AL Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASD----------HSIFVGDLAVDVTDDML 693 G + + K+NWA+ +K+ +S +FVGDL+ +T + + Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDI 122 Query: 694 MELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGP 873 FA + + A+V+ D TG+S+GYGFV F + D +A+ +M G + R IR Sbjct: 123 KAAFA-PFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181 Query: 874 ATPRRTSGDSGTSPTTQ--------SDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVA 1029 AT + + S T+ + +N TVY GG+ ++E +R+TF+ +G + Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241 Query: 1030 SVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGR 1161 +++ K FV+F + A A+ ++G+TI V+ WG+ Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285 Score = 39.3 bits (90), Expect = 0.048 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Frame = +1 Query: 934 DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG----FVQFINRADAEEA 1101 D +T+YVG L +V+E + + F++ G + K+ + FV+F A A Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62 Query: 1102 LQGLSGSTIGKQAVRLSWGRSPASKQ 1179 L ++G I + V+++W +P+S++ Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQK 88
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 108 bits (271), Expect = 5e-23 Identities = 73/258 (28%), Positives = 136/258 (52%), Gaps = 5/258 (1%) Frame = +1 Query: 361 NRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 N +++VGDL + + ++ L FG G VVT++V R+ + S GYG+V F + A +A+ Sbjct: 35 NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAI 94 Query: 541 QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYR 720 Q + +P + ++ ++ +RS +IF+ +L + L + F++ + Sbjct: 95 QEL--NYIPLYGKPIRVMYSHRDPSVRRSGAG---NIFIKNLDESIDHKALHDTFSS-FG 148 Query: 721 SVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGD 900 ++ KV +D ++G+S+GYGFV++ ++ A+ ++NGM + + + +GP RR D Sbjct: 149 NIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFL-RRQERD 206 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGF 1065 S + T ++ VYV L + ++D+L+ F +YG + S + K GF Sbjct: 207 STANKTKFTN-------VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGF 259 Query: 1066 VQFINRADAEEALQGLSG 1119 V F N DA A++ L+G Sbjct: 260 VNFENADDAARAVESLNG 277 Score = 102 bits (255), Expect = 4e-21 Identities = 78/262 (29%), Positives = 130/262 (49%), Gaps = 9/262 (3%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L +D LH F G +V+ KV + SG S+GYGFV++ + SA+KA++ Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKL 184 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 G ++ N + + + + + +++V +LA TDD L F +Y + Sbjct: 185 NGMLL-NDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFG-EYGKIT 242 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA---TPRRTSGD 900 A V+ D G+S+G+GFV F + D A+ +NG + +G A + R T Sbjct: 243 SAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELR 301 Query: 901 SGTSPTTQSDGDS-TNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI---PVG--KQCG 1062 + D + +YV LDP++S+++L++ F+ +G V S K+ P G K G Sbjct: 302 VRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSG 361 Query: 1063 FVQFINRADAEEALQGLSGSTI 1128 FV F +A EA+ LSG I Sbjct: 362 FVAFATPEEATEAMSQLSGKMI 383 Score = 64.3 bits (155), Expect = 1e-09 Identities = 44/180 (24%), Positives = 93/180 (51%), Gaps = 11/180 (6%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++V +L ++ L + FG G++ + V+++ G S+G+GFV F + A +A+++ Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESL 275 Query: 550 AGH-----------VMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLM 696 GH ++R +L ++ ++ +++V +L ++D+ L Sbjct: 276 NGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLK 335 Query: 697 ELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 E+F+ + +V +KV+ D N G S+G GFV F + T AM++++G ++P+ + A Sbjct: 336 EIFS-PFGTVTSSKVMRDPN-GTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIA 393
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 108 bits (269), Expect = 8e-23 Identities = 75/263 (28%), Positives = 133/263 (50%), Gaps = 10/263 (3%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L +D L+ F G +++ KV+ + H S GYGFV F +H +A +A+Q Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKR--SELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 G ++ N + F ++ S E +++ ++++ + D+ D L E+F+ + + Sbjct: 159 NGMLL-NDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFS-AFGN 216 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDS 903 KV++D ++GRSRG+GFV +G+ + A++EMNG + R I +G A R Sbjct: 217 TLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSE 275 Query: 904 GTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GKQC 1059 Q + NR +YV LD + +D LRK F YG + S K+ K Sbjct: 276 LKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEGGHSKGF 335 Query: 1060 GFVQFINRADAEEALQGLSGSTI 1128 GFV F + +A +A+ ++G + Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIV 358 Score = 93.2 bits (230), Expect = 3e-18 Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 6/278 (2%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 ++++GDL + E L+ F P+G +++I+V R+ + S Y ++ F A AE+AL Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ R ++ W+ G ++S + ++F+ +L + + L + F + + ++ Sbjct: 72 MNFEVIKG--RPIRIMWSQRDPGLRKSGVG---NVFIKNLDESIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG-DS 903 KV+ D + SRGYGFV F A+ MNGM + R + +G RR + Sbjct: 126 LSCKVVCDEH--GSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEY 183 Query: 904 GTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFV 1068 G + TN VY+ ++ + LR+ F+ +G+ SVK+ + + GFV Sbjct: 184 GAKVM-----EFTN--VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFV 236 Query: 1069 QFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 + N +A++A+ ++G + + + + + +QS Sbjct: 237 NYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQS 274 Score = 75.9 bits (185), Expect = 5e-13 Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 11/171 (6%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN---------- 546 MD+ L F G +++KV+ + SG S G+GFV + +H A+KA+ Sbjct: 202 MDDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRM 260 Query: 547 -FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 + G +R +L + ++R +++V +L + DD L + F Y + Sbjct: 261 IYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFL-PYGT 319 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 + AKV+ + G S+G+GFV F + T A+TEMNG ST+P+ + A Sbjct: 320 ITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 629 Score = 107 bits (266), Expect = 2e-22 Identities = 75/263 (28%), Positives = 133/263 (50%), Gaps = 10/263 (3%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L +D L+ F G +++ KV+ + H S GYGFV F + +A +A+Q Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKR--SELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 G ++ N + F ++ S E +++ ++++ + D+ D L E+F+ + + Sbjct: 159 NGMLL-NDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFS-AFGN 216 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDS 903 KV++D +TGRSRG+GFV +G+ + A++EMNG + R I +G A R Sbjct: 217 TLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGE 275 Query: 904 GTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GKQC 1059 Q + NR +YV LD + +D LRK F+ YG + S K+ K Sbjct: 276 LKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGGHSKGF 335 Query: 1060 GFVQFINRADAEEALQGLSGSTI 1128 GFV F + +A +A+ ++G + Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIV 358 Score = 95.1 bits (235), Expect = 7e-19 Identities = 72/281 (25%), Positives = 139/281 (49%), Gaps = 6/281 (2%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G +++I+V R+ + S GY ++ F A AE+AL Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ R ++ W+ G ++S + ++F+ +L + + L + F + + ++ Sbjct: 72 MNFEVIKG--RPIRIMWSQRDPGLRKSGVG---NVFIKNLDESIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG-DS 903 KV+ D + SRGYGFV F A+ MNGM + R + +G RR + Sbjct: 126 LSCKVVCDEH--GSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEY 183 Query: 904 GTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFV 1068 G + TN VY+ ++ + LR+ F+ +G+ SVK+ + + GFV Sbjct: 184 GAKVM-----EFTN--VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFV 236 Query: 1069 QFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGD 1191 + N +A++A+ ++G + + + + GR+ + +G+ Sbjct: 237 NYGNHEEAQKAVSEMNGKEVNGRMIYV--GRAQKRIERQGE 275 Score = 75.1 bits (183), Expect = 8e-13 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 11/171 (6%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN---------- 546 MD+ L F G +++KV+ + +G S G+GFV + +H A+KA+ Sbjct: 202 MDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRM 260 Query: 547 -FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 + G +R +L + ++R +++V +L + DD L + F+ Y + Sbjct: 261 IYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFS-PYGT 319 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 + AKV+ + G S+G+GFV F + T A+TEMNG ST+P+ + A Sbjct: 320 ITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 106 bits (265), Expect = 2e-22 Identities = 74/263 (28%), Positives = 134/263 (50%), Gaps = 10/263 (3%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L +D L+ F G++++ KV+ + + S GYGFV F + +A +A+Q Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKR--SELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 G ++ N + F ++ S E +++ ++++ + D+ D L E+F+ + + Sbjct: 159 NGMLL-NDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFS-AFGN 216 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDS 903 KV++D N+GRSRG+GFV +G+ + A+TEMNG + R + +G A R Sbjct: 217 TLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGE 275 Query: 904 GTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GKQC 1059 Q + NR +YV LD + +D LRK F+ YG + S K+ K Sbjct: 276 LKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEGGHSKGF 335 Query: 1060 GFVQFINRADAEEALQGLSGSTI 1128 GFV F + +A +A+ ++G + Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIV 358 Score = 91.7 bits (226), Expect = 8e-18 Identities = 71/281 (25%), Positives = 137/281 (48%), Gaps = 6/281 (2%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 ++++GDL + E L+ F P+G +++I+V R+ + S GY ++ F A AE+AL Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ R ++ W+ G ++S + ++F+ +L + + L + F + + + Sbjct: 72 MNFEVIKG--RPIRIMWSQRDPGLRKSGVG---NVFIKNLDDSIDNKALYDTF-SAFGDI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG-DS 903 KV+ D SRGYGFV F A+ MNGM + R + +G RR + Sbjct: 126 LSCKVVCDEY--GSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEY 183 Query: 904 GTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFV 1068 G + TN VY+ ++ + L++ F+ +G+ SVK+ + + GFV Sbjct: 184 GAKVM-----EFTN--VYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFV 236 Query: 1069 QFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGD 1191 + N +A++A+ ++G + + V + GR+ + +G+ Sbjct: 237 NYGNHEEAQKAVTEMNGKEVNGRMVYV--GRAQKRIERQGE 275 Score = 74.7 bits (182), Expect = 1e-12 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 11/171 (6%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN---------- 546 MD+ L F G +++KV+ + +SG S G+GFV + +H A+KA+ Sbjct: 202 MDDKRLKEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRM 260 Query: 547 -FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 + G +R +L + ++R +++V +L + DD L + F+ Y + Sbjct: 261 VYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFS-PYGT 319 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 + KV+ + G S+G+GFV F + T A+TEMNG ST+P+ + A Sbjct: 320 ITSTKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 104 bits (259), Expect = 1e-21 Identities = 73/280 (26%), Positives = 144/280 (51%), Gaps = 7/280 (2%) Frame = +1 Query: 361 NRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 N +++VGDL ++E++L F V ++V R+ + S GY +V F + A +A+ Sbjct: 44 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAM 102 Query: 541 QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYR 720 ++ + P DR ++ S + + L+ ++F+ +L + + L E F++ + Sbjct: 103 ESL--NYAPIRDRPIRI---MLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSS-FG 156 Query: 721 SVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPR--RTS 894 ++ KV +D GRS+GYGFV+F + A+ ++NGM + + + +G R R Sbjct: 157 TILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRAR 215 Query: 895 GDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQC 1059 +SG P+ + VYV L +++DEL+KTF KYGD++S + + Sbjct: 216 SESGAVPSFTN--------VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSF 267 Query: 1060 GFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQ 1179 GFV F++ A A++ ++G ++G+ + + + + ++ Sbjct: 268 GFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDRE 307 Score = 92.4 bits (228), Expect = 5e-18 Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 24/295 (8%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL--- 540 +++ +L +D L+ F G +++ KV + G S+GYGFV+F +A+ A+ Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKL 192 Query: 541 --------QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLM 696 Q F GH + DRA + A + S +++V +L ++TDD L Sbjct: 193 NGMLLNDKQVFVGHFVRRQDRARSESGA----------VPSFTNVYVKNLPKEITDDELK 242 Query: 697 ELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 + F KY + A V+ D +G SR +GFV F A+ +MNG+ + +G A Sbjct: 243 KTFG-KYGDISSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRA 300 Query: 877 TP--------RRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVAS 1032 RR S + G + +Y+ LD +V++++L++ F++YG+V S Sbjct: 301 QKKSDREEELRRKFEQERISRFEKLQGSN----LYLKNLDDSVNDEKLKEMFSEYGNVTS 356 Query: 1033 VKIPVGKQ-----CGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 K+ + Q GFV + N +A A++ ++G IG++ + ++ + +Q+ Sbjct: 357 CKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQA 411
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 100 bits (250), Expect = 1e-20 Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 12/266 (4%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L+ +D L+ F G +++ KV + H S G+GFV F +H +A++A+ Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINTM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDMLMELFANKY 717 G ++ N + F ++ S E+ +EL + +I+V +L VDV + L +LF+ ++ Sbjct: 159 NGMLL-NDRKVFVGHFKSRR--EREAELGARALEFTNIYVKNLPVDVDEQGLQDLFS-QF 214 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 + KV+ D N+G SR +GFV F + A+ MNG S R + G A R Sbjct: 215 GKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQ 273 Query: 898 DSGTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GK 1053 + Q D R +YV LD ++ +D+LRK F+ YG + S K+ K Sbjct: 274 NELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSK 333 Query: 1054 QCGFVQFINRADAEEALQGLSGSTIG 1131 GFV F + +A +A+ ++G +G Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVG 359 Score = 88.2 bits (217), Expect = 9e-17 Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 6/260 (2%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G +++I+V R+ + S GY ++ F A AE+AL Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 ++ + ++ W+ G ++S + +IF+ +L + + L + F+ + ++ Sbjct: 72 MNFEMLKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNLEDSIDNKALYDTFST-FGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR-TSGDS 903 KV D + SRG+GFV F A+ MNGM + R + +G RR + Sbjct: 126 LSCKVACDEH--GSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183 Query: 904 GTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI----PVGKQC-GFV 1068 G + TN +YV L +V E L+ F+++G + SVK+ +C GFV Sbjct: 184 GARAL-----EFTN--IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFV 236 Query: 1069 QFINRADAEEALQGLSGSTI 1128 F +A++A+ ++G + Sbjct: 237 NFEKHEEAQKAVVHMNGKEV 256 Score = 77.8 bits (190), Expect = 1e-13 Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 11/184 (5%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E I+V +L +DE L F G+++++KV+R+ +SG S +GFV F H A+KA Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247 Query: 538 LQN-----------FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTD 684 + + +AG +R +L + + R +++V +L + D Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307 Query: 685 DMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIR 864 D L + F+ Y + AKV+ + G S+G+GFV F + T A+TEMNG T+P+ Sbjct: 308 DKLRKEFS-PYGVITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 364 Query: 865 IGPA 876 + A Sbjct: 365 VALA 368 Score = 40.8 bits (94), Expect = 0.016 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 7/85 (8%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKI----PVGKQCGF--VQFINRADAEEALQG 1110 ++YVG L P+V+E L + F+ G + S+++ + G+ + F ADAE AL Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71 Query: 1111 LSGSTIGKQAVRLSWG-RSPASKQS 1182 ++ + Q +R+ W R P ++S Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKS 96
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 100 bits (250), Expect = 1e-20 Identities = 83/287 (28%), Positives = 146/287 (50%), Gaps = 5/287 (1%) Frame = +1 Query: 361 NRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 N +++ GDL + E +L F VV+++V R+++ S GY ++ F + A +A+ Sbjct: 48 NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRR-SLGYAYINFSNPNDAYRAM 106 Query: 541 QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYR 720 + A + P DR ++ S + + L+ +IF+ +L + + L E F++ + Sbjct: 107 E--ALNYTPLFDRPIRI---MLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSS-FG 160 Query: 721 SVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGD 900 ++ KV +D TGRS+GYGFV+F + A+ ++NGM + + + +G R+ Sbjct: 161 TILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERAR 219 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI----PVGKQC-GF 1065 +PT + TN VYV L + EDELRKTF K+G ++S + +C GF Sbjct: 220 DENTPTPR----FTN--VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGF 273 Query: 1066 VQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHRR 1206 V F A A++ ++G ++G + + GR A K+S + RR Sbjct: 274 VNFECTEAAASAVEKMNGISLGDDVLYV--GR--AQKKSEREEELRR 316 Score = 85.9 bits (211), Expect = 4e-16 Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 17/278 (6%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L +D L F G +++ KV + +G S+GYGFV+F SA+ A+ Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKL 196 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHS--------IFVGDLAVDVTDDMLMELF 705 G +M N + F ++ +R E A D + ++V +L ++ +D L + F Sbjct: 197 NGMLM-NDKQVFVGHFI------RRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTF 249 Query: 706 ANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPR 885 K+ + A V+ D +G SR +GFV F A+ +MNG+ + +G A + Sbjct: 250 G-KFGVISSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKK 307 Query: 886 RTSGDSGTSPTTQSDGD----STNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGK 1053 + Q + S +Y+ LD +V +++L++ F++YG+V S K+ + Sbjct: 308 SEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNP 367 Query: 1054 Q-----CGFVQFINRADAEEALQGLSGSTIGKQAVRLS 1152 Q GFV + N +A AL ++G IG++ + ++ Sbjct: 368 QGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIA 405 Score = 64.3 bits (155), Expect = 1e-09 Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 11/180 (6%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN- 546 ++V +L + E+ L FG G + + V+R++ SG S +GFV F +A A++ Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEKM 289 Query: 547 ----------FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLM 696 + G ++R +L R E + ++++ +L V D+ L Sbjct: 290 NGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLK 349 Query: 697 ELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 E+F+ +Y +V +KV+++ G SRG+GFV + + + A++EMNG +P+ I A Sbjct: 350 EMFS-EYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407 Score = 40.0 bits (92), Expect = 0.028 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Frame = +1 Query: 910 SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQ-----CGFVQF 1074 SP +D N ++Y G LDP V+E L F +V SV++ + ++ F Sbjct: 37 SPVVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINF 96 Query: 1075 INRADAEEALQGLSGSTIGKQAVRLSW-GRSPASKQS 1182 N DA A++ L+ + + + +R+ R P+++ S Sbjct: 97 SNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLS 133
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 99.8 bits (247), Expect = 3e-20 Identities = 71/207 (34%), Positives = 101/207 (48%), Gaps = 11/207 (5%) Frame = +1 Query: 616 EKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFG 795 +K E +IFVG L+ + D+ L + F + V GA+VI + T RSRGYG+V F Sbjct: 159 QKNEETEEPATIFVGRLSWSIDDEWLKKEFEH-IGGVIGARVIYERGTDRSRGYGYVDFE 217 Query: 796 DDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDS-----GTSPTTQSDGDSTNRTVYV 960 + A+ EM G RPI +T + + G +P+ SD T+++ Sbjct: 218 NKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSD------TLFL 271 Query: 961 GGLDPNVSEDELRKTFAKYGDVASVKIPV------GKQCGFVQFINRADAEEALQGLSGS 1122 G L N D + + FAK+G+V SV+IP K G+VQF N DA++AL L G Sbjct: 272 GNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGE 331 Query: 1123 TIGKQAVRLSWGRSPASKQSRGDSGHR 1203 I + VRL + SP G G R Sbjct: 332 YIDNRPVRLDFS-SPRPNNDGGRGGSR 357 Score = 85.9 bits (211), Expect = 4e-16 Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 6/183 (3%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 +E TI+VG L + +D+ +L F G V+ +VI R + S GYG+V+F + + AEK Sbjct: 165 EEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEK 224 Query: 535 ALQNFAGHVMP----NTDRAFKLNWASYSVGEKRSELASDHS--IFVGDLAVDVTDDMLM 696 A+Q G + N D + + +K + S+ S +F+G+L+ + D + Sbjct: 225 AIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIF 284 Query: 697 ELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 ELFA K+ V ++ T + +G+G+V+F + D A+ + G Y RP+R+ + Sbjct: 285 ELFA-KHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFS 343 Query: 877 TPR 885 +PR Sbjct: 344 SPR 346
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 99.4 bits (246), Expect = 4e-20 Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 5/277 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G +++I+V R+ + S GY +V F A AE+AL Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ R ++ W+ ++S + +IF+ +L + + L + F + + ++ Sbjct: 72 MNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV+ D N S+GYGFV F A+ +MNGM + R + +G R S Sbjct: 126 LSCKVVCDEN--GSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVG----RFKSRKER 179 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFVQ 1071 + + TN VY+ +++++ L++ F KYG SVK+ K GFV Sbjct: 180 EAELGARAKEFTN--VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVS 237 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 F DA++A+ ++G + +++ + + +Q+ Sbjct: 238 FERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQT 274 Score = 97.4 bits (241), Expect = 1e-19 Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 12/283 (4%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L +D L+ F G +++ KV+ + + S+GYGFV F + +AE+A+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDMLMELFANKY 717 G ++ N + F + S E+ +EL + ++++ + D+ D+ L E+F KY Sbjct: 159 NGMLL-NDRKVFVGRFKSRK--EREAELGARAKEFTNVYIKNFGDDMNDERLKEMFG-KY 214 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 KV+ D N G+S+G+GFV F D A+ EMNG + + + +G A + Sbjct: 215 GPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQ 273 Query: 898 DSGTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GK 1053 Q D R +YV LD + ++ LRK F +G + S K+ + K Sbjct: 274 TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGGRSK 333 Query: 1054 QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 GFV F + +A +A+ ++G + + + ++ + +Q+ Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 99.4 bits (246), Expect = 4e-20 Identities = 74/283 (26%), Positives = 139/283 (49%), Gaps = 12/283 (4%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L +D L+ F G +++ KV+ + + S+GYGFV F + +AE+A++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDMLMELFANKY 717 G ++ N + F + S E+ +EL + ++++ + D+ D+ L ELF K+ Sbjct: 159 NGMLL-NDRKVFVGRFKSQK--EREAELGARAKEFTNVYIKNFGEDMDDERLKELFG-KF 214 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 KV+ D +G+S+G+GFV F D A+ EMNG + + I +G A + Sbjct: 215 GPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 273 Query: 898 DSGTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GK 1053 Q D R +YV LD + ++ LRK F+ +G + S K+ + K Sbjct: 274 TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK 333 Query: 1054 QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 GFV F + +A +A+ ++G + + + ++ + +Q+ Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376 Score = 96.3 bits (238), Expect = 3e-19 Identities = 71/277 (25%), Positives = 133/277 (48%), Gaps = 5/277 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G +++I+V R+ + S GY +V F A AE+AL Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ + ++ W+ ++S + +IF+ +L + + L + F + + ++ Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV+ D N S+GYGFV F A+ +MNGM + R + +G R S Sbjct: 126 LSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG----RFKSQKER 179 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFVQ 1071 + + TN VY+ ++ ++ L++ F K+G SVK+ K GFV Sbjct: 180 EAELGARAKEFTN--VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVS 237 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 F DA++A+ ++G + + + + + +Q+ Sbjct: 238 FERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 99.0 bits (245), Expect = 5e-20 Identities = 66/263 (25%), Positives = 131/263 (49%), Gaps = 5/263 (1%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 + + +++VGDL+ + E +L+ F P G V +I+V R+ + S GY +V F H + K Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 A++ + P R ++ W+ ++ +IF+ +L D+ + L + F + Sbjct: 95 AIEQL--NYTPIKGRLCRIMWSQRDPSLRKK---GSGNIFIKNLHPDIDNKALYDTF-SV 148 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTS 894 + + +K+ D N G+S+G+GFV F ++ A+ +NGM + + I + P R+ Sbjct: 149 FGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRK-- 205 Query: 895 GDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVG-----KQC 1059 S ++ TN +YV ++ ++++ ++ FAK+G + S + K Sbjct: 206 --ERDSQLEETKAHYTN--LYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGF 261 Query: 1060 GFVQFINRADAEEALQGLSGSTI 1128 GFV + DA +A++ L+ S + Sbjct: 262 GFVNYEKHEDAVKAVEALNDSEL 284 Score = 54.7 bits (130), Expect = 1e-06 Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 13/182 (7%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN- 546 ++V ++ + F G +V+ + ++ G +G+GFV + H A KA++ Sbjct: 221 LYVKNINSETTDEQFQELFAKFGPIVSASLEKDA-DGKLKGFGFVNYEKHEDAVKAVEAL 279 Query: 547 ----------FAGHVMPNTDR--AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDM 690 + G +R K + +Y + EK ++ + +FV +L V D+ Sbjct: 280 NDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRL-EKMAKYQGVN-LFVKNLDDSVDDEK 337 Query: 691 LMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIG 870 L E FA Y ++ AKV+ N G+S+G+GFV F + T A+TE N + +P+ + Sbjct: 338 LEEEFA-PYGTITSAKVMRTEN-GKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395 Query: 871 PA 876 A Sbjct: 396 IA 397 Score = 40.4 bits (93), Expect = 0.021 Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 6/91 (6%) Frame = +1 Query: 934 DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI------PVGKQCGFVQFINRADAE 1095 ++++ ++YVG L+P+VSE L F+ G V+S+++ +V F + Sbjct: 34 ENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGR 93 Query: 1096 EALQGLSGSTIGKQAVRLSWGRSPASKQSRG 1188 +A++ L+ + I + R+ W + S + +G Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKG 124
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 99.0 bits (245), Expect = 5e-20 Identities = 74/283 (26%), Positives = 139/283 (49%), Gaps = 12/283 (4%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L +D L+ F G +++ KV+ + + S+GYGFV F + +AE+A++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDMLMELFANKY 717 G ++ N + F + S E+ +EL + ++++ + D+ D+ L ELF K+ Sbjct: 159 NGMLL-NDRKVFVGRFKSRK--EREAELGARAKEFTNVYIKNFGEDMDDERLKELFG-KF 214 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 KV+ D +G+S+G+GFV F D A+ EMNG + + I +G A + Sbjct: 215 GPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 273 Query: 898 DSGTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GK 1053 Q D R +YV LD + ++ LRK F+ +G + S K+ + K Sbjct: 274 TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK 333 Query: 1054 QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 GFV F + +A +A+ ++G + + + ++ + +Q+ Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376 Score = 96.3 bits (238), Expect = 3e-19 Identities = 71/277 (25%), Positives = 133/277 (48%), Gaps = 5/277 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G +++I+V R+ + S GY +V F A AE+AL Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ + ++ W+ ++S + +IF+ +L + + L + F + + ++ Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV+ D N S+GYGFV F A+ +MNGM + R + +G R S Sbjct: 126 LSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG----RFKSRKER 179 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFVQ 1071 + + TN VY+ ++ ++ L++ F K+G SVK+ K GFV Sbjct: 180 EAELGARAKEFTN--VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVS 237 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 F DA++A+ ++G + + + + + +Q+ Sbjct: 238 FERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 97.8 bits (242), Expect = 1e-19 Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 12/283 (4%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L +D L+ F G +++ KV+ + + S+GYGFV F + +AE+A++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDMLMELFANKY 717 G ++ N + F + S E+ +EL + ++++ + D+ D+ L +LF K+ Sbjct: 159 NGMLL-NDRKVFVGRFKSRK--EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFG-KF 214 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 KV+ D +G+S+G+GFV F D A+ EMNG + + I +G A + Sbjct: 215 GPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 273 Query: 898 DSGTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GK 1053 Q D R +YV LD + ++ LRK F+ +G + S K+ + K Sbjct: 274 TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK 333 Query: 1054 QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 GFV F + +A +A+ ++G + + + ++ + +Q+ Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376 Score = 94.7 bits (234), Expect = 1e-18 Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 5/277 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL E L+ F P+G +++I+V R+ + S GY +V F A AE+AL Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ + ++ W+ ++S + +IF+ +L + + L + F + + ++ Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV+ D N S+GYGFV F A+ +MNGM + R + +G R S Sbjct: 126 LSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG----RFKSRKER 179 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFVQ 1071 + + TN VY+ ++ ++ L+ F K+G SVK+ K GFV Sbjct: 180 EAELGARAKEFTN--VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVS 237 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 F DA++A+ ++G + + + + + +Q+ Sbjct: 238 FERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 97.8 bits (242), Expect = 1e-19 Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 12/283 (4%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L +D L+ F G +++ KV+ + + S+GYGFV F + +AE+A++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDMLMELFANKY 717 G ++ N + F + S E+ +EL + ++++ + D+ D+ L +LF K+ Sbjct: 159 NGMLL-NDRKVFVGRFKSRK--EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFG-KF 214 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 KV+ D +G+S+G+GFV F D A+ EMNG + + I +G A + Sbjct: 215 GPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 273 Query: 898 DSGTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GK 1053 Q D R +YV LD + ++ LRK F+ +G + S K+ + K Sbjct: 274 TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK 333 Query: 1054 QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 GFV F + +A +A+ ++G + + + ++ + +Q+ Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376 Score = 95.5 bits (236), Expect = 6e-19 Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 5/277 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G +++I+V R+ + S GY +V F A AE+AL Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ + ++ W+ ++S + +IF+ +L + + L + F + + ++ Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV+ D N S+GYGFV F A+ +MNGM + R + +G R S Sbjct: 126 LSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG----RFKSRKER 179 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFVQ 1071 + + TN VY+ ++ ++ L+ F K+G SVK+ K GFV Sbjct: 180 EAELGARAKEFTN--VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVS 237 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 F DA++A+ ++G + + + + + +Q+ Sbjct: 238 FERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 97.8 bits (242), Expect = 1e-19 Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 12/283 (4%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L +D L+ F G +++ KV+ + + S+GYGFV F + +AE+A++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDMLMELFANKY 717 G ++ N + F + S E+ +EL + ++++ + D+ D+ L +LF K+ Sbjct: 159 NGMLL-NDRKVFVGRFKSRK--EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFG-KF 214 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 KV+ D +G+S+G+GFV F D A+ EMNG + + I +G A + Sbjct: 215 GPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 273 Query: 898 DSGTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GK 1053 Q D R +YV LD + ++ LRK F+ +G + S K+ + K Sbjct: 274 TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSK 333 Query: 1054 QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 GFV F + +A +A+ ++G + + + ++ + +Q+ Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376 Score = 95.5 bits (236), Expect = 6e-19 Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 5/277 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G +++I+V R+ + S GY +V F A AE+AL Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ + ++ W+ ++S + +IF+ +L + + L + F + + ++ Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV+ D N S+GYGFV F A+ +MNGM + R + +G R S Sbjct: 126 LSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG----RFKSRKER 179 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFVQ 1071 + + TN VY+ ++ ++ L+ F K+G SVK+ K GFV Sbjct: 180 EAELGARAKEFTN--VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVS 237 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 F DA++A+ ++G + + + + + +Q+ Sbjct: 238 FERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 96.3 bits (238), Expect = 3e-19 Identities = 71/277 (25%), Positives = 134/277 (48%), Gaps = 5/277 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G +++I+V R+ + S GY +V F A AE+AL Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ + ++ W+ ++S + +IF+ +L + + L + F + + ++ Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV+ D N S+GYGFV F A+ +MNGM + R + +G R S Sbjct: 126 LSCKVVCDEN--GSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVG----RFKSRKER 179 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFVQ 1071 + + TN VY+ ++ ++ L++ F +YG SVK+ + GFV Sbjct: 180 EAELGARAKEFTN--VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVS 237 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 F DA++A+ ++G + +A+ + + +Q+ Sbjct: 238 FERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQT 274 Score = 95.1 bits (235), Expect = 7e-19 Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 12/283 (4%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L +D L+ F G +++ KV+ + + S+GYGFV F + +AE+A+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDMLMELFANKY 717 G ++ N + F + S E+ +EL + ++++ + D+ D+ L E F +Y Sbjct: 159 NGMLL-NDRKVFVGRFKSRK--EREAELGARAKEFTNVYIKNFGEDMDDERLKEWFG-QY 214 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 + KV+ D + G+SRG+GFV F D A+ +MNG + + I +G A + Sbjct: 215 GAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQ 273 Query: 898 DSGTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GK 1053 Q D R +YV LD + ++ LRK F +G + S K+ + K Sbjct: 274 TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEGGRSK 333 Query: 1054 QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 GFV F + +A +A+ ++G + + + ++ + +Q+ Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376
>P32831:NGR1_YEAST Negative growth regulatory protein NGR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 672 Score = 95.5 bits (236), Expect = 6e-19 Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 12/144 (8%) Frame = +1 Query: 490 GYGFVEFYSHASAEKALQ-------NFAG-----HVMPNTDRAFKLNWASYSVGEKRSEL 633 GY FVEF + A+ AL NF P R F+LNWAS + + Sbjct: 129 GYCFVEFETQKDAKFALSLNATPLPNFYSPTTNSQTNPTFKRTFRLNWASGATLQSSIPS 188 Query: 634 ASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRT 813 + S+FVGDL+ T+ L+ LF +++SVK +V+ D TG SR +GFVRFGD+ +R Sbjct: 189 TPEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERR 248 Query: 814 HAMTEMNGMYCSTRPIRIGPATPR 885 A+ EM+G + R +R+ ATPR Sbjct: 249 RALIEMSGKWFQGRALRVAYATPR 272 Score = 92.4 bits (228), Expect = 5e-18 Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 4/280 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVV-TIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 +++VGDL E L S F + V T++V+ + +G S +GFV F +AL Sbjct: 193 SLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALI 252 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 +G RA ++ +A+ ++M+++L + + Sbjct: 253 EMSGKWFQG--RALRVAYAT------------------------PRNNMMLQLQEQQQQQ 286 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHA-MTEMNGMYCSTRPIRI--GPATPRRTS 894 + + + + G ++ +++ + ++ M +N ++ + P+ + G + R + Sbjct: 287 QQLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALH-NAPPMHLNEGGISNMRVN 345 Query: 895 GDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQF 1074 + P+ + D TN TV+VGGL P +E +LR F +G + +V+IP GK CGFV+F Sbjct: 346 D---SLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKF 402 Query: 1075 INRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDS 1194 R DAE ++QGL G +G +RLSWGR P+S ++ +S Sbjct: 403 EKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNS 441 Score = 40.4 bits (93), Expect = 0.021 Identities = 62/277 (22%), Positives = 108/277 (38%), Gaps = 13/277 (4%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+W+GDL DE + + + V +K+IR A+K L Sbjct: 34 RTLWMGDLDPSFDEATIEEIWSKLDKKVIVKLIR--------------------AKKNL- 72 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 ++P + + N S E + ++ TD +L ++ + Sbjct: 73 -----LIPCSSTSSSNNNTSEENAENQQSASNS------------TD----QLDNSQMIN 111 Query: 724 VKGAKVIIDANTG-RSRGYGFVRFGDDIDRTHAM----TEMNGMYCSTRPIRIGPATPRR 888 + G I + T GY FV F D A+ T + Y T + P R Sbjct: 112 INGISFIDPSTTQLHHAGYCFVEFETQKDAKFALSLNATPLPNFYSPTTNSQTNPTFKRT 171 Query: 889 TSGDSGTSPTTQSDGDSTNR-TVYVGGLDPNVSEDELRKTF-AKYGDVASVKIPV----- 1047 + + T QS ST +++VG L P +E +L F ++ V +V++ Sbjct: 172 FRLNWASGATLQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTG 231 Query: 1048 GKQC-GFVQFINRADAEEALQGLSGSTIGKQAVRLSW 1155 +C GFV+F + + AL +SG +A+R+++ Sbjct: 232 SSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAY 268 Score = 32.0 bits (71), Expect = 7.6 Identities = 24/100 (24%), Positives = 41/100 (41%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++FVG L T+ L LF K I++ + GFV+F ID ++ Sbjct: 361 TVFVGGLVPKTTEFQLRSLF-------KPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQ 413 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTN 945 + G PIR+ P ++ + ++ S S+N Sbjct: 414 GLQGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQYMSSN 453
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 94.7 bits (234), Expect = 1e-18 Identities = 72/277 (25%), Positives = 134/277 (48%), Gaps = 5/277 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G V++I+V R+ + S GY +V F A AE+AL Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ + ++ W+ ++S + ++F+ +L + + L + F + + ++ Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTF-SAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV+ D N S+GY FV F A+ +MNGM + R + +G R S Sbjct: 126 LSCKVVCDEN--GSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVG----RFKSRKER 179 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI---PVGKQ--CGFVQ 1071 + + TN VY+ V ++ L++ F+++G SVK+ P GK GFV Sbjct: 180 EAELGAKAKEFTN--VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 + DA +A++ ++G I + + + + +Q+ Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA 274 Score = 75.1 bits (183), Expect = 8e-13 Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 11/184 (5%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E +++ + +D+ L F G+ +++KV+R+ + G S+G+GFV + H A KA Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDANKA 247 Query: 538 LQN-----------FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTD 684 ++ F G +R +L + ++R ++++ +L + D Sbjct: 248 VEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDD 307 Query: 685 DMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIR 864 + L + F+ + S+ AKV+++ GRS+G+GFV F + T A+TEMNG ++P+ Sbjct: 308 EKLRKEFS-PFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLY 364 Query: 865 IGPA 876 + A Sbjct: 365 VALA 368
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 94.4 bits (233), Expect = 1e-18 Identities = 72/283 (25%), Positives = 138/283 (48%), Gaps = 12/283 (4%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I+V +L ++ L+ G +++ V+ + + S+GYGFV F +H +AE+A++ Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKKM 158 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDMLMELFANKY 717 G ++ N + F + S E+ +EL + ++++ + D+ D+ L +LF K+ Sbjct: 159 NGMLL-NGRKVFVGQFKSRK--EREAELGARAKEFPNVYIKNFGEDMDDERLKDLFG-KF 214 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 KV+ D +G+S+G+GFV F D A+ EMNG + + I +G A + Sbjct: 215 GPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 273 Query: 898 DSGTSPTTQSDGDSTNR----TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GK 1053 Q D R +YV LD + ++ LRK F+ +G + S K+ + K Sbjct: 274 TELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSK 333 Query: 1054 QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 GFV F + +A +A+ ++G + + + ++ + +Q+ Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376 Score = 85.5 bits (210), Expect = 6e-16 Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 5/277 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL + E L+ F P+G +++I++ R+ + S Y +V F AE AL Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 V+ + ++ W+ ++S + +IFV +L + + L + + + ++ Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFVKNLDKSINNKALYDT-VSAFGNI 125 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 V+ D N S+GYGFV F A+ +MNGM + R + +G R+ Sbjct: 126 LSCNVVCDEN--GSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAEL 183 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFVQ 1071 + + VY+ ++ ++ L+ F K+G SVK+ K GFV Sbjct: 184 GARAKEFP------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVS 237 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQS 1182 F DA++A+ ++G + + + + + +Q+ Sbjct: 238 FERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 90.1 bits (222), Expect = 2e-17 Identities = 60/181 (33%), Positives = 93/181 (51%) Frame = +1 Query: 361 NRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 +R ++VG+L + E+ L F G + IK++ ++++ + Y FVE++ A AL Sbjct: 74 DRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNK-NVNYAFVEYHQSHDANIAL 132 Query: 541 QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYR 720 Q G + N K+NWA S ++S ++FVGDL V+V D+ L F + + Sbjct: 133 QTLNGKQIENN--IVKINWAFQS---QQSSSDDTFNLFVGDLNVNVDDETLRNAFKD-FP 186 Query: 721 SVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGD 900 S V+ D TG SRGYGFV F D +AM M G + RP+RI A R + + Sbjct: 187 SYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNN 246 Query: 901 S 903 + Sbjct: 247 N 247 Score = 62.8 bits (151), Expect = 4e-09 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 6/197 (3%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 SD ++VG+L +T+D+L + F + K++ID N ++ Y FV + D Sbjct: 73 SDRVLYVGNLDKAITEDILKQYF-QVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANI 130 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A+ +NG ++I A + S S D+ N ++VG L+ NV ++ L Sbjct: 131 ALQTLNGKQIENNIVKINWAFQSQQS----------SSDDTFN--LFVGDLNVNVDDETL 178 Query: 997 RKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLSGSTIGKQAVRLSWG 1158 R F + S + Q G FV F ++ DA+ A+ + G + + +R++W Sbjct: 179 RNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 238 Query: 1159 RSPASKQSRGDSGHRRN 1209 + + + RRN Sbjct: 239 -AKRDNNNNNNYQQRRN 254 Score = 52.8 bits (125), Expect = 4e-06 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 5/91 (5%) Frame = +1 Query: 934 DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGK-----QCGFVQFINRADAEE 1098 ++++R +YVG LD ++ED L++ F G +A++KI + K FV++ DA Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 130 Query: 1099 ALQGLSGSTIGKQAVRLSWGRSPASKQSRGD 1191 ALQ L+G I V+++W S+QS D Sbjct: 131 ALQTLNGKQIENNIVKINWAFQ--SQQSSSD 159 Score = 51.6 bits (122), Expect = 9e-06 Identities = 56/270 (20%), Positives = 105/270 (38%), Gaps = 1/270 (0%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D+ ++VGDL +D+ L + F ++ V+ + +G S GYGFV F S A+ Sbjct: 159 DDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQN 218 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 A+ + G + R ++NWA+ KR +++ + + N Sbjct: 219 AMDSMQGQDL--NGRPLRINWAA-----KRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNN 271 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGP-ATPRRT 891 G + ++ N SRG G I ++ G ++ I + P P+ Sbjct: 272 NNMNMGMNMNMNMNMNNSRGMPPSSMGMPIGAMPLPSQ--GQPQQSQTIGLPPQVNPQAV 329 Query: 892 SGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQ 1071 ++P + T Y+G + +E +L F +G + K K C F++ Sbjct: 330 DHIIRSAPPRVT-------TAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIK 382 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGR 1161 + A + L+ + +R WG+ Sbjct: 383 YDTHEQAAVCIVALANFPFQGRNLRTGWGK 412
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 89.4 bits (220), Expect = 4e-17 Identities = 67/261 (25%), Positives = 125/261 (47%), Gaps = 5/261 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VGDL ++E+ L F +G V++I+V R+ + S GY +V F A AE+AL Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 ++ N + ++ W+ +RS + ++F+ +L + + + + F + + ++ Sbjct: 63 MNFDLVRN--KPIRIMWSQRDPSLRRSGVG---NVFIKNLDRAIDNKAIYDTF-SAFGNI 116 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV D G S+GYGFV F + ++ ++NGM + + + +G PR+ Sbjct: 117 LSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRK------ 169 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQ 1071 + VYV + +++L++ F YG + S K+ K GFV Sbjct: 170 EREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVA 229 Query: 1072 FINRADAEEALQGLSGSTIGK 1134 F AE A+Q L+G +G+ Sbjct: 230 FETTEAAEAAVQALNGKDMGE 250 Score = 72.8 bits (177), Expect = 4e-12 Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 12/181 (6%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++V + D+ L F P G++ + KV+ ++ G S+G+GFV F + +AE A+Q Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243 Query: 550 AGHVM------------PNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDML 693 G M +R +L + +KR E +++V +L + DD L Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRL 303 Query: 694 MELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGP 873 F+ Y ++ AKV+ D GRS+G+GFV F + T A+TE+NG ++P+ + Sbjct: 304 RIAFS-PYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVAL 361 Query: 874 A 876 A Sbjct: 362 A 362 Score = 71.6 bits (174), Expect = 9e-12 Identities = 70/301 (23%), Positives = 126/301 (41%), Gaps = 21/301 (6%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN- 546 +++ +L +D ++ F G +++ KV + G S+GYGFV F + +A ++ Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEEAANTSIDKV 150 Query: 547 ----------FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLM 696 + G +P +R +L GEK + ++V + D D+ L Sbjct: 151 NGMLLNGKKVYVGKFIPRKEREKEL-------GEKAKLFTN---VYVKNFTEDFDDEKLK 200 Query: 697 ELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYC----STRPIR 864 E F Y + KV+ G+S+G+GFV F A+ +NG S R Sbjct: 201 EFF-EPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVAR 258 Query: 865 IGPATPRRTSGDSGTSPTTQSDGDST-NRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI 1041 R+ Q +S +YV LD + +D LR F+ YG++ S K+ Sbjct: 259 AQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKV 318 Query: 1042 PV-----GKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHRR 1206 K GFV F ++A A+ L+G +G + + ++ + +++ S + R Sbjct: 319 MTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMR 378 Query: 1207 N 1209 + Sbjct: 379 H 379 Score = 37.7 bits (86), Expect = 0.14 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIP----VGKQCGF--VQFINRADAEEALQG 1110 ++YVG L +V+E L F+ G V S+++ + G+ V F ADAE AL Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62 Query: 1111 LSGSTIGKQAVRLSWG-RSPASKQS 1182 ++ + + +R+ W R P+ ++S Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRS 87
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 86.3 bits (212), Expect = 3e-16 Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 12/184 (6%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I+VG+L + D L F +G V ++VI ++ +G S G+GFV S E A Q F Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELA------------SDHSIFVGDLAVDVTDDML 693 G+ + RA ++N S EKR + S + ++VG+LA V D L Sbjct: 149 NGYELDG--RALRVN--SGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDAL 204 Query: 694 MELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGP 873 LF+ + + V AKV+ D ++GRSRG+GFV + + +A+ ++G+ + R IR+ P Sbjct: 205 ETLFSEQGKVVD-AKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSP 263 Query: 874 ATPR 885 A R Sbjct: 264 AEAR 267 Score = 80.1 bits (196), Expect = 2e-14 Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 8/187 (4%) Frame = +1 Query: 616 EKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFG 795 E+ + D IFVG+L L ELF + +V+ +VI D TGRSRG+GFV Sbjct: 78 EEERNFSPDLKIFVGNLPFSADSAALAELF-ERAGNVEMVEVIYDKLTGRSRGFGFVTMS 136 Query: 796 DDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDG--DSTNRTVYVGGL 969 + A + NG R +R+ P +S ++ G DS+NR VYVG L Sbjct: 137 SKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNR-VYVGNL 195 Query: 970 DPNVSEDELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLSGSTIG 1131 V +D L F++ G V K+ + G FV + + + A++ L G + Sbjct: 196 AWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLN 255 Query: 1132 KQAVRLS 1152 +A+R+S Sbjct: 256 GRAIRVS 262 Score = 50.8 bits (120), Expect = 2e-05 Identities = 23/67 (34%), Positives = 40/67 (59%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + ++VG+L + +D++ L + F G+VV KV+ +R SG S G+GFV + S Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244 Query: 535 ALQNFAG 555 A+++ G Sbjct: 245 AIESLDG 251
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 84.0 bits (206), Expect = 2e-15 Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 10/194 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 +E T++VG L + +D+ +L F G +V +VI + SG S+GYG+V+F + +A+ Sbjct: 260 NETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKA 319 Query: 535 AL-----QNFAGHV----MPNTDRAFKLNWASYSVGEKRSELAS-DHSIFVGDLAVDVTD 684 A+ + G + + N A +A G +L+ ++FVG+L+ + T+ Sbjct: 320 AVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFNATE 379 Query: 685 DMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIR 864 D L F ++ ++ D +GR +G+G+V F DID EMNG + + RP R Sbjct: 380 DDLSTAFGG-CGDIQSIRLPTDPQSGRLKGFGYVTF-SDIDSAKKCVEMNGHFIAGRPCR 437 Query: 865 IGPATPRRTSGDSG 906 + +TPR G G Sbjct: 438 LDFSTPRTGGGSRG 451 Score = 77.4 bits (189), Expect = 2e-13 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 9/193 (4%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++FVG L+ +V D L + F +Y ++ GA+VI+D +GRS+GYG+V F A+ Sbjct: 264 TVFVGRLSWNVDDQWLGQEF-EEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVA 322 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNR---TVYVGGLDPNVSEDEL 996 R + + + PR + + GD + TV+VG L N +ED+L Sbjct: 323 ANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFNATEDDL 382 Query: 997 RKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLSGSTIGKQAVRLSWG 1158 F GD+ S+++P Q G+V F + A++ ++ ++G I + RL + Sbjct: 383 STAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-MNGHFIAGRPCRLDFS 441 Query: 1159 RSPASKQSRGDSG 1197 SRG G Sbjct: 442 TPRTGGGSRGGRG 454
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 83.6 bits (205), Expect = 2e-15 Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 18/190 (9%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I+VG+L + D L F +G V ++VI ++ +G S G+GFV S E A Q F Sbjct: 89 IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELA------------------SDHSIFVGDLAVD 675 G+ + RA ++N S EKR + S + ++VG+LA Sbjct: 149 NGYELDG--RALRVN--SGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWG 204 Query: 676 VTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTR 855 V D L LF+ + + V AKV+ D ++GRSRG+GFV + + +A+ ++G+ + R Sbjct: 205 VDQDALETLFSEQGKVVD-AKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGR 263 Query: 856 PIRIGPATPR 885 IR+ PA R Sbjct: 264 AIRVSPAEAR 273 Score = 78.2 bits (191), Expect = 9e-14 Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 14/211 (6%) Frame = +1 Query: 562 MPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKV 741 +P+ D+ + V E+R+ + D IFVG+L L ELF + +V+ +V Sbjct: 61 LPDFDQIEDVEDGDEGVEEERN-FSPDLKIFVGNLLFSADSAALAELF-ERAGNVEMVEV 118 Query: 742 IIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTT 921 I D TGRSRG+GFV + A + NG R +R+ P +S + Sbjct: 119 IYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENS 178 Query: 922 QSDG--------DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------ 1059 G DS+NR VYVG L V +D L F++ G V K+ + Sbjct: 179 SFRGGSRGGGSFDSSNR-VYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGF 237 Query: 1060 GFVQFINRADAEEALQGLSGSTIGKQAVRLS 1152 GFV + + + A++ L G + +A+R+S Sbjct: 238 GFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 268 Score = 50.8 bits (120), Expect = 2e-05 Identities = 23/67 (34%), Positives = 40/67 (59%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + ++VG+L + +D++ L + F G+VV KV+ +R SG S G+GFV + S Sbjct: 191 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 250 Query: 535 ALQNFAG 555 A+++ G Sbjct: 251 AIESLDG 257
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 83.6 bits (205), Expect = 2e-15 Identities = 82/333 (24%), Positives = 134/333 (40%), Gaps = 59/333 (17%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + V L M + L S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS--DHSIFVGDLAVDVTDDMLMELFA 708 A+ NT +L + V R AS D +++V L +T L +LF Sbjct: 96 AI---------NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF- 145 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMY--CSTRPIRI----- 867 ++Y + +++++D TG SRG GF+RF I+ A+ +NG +T PI + Sbjct: 146 SQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 205 Query: 868 ----------------------GPA----------------------TPRRTSGDSGTSP 915 GP +P G + + Sbjct: 206 PSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAG 265 Query: 916 TTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI------PVGKQCGFVQFI 1077 T ++V L P+ E L + F +G V +VK+ K GFV Sbjct: 266 INIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 325 Query: 1078 NRADAEEALQGLSGSTIGKQAVRLSWGRSPASK 1176 N +A A+ L+G +G + +++S+ + K Sbjct: 326 NYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358 Score = 78.6 bits (192), Expect = 7e-14 Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 8/191 (4%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++ V L ++T + L LF + ++ K++ D TG+S GYGFV + D D Sbjct: 37 SKTNLIVNYLPQNMTQEELKSLFGS-IGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A+ +NG+ T+ I++ A P S + +YV GL +++ EL Sbjct: 96 AINTLNGLRLQTKTIKVSYARP--------------SSASIRDANLYVSGLPKTMTQKEL 141 Query: 997 RKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGSTI--GKQAVRLS 1152 + F++YG + + +I + + GF++F R +AEEA++GL+G + + + Sbjct: 142 EQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVK 201 Query: 1153 WGRSPASKQSR 1185 + +P+ K ++ Sbjct: 202 FANNPSQKTNQ 212
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 83.6 bits (205), Expect = 2e-15 Identities = 82/333 (24%), Positives = 134/333 (40%), Gaps = 59/333 (17%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + V L M + L S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS--DHSIFVGDLAVDVTDDMLMELFA 708 A+ NT +L + V R AS D +++V L +T L +LF Sbjct: 96 AI---------NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF- 145 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMY--CSTRPIRI----- 867 ++Y + +++++D TG SRG GF+RF I+ A+ +NG +T PI + Sbjct: 146 SQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 205 Query: 868 ----------------------GPA----------------------TPRRTSGDSGTSP 915 GP +P G + + Sbjct: 206 PSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAG 265 Query: 916 TTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI------PVGKQCGFVQFI 1077 T ++V L P+ E L + F +G V +VK+ K GFV Sbjct: 266 INIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMT 325 Query: 1078 NRADAEEALQGLSGSTIGKQAVRLSWGRSPASK 1176 N +A A+ L+G +G + +++S+ + K Sbjct: 326 NYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358 Score = 78.6 bits (192), Expect = 7e-14 Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 8/191 (4%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++ V L ++T + L LF + ++ K++ D TG+S GYGFV + D D Sbjct: 37 SKTNLIVNYLPQNMTQEELKSLFGS-IGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A+ +NG+ T+ I++ A P S + +YV GL +++ EL Sbjct: 96 AINTLNGLRLQTKTIKVSYARP--------------SSASIRDANLYVSGLPKTMTQKEL 141 Query: 997 RKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGSTI--GKQAVRLS 1152 + F++YG + + +I + + GF++F R +AEEA++GL+G + + + Sbjct: 142 EQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVK 201 Query: 1153 WGRSPASKQSR 1185 + +P+ K ++ Sbjct: 202 FANNPSQKTNQ 212
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 83.2 bits (204), Expect = 3e-15 Identities = 82/334 (24%), Positives = 134/334 (40%), Gaps = 60/334 (17%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + V L M + L S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS--DHSIFVGDLAVDVTDDMLMELFA 708 A+ NT +L + V R AS D +++V L +T L +LF Sbjct: 96 AI---------NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF- 145 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMY--CSTRPIRI----- 867 ++Y + +++++D TG SRG GF+RF I+ A+ +NG +T PI + Sbjct: 146 SQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 205 Query: 868 ----------------------GPA-----------------------TPRRTSGDSGTS 912 GP +P G + + Sbjct: 206 PSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLA 265 Query: 913 PTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI------PVGKQCGFVQF 1074 T ++V L P+ E L + F +G V +VK+ K GFV Sbjct: 266 GINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTM 325 Query: 1075 INRADAEEALQGLSGSTIGKQAVRLSWGRSPASK 1176 N +A A+ L+G +G + +++S+ + K Sbjct: 326 TNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 359 Score = 78.6 bits (192), Expect = 7e-14 Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 8/191 (4%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++ V L ++T + L LF + ++ K++ D TG+S GYGFV + D D Sbjct: 37 SKTNLIVNYLPQNMTQEELKSLFGS-IGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A+ +NG+ T+ I++ A P S + +YV GL +++ EL Sbjct: 96 AINTLNGLRLQTKTIKVSYARP--------------SSASIRDANLYVSGLPKTMTQKEL 141 Query: 997 RKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGSTI--GKQAVRLS 1152 + F++YG + + +I + + GF++F R +AEEA++GL+G + + + Sbjct: 142 EQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVK 201 Query: 1153 WGRSPASKQSR 1185 + +P+ K ++ Sbjct: 202 FANNPSQKTNQ 212
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 83.2 bits (204), Expect = 3e-15 Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 44/304 (14%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTD 576 M ++ L S F GEV + K+IR++ +G S GYGFV + + AE+A+ G + Sbjct: 31 MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRLQS 88 Query: 577 RAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDAN 756 + K+++A S SE+ D ++++ L +T + ++F +++ + ++V++D Sbjct: 89 KTIKVSYARPS-----SEVIKDANLYISGLPRTMTQKDVEDMF-SRFGRIINSRVLVDQT 142 Query: 757 TGRSRGYGFVRFGDDIDRTHAMTEMNGMY--CSTRPIRI--------------------- 867 TG SRG F+RF + A+T NG S+ PI + Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202 Query: 868 ------GPA---------TPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRK 1002 GP +P SG S S+ +++ L + E L + Sbjct: 203 PARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQ 262 Query: 1003 TFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 F +G V +VK+ K GFV N +A A+ L+G +G + +++S+ + Sbjct: 263 MFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTN 322 Query: 1165 PASK 1176 + K Sbjct: 323 KSHK 326 Score = 63.9 bits (154), Expect = 2e-09 Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 6/164 (3%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++ V L ++T D L LF++ V+ AK+I D G S GYGFV + D A+ Sbjct: 21 NLIVNYLPQNMTQDELRSLFSS-IGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKT 1005 +NG+ ++ I++ A P S + +Y+ GL +++ ++ Sbjct: 80 TLNGLRLQSKTIKVSYARP--------------SSEVIKDANLYISGLPRTMTQKDVEDM 125 Query: 1006 FAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLSG 1119 F+++G + + ++ V + G F++F R++AEEA+ +G Sbjct: 126 FSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG 169 Score = 47.8 bits (112), Expect = 1e-04 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Frame = +1 Query: 931 GDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADA 1092 GD + V L N+++DELR F+ G+V S K+ K GFV ++ DA Sbjct: 15 GDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74 Query: 1093 EEALQGLSGSTIGKQAVRLSWGRSPASK 1176 E A+ L+G + + +++S+ R P+S+ Sbjct: 75 ERAINTLNGLRLQSKTIKVSYAR-PSSE 101 Score = 41.6 bits (96), Expect = 0.010 Identities = 21/63 (33%), Positives = 35/63 (55%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L DE L FGP G V +KVIR+ ++ +G+GFV ++ A A+ + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 550 AGH 558 G+ Sbjct: 306 NGY 308
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 82.4 bits (202), Expect = 5e-15 Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 3/179 (1%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E ++VG+L Y +D L F +G V +VI NR + S G+GFV + AEKA Sbjct: 53 EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 112 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRS---ELASDHSIFVGDLAVDVTDDMLMELFA 708 ++ G+ M R +N A+ +R+ + ++VG+L DV L +LF Sbjct: 113 VELLNGYDMDG--RQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLF- 169 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPR 885 +++ V A+V+ D TGRSRG+GFV + + A+ ++G R +R+ A R Sbjct: 170 SEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEER 228 Score = 73.9 bits (180), Expect = 2e-12 Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 7/187 (3%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G+ SE + +FVG+L DV + L +F + V+ A+VI + T RSRG+GFV Sbjct: 45 GQGFSEPPEEAKLFVGNLPYDVDSEKLAGIF-DAAGVVEIAEVIYNRETDRSRGFGFVTM 103 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGD-STNRTVYVGGL 969 + A+ +NG R + + A PR SP GD + VYVG L Sbjct: 104 STVEEAEKAVELLNGYDMDGRQLTVNKAAPRG-------SPERAPRGDFEPSCRVYVGNL 156 Query: 970 DPNVSEDELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLSGSTIG 1131 +V L + F+++G V S ++ ++ G FV + ++ +A+ L G T+ Sbjct: 157 PWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLD 216 Query: 1132 KQAVRLS 1152 +AVR++ Sbjct: 217 GRAVRVN 223
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 82.4 bits (202), Expect = 5e-15 Identities = 79/319 (24%), Positives = 130/319 (40%), Gaps = 59/319 (18%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTD 576 M + L S FG GE+ + K++R++ +G S GYGFV + AEKA+ NT Sbjct: 50 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI---------NTL 100 Query: 577 RAFKLNWASYSVGEKRSELAS--DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIID 750 +L + V R AS D +++V L +T L +LF ++Y + +++++D Sbjct: 101 NGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVD 159 Query: 751 ANTGRSRGYGFVRFGDDIDRTHAMTEMNGMY--CSTRPIRI------------------- 867 TG SRG GF+RF I+ A+ +NG +T PI + Sbjct: 160 QVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLY 219 Query: 868 --------GPA----------------------TPRRTSGDSGTSPTTQSDGDSTNRTVY 957 GP +P G + + T ++ Sbjct: 220 QSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIF 279 Query: 958 VGGLDPNVSEDELRKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSG 1119 V L P+ E L + F +G V +VK+ K GFV N +A A+ L+G Sbjct: 280 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339 Query: 1120 STIGKQAVRLSWGRSPASK 1176 +G + +++S+ + K Sbjct: 340 YRLGDRVLQVSFKTNKTHK 358 Score = 76.6 bits (187), Expect = 3e-13 Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 8/182 (4%) Frame = +1 Query: 664 LAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMY 843 L ++T + L LF + ++ K++ D TG+S GYGFV + D D A+ +NG+ Sbjct: 46 LPQNMTQEELKSLFGS-IGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLR 104 Query: 844 CSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 T+ I++ A P S + +YV GL +++ EL + F++YG Sbjct: 105 LQTKTIKVSYARP--------------SSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150 Query: 1024 VASVKI------PVGKQCGFVQFINRADAEEALQGLSGSTI--GKQAVRLSWGRSPASKQ 1179 + + +I + + GF++F R +AEEA++GL+G + + + + +P+ K Sbjct: 151 IITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKT 210 Query: 1180 SR 1185 ++ Sbjct: 211 NQ 212 Score = 41.6 bits (96), Expect = 0.010 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I+V +L DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A A+ + Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 550 AGH 558 G+ Sbjct: 338 NGY 340
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 81.3 bits (199), Expect = 1e-14 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 5/258 (1%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VGDL + E+ L+ F P+G + ++ R+ + GYG+V F A AE AL Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 ++ + F+L W S + R + +IF+ +L + + L LF + + ++ Sbjct: 80 NFDLI--NGKPFRLMW---SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNIL 133 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 KV+ D N S+GY +V F A+ MNG+ + R + +G R Sbjct: 134 SCKVVCDDN--GSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVG-----RFKFPEER 186 Query: 910 SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQF 1074 + ++ +T V+V + ++ +++L++ F +YG SVK+ K GFV++ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246 Query: 1075 INRADAEEALQGLSGSTI 1128 A++A+ L G +I Sbjct: 247 ETHEAAQKAVLDLHGKSI 264 Score = 66.6 bits (161), Expect = 3e-10 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN---------- 546 +D+ L F G ++KVIR+ SG S+G+GFV + +H +A+KA+ + Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 547 -FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 + G +R +L + K I++ +L + D+ L E F++ + S Sbjct: 269 LYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSS-FGS 327 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + AKV+++ G+ +G+G V F + T A+ EMNG ++P+ + RR Sbjct: 328 ISRAKVMMEV--GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARR 380 Score = 54.3 bits (129), Expect = 1e-06 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 4/192 (2%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G+K+ L + +++VGDL DVT+DML + F ++ ++ D T GYG+V F Sbjct: 10 GKKKKYLKA--ALYVGDLDPDVTEDMLYKKF-RPAGPLRFTRICRDPVTRSPLGYGYVNF 66 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 D A+ MN + +P R+ + P SG +++ LD Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVG------------NIFIKNLD 114 Query: 973 PNVSEDELRKTFAKYGDVASVKIPV----GKQCGFVQFINRADAEEALQGLSGSTIGKQA 1140 ++ L F+ +G++ S K+ K +V F + A A A+ ++G + + Sbjct: 115 KSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 1141 VRLSWGRSPASK 1176 V + + P + Sbjct: 175 VYVGRFKFPEER 186
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 81.3 bits (199), Expect = 1e-14 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 5/258 (1%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VGDL + E+ L+ F P+G + ++ R+ + GYG+V F A AE AL Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 ++ + F+L W S + R + +IF+ +L + + L LF + + ++ Sbjct: 80 NFDLI--NGKPFRLMW---SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNIL 133 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 KV+ D N S+GY +V F A+ MNG+ + R + +G R Sbjct: 134 SCKVVCDDN--GSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVG-----RFKFPEER 186 Query: 910 SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQF 1074 + ++ +T V+V + ++ +++L++ F +YG SVK+ K GFV++ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246 Query: 1075 INRADAEEALQGLSGSTI 1128 A++A+ L G +I Sbjct: 247 ETHEAAQKAVLDLHGKSI 264 Score = 66.6 bits (161), Expect = 3e-10 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN---------- 546 +D+ L F G ++KVIR+ SG S+G+GFV + +H +A+KA+ + Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 547 -FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 + G +R +L + K I++ +L + D+ L E F++ + S Sbjct: 269 LYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSS-FGS 327 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + AKV+++ G+ +G+G V F + T A+ EMNG ++P+ + RR Sbjct: 328 ISRAKVMMEV--GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARR 380 Score = 54.3 bits (129), Expect = 1e-06 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 4/192 (2%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G+K+ L + +++VGDL DVT+DML + F ++ ++ D T GYG+V F Sbjct: 10 GKKKKYLKA--ALYVGDLDPDVTEDMLYKKF-RPAGPLRFTRICRDPVTRSPLGYGYVNF 66 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 D A+ MN + +P R+ + P SG +++ LD Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVG------------NIFIKNLD 114 Query: 973 PNVSEDELRKTFAKYGDVASVKIPV----GKQCGFVQFINRADAEEALQGLSGSTIGKQA 1140 ++ L F+ +G++ S K+ K +V F + A A A+ ++G + + Sbjct: 115 KSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 1141 VRLSWGRSPASK 1176 V + + P + Sbjct: 175 VYVGRFKFPEER 186
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 81.3 bits (199), Expect = 1e-14 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 5/258 (1%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VGDL + E+ L+ F P+G + ++ R+ + GYG+V F A AE AL Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 ++ + F+L W S + R + +IF+ +L + + L LF + + ++ Sbjct: 80 NFDLI--NGKPFRLMW---SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNIL 133 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 KV+ D N S+GY +V F A+ MNG+ + R + +G R Sbjct: 134 SCKVVCDDN--GSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVG-----RFKFPEER 186 Query: 910 SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQF 1074 + ++ +T V+V + ++ +++L++ F +YG SVK+ K GFV++ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246 Query: 1075 INRADAEEALQGLSGSTI 1128 A++A+ L G +I Sbjct: 247 ETHEAAQKAVLDLHGKSI 264 Score = 66.6 bits (161), Expect = 3e-10 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN---------- 546 +D+ L F G ++KVIR+ SG S+G+GFV + +H +A+KA+ + Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 547 -FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 + G +R +L + K I++ +L + D+ L E F++ + S Sbjct: 269 LYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSS-FGS 327 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + AKV+++ G+ +G+G V F + T A+ EMNG ++P+ + RR Sbjct: 328 ISRAKVMMEV--GQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQARR 380 Score = 54.3 bits (129), Expect = 1e-06 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 4/192 (2%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G+K+ L + +++VGDL DVT+DML + F ++ ++ D T GYG+V F Sbjct: 10 GKKKKYLKA--ALYVGDLDPDVTEDMLYKKF-RPAGPLRFTRICRDPVTRSPLGYGYVNF 66 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 D A+ MN + +P R+ + P SG +++ LD Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVG------------NIFIKNLD 114 Query: 973 PNVSEDELRKTFAKYGDVASVKIPV----GKQCGFVQFINRADAEEALQGLSGSTIGKQA 1140 ++ L F+ +G++ S K+ K +V F + A A A+ ++G + + Sbjct: 115 KSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 1141 VRLSWGRSPASK 1176 V + + P + Sbjct: 175 VYVGRFKFPEER 186
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 81.3 bits (199), Expect = 1e-14 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 5/258 (1%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VGDL + E+ L+ F P+G + ++ R+ + GYG+V F A AE AL Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 ++ + F+L W S + R + +IF+ +L + + L LF + + ++ Sbjct: 80 NFDLI--NGKPFRLMW---SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNIL 133 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 KV+ D N S+GY +V F A+ MNG+ + R + +G R Sbjct: 134 SCKVVCDDN--GSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVG-----RFKFPEER 186 Query: 910 SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQF 1074 + ++ +T V+V + ++ +++L++ F +YG SVK+ K GFV++ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246 Query: 1075 INRADAEEALQGLSGSTI 1128 A++A+ L G +I Sbjct: 247 ETHEAAQKAVLDLHGKSI 264 Score = 66.6 bits (161), Expect = 3e-10 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN---------- 546 +D+ L F G ++KVIR+ SG S+G+GFV + +H +A+KA+ + Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 547 -FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 + G +R +L + K I++ +L + D+ L E F++ + S Sbjct: 269 LYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSS-FGS 327 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + AKV+++ G+ +G+G V F + T A+ EMNG ++P+ + RR Sbjct: 328 ISRAKVMMEV--GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARR 380 Score = 54.3 bits (129), Expect = 1e-06 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 4/192 (2%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G+K+ L + +++VGDL DVT+DML + F ++ ++ D T GYG+V F Sbjct: 10 GKKKKYLKA--ALYVGDLDPDVTEDMLYKKF-RPAGPLRFTRICRDPVTRSPLGYGYVNF 66 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 D A+ MN + +P R+ + P SG +++ LD Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVG------------NIFIKNLD 114 Query: 973 PNVSEDELRKTFAKYGDVASVKIPV----GKQCGFVQFINRADAEEALQGLSGSTIGKQA 1140 ++ L F+ +G++ S K+ K +V F + A A A+ ++G + + Sbjct: 115 KSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 1141 VRLSWGRSPASK 1176 V + + P + Sbjct: 175 VYVGRFKFPEER 186
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 81.3 bits (199), Expect = 1e-14 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 5/258 (1%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VGDL + E+ L+ F P+G + ++ R+ + GYG+V F A AE AL Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 ++ + F+L W S + R + +IF+ +L + + L LF + + ++ Sbjct: 80 NFDLI--NGKPFRLMW---SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNIL 133 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 KV+ D N S+GY +V F A+ MNG+ + R + +G R Sbjct: 134 SCKVVCDDN--GSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVG-----RFKFPEER 186 Query: 910 SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQF 1074 + ++ +T V+V + ++ +++L++ F +YG SVK+ K GFV++ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246 Query: 1075 INRADAEEALQGLSGSTI 1128 A++A+ L G +I Sbjct: 247 ETHEAAQKAVLDLHGKSI 264 Score = 66.6 bits (161), Expect = 3e-10 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN---------- 546 +D+ L F G ++KVIR+ SG S+G+GFV + +H +A+KA+ + Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 547 -FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 + G +R +L + K I++ +L + D+ L E F++ + S Sbjct: 269 LYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSS-FGS 327 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + AKV+++ G+ +G+G V F + T A+ EMNG ++P+ + RR Sbjct: 328 ISRAKVMMEV--GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARR 380 Score = 54.3 bits (129), Expect = 1e-06 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 4/192 (2%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G+K+ L + +++VGDL DVT+DML + F ++ ++ D T GYG+V F Sbjct: 10 GKKKKYLKA--ALYVGDLDPDVTEDMLYKKF-RPAGPLRFTRICRDPVTRSPLGYGYVNF 66 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 D A+ MN + +P R+ + P SG +++ LD Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVG------------NIFIKNLD 114 Query: 973 PNVSEDELRKTFAKYGDVASVKIPV----GKQCGFVQFINRADAEEALQGLSGSTIGKQA 1140 ++ L F+ +G++ S K+ K +V F + A A A+ ++G + + Sbjct: 115 KSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 1141 VRLSWGRSPASK 1176 V + + P + Sbjct: 175 VYVGRFKFPEER 186
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 81.3 bits (199), Expect = 1e-14 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 5/258 (1%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VGDL + E+ L+ F P+G + ++ R+ + GYG+V F A AE AL Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 ++ + F+L W S + R + +IF+ +L + + L LF + + ++ Sbjct: 80 NFDLI--NGKPFRLMW---SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNIL 133 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 KV+ D N S+GY +V F A+ MNG+ + R + +G R Sbjct: 134 SCKVVCDDN--GSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVG-----RFKFPEER 186 Query: 910 SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQF 1074 + ++ +T V+V + ++ +++L++ F +YG SVK+ K GFV++ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246 Query: 1075 INRADAEEALQGLSGSTI 1128 A++A+ L G +I Sbjct: 247 ETHEAAQKAVLDLHGKSI 264 Score = 66.6 bits (161), Expect = 3e-10 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN---------- 546 +D+ L F G ++KVIR+ SG S+G+GFV + +H +A+KA+ + Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 547 -FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 + G +R +L + K I++ +L + D+ L E F++ + S Sbjct: 269 LYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSS-FGS 327 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + AKV+++ G+ +G+G V F + T A+ EMNG ++P+ + RR Sbjct: 328 ISRAKVMMEV--GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARR 380 Score = 54.3 bits (129), Expect = 1e-06 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 4/192 (2%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G+K+ L + +++VGDL DVT+DML + F ++ ++ D T GYG+V F Sbjct: 10 GKKKKYLKA--ALYVGDLDPDVTEDMLYKKF-RPAGPLRFTRICRDPVTRSPLGYGYVNF 66 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 D A+ MN + +P R+ + P SG +++ LD Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVG------------NIFIKNLD 114 Query: 973 PNVSEDELRKTFAKYGDVASVKIPV----GKQCGFVQFINRADAEEALQGLSGSTIGKQA 1140 ++ L F+ +G++ S K+ K +V F + A A A+ ++G + + Sbjct: 115 KSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 1141 VRLSWGRSPASK 1176 V + + P + Sbjct: 175 VYVGRFKFPEER 186
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 80.9 bits (198), Expect = 1e-14 Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 8/286 (2%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT++V +L Y + E+ + + F + EV +++ N+ G S+G ++EF + A AEKAL+ Sbjct: 371 RTLFVKNLPYRVTEDEMKNVFENALEV---RLVLNKE-GSSKGMAYIEFKTEAEAEKALE 426 Query: 544 NFAGHVMPNTDRAFKLNWA---SYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 G + RA +++ S +K ++ V +L+ +++ L ELF K Sbjct: 427 EKQGTEVDG--RAMVIDYTGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELF-KK 483 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTS 894 S+K + N GR +GY FV F D A+ N R IR+ ++P Sbjct: 484 ATSIK----MPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQK 539 Query: 895 GDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIP-----VGKQC 1059 G+ + + ++T++V GL + +E+ LR++F G +++ + K Sbjct: 540 GNM----NARGGFNQQSKTLFVRGLSEDTTEETLRESFE--GSISARIVTDRDTGSSKGF 593 Query: 1060 GFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSG 1197 GFV F + DA+ A + + I V L + + Q G G Sbjct: 594 GFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFAKPKGEFQRGGGFG 639 Score = 67.4 bits (163), Expect = 2e-10 Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 5/231 (2%) Frame = +1 Query: 478 GVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFV 657 G S+ +G+V+F S +KALQ G + + + + S+ E + E ++FV Sbjct: 318 GSSKRFGYVDFLSAEDMDKALQ-LNGKKLMGLEIKLEKAKSKESLKENKKE-RDARTLFV 375 Query: 658 GDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNG 837 +L VT+D + +F N +++++ G S+G ++ F + + A+ E G Sbjct: 376 KNLPYRVTEDEMKNVFENALE----VRLVLN-KEGSSKGMAYIEFKTEAEAEKALEEKQG 430 Query: 838 MYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKY 1017 R + I +G+ + + G+ ++T+ V L SE+ L++ F K Sbjct: 431 TEVDGRAMVID------YTGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELFKK- 483 Query: 1018 GDVASVKIPVGKQ-----CGFVQFINRADAEEALQGLSGSTIGKQAVRLSW 1155 S+K+P Q FV+F DA+EAL + + I +A+RL + Sbjct: 484 --ATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEF 532 Score = 58.9 bits (141), Expect = 6e-08 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 8/184 (4%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E++T+ V +L Y E L F + +IK+ +N + G +GY FVEF + A++A Sbjct: 459 ESKTLIVNNLSYAASEETLQELFK---KATSIKMPQN-NQGRPKGYAFVEFPTAEDAKEA 514 Query: 538 LQNFAGHVMPNTD---RAFKL-----NWASYSVGEKRSELASDHSIFVGDLAVDVTDDML 693 L + NT+ RA +L +W ++ + ++FV L+ D T++ L Sbjct: 515 LNS-----CNNTEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSKTLFVRGLSEDTTEETL 569 Query: 694 MELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGP 873 E F A+++ D +TG S+G+GFV F D A M + + Sbjct: 570 RESFEGSI----SARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDF 625 Query: 874 ATPR 885 A P+ Sbjct: 626 AKPK 629 Score = 33.5 bits (75), Expect = 2.6 Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 7/114 (6%) Frame = +1 Query: 853 RPIRIGPATPRRTSGDSGT--SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYG-- 1020 +P++ P ++ + + +++ ++ +++V L P +ELR ++ Sbjct: 248 KPVKEAPGKRKKEMANKSAPEAKKKKTETPASAFSLFVKNLTPTKDYEELRTAIKEFFGK 307 Query: 1021 ---DVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPAS 1173 V+ V+I K+ G+V F++ D ++ALQ L+G + ++L +S S Sbjct: 308 KNLQVSEVRIGSSKRFGYVDFLSAEDMDKALQ-LNGKKLMGLEIKLEKAKSKES 360
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 80.5 bits (197), Expect = 2e-14 Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 8/188 (4%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++ V L ++T D LF + ++ K++ D TG+S GYGFV + D D Sbjct: 37 SKTNLIVNYLPQNMTQDEFKSLFGS-IGDIESCKLVRDKITGQSLGYGFVNYSDPNDADK 95 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A+ +NG+ T+ I++ A P S + +YV GL +S+ E+ Sbjct: 96 AINTLNGLKLQTKTIKVSYARP--------------SSASIRDANLYVSGLPKTMSQKEM 141 Query: 997 RKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGSTI--GKQAVRLS 1152 + F++YG + + +I V + GF++F R +AEEA++GL+G + + + Sbjct: 142 EQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVK 201 Query: 1153 WGRSPASK 1176 + +P+ K Sbjct: 202 FANNPSQK 209 Score = 50.8 bits (120), Expect = 2e-05 Identities = 60/277 (21%), Positives = 108/277 (38%), Gaps = 8/277 (2%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++V L M + + F G ++T +++ ++ +GVS G GF+ F AE+A++ Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 G + +A+ + +K + +L L+ + R Sbjct: 187 NGQKPLGAAEPITVKFAN-NPSQKTGQA------------------LLTHLYQSSARRYA 227 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIR-IGPATPRRTSGDSG 906 G + T R R +D +N Y P+ I +P G SG Sbjct: 228 GP---LHHQTQRFR----------LDNL-----LNMAYGVKSPLSLIARFSPIAIDGMSG 269 Query: 907 TSPTTQSDGDS-TNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI------PVGKQCGF 1065 + S G + ++V L P E L + F +G V +VK+ K GF Sbjct: 270 LAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGF 329 Query: 1066 VQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASK 1176 V N +A A+ L+G +G++ +++S+ S K Sbjct: 330 VTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHK 366 Score = 45.4 bits (106), Expect = 7e-04 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 7/113 (6%) Frame = +1 Query: 868 GPATPRRTSGDS-GTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIP 1044 GPA P +G GT+ T D + + V L N+++DE + F GD+ S K+ Sbjct: 16 GPAGPALPNGPLLGTNGAT----DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLV 71 Query: 1045 VGK------QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 K GFV + + DA++A+ L+G + + +++S+ R P+S R Sbjct: 72 RDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR-PSSASIR 123
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 80.5 bits (197), Expect = 2e-14 Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 8/188 (4%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++ V L ++T D LF + ++ K++ D TG+S GYGFV + D D Sbjct: 37 SKTNLIVNYLPQNMTQDEFKSLFGS-IGDIESCKLVRDKITGQSLGYGFVNYSDPNDADK 95 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A+ +NG+ T+ I++ A P S + +YV GL +S+ E+ Sbjct: 96 AINTLNGLKLQTKTIKVSYARP--------------SSASIRDANLYVSGLPKTMSQKEM 141 Query: 997 RKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGSTI--GKQAVRLS 1152 + F++YG + + +I V + GF++F R +AEEA++GL+G + + + Sbjct: 142 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVK 201 Query: 1153 WGRSPASK 1176 + +P+ K Sbjct: 202 FANNPSQK 209 Score = 50.1 bits (118), Expect = 3e-05 Identities = 60/277 (21%), Positives = 108/277 (38%), Gaps = 8/277 (2%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++V L M + + F G ++T +++ ++ +GVS G GF+ F AE+A++ Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 G + +A+ + +K + +L L+ + R Sbjct: 187 NGQKPLGAAEPITVKFAN-NPSQKTGQA------------------LLTHLYQSSARRYA 227 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIR-IGPATPRRTSGDSG 906 G + T R R +D +N Y P+ I +P G SG Sbjct: 228 GP---LHHQTQRFR----------LDNL-----LNMAYGVKSPLSLIARFSPIAIDGMSG 269 Query: 907 TSPTTQSDGDS-TNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI------PVGKQCGF 1065 + S G + ++V L P E L + F +G V +VK+ K GF Sbjct: 270 LAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGF 329 Query: 1066 VQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASK 1176 V N +A A+ L+G +G++ +++S+ S K Sbjct: 330 VTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHK 366 Score = 45.4 bits (106), Expect = 7e-04 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 7/113 (6%) Frame = +1 Query: 868 GPATPRRTSGDS-GTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIP 1044 GPA P +G GT+ T D + + V L N+++DE + F GD+ S K+ Sbjct: 16 GPAGPALPNGPLLGTNGAT----DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLV 71 Query: 1045 VGK------QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 K GFV + + DA++A+ L+G + + +++S+ R P+S R Sbjct: 72 RDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR-PSSASIR 123
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 80.1 bits (196), Expect = 2e-14 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E ++VG+L + M + L F +G V ++++ +R + S G+ FV S A++A Sbjct: 112 EGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEA 171 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELA------------SDHSIFVGDLAVDVT 681 ++ F G + R K+N+ G +R ++ S H ++V +L+ +T Sbjct: 172 IRLFDGSQVGG--RTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALT 229 Query: 682 DDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPI 861 L + FA++ AKVI D ++GRSRG+GF+ F A+ MN + RP+ Sbjct: 230 SQGLRDAFADQ-PGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPL 288 Query: 862 RI---GPATPRRTSGDSGTSPTTQSD 930 R+ G P + TSP SD Sbjct: 289 RLNVAGQKAPVSSPPVVETSPENDSD 314 Score = 52.0 bits (123), Expect = 7e-06 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 10/186 (5%) Frame = +1 Query: 625 SELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDI 804 SE ++VG+L +T L E+FA + +V +++ D T RSRG+ FV G Sbjct: 108 SESVEGGRLYVGNLPFSMTSSQLSEIFA-EAGTVANVEIVYDRVTDRSRGFAFVTMGSVE 166 Query: 805 DRTHAMTEMNGMYCSTRPIRIG-PATPR---RTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 + A+ +G R +++ P PR R + T Q DS ++ +YV L Sbjct: 167 EAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHK-LYVANLS 225 Query: 973 PNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLSGSTIGK 1134 ++ LR FA S K+ + GF+ F + AL ++ + Sbjct: 226 WALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEG 285 Query: 1135 QAVRLS 1152 + +RL+ Sbjct: 286 RPLRLN 291 Score = 36.2 bits (82), Expect = 0.41 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D ++V +L + + L F ++ KVI +R SG S G+GF+ F S + Sbjct: 214 DSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNS 273 Query: 535 ALQNFAGHVMPNTDRAFKLNWA-------SYSVGEKRSELASDHSIFVGDLA 669 AL + + R +LN A S V E E SD+S + L+ Sbjct: 274 ALDTM--NEVELEGRPLRLNVAGQKAPVSSPPVVETSPENDSDNSELLSSLS 323
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 79.7 bits (195), Expect = 3e-14 Identities = 51/182 (28%), Positives = 93/182 (51%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 +++ T++VG L + E L F +G VV + ++R +G +GYGFVEF S A+ Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 A++ +++ + ++N AS L +IF+G+L ++ + +L + F+ Sbjct: 70 AIKIM--NMIKLYGKPIRVNKAS----AHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAF 123 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTS 894 ++ K++ D +TG S+GY F+ F A+ MNG Y RPI + A + + Sbjct: 124 GVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183 Query: 895 GD 900 G+ Sbjct: 184 GE 185 Score = 68.6 bits (166), Expect = 7e-11 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 7/201 (3%) Frame = +1 Query: 625 SELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDI 804 SE D +++VG L V++ +L ELF V + D TG+ +GYGFV F + Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQA-GPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65 Query: 805 DRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVS 984 D +A+ MN + +PIR+ A+ + D G + +++G LDP + Sbjct: 66 DADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGAN-------------IFIGNLDPEID 112 Query: 985 EDELRKTFAKYGDVASV-KIPVGKQCG------FVQFINRADAEEALQGLSGSTIGKQAV 1143 E L TF+ +G + KI G F+ F + ++ A++ ++G + + + Sbjct: 113 EKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPI 172 Query: 1144 RLSWGRSPASKQSRGDSGHRR 1206 +S+ SK R S R Sbjct: 173 TVSYAFKKDSKGERHGSAAER 193
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 79.7 bits (195), Expect = 3e-14 Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 4/180 (2%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E+ ++VG+L Y +D L F +G V +VI NR + S G+GFV + AEKA Sbjct: 134 EDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKA 193 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSE----LASDHSIFVGDLAVDVTDDMLMELF 705 ++ + + + R +N A+ GE+ + I+VG++ + D L +LF Sbjct: 194 VEMYNRYDV--NGRLLTVNKAARR-GERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLF 250 Query: 706 ANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPR 885 + ++ V A+V+ D TGRSRG+GFV + + + A+ ++G R IR+ A R Sbjct: 251 S-EHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR 309 Score = 47.8 bits (112), Expect = 1e-04 Identities = 25/82 (30%), Positives = 45/82 (54%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 +++ I+VG++ + +D+ L F G+VV+ +V+ +R +G S G+GFV S A Sbjct: 227 EQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSD 286 Query: 535 ALQNFAGHVMPNTDRAFKLNWA 600 A+ N G + R ++N A Sbjct: 287 AIANLDGQSLDG--RTIRVNVA 306
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 79.3 bits (194), Expect = 4e-14 Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 7/186 (3%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E+ ++VG+L Y +D L F +G V +VI NR + S G+GFV + A+KA Sbjct: 95 EDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKA 154 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS-----DHSIFVGDLAVDVTDDMLMEL 702 ++ ++ + + R +N A+ R E A + I+VG++ D+ D L ++ Sbjct: 155 VELYSQYDL--NGRLLTVNKAAPR--GSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQV 210 Query: 703 FANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA-- 876 F+ ++ V A+V+ D +GRSRG+GFV + + + A+ ++G R IR+ A Sbjct: 211 FS-EHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEE 269 Query: 877 TPRRTS 894 PRR + Sbjct: 270 RPRRNT 275 Score = 70.5 bits (171), Expect = 2e-11 Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 7/186 (3%) Frame = +1 Query: 616 EKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFG 795 E+ E + D +FVG+L D+ + L +LF + V+ A+VI + T RSRG+GFV Sbjct: 88 EEYQEPSEDAKLFVGNLPYDIDSEGLAQLF-QQAGVVEIAEVIYNRETDRSRGFGFVTM- 145 Query: 796 DDIDRTHAMTEMNGMY-CSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 ++ E+ Y + R + + A PR G+ P +YVG + Sbjct: 146 STVEEADKAVELYSQYDLNGRLLTVNKAAPR------GSRPERAPRTFQPTYRIYVGNIP 199 Query: 973 PNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLSGSTIGK 1134 ++ + L + F+++G V S ++ ++ GFV + A+ EA+ L G T+ Sbjct: 200 WDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDG 259 Query: 1135 QAVRLS 1152 + +R++ Sbjct: 260 RTIRVN 265
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 79.3 bits (194), Expect = 4e-14 Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 5/255 (1%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +++VG+L + E L F G V +I+V R+ + S GY +V F++ EKAL Sbjct: 81 SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 140 Query: 547 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 ++ R ++ W+ ++ ++F+ +L + + L + F + + + Sbjct: 141 LNYTLIKG--RPCRIMWSQRDPSLRK---MGTGNVFIKNLDPAIDNKALHDTF-SAFGKI 194 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 KV +D G ++GYGFV F A+ +NGM + + + +G RR Sbjct: 195 LSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRR----ER 249 Query: 907 TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQ-----CGFVQ 1071 S + TN VY+ LD ++E E F ++G++ S+ + + GFV Sbjct: 250 QSKVEALKANFTN--VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVN 307 Query: 1072 FINRADAEEALQGLS 1116 + N A++A+ L+ Sbjct: 308 YANHECAQKAVDELN 322 Score = 72.4 bits (176), Expect = 5e-12 Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 5/198 (2%) Frame = +1 Query: 607 SVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFV 786 SV + S++VG+L VT+ ML ELF N V +V DA T RS GY +V Sbjct: 68 SVATPSGTAPTSASLYVGELDPSVTEAMLFELF-NSIGPVASIRVCRDAVTRRSLGYAYV 126 Query: 787 RFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 F + D A+ E+N RP RI + + GT V++ Sbjct: 127 NFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTG------------NVFIKN 174 Query: 967 LDPNVSEDELRKTFAKYGDVASVKIPV-----GKQCGFVQFINRADAEEALQGLSGSTIG 1131 LDP + L TF+ +G + S K+ V K GFV F + A A++ ++G + Sbjct: 175 LDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLN 234 Query: 1132 KQAVRLSWGRSPASKQSR 1185 + V + S +QS+ Sbjct: 235 DKKVYVGHHVSRRERQSK 252 Score = 58.5 bits (140), Expect = 8e-08 Identities = 39/180 (21%), Positives = 86/180 (47%), Gaps = 11/180 (6%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN- 546 +++ +L + E FG GE+ ++ ++++++ G+GFV + +H A+KA+ Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDK-PRGFGFVNYANHECAQKAVDEL 321 Query: 547 ----------FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLM 696 + G +R +L + ++ ++F+ +L +V D+ L Sbjct: 322 NDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLK 381 Query: 697 ELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 F+ + ++ AK++ D G+S+G+GFV + + A+TEMN + +P+ + A Sbjct: 382 AEFS-AFGTITSAKIMTDEQ-GKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALA 439 Score = 48.9 bits (115), Expect = 6e-05 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Frame = +1 Query: 871 PATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI--- 1041 P + SGT+PT+ S +YVG LDP+V+E L + F G VAS+++ Sbjct: 63 PTNASSVATPSGTAPTSAS--------LYVGELDPSVTEAMLFELFNSIGPVASIRVCRD 114 Query: 1042 PVGKQC---GFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRG 1188 V ++ +V F N D E+AL L+ + I + R+ W + S + G Sbjct: 115 AVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMG 166
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 79.3 bits (194), Expect = 4e-14 Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 8/191 (4%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++ V L ++T + LF + ++ K++ D TG+S GYGFV + D D Sbjct: 37 SKTNLIVNYLPQNMTQEEFRSLFGS-IGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A+ +NG+ T+ I++ A P S + +YV GL +++ EL Sbjct: 96 AINTLNGLRLQTKTIKVSYARP--------------SSASIRDANLYVSGLPKTMTQKEL 141 Query: 997 RKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGS--TIGKQAVRLS 1152 + F++YG + + +I V + GF++F R +AEEA++GL+G + + + + Sbjct: 142 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 201 Query: 1153 WGRSPASKQSR 1185 + +P+ K S+ Sbjct: 202 FANNPSQKSSQ 212 Score = 78.2 bits (191), Expect = 9e-14 Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 5/196 (2%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + V L M + S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 36 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS--DHSIFVGDLAVDVTDDMLMELFA 708 A+ NT +L + V R AS D +++V L +T L +LF Sbjct: 96 AI---------NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF- 145 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCS--TRPIRIGPA-T 879 ++Y + +++++D TG SRG GF+RF I+ A+ +NG S T PI + A Sbjct: 146 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 205 Query: 880 PRRTSGDSGTSPTTQS 927 P + S + S QS Sbjct: 206 PSQKSSQALLSQLYQS 221 Score = 44.3 bits (103), Expect = 0.001 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 9/112 (8%) Frame = +1 Query: 877 TPRRTSGDSGTSPTTQSDG---DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV 1047 T S ++ P+ G D + + V L N++++E R F G++ S K+ Sbjct: 13 TSNGPSSNNRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVR 72 Query: 1048 GKQCG------FVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 K G FV +I+ DAE+A+ L+G + + +++S+ R P+S R Sbjct: 73 DKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR-PSSASIR 123 Score = 41.6 bits (96), Expect = 0.010 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 IFV +L+ D + +L +LF + +V KVI D NT + +G+GFV + + A+ Sbjct: 292 IFVYNLSPDSDESVLWQLFG-PFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIAS 350 Query: 829 MNGMYCSTRPIRI 867 +NG R +++ Sbjct: 351 LNGYRLGDRVLQV 363 Score = 40.8 bits (94), Expect = 0.016 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I+V +L DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A A+ + Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 550 AGH 558 G+ Sbjct: 352 NGY 354
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 79.3 bits (194), Expect = 4e-14 Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 8/191 (4%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++ V L ++T + LF + ++ K++ D TG+S GYGFV + D D Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGS-IGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 107 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A+ +NG+ T+ I++ A P S + +YV GL +++ EL Sbjct: 108 AINTLNGLRLQTKTIKVSYARP--------------SSASIRDANLYVSGLPKTMTQKEL 153 Query: 997 RKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGS--TIGKQAVRLS 1152 + F++YG + + +I V + GF++F R +AEEA++GL+G + + + + Sbjct: 154 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 213 Query: 1153 WGRSPASKQSR 1185 + +P+ K S+ Sbjct: 214 FANNPSQKSSQ 224 Score = 78.2 bits (191), Expect = 9e-14 Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 5/196 (2%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + V L M + S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 48 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 107 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS--DHSIFVGDLAVDVTDDMLMELFA 708 A+ NT +L + V R AS D +++V L +T L +LF Sbjct: 108 AI---------NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF- 157 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCS--TRPIRIGPA-T 879 ++Y + +++++D TG SRG GF+RF I+ A+ +NG S T PI + A Sbjct: 158 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 217 Query: 880 PRRTSGDSGTSPTTQS 927 P + S + S QS Sbjct: 218 PSQKSSQALLSQLYQS 233 Score = 44.7 bits (104), Expect = 0.001 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 15/135 (11%) Frame = +1 Query: 826 EMNG--MYCSTRPIRI--GPA--TPRRTSGDSGTSPTTQSDG---DSTNRTVYVGGLDPN 978 E NG M ST ++ GP T S ++ P+ G D + + V L N Sbjct: 2 EWNGLKMIISTMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGAATDDSKTNLIVNYLPQN 61 Query: 979 VSEDELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLSGSTIGKQA 1140 ++++E R F G++ S K+ K G FV +I+ DAE+A+ L+G + + Sbjct: 62 MTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKT 121 Query: 1141 VRLSWGRSPASKQSR 1185 +++S+ R P+S R Sbjct: 122 IKVSYAR-PSSASIR 135 Score = 41.6 bits (96), Expect = 0.010 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 IFV +L+ D + +L +LF + +V KVI D NT + +G+GFV + + A+ Sbjct: 304 IFVYNLSPDSDESVLWQLFG-PFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIAS 362 Query: 829 MNGMYCSTRPIRI 867 +NG R +++ Sbjct: 363 LNGYRLGDRVLQV 375 Score = 40.8 bits (94), Expect = 0.016 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I+V +L DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A A+ + Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 550 AGH 558 G+ Sbjct: 364 NGY 366
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 79.3 bits (194), Expect = 4e-14 Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 8/191 (4%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++ V L ++T + LF + ++ K++ D TG+S GYGFV + D D Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGS-IGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A+ +NG+ T+ I++ A P S + +YV GL +++ EL Sbjct: 103 AINTLNGLRLQTKTIKVSYARP--------------SSASIRDANLYVSGLPKTMTQKEL 148 Query: 997 RKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGS--TIGKQAVRLS 1152 + F++YG + + +I V + GF++F R +AEEA++GL+G + + + + Sbjct: 149 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 208 Query: 1153 WGRSPASKQSR 1185 + +P+ K S+ Sbjct: 209 FANNPSQKSSQ 219 Score = 78.2 bits (191), Expect = 9e-14 Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 5/196 (2%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + V L M + S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS--DHSIFVGDLAVDVTDDMLMELFA 708 A+ NT +L + V R AS D +++V L +T L +LF Sbjct: 103 AI---------NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF- 152 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCS--TRPIRIGPA-T 879 ++Y + +++++D TG SRG GF+RF I+ A+ +NG S T PI + A Sbjct: 153 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212 Query: 880 PRRTSGDSGTSPTTQS 927 P + S + S QS Sbjct: 213 PSQKSSQALLSQLYQS 228 Score = 44.3 bits (103), Expect = 0.001 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 9/112 (8%) Frame = +1 Query: 877 TPRRTSGDSGTSPTTQSDG---DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV 1047 T S ++ P+ G D + + V L N++++E R F G++ S K+ Sbjct: 20 TSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVR 79 Query: 1048 GKQCG------FVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 K G FV +I+ DAE+A+ L+G + + +++S+ R P+S R Sbjct: 80 DKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR-PSSASIR 130 Score = 41.6 bits (96), Expect = 0.010 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 IFV +L+ D + +L +LF + +V KVI D NT + +G+GFV + + A+ Sbjct: 299 IFVYNLSPDSDESVLWQLFG-PFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIAS 357 Query: 829 MNGMYCSTRPIRI 867 +NG R +++ Sbjct: 358 LNGYRLGDRVLQV 370 Score = 40.8 bits (94), Expect = 0.016 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I+V +L DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A A+ + Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 550 AGH 558 G+ Sbjct: 359 NGY 361
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 79.0 bits (193), Expect = 5e-14 Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 5/201 (2%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL- 540 RT++ L + L F G+V +++I +R+S S+G +VEF +S A+ Sbjct: 153 RTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIG 212 Query: 541 ---QNFAG-HVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFA 708 Q G ++ +A K N A+ + A ++VG L ++T+DML +F Sbjct: 213 LTGQRVLGVPIIVQASQAEK-NRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIF- 270 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + ++ ++++D+ TGRS+GYGF+ F D A+ ++NG + RP+++G T R Sbjct: 271 EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER- 329 Query: 889 TSGDSGTSPTTQSDGDSTNRT 951 +S ++ D D RT Sbjct: 330 ---TDASSASSFLDSDELERT 347 Score = 50.8 bits (120), Expect = 2e-05 Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 6/174 (3%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++F LA + L E F+ + V+ ++I D N+ RS+G +V F D + Sbjct: 154 TVFCMQLAARIRPRDLEEFFSTVGK-VRDVRMISDRNSRRSKGIAYVEFVD-VSSVPLAI 211 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKT 1005 + G PI + + + + G + +YVG L N++ED LR Sbjct: 212 GLTGQRVLGVPIIVQASQAEKNR--AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGI 269 Query: 1006 FAKYGDVASVKIPV------GKQCGFVQFINRADAEEALQGLSGSTIGKQAVRL 1149 F +G + S+++ + K GF+ F + A++AL+ L+G + + +++ Sbjct: 270 FEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 79.0 bits (193), Expect = 5e-14 Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 5/201 (2%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL- 540 RT++ L + L F G+V +++I +R+S S G +VEF +S A+ Sbjct: 153 RTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAIG 212 Query: 541 ---QNFAG-HVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFA 708 Q G ++ +A K N A+ + A ++VG L ++T+DML +F Sbjct: 213 LTGQRVLGVPIIVQASQAEK-NRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIF- 270 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + ++ ++++D+ TGRS+GYGF+ F D A+ ++NG + RP+++G T R Sbjct: 271 EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER- 329 Query: 889 TSGDSGTSPTTQSDGDSTNRT 951 +S ++ D D RT Sbjct: 330 ---TDASSASSFLDSDELERT 347 Score = 52.8 bits (125), Expect = 4e-06 Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 6/174 (3%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++F LA + L E F+ + V+ ++I D N+ RSRG +V F D + Sbjct: 154 TVFCMQLAARIRPRDLEEFFSTVGK-VRDVRMISDRNSRRSRGIAYVEFVD-VSSVRLAI 211 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKT 1005 + G PI + + + + G + +YVG L N++ED LR Sbjct: 212 GLTGQRVLGVPIIVQASQAEKNR--AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGI 269 Query: 1006 FAKYGDVASVKIPV------GKQCGFVQFINRADAEEALQGLSGSTIGKQAVRL 1149 F +G + S+++ + K GF+ F + A++AL+ L+G + + +++ Sbjct: 270 FEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 79.0 bits (193), Expect = 5e-14 Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 5/201 (2%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL- 540 RT++ L + L F G+V +++I +R+S S+G +VEF +S A+ Sbjct: 153 RTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIG 212 Query: 541 ---QNFAG-HVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFA 708 Q G ++ +A K N A+ + A ++VG L ++T+DML +F Sbjct: 213 LTGQRVLGVPIIVQASQAEK-NRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIF- 270 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + ++ ++++D+ TGRS+GYGF+ F D A+ ++NG + RP+++G T R Sbjct: 271 EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER- 329 Query: 889 TSGDSGTSPTTQSDGDSTNRT 951 +S ++ D D RT Sbjct: 330 ---TDASSASSFLDSDELERT 347 Score = 50.8 bits (120), Expect = 2e-05 Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 6/174 (3%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++F LA + L E F+ + V+ ++I D N+ RS+G +V F D + Sbjct: 154 TVFCMQLAARIRPRDLEEFFSTVGK-VRDVRMISDRNSRRSKGIAYVEFVD-VSSVPLAI 211 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKT 1005 + G PI + + + + G + +YVG L N++ED LR Sbjct: 212 GLTGQRVLGVPIIVQASQAEKNR--AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGI 269 Query: 1006 FAKYGDVASVKIPV------GKQCGFVQFINRADAEEALQGLSGSTIGKQAVRL 1149 F +G + S+++ + K GF+ F + A++AL+ L+G + + +++ Sbjct: 270 FEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 78.2 bits (191), Expect = 9e-14 Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 44/304 (14%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTD 576 M + L S F GEV + K+IR++ +G S GYGFV + + AE+A+ G + Sbjct: 31 MTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRLQS 88 Query: 577 RAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDAN 756 + K+++A S SE+ D ++++ L +T + ++F +++ + ++V++D Sbjct: 89 KTIKVSYARPS-----SEVIKDANLYISGLPRTMTQKDVEDMF-SRFGRIINSRVLVDQT 142 Query: 757 TGRSRGYGFVRFGDDIDRTHAMTEMNGMY--CSTRPIRI--------------------- 867 TG SRG F+RF + A+T G S+ PI + Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHS 202 Query: 868 ------GPA---------TPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRK 1002 GP +P SG S S+ +++ L + E L + Sbjct: 203 PARRFGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQ 262 Query: 1003 TFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 F +G V +VK+ K GFV N ++ A+ L+G +G + +++S+ + Sbjct: 263 MFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRLGDKILQVSFKTN 322 Query: 1165 PASK 1176 + K Sbjct: 323 KSHK 326 Score = 61.6 bits (148), Expect = 9e-09 Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 6/164 (3%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++ V L ++T + L LF++ V+ AK+I D G S GYGFV + D A++ Sbjct: 21 NLIVNYLPQNMTQEELRSLFSS-IGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 79 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKT 1005 +NG+ ++ I++ A P S + +Y+ GL +++ ++ Sbjct: 80 TLNGLRLQSKTIKVSYARP--------------SSEVIKDANLYISGLPRTMTQKDVEDM 125 Query: 1006 FAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLSG 1119 F+++G + + ++ V + G F++F R++AEEA+ G Sbjct: 126 FSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIG 169 Score = 46.2 bits (108), Expect = 4e-04 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Frame = +1 Query: 931 GDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADA 1092 GD + V L N++++ELR F+ G+V S K+ K GFV ++ DA Sbjct: 15 GDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74 Query: 1093 EEALQGLSGSTIGKQAVRLSWGRSPASK 1176 E A+ L+G + + +++S+ R P+S+ Sbjct: 75 ERAISTLNGLRLQSKTIKVSYAR-PSSE 101 Score = 40.4 bits (93), Expect = 0.021 Identities = 20/63 (31%), Positives = 35/63 (55%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 I++ +L DE L FGP G V +KVIR+ ++ +G+GFV ++ + A+ + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305 Query: 550 AGH 558 G+ Sbjct: 306 NGY 308
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 77.8 bits (190), Expect = 1e-13 Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 29/205 (14%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E+ ++VG+L + +D L F +G V ++VI ++ SG S G+GFV + E A Sbjct: 86 EDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAA 145 Query: 538 LQNFAGHVMPNTDRAFKLNW-------------------ASYSVGEKRSE---------- 630 Q F G+ + RA ++N +SY G + Sbjct: 146 EQQFNGYEIDG--RAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRS 203 Query: 631 LASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDR 810 + S + ++VG+L+ V D L ELF+ + +V AKV+ D ++GRSRG+GFV + + Sbjct: 204 VDSSNRVYVGNLSWGVDDLALKELFSEQ-GNVVDAKVVYDRDSGRSRGFGFVTYSSAKEV 262 Query: 811 THAMTEMNGMYCSTRPIRIGPATPR 885 A+ +NG+ R IR+ A R Sbjct: 263 NDAIDSLNGIDLDGRSIRVSAAEER 287 Score = 68.9 bits (167), Expect = 6e-11 Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 27/205 (13%) Frame = +1 Query: 619 KRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 ++ + D +FVG+L V L LF + +V+ +VI D +GRSRG+GFV Sbjct: 80 EQPRFSEDLKLFVGNLPFSVDSAALAGLF-ERAGNVEIVEVIYDKLSGRSRGFGFVTMST 138 Query: 799 DIDRTHAMTEMNGMYCSTRPIRI--GPATPRRTSGDSGTSPTTQS------DG------- 933 + A + NG R IR+ GPA +R + G S DG Sbjct: 139 KEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGA 198 Query: 934 ------DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFI 1077 DS+NR VYVG L V + L++ F++ G+V K+ + GFV + Sbjct: 199 RGGRSVDSSNR-VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYS 257 Query: 1078 NRADAEEALQGLSGSTIGKQAVRLS 1152 + + +A+ L+G + +++R+S Sbjct: 258 SAKEVNDAIDSLNGIDLDGRSIRVS 282 Score = 47.4 bits (111), Expect = 2e-04 Identities = 23/67 (34%), Positives = 36/67 (53%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + ++VG+L + +D+ L F G VV KV+ +R SG S G+GFV + S Sbjct: 205 DSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVND 264 Query: 535 ALQNFAG 555 A+ + G Sbjct: 265 AIDSLNG 271 Score = 37.0 bits (84), Expect = 0.24 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 6/95 (6%) Frame = +1 Query: 937 STNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEE 1098 S + ++VG L +V L F + G+V V++ K G FV + + E Sbjct: 85 SEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEA 144 Query: 1099 ALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHR 1203 A Q +G I +A+R++ G +PA +++ G R Sbjct: 145 AEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGR 179
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 77.4 bits (189), Expect = 2e-13 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 29/205 (14%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E+ ++VG+L + +D L F +G V ++VI ++ +G S G+GFV + E A Sbjct: 85 EDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAA 144 Query: 538 LQNFAGHVMPNTDRAFKLNW-------------------ASYSVGEKRSE---------- 630 Q F G+ + RA ++N +SY G + Sbjct: 145 EQQFNGYEIDG--RAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRS 202 Query: 631 LASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDR 810 + S + ++VG+L+ V D L ELF+ + +V AKV+ D ++GRSRG+GFV + + Sbjct: 203 VDSSNRVYVGNLSWGVDDLALKELFSEQ-GNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261 Query: 811 THAMTEMNGMYCSTRPIRIGPATPR 885 A+ +NG+ R IR+ A R Sbjct: 262 NDAIDSLNGVDLDGRSIRVSAAEER 286 Score = 70.9 bits (172), Expect = 1e-11 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 27/205 (13%) Frame = +1 Query: 619 KRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 ++ + D +FVG+L V L LF + +V+ +VI D TGRSRG+GFV Sbjct: 79 EQPRFSEDLKLFVGNLPFSVDSAALAGLF-ERAGNVEMVEVIYDKLTGRSRGFGFVTMST 137 Query: 799 DIDRTHAMTEMNGMYCSTRPIRI--GPATPRRTSGDSGTSPTTQS------DG------- 933 + A + NG R IR+ GPA +R + G S DG Sbjct: 138 KEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGA 197 Query: 934 ------DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFI 1077 DS+NR VYVG L V + L++ F++ G+V K+ + GFV + Sbjct: 198 RGGRSVDSSNR-VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYS 256 Query: 1078 NRADAEEALQGLSGSTIGKQAVRLS 1152 + + +A+ L+G + +++R+S Sbjct: 257 SSKEVNDAIDSLNGVDLDGRSIRVS 281 Score = 47.8 bits (112), Expect = 1e-04 Identities = 23/67 (34%), Positives = 36/67 (53%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D + ++VG+L + +D+ L F G VV KV+ +R SG S G+GFV + S Sbjct: 204 DSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVND 263 Query: 535 ALQNFAG 555 A+ + G Sbjct: 264 AIDSLNG 270 Score = 37.4 bits (85), Expect = 0.18 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 6/95 (6%) Frame = +1 Query: 937 STNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEE 1098 S + ++VG L +V L F + G+V V++ K G FV + + E Sbjct: 84 SEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEA 143 Query: 1099 ALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHR 1203 A Q +G I +A+R++ G +PA +++ G R Sbjct: 144 AEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGR 178
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 77.0 bits (188), Expect = 2e-13 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 19/197 (9%) Frame = +1 Query: 619 KRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 K ++D +FVG+L +V L +LF + +V+ +VI D TGRSRG+GFV Sbjct: 83 KEQSFSADLKLFVGNLPFNVDSAQLAQLFESA-GNVEMVEVIYDKITGRSRGFGFVTMSS 141 Query: 799 DIDRTHAMTEMNGMYCSTRPIRI--GPATPRRTSGDS-------GTSPTTQ----SDGDS 939 + A + NG RP+R+ GP P+R G S G+S + G Sbjct: 142 VSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAG 201 Query: 940 TNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV------GKQCGFVQFINRADAEEA 1101 + VYVG L V + L F++ G V ++ K GFV + + + + A Sbjct: 202 SGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNA 261 Query: 1102 LQGLSGSTIGKQAVRLS 1152 ++ L G+ + + +R+S Sbjct: 262 IKSLDGADLDGRQIRVS 278 Score = 73.9 bits (180), Expect = 2e-12 Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 21/193 (10%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VG+L + +D L F +G V ++VI ++ +G S G+GFV S + E A Q F Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152 Query: 550 AGHVM-----------PNTDR----------AFKLNWASYSVGEKRSELASDHSIFVGDL 666 G+ + P R +F + + Y G S S + ++VG+L Sbjct: 153 NGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYG-GGGGSGAGSGNRVYVGNL 211 Query: 667 AVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYC 846 + V DDM +E ++ V A+VI D ++GRS+G+GFV + + +A+ ++G Sbjct: 212 SWGV-DDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADL 270 Query: 847 STRPIRIGPATPR 885 R IR+ A R Sbjct: 271 DGRQIRVSEAEAR 283
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 77.0 bits (188), Expect = 2e-13 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 5/196 (2%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL- 540 RT++ L + L F G+V +++I +R+S S+G +VEF S A+ Sbjct: 166 RTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG 225 Query: 541 ---QNFAG-HVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFA 708 Q G ++ +A K A+ + ++ ++VG L ++T+DML +F Sbjct: 226 LTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGN-GGPMRLYVGSLHFNITEDMLRGIF- 283 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 + + ++ D++TGRS+GYGF+ F D A+ ++NG + RP+R+G T R Sbjct: 284 EPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERL 343 Query: 889 TSGDSGTSPTTQSDGD 936 G T P DGD Sbjct: 344 DGGTDITFP----DGD 355 Score = 45.1 bits (105), Expect = 9e-04 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 6/158 (3%) Frame = +1 Query: 694 MELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGP 873 +E F + V+ ++I D N+ RS+G +V F + I + G PI + Sbjct: 182 LEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCE-IQSVPLAIGLTGQRLLGVPIIVQA 240 Query: 874 ATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV-- 1047 + + + + + +G +YVG L N++ED LR F +G + ++ + Sbjct: 241 SQAEKNRLAAMANNLQKGNGGPMR--LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDS 298 Query: 1048 ----GKQCGFVQFINRADAEEALQGLSGSTIGKQAVRL 1149 K GF+ F + A AL+ L+G + + +R+ Sbjct: 299 DTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 76.3 bits (186), Expect = 4e-13 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 3/179 (1%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E ++VG+L Y ++ L F +G V +VI NR + S G+GFV S AE A Sbjct: 148 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETA 207 Query: 538 LQNFAGHVMPNTDRAFKLNWASY--SVGEKRSELASD-HSIFVGDLAVDVTDDMLMELFA 708 ++ F + + R +N A+ S E+ + ++VG+L DV + L +LF+ Sbjct: 208 VEKFNRYDL--NGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFS 265 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPR 885 + V+ A+V+ D TGRSRG+GFV D + A++ ++G R IR+ A R Sbjct: 266 EHGKVVE-ARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEER 323 Score = 65.1 bits (157), Expect = 8e-10 Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 6/181 (3%) Frame = +1 Query: 628 ELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID 807 E + + +FVG+LA DV L LF + +V+ A+VI + T +SRG+GFV + Sbjct: 145 EPSEEAKLFVGNLAYDVNSQALAMLF-EQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDE 203 Query: 808 RTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSE 987 A+ + N + R + + A PR G+ P VYVG L +V Sbjct: 204 AETAVEKFNRYDLNGRLLTVNKAAPR------GSRPERAPRVYEPAFRVYVGNLPWDVDN 257 Query: 988 DELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLSGSTIGKQAVRL 1149 L + F+++G V ++ ++ G FV + + EA+ L G + +A+R+ Sbjct: 258 GRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRV 317 Query: 1150 S 1152 + Sbjct: 318 N 318
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 75.9 bits (185), Expect = 5e-13 Identities = 77/294 (26%), Positives = 123/294 (41%), Gaps = 14/294 (4%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+ +L + + E+ L F + E+ + G S+G ++EF S A AEK L+ Sbjct: 397 RTLLAKNLSFNITEDELKEVFEDAVEIRLVS-----QDGRSKGIAYIEFKSEADAEKNLE 451 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEK--RSELASDHSIFVGD--------LAVDVTDDML 693 G + R+ L Y GEK R E +S + G+ L+ T++ L Sbjct: 452 EKQGAEIDG--RSVSL----YYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETL 505 Query: 694 MELFANKYRSVKGAKVIIDANT-GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIG 870 E+F K + + N G+S+GY F+ F D A+ N M R IR+ Sbjct: 506 QEVFE------KATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLE 559 Query: 871 PATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF---AKYGDVASVKI 1041 PR SP +S ++T++V GL + +E+ L+++F + V + Sbjct: 560 LQGPRG-------SPNARSQ---PSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRET 609 Query: 1042 PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHR 1203 K GFV F + DA+ A + + I V L W + G G R Sbjct: 610 GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGR 663 Score = 66.6 bits (161), Expect = 3e-10 Identities = 53/183 (28%), Positives = 82/183 (44%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E++T+ + +L Y E L F + IKV +N H G S+GY F+EF S A++A Sbjct: 487 ESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNPH-GKSKGYAFIEFASFEDAKEA 542 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKY 717 L + + M R +L G + ++FV L+ D T++ L E F Sbjct: 543 LNSC--NKMEIEGRTIRLELQGPR-GSPNARSQPSKTLFVKGLSEDTTEETLKESFEGSV 599 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 R A+++ D TG S+G+GFV F + D A M + + A P+ G Sbjct: 600 R----ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 655 Query: 898 DSG 906 G Sbjct: 656 FGG 658 Score = 62.4 bits (150), Expect = 5e-09 Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 2/227 (0%) Frame = +1 Query: 475 SGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIF 654 +G + +G+V+F S EKAL+ V N + K G ++ + ++ Sbjct: 347 TGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEK------PKGRDSKKVRAARTLL 400 Query: 655 VGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMN 834 +L+ ++T+D L E+F + ++ + + GRS+G ++ F + D + E Sbjct: 401 AKNLSFNITEDELKEVFED------AVEIRLVSQDGRSKGIAYIEFKSEADAEKNLEEKQ 454 Query: 835 GMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAK 1014 G R + + T + T + G+S +T+ + L + +E+ L++ F K Sbjct: 455 GAEIDGRSVSL-YYTGEKGQRQERTGKNSTWSGES--KTLVLSNLSYSATEETLQEVFEK 511 Query: 1015 YGDVASVKIPVGKQCG--FVQFINRADAEEALQGLSGSTIGKQAVRL 1149 + + P GK G F++F + DA+EAL + I + +RL Sbjct: 512 ATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRL 558 Score = 37.7 bits (86), Expect = 0.14 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Frame = +1 Query: 904 GTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR----KTFAKYGDVASVKIPVG--KQCGF 1065 G+ PTT + +++G L+PN S EL+ + FAK D+A+V + G ++ G+ Sbjct: 304 GSEPTTPFN-------LFIGNLNPNKSVAELKVAISELFAK-NDLAAVDVRTGTNRKFGY 355 Query: 1066 VQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 V F + D E+AL+ L+G + ++L + SK+ R Sbjct: 356 VDFESAEDLEKALE-LTGLKVFGNEIKLEKPKGRDSKKVR 394
>P08199:NUCL_MESAU Nucleolin - Mesocricetus auratus (Golden hamster)| Length = 714 Score = 75.9 bits (185), Expect = 5e-13 Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 13/293 (4%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+ +L + + E+ L F + E+ + G S+G ++EF S A AEK L+ Sbjct: 394 RTLLAKNLSFNITEDELKEVFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLE 448 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEK--RSELASDHSIFVGD--------LAVDVTDDML 693 G + R+ L Y GEK R E +S + G+ L+ T++ L Sbjct: 449 EKQGAEIDG--RSVSL----YYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETL 502 Query: 694 MELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGP 873 E+F K +K + G+S+GY F+ F D A+ N M R IR+ Sbjct: 503 QEVF-EKATFIK----VPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLEL 557 Query: 874 ATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF---AKYGDVASVKIP 1044 PR SP +S ++T++V GL + +E+ L+++F + V + Sbjct: 558 QGPR-------GSPNARS---QPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRETG 607 Query: 1045 VGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHR 1203 K GFV F + DA+ A + + I V L W + G G R Sbjct: 608 SSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGR 660 Score = 64.7 bits (156), Expect = 1e-09 Identities = 52/183 (28%), Positives = 82/183 (44%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E++T+ + +L Y E L F + IKV +N+ G S+GY F+EF S A++A Sbjct: 484 ESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQQ-GKSKGYAFIEFASFEDAKEA 539 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKY 717 L + + M R +L G + ++FV L+ D T++ L E F Sbjct: 540 LNSC--NKMEIEGRTIRLELQGPR-GSPNARSQPSKTLFVKGLSEDTTEETLKESFEGSV 596 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 R A+++ D TG S+G+GFV F + D A M + + A P+ G Sbjct: 597 R----ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 652 Query: 898 DSG 906 G Sbjct: 653 FGG 655 Score = 58.5 bits (140), Expect = 8e-08 Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 5/230 (2%) Frame = +1 Query: 475 SGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIF 654 +G + +G+V+F S EKAL+ V N + K G ++ + ++ Sbjct: 344 TGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEK------PKGRDSKKVRAARTLL 397 Query: 655 VGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMN 834 +L+ ++T+D L E+F + ++ + + G+S+G ++ F + D + E Sbjct: 398 AKNLSFNITEDELKEVFED------ALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQ 451 Query: 835 GMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAK 1014 G R + + T + T + G+S +T+ + L + +E+ L++ F K Sbjct: 452 GAEIDGRSVSL-YYTGEKGQRQERTGKNSTWSGES--KTLVLSNLSYSATEETLQEVFEK 508 Query: 1015 YGDVASVKIPVGKQ-----CGFVQFINRADAEEALQGLSGSTIGKQAVRL 1149 +K+P +Q F++F + DA+EAL + I + +RL Sbjct: 509 ---ATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRL 555 Score = 48.5 bits (114), Expect = 8e-05 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 2/189 (1%) Frame = +1 Query: 625 SELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDI 804 SE + ++F+G+L + + L + + K ++D TG +R +G+V F Sbjct: 302 SESTTPFNLFIGNLNPNKSVAELKVAISEPF--AKNDLAVVDVRTGTNRKFGYVDFESAE 359 Query: 805 DRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVS 984 D A+ E+ G+ I++ R S RT+ L N++ Sbjct: 360 DLEKAL-ELTGLKVFGNEIKLEKPKGR------------DSKKVRAARTLLAKNLSFNIT 406 Query: 985 EDELRKTFAKYGDVASVKIPVGKQCG--FVQFINRADAEEALQGLSGSTIGKQAVRLSWG 1158 EDEL++ F ++ V GK G +++F + ADAE+ L+ G+ I ++V L + Sbjct: 407 EDELKEVFEDALEIRLVS-QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYT 465 Query: 1159 RSPASKQSR 1185 +Q R Sbjct: 466 GEKGQRQER 474
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 73.9 bits (180), Expect = 2e-12 Identities = 87/372 (23%), Positives = 147/372 (39%), Gaps = 74/372 (19%) Frame = +1 Query: 277 QYVKHFAPQASVTXXXXXXXXXXXXXDENRT-IWVGDLQYWMDENYLHSCFGPSGEVVTI 453 Q V+ QA+ E RT + V L M E+ + S F GE+ ++ Sbjct: 155 QQVQQQVQQANTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESV 214 Query: 454 KVIRNRHS-------------GVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLN 594 K+IR++ G S GYGFV + AE+A+ G + N + K++ Sbjct: 215 KLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQN--KTIKVS 272 Query: 595 WASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDA-NTGRSR 771 +A S S+ +++V L +T L +FA + ++ ++++ +A N +++ Sbjct: 273 FARPS-----SDAIKGANLYVSGLPKTMTQQELEAIFA-PFGAIITSRILQNAGNDTQTK 326 Query: 772 GYGFVRFGDDIDRTHAMTEMNGMYCST-----------------------RPIRIGPATP 882 G GF+RF + T A+ +NG S+ P + P Sbjct: 327 GVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLV 386 Query: 883 RRTSGDSGT------------------------------SPTTQSDGDSTNRTVYVGGLD 972 RR G T + TT + G +++ L Sbjct: 387 RRIGGAMHTPVNKGLARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLA 446 Query: 973 PNVSEDELRKTFAKYGDVASVKI---PVGKQC---GFVQFINRADAEEALQGLSGSTIGK 1134 P E L + F +G V SVKI P QC GFV N +A A++ L+G T+G Sbjct: 447 PETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGN 506 Query: 1135 QAVRLSWGRSPA 1170 + +++S+ + A Sbjct: 507 RVLQVSFKTNKA 518 Score = 50.1 bits (118), Expect = 3e-05 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 19/119 (15%) Frame = +1 Query: 889 TSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI--------- 1041 T+G+SG + + T + V L ++EDE+R F+ G++ SVK+ Sbjct: 166 TNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYI 225 Query: 1042 -PVGKQC---------GFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRG 1188 P+ Q GFV ++ DAE+A+ L+G + + +++S+ R P+S +G Sbjct: 226 DPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFAR-PSSDAIKG 283
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 73.6 bits (179), Expect = 2e-12 Identities = 83/345 (24%), Positives = 141/345 (40%), Gaps = 74/345 (21%) Frame = +1 Query: 358 ENRT-IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHS-------------GVSEGY 495 E RT + V L M E+ + S F GE+ ++K+IR++ G S GY Sbjct: 146 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 205 Query: 496 GFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVD 675 GFV + AE+A+ G + N + K+++A S S+ +++V L Sbjct: 206 GFVNYVRPQDAEQAVNVLNGLRLQN--KTIKVSFARPS-----SDAIKGANLYVSGLPKT 258 Query: 676 VTDDMLMELFANKYRSVKGAKVIIDA-NTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCST 852 +T L +FA + ++ ++++ +A N +++G GF+RF + T A+ +NG S+ Sbjct: 259 MTQQELEAIFA-PFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSS 317 Query: 853 -----------------------RPIRIGPATPRRTSGDSGT------------------ 909 P + P RR G T Sbjct: 318 CTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLD 377 Query: 910 ------------SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI---P 1044 + TT + G +++ L P E L + F +G V SVKI P Sbjct: 378 VMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDP 437 Query: 1045 VGKQC---GFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPA 1170 QC GFV N +A A++ L+G T+G + +++S+ + A Sbjct: 438 TTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNKA 482 Score = 56.2 bits (134), Expect = 4e-07 Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 19/221 (8%) Frame = +1 Query: 520 ASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLME 699 A+ ++A+ PNT+ N S S + ++ V L +T+D + Sbjct: 112 AAVQQAVVPQPQQAQPNTNG----NAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRS 167 Query: 700 LFAN--KYRSVK----GAKVIIDA------NTGRSRGYGFVRFGDDIDRTHAMTEMNGMY 843 LF++ + SVK ++V ID + G+S GYGFV + D A+ +NG+ Sbjct: 168 LFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLR 227 Query: 844 CSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 + I++ A P S +YV GL +++ EL FA +G Sbjct: 228 LQNKTIKVSFARP--------------SSDAIKGANLYVSGLPKTMTQQELEAIFAPFGA 273 Query: 1024 VASVKI-------PVGKQCGFVQFINRADAEEALQGLSGST 1125 + + +I K GF++F R +A A+ L+G+T Sbjct: 274 IITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTT 314 Score = 51.6 bits (122), Expect = 9e-06 Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 20/120 (16%) Frame = +1 Query: 889 TSGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDELRKTFAKYGDVASVKI-------- 1041 T+G++G+ S+G + RT + V L ++EDE+R F+ G++ SVK+ Sbjct: 129 TNGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVY 188 Query: 1042 --PVGKQC---------GFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRG 1188 P+ Q GFV ++ DAE+A+ L+G + + +++S+ R P+S +G Sbjct: 189 IDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFAR-PSSDAIKG 247
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 73.2 bits (178), Expect = 3e-12 Identities = 49/182 (26%), Positives = 96/182 (52%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 +++ TI+VG L + E+ L +G VV++ + ++R + +G+GFVEF A+ Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 A++ +++ + K+N AS EK ++ ++ IFVG+L +V + +L + F+ Sbjct: 70 AIKIL--NMIKLYGKPIKVNKAS--AHEKNMDVGAN--IFVGNLDPEVDEKLLYDTFSAF 123 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTS 894 ++ K++ D ++G S+G+ F+ F A+ MNG + R I + A R + Sbjct: 124 GVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSK 183 Query: 895 GD 900 G+ Sbjct: 184 GE 185 Score = 63.9 bits (154), Expect = 2e-09 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 7/200 (3%) Frame = +1 Query: 628 ELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID 807 E D +I+VG L V++ +L EL V + D T +G+GFV F + D Sbjct: 8 ERNQDATIYVGGLDEKVSESILWELMVQA-GPVVSVNMPKDRVTANHQGFGFVEFMGEED 66 Query: 808 RTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSE 987 +A+ +N + +PI++ A+ + D G + ++VG LDP V E Sbjct: 67 ADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGAN-------------IFVGNLDPEVDE 113 Query: 988 DELRKTFAKYGDVASV-KI------PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVR 1146 L TF+ +G + V KI K F+ F + ++ AL+ ++G + +A+ Sbjct: 114 KLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAIT 173 Query: 1147 LSWGRSPASKQSRGDSGHRR 1206 +S+ SK R + R Sbjct: 174 VSYAFKRDSKGERHGTAAER 193
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 73.2 bits (178), Expect = 3e-12 Identities = 68/291 (23%), Positives = 119/291 (40%), Gaps = 11/291 (3%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+ +L Y + ++ L F + E+ + G S+G ++EF + A AEK + Sbjct: 395 RTLLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFE 449 Query: 544 NFAGHVMPNTDRAFKLNWAS-------YSVGEKRSELASDHSIFVGDLAVDVTDDMLMEL 702 G + R+ L + Y G+ + ++ + +L+ T++ L E+ Sbjct: 450 EKQGTEIDG--RSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEV 507 Query: 703 FANKYRSVKGAKVIIDAN-TGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPAT 879 F K + + N G+S+GY F+ F D A+ N R IR+ Sbjct: 508 FE------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQG 561 Query: 880 PRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF---AKYGDVASVKIPVG 1050 PR SP +S ++T++V GL + +E+ L+++F + V + Sbjct: 562 PRG-------SPNARSQ---PSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSS 611 Query: 1051 KQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHR 1203 K GFV F + DA+ A + + I V L W + G G R Sbjct: 612 KGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGR 662 Score = 64.7 bits (156), Expect = 1e-09 Identities = 52/183 (28%), Positives = 83/183 (45%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E++T+ + +L Y E L F + IKV +N++ G S+GY F+EF S A++A Sbjct: 486 ESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQN-GKSKGYAFIEFASFEDAKEA 541 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKY 717 L + + RA +L G + ++FV L+ D T++ L E F Sbjct: 542 LNSCNKREIEG--RAIRLELQGPR-GSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSV 598 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 R A+++ D TG S+G+GFV F + D A M + + A P+ G Sbjct: 599 R----ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 654 Query: 898 DSG 906 G Sbjct: 655 FGG 657 Score = 58.9 bits (141), Expect = 6e-08 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 9/233 (3%) Frame = +1 Query: 478 GVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFV 657 G++ +G+V+F S EKAL+ V N + K G+ + ++ Sbjct: 346 GMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEK------PKGKDSKKERDARTLLA 399 Query: 658 GDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNG 837 +L VT D L E+F + A++ + + G+S+G ++ F + D E G Sbjct: 400 KNLPYKVTQDELKEVFED------AAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQG 453 Query: 838 MYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDST----NRTVYVGGLDPNVSEDELRKT 1005 R I + +G+ G + + +ST ++T+ + L + +E+ L++ Sbjct: 454 TEIDGRSISL------YYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEV 507 Query: 1006 FAKYGDVASVKIPV---GKQCG--FVQFINRADAEEALQGLSGSTIGKQAVRL 1149 F K +K+P GK G F++F + DA+EAL + I +A+RL Sbjct: 508 FEK---ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 557 Score = 42.0 bits (97), Expect = 0.007 Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 2/190 (1%) Frame = +1 Query: 625 SELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDI 804 +E + ++FVG+L + + L ++ + K ++D G +R +G+V F Sbjct: 303 TEPTTAFNLFVGNLNFNKSAPELKTGISDVF--AKNDLAVVDVRIGMTRKFGYVDFESAE 360 Query: 805 DRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVS 984 D A+ E+ G+ I++ G + D RT+ L V+ Sbjct: 361 DLEKAL-ELTGLKVFGNEIKL--------EKPKGKDSKKERDA----RTLLAKNLPYKVT 407 Query: 985 EDELRKTFAKYGDVASV-KIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSW-G 1158 +DEL++ F ++ V K K +++F ADAE+ + G+ I +++ L + G Sbjct: 408 QDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTG 467 Query: 1159 RSPASKQSRG 1188 ++ RG Sbjct: 468 EKGQNQDYRG 477
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 73.2 bits (178), Expect = 3e-12 Identities = 68/291 (23%), Positives = 119/291 (40%), Gaps = 11/291 (3%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+ +L Y + ++ L F + E+ + G S+G ++EF + A AEK + Sbjct: 394 RTLLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFE 448 Query: 544 NFAGHVMPNTDRAFKLNWAS-------YSVGEKRSELASDHSIFVGDLAVDVTDDMLMEL 702 G + R+ L + Y G+ + ++ + +L+ T++ L E+ Sbjct: 449 EKQGTEIDG--RSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEV 506 Query: 703 FANKYRSVKGAKVIIDAN-TGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPAT 879 F K + + N G+S+GY F+ F D A+ N R IR+ Sbjct: 507 FE------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQG 560 Query: 880 PRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF---AKYGDVASVKIPVG 1050 PR SP +S ++T++V GL + +E+ L+++F + V + Sbjct: 561 PRG-------SPNARSQ---PSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSS 610 Query: 1051 KQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHR 1203 K GFV F + DA+ A + + I V L W + G G R Sbjct: 611 KGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGR 661 Score = 64.7 bits (156), Expect = 1e-09 Identities = 52/183 (28%), Positives = 83/183 (45%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E++T+ + +L Y E L F + IKV +N++ G S+GY F+EF S A++A Sbjct: 485 ESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQN-GKSKGYAFIEFASFEDAKEA 540 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKY 717 L + + RA +L G + ++FV L+ D T++ L E F Sbjct: 541 LNSCNKREIEG--RAIRLELQGPR-GSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSV 597 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 R A+++ D TG S+G+GFV F + D A M + + A P+ G Sbjct: 598 R----ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 653 Query: 898 DSG 906 G Sbjct: 654 FGG 656 Score = 58.9 bits (141), Expect = 6e-08 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 9/233 (3%) Frame = +1 Query: 478 GVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFV 657 G++ +G+V+F S EKAL+ V N + K G+ + ++ Sbjct: 345 GMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEK------PKGKDSKKERDARTLLA 398 Query: 658 GDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNG 837 +L VT D L E+F + A++ + + G+S+G ++ F + D E G Sbjct: 399 KNLPYKVTQDELKEVFED------AAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQG 452 Query: 838 MYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDST----NRTVYVGGLDPNVSEDELRKT 1005 R I + +G+ G + + +ST ++T+ + L + +E+ L++ Sbjct: 453 TEIDGRSISL------YYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEV 506 Query: 1006 FAKYGDVASVKIPV---GKQCG--FVQFINRADAEEALQGLSGSTIGKQAVRL 1149 F K +K+P GK G F++F + DA+EAL + I +A+RL Sbjct: 507 FEK---ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 556 Score = 42.0 bits (97), Expect = 0.007 Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 2/190 (1%) Frame = +1 Query: 625 SELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDI 804 +E + ++FVG+L + + L ++ + K ++D G +R +G+V F Sbjct: 302 TEPTTAFNLFVGNLNFNKSAPELKTGISDVF--AKNDLAVVDVRIGMTRKFGYVDFESAE 359 Query: 805 DRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVS 984 D A+ E+ G+ I++ G + D RT+ L V+ Sbjct: 360 DLEKAL-ELTGLKVFGNEIKL--------EKPKGKDSKKERDA----RTLLAKNLPYKVT 406 Query: 985 EDELRKTFAKYGDVASV-KIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSW-G 1158 +DEL++ F ++ V K K +++F ADAE+ + G+ I +++ L + G Sbjct: 407 QDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTG 466 Query: 1159 RSPASKQSRG 1188 ++ RG Sbjct: 467 EKGQNQDYRG 476
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 73.2 bits (178), Expect = 3e-12 Identities = 68/291 (23%), Positives = 119/291 (40%), Gaps = 11/291 (3%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+ +L Y + ++ L F + E+ + G S+G ++EF + A AEK + Sbjct: 393 RTLLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFE 447 Query: 544 NFAGHVMPNTDRAFKLNWAS-------YSVGEKRSELASDHSIFVGDLAVDVTDDMLMEL 702 G + R+ L + Y G+ + ++ + +L+ T++ L E+ Sbjct: 448 EKQGTEIDG--RSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEV 505 Query: 703 FANKYRSVKGAKVIIDAN-TGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPAT 879 F K + + N G+S+GY F+ F D A+ N R IR+ Sbjct: 506 FE------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQG 559 Query: 880 PRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF---AKYGDVASVKIPVG 1050 PR SP +S ++T++V GL + +E+ L+++F + V + Sbjct: 560 PRG-------SPNARSQ---PSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSS 609 Query: 1051 KQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHR 1203 K GFV F + DA+ A + + I V L W + G G R Sbjct: 610 KGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGR 660 Score = 64.7 bits (156), Expect = 1e-09 Identities = 52/183 (28%), Positives = 83/183 (45%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E++T+ + +L Y E L F + IKV +N++ G S+GY F+EF S A++A Sbjct: 484 ESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQN-GKSKGYAFIEFASFEDAKEA 539 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKY 717 L + + RA +L G + ++FV L+ D T++ L E F Sbjct: 540 LNSCNKREIEG--RAIRLELQGPR-GSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSV 596 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 R A+++ D TG S+G+GFV F + D A M + + A P+ G Sbjct: 597 R----ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 652 Query: 898 DSG 906 G Sbjct: 653 FGG 655 Score = 58.9 bits (141), Expect = 6e-08 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 9/233 (3%) Frame = +1 Query: 478 GVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFV 657 G++ +G+V+F S EKAL+ V N + K G+ + ++ Sbjct: 344 GMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEK------PKGKDSKKERDARTLLA 397 Query: 658 GDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNG 837 +L VT D L E+F + A++ + + G+S+G ++ F + D E G Sbjct: 398 KNLPYKVTQDELKEVFED------AAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQG 451 Query: 838 MYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDST----NRTVYVGGLDPNVSEDELRKT 1005 R I + +G+ G + + +ST ++T+ + L + +E+ L++ Sbjct: 452 TEIDGRSISL------YYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEV 505 Query: 1006 FAKYGDVASVKIPV---GKQCG--FVQFINRADAEEALQGLSGSTIGKQAVRL 1149 F K +K+P GK G F++F + DA+EAL + I +A+RL Sbjct: 506 FEK---ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 555 Score = 42.0 bits (97), Expect = 0.007 Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 2/190 (1%) Frame = +1 Query: 625 SELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDI 804 +E + ++FVG+L + + L ++ + K ++D G +R +G+V F Sbjct: 301 TEPTTAFNLFVGNLNFNKSAPELKTGISDVF--AKNDLAVVDVRIGMTRKFGYVDFESAE 358 Query: 805 DRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVS 984 D A+ E+ G+ I++ G + D RT+ L V+ Sbjct: 359 DLEKAL-ELTGLKVFGNEIKL--------EKPKGKDSKKERDA----RTLLAKNLPYKVT 405 Query: 985 EDELRKTFAKYGDVASV-KIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSW-G 1158 +DEL++ F ++ V K K +++F ADAE+ + G+ I +++ L + G Sbjct: 406 QDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTG 465 Query: 1159 RSPASKQSRG 1188 ++ RG Sbjct: 466 EKGQNQDYRG 475
>O01671:SXL_MEGSC Sex-lethal homolog - Megaselia scalaris| Length = 321 Score = 72.8 bits (177), Expect = 4e-12 Identities = 44/148 (29%), Positives = 78/148 (52%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTD 576 M + L+S F G + T +++R+ +G S GYGFV+F S A A +A+ N G + N Sbjct: 89 MQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRN-- 146 Query: 577 RAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDAN 756 + K+++A E D +++V +L+ +TD+ L +F KY + ++ D + Sbjct: 147 KRIKVSFA-----RPGGEQLRDTNLYVTNLSRSITDEQLETIF-GKYGQIVQKNILRDKH 200 Query: 757 TGRSRGYGFVRFGDDIDRTHAMTEMNGM 840 TG RG F+RF + A++ +N + Sbjct: 201 TGTPRGVAFIRFNKREEAQEAISALNNV 228 Score = 64.7 bits (156), Expect = 1e-09 Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 7/167 (4%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++ V L D+ D L LF + +++ D TG S GYGFV FG + D Sbjct: 76 SGTNLIVNYLPQDMQDRELYSLFRT-IGPINTCRIMRDYKTGYSYGYGFVDFGSEADALR 134 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDE 993 A+ +NG+ + I++ A P G+ T +YV L ++++++ Sbjct: 135 AINNLNGITVRNKRIKVSFARP---------------GGEQLRDTNLYVTNLSRSITDEQ 179 Query: 994 LRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLS 1116 L F KYG + I K G F++F R +A+EA+ L+ Sbjct: 180 LETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALN 226 Score = 35.0 bits (79), Expect = 0.90 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%) Frame = +1 Query: 895 GDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG--- 1062 G+ S + + G + + T + V L ++ + EL F G + + +I + G Sbjct: 60 GNMANSTNSLNSGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSY 119 Query: 1063 ---FVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 FV F + ADA A+ L+G T+ + +++S+ R P +Q R Sbjct: 120 GYGFVDFGSEADALRAINNLNGITVRNKRIKVSFAR-PGGEQLR 162
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 72.0 bits (175), Expect = 7e-12 Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 7/222 (3%) Frame = +1 Query: 472 HSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSI 651 H G G G+ +F SA ++ N A + N+ +N G+ + + ++ Sbjct: 36 HRG-GRGGGYNDFSGGGSAMGSMCNMAPAISTNS-----VNSGGGDCGDNQG--CNGTNL 87 Query: 652 FVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEM 831 V L D+TD L LF + +++ D TG S GY FV F +ID +A+ + Sbjct: 88 IVNYLPQDMTDRELYALFRT-CGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSL 146 Query: 832 NGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDELRKTF 1008 NG+ + +++ A P G+S T +YV L +++DEL K F Sbjct: 147 NGVTVRNKRLKVSYARP---------------GGESIKDTNLYVTNLPRTITDDELEKIF 191 Query: 1009 AKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLS 1116 KYG++ I K G FV+F R +A+EA+ L+ Sbjct: 192 GKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 233 Score = 67.4 bits (163), Expect = 2e-10 Identities = 41/148 (27%), Positives = 78/148 (52%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTD 576 M + L++ F G + T +++++ +G S GY FV+F S A+ A+++ G + N Sbjct: 96 MTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRN-- 153 Query: 577 RAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDAN 756 + K+++A E D +++V +L +TDD L ++F KY ++ ++ D Sbjct: 154 KRLKVSYA-----RPGGESIKDTNLYVTNLPRTITDDELEKIF-GKYGNIVQKNILRDKL 207 Query: 757 TGRSRGYGFVRFGDDIDRTHAMTEMNGM 840 TG+ RG FVRF + A++ +N + Sbjct: 208 TGKPRGVAFVRFNKREEAQEAISALNNV 235
>O94621:YBKC_SCHPO Uncharacterized RNA-binding protein C1289.12 - Schizosaccharomyces| pombe (Fission yeast) Length = 352 Score = 69.3 bits (168), Expect = 4e-11 Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 10/272 (3%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTD 576 M+E+Y+ + F V + + SG +EF S +A AL+ +T Sbjct: 1 MNEDYIRAIFE---NVRKVNYYEDGESGAILKTCCIEFESQDAARNALER------QSTQ 51 Query: 577 RAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDAN 756 R N S V + + S + +F+ ++ +V+++ + LF +Y + ++ Sbjct: 52 RLISGNPISLDVVPEWQK-PSYYMLFISNIDPEVSENDIKYLF-QRYNFISAR--VLRCV 107 Query: 757 TGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTS-----GDSGTSPTT 921 G S F+ ++ D +A EM G +C R I + + + G GT Sbjct: 108 DGTSTSIAFIWLANESDIQNAQVEMQGAFCLKRSILVHSVKSDKNTYLSSPGFYGTPQPL 167 Query: 922 QSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEA 1101 D N VYV L N++ ELR F +G++ + V G + F R AE+A Sbjct: 168 NQFTDPNNTAVYVHQLPENITTQELRSYFLHFGEILYTQ--VNNNSGRIVFAQRYFAEQA 225 Query: 1102 LQGLSGSTIGKQAVRLSWGRSPA-----SKQS 1182 + ++ + ++LSW R P+ SKQS Sbjct: 226 INEMNNFPLHGVRIQLSWARPPSMALLPSKQS 257
>Q44554:RBPB_ANASP Putative RNA-binding protein rbpB - Anabaena sp. (strain PCC 7120)| Length = 103 Score = 69.3 bits (168), Expect = 4e-11 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 SI+VG+L+ DVT++ L +FA +Y SVK ++ +D TGR RG+GFV G D + T A+ Sbjct: 2 SIYVGNLSYDVTEESLNAVFA-EYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIE 60 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDS-GTSPTTQSDGDSTNR 948 ++G R +++ A PR G S G+ +S+ + NR Sbjct: 61 ALDGAEWMGRDLKVNKAKPREDRGGSRGSFGGNRSNNNFRNR 102 Score = 44.3 bits (103), Expect = 0.001 Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 7/94 (7%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQG 1110 ++YVG L +V+E+ L FA+YG V V++PV ++ GFV+ + A+ A++ Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEA 61 Query: 1111 LSGSTIGKQAVRLSWGRSPASK-QSRGDSGHRRN 1209 L G+ + ++++ + + SRG G R+ Sbjct: 62 LDGAEWMGRDLKVNKAKPREDRGGSRGSFGGNRS 95 Score = 39.7 bits (91), Expect = 0.037 Identities = 21/63 (33%), Positives = 35/63 (55%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +I+VG+L Y + E L++ F G V +++ +R +G G+GFVE S A A++ Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEA 61 Query: 547 FAG 555 G Sbjct: 62 LDG 64
>Q5R7X2:SR140_PONPY U2-associated protein SR140 - Pongo pygmaeus (Orangutan)| Length = 1028 Score = 68.6 bits (166), Expect = 7e-11 Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 9/107 (8%) Frame = +1 Query: 871 PATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI--- 1041 P+ R+S +P + GD + +Y+G ++P ++E+ L + F ++G +ASVKI Sbjct: 248 PSRRNRSSVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWP 307 Query: 1042 ------PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 + CGFV F+NR DAE AL+ L+G I ++L WG++ Sbjct: 308 RTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKA 354
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 68.6 bits (166), Expect = 7e-11 Identities = 69/270 (25%), Positives = 112/270 (41%), Gaps = 20/270 (7%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN- 546 ++V +L + L F G +V+ KV G S GYGFV+F +A A+Q Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTL 172 Query: 547 ----------FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLM 696 + G M TDR EK + L ++ +L DV++D+L Sbjct: 173 NSTIVADKEIYVGKFMKKTDRV--------KPEEKYTNL------YMKNLDADVSEDLLR 218 Query: 697 ELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 E FA ++ + + D N RGY FV F + D A +NG ++ + +G A Sbjct: 219 EKFA-EFGKIVSLAIAKDENR-LCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRA 276 Query: 877 TPRRTSGDSGTSPTTQSDGDSTN----RTVYVGGLDPNVSEDELRKTFAKYGDVASVKIP 1044 + + + +YV ++ V+E+ELRK F++ G + S K+ Sbjct: 277 QKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLM 336 Query: 1045 V-----GKQCGFVQFINRADAEEALQGLSG 1119 K GFV F +A +A++ G Sbjct: 337 CDEKGKSKGFGFVCFSTPEEAIDAVKTFHG 366 Score = 60.5 bits (145), Expect = 2e-08 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 S++VGDL VT+ +L + FA +++S+ ++ DA++GRS YG+ F D A+ Sbjct: 25 SLYVGDLHPSVTEGILYDAFA-EFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIE 83 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKT 1005 + N + + IR+ S +P + +G V+V L +V+ L+ Sbjct: 84 KKNNSLLNGKMIRV---------MWSVRAPDARRNGVG---NVFVKNLPESVTNAVLQDM 131 Query: 1006 FAKYGDVASVKIPV-----GKQCGFVQFINRADAEEALQGLSGSTIGKQAV 1143 F K+G++ S K+ + GFVQF A A+Q L+ + + + + Sbjct: 132 FKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEI 182 Score = 48.1 bits (113), Expect = 1e-04 Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 11/180 (6%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN- 546 +++ +L + E+ L F G++V++ + ++ + + GY FV F + A +A + Sbjct: 203 LYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENR-LCRGYAFVNFDNPEDARRAAETV 261 Query: 547 ----------FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLM 696 + G +R L E++ +A +I+V ++ V VT++ L Sbjct: 262 NGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELR 321 Query: 697 ELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 + F+ + ++ K++ D G+S+G+GFV F + A+ +G +P+ + A Sbjct: 322 KHFS-QCGTITSTKLMCDEK-GKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIA 379
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 68.2 bits (165), Expect = 1e-10 Identities = 45/160 (28%), Positives = 81/160 (50%) Frame = +1 Query: 361 NRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 N + V L M + L++ F G + T +++R+ +G S GY FV+F S +++A+ Sbjct: 126 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAI 185 Query: 541 QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYR 720 + G + N + K+++A E D +++V +L +TDD L +F KY Sbjct: 186 KVLNGITVRN--KRLKVSYA-----RPGGESIKDTNLYVTNLPRTITDDQLDTIF-GKYG 237 Query: 721 SVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGM 840 S+ ++ D TGR RG FVR+ + A++ +N + Sbjct: 238 SIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNV 277 Score = 61.6 bits (148), Expect = 9e-09 Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 15/202 (7%) Frame = +1 Query: 556 HVMPNTDRAFKLNWASYSVGEKRSE--------LASDHSIFVGDLAVDVTDDMLMELFAN 711 +++P T N S+G S+ +S+ ++ V L D+TD L LF Sbjct: 90 NLLPMTSNNSLSNLCGLSLGSGGSDDHMMMHDQRSSNTNLIVNYLPQDMTDRELYALF-R 148 Query: 712 KYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRT 891 + +++ D TG S GY FV F ++D A+ +NG+ + +++ A P Sbjct: 149 AIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP--- 205 Query: 892 SGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG-- 1062 G+S T +YV L +++D+L F KYG + I K G Sbjct: 206 ------------GGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRP 253 Query: 1063 ----FVQFINRADAEEALQGLS 1116 FV++ R +A+EA+ L+ Sbjct: 254 RGVAFVRYNKREEAQEAISALN 275
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 68.2 bits (165), Expect = 1e-10 Identities = 45/160 (28%), Positives = 81/160 (50%) Frame = +1 Query: 361 NRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 N + V L M + L++ F G + T +++R+ +G S GY FV+F S +++A+ Sbjct: 124 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAI 183 Query: 541 QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYR 720 + G + N + K+++A E D +++V +L +TDD L +F KY Sbjct: 184 KVLNGITVRN--KRLKVSYA-----RPGGESIKDTNLYVTNLPRTITDDQLDTIF-GKYG 235 Query: 721 SVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGM 840 S+ ++ D TGR RG FVR+ + A++ +N + Sbjct: 236 SIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNV 275 Score = 62.4 bits (150), Expect = 5e-09 Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 7/168 (4%) Frame = +1 Query: 634 ASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRT 813 AS+ ++ V L D+TD L LF + +++ D TG S GY FV F ++D Sbjct: 122 ASNTNLIVNYLPQDMTDRELYALF-RAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQ 180 Query: 814 HAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSED 990 A+ +NG+ + +++ A P G+S T +YV L +++D Sbjct: 181 RAIKVLNGITVRNKRLKVSYARP---------------GGESIKDTNLYVTNLPRTITDD 225 Query: 991 ELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLS 1116 +L F KYG + I K G FV++ R +A+EA+ L+ Sbjct: 226 QLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 273
>O15042:SR140_HUMAN U2-associated protein SR140 - Homo sapiens (Human)| Length = 1029 Score = 68.2 bits (165), Expect = 1e-10 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 13/108 (12%) Frame = +1 Query: 880 PRRTSGDSGT----SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-- 1041 P R + SG +P + GD + +Y+G ++P ++E+ L + F ++G +ASVKI Sbjct: 248 PSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMW 307 Query: 1042 -------PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 + CGFV F+NR DAE AL+ L+G I ++L WG++ Sbjct: 308 PRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKA 355
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 67.8 bits (164), Expect = 1e-10 Identities = 42/148 (28%), Positives = 77/148 (52%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTD 576 M + L++ F G + T +++++ +G S GY FV+F S A+ A++ G + N Sbjct: 113 MTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRN-- 170 Query: 577 RAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDAN 756 + K+++A E D +++V +L +TDD L ++F KY ++ ++ D Sbjct: 171 KRLKVSYA-----RPGGESIKDTNLYVTNLPRTITDDELEKIF-GKYGNIVQKNILRDKL 224 Query: 757 TGRSRGYGFVRFGDDIDRTHAMTEMNGM 840 TGR RG FVRF + A++ +N + Sbjct: 225 TGRPRGVAFVRFNKREEAQEAISALNNV 252 Score = 67.4 bits (163), Expect = 2e-10 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 7/164 (4%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++ V L D+TD L LF + +++ D TG S GY FV F +ID +A+ Sbjct: 103 NLIVNYLPQDMTDRELYALFRT-CGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 161 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDELRK 1002 +NG+ + +++ A P G+S T +YV L +++DEL K Sbjct: 162 TVNGITVRNKRLKVSYARP---------------GGESIKDTNLYVTNLPRTITDDELEK 206 Query: 1003 TFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLS 1116 F KYG++ I K G FV+F R +A+EA+ L+ Sbjct: 207 IFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALN 250
>Q6NV83:SR140_MOUSE U2-associated protein SR140 - Mus musculus (Mouse)| Length = 1029 Score = 67.4 bits (163), Expect = 2e-10 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 13/108 (12%) Frame = +1 Query: 880 PRRTSGDSGT----SPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-- 1041 P R + SG +P + GD + +Y+G ++P ++E+ L + F ++G +ASVKI Sbjct: 248 PSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMW 307 Query: 1042 -------PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 + CGFV F++R DAE AL+ L+G I ++L WGR+ Sbjct: 308 PRTDEERARERNCGFVAFMSRRDAERALKNLNGKMIMSFEMKLGWGRA 355
>P48809:RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C - Drosophila| melanogaster (Fruit fly) Length = 421 Score = 67.4 bits (163), Expect = 2e-10 Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 4/193 (2%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 DE ++VG L + + L F G+++ V++N SG S G+GFV F + Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 LQN + T N + +K + +F+G L +VT+ L F N+ Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKK----GGGYKVFLGGLPSNVTETDLRTFF-NR 118 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE----MNGMYCSTRPIRIGPATP 882 Y V ++ D +SRG+GF+ F ++ H E +NG + + I A P Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNG-----KQVEIKKAEP 173 Query: 883 RRTSGDSGTSPTT 921 R SG ++ +T Sbjct: 174 RDGSGGQNSNNST 186 Score = 60.8 bits (146), Expect = 2e-08 Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 7/170 (4%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +FVG L+ + T + L F ++ + V+ + +GRSRG+GFV F D + H + Sbjct: 9 LFVGGLSWETTQENLSRYFC-RFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVL-- 65 Query: 829 MNGMYC-STRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKT 1005 NG + R I P PR T Q V++GGL NV+E +LR Sbjct: 66 QNGPHTLDGRTIDPKPCNPR----------TLQKPKKGGGYKVFLGGLPSNVTETDLRTF 115 Query: 1006 FAKYGDVASVKIPVGKQ------CGFVQFINRADAEEALQGLSGSTIGKQ 1137 F +YG V V I ++ GF+ F + E + GKQ Sbjct: 116 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQ 165
>P09405:NUCL_MOUSE Nucleolin - Mus musculus (Mouse)| Length = 707 Score = 66.2 bits (160), Expect = 4e-10 Identities = 73/294 (24%), Positives = 117/294 (39%), Gaps = 14/294 (4%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+ +L + + E+ L F + E+ + G S+G ++EF S A AEK L+ Sbjct: 395 RTLLAKNLSFNITEDELKEVFEDAMEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLE 449 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEK--RSELASDHSIFVGD--------LAVDVTDDML 693 G + R+ L Y GEK R E S + G+ L+ T + L Sbjct: 450 EKQGAEIDG--RSVSL----YYTGEKGQRQERTGKTSTWSGESKTLVLSNLSYSATKETL 503 Query: 694 MELFANKYRSVKGAKVIIDANT-GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIG 870 E+F K + + N G+ +GY F+ F D A+ N M R IR+ Sbjct: 504 EEVFE------KATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRL- 556 Query: 871 PATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF---AKYGDVASVKI 1041 G + S ++T++V GL + +E+ L+++F + V + Sbjct: 557 -----ELQGSNSRS--------QPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRET 603 Query: 1042 PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHR 1203 K GFV F + DA+ A + + I V L W + G G R Sbjct: 604 GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGR 657 Score = 62.4 bits (150), Expect = 5e-09 Identities = 51/183 (27%), Positives = 83/183 (45%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E++T+ + +L Y + L F + IKV +N H G +GY F+EF S A++A Sbjct: 485 ESKTLVLSNLSYSATKETLEEVFE---KATFIKVPQNPH-GKPKGYAFIEFASFEDAKEA 540 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKY 717 L + + M R +L + + S+ ++FV L+ D T++ L E F Sbjct: 541 LNSC--NKMEIEGRTIRLELQGSNSRSQPSK-----TLFVKGLSEDTTEETLKESFEGSV 593 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 R A+++ D TG S+G+GFV F + D A M + + A P+ G Sbjct: 594 R----ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 649 Query: 898 DSG 906 G Sbjct: 650 FGG 652 Score = 60.8 bits (146), Expect = 2e-08 Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 6/240 (2%) Frame = +1 Query: 475 SGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIF 654 +G + +G+V+F S EKAL+ V N + K G ++ + ++ Sbjct: 345 TGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEK------PKGRDSKKVRAARTLL 398 Query: 655 VGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMN 834 +L+ ++T+D L E+F + ++ + + G+S+G ++ F + D + E Sbjct: 399 AKNLSFNITEDELKEVFED------AMEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQ 452 Query: 835 GMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAK 1014 G R + + T + T T+ G+S +T+ + L + +++ L + F K Sbjct: 453 GAEIDGRSVSL-YYTGEKGQRQERTGKTSTWSGES--KTLVLSNLSYSATKETLEEVFEK 509 Query: 1015 YGDVASVKIPVGKQCG--FVQFINRADAEEALQGLSGSTIGKQAVRL----SWGRSPASK 1176 + + P GK G F++F + DA+EAL + I + +RL S RS SK Sbjct: 510 ATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGSNSRSQPSK 569 Score = 51.2 bits (121), Expect = 1e-05 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 6/193 (3%) Frame = +1 Query: 625 SELASDHSIFVGDL----AVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 SE + ++F+G+L +V+ + ELFA K ++D TG +R +G+V F Sbjct: 303 SEPTTPFNLFIGNLNPNKSVNELKFAISELFA------KNDLAVVDVRTGTNRKFGYVDF 356 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 D A+ E+ G+ I++ R S RT+ L Sbjct: 357 ESAEDLEKAL-ELTGLKVFGNEIKLEKPKGR------------DSKKVRAARTLLAKNLS 403 Query: 973 PNVSEDELRKTFAKYGDVASVKIPVGKQCG--FVQFINRADAEEALQGLSGSTIGKQAVR 1146 N++EDEL++ F ++ V GK G +++F + ADAE+ L+ G+ I ++V Sbjct: 404 FNITEDELKEVFEDAMEIRLVS-QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVS 462 Query: 1147 LSWGRSPASKQSR 1185 L + +Q R Sbjct: 463 LYYTGEKGQRQER 475
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 65.9 bits (159), Expect = 5e-10 Identities = 40/148 (27%), Positives = 77/148 (52%) Frame = +1 Query: 397 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTD 576 M + L++ F G + T +++R+ +G S GY FV+F + +++A+++ G + N Sbjct: 121 MTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNGITVRN-- 178 Query: 577 RAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDAN 756 + K+++A E D +++V +L +TDD L +F KY + ++ D Sbjct: 179 KRLKVSYA-----RPGGESIKDTNLYVTNLPRTITDDQLDTIF-GKYGMIVQKNILRDKL 232 Query: 757 TGRSRGYGFVRFGDDIDRTHAMTEMNGM 840 TG+ RG FVRF + A++ +N + Sbjct: 233 TGKPRGVAFVRFNKREEAQEAISALNNV 260 Score = 59.7 bits (143), Expect = 3e-08 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 7/164 (4%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++ V L D+TD L LF + +++ D TG S GY FV F + D A+ Sbjct: 111 NLIVNYLPQDMTDRELYALFRT-IGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIK 169 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDELRK 1002 +NG+ + +++ A P G+S T +YV L +++D+L Sbjct: 170 SLNGITVRNKRLKVSYARP---------------GGESIKDTNLYVTNLPRTITDDQLDT 214 Query: 1003 TFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGLS 1116 F KYG + I K G FV+F R +A+EA+ L+ Sbjct: 215 IFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 258
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 65.9 bits (159), Expect = 5e-10 Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 2/199 (1%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E+ +++G L + E+ L FG G V +K++++ +G S G+GF+ F +S ++ Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216 Query: 538 L--QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFAN 711 + Q+ + + RA R E IFVG + DV E F+ Sbjct: 217 VKTQHILDGKVIDPKRAIP-----------RDEQDKTGKIFVGGIGPDVRPKEFEEFFS- 264 Query: 712 KYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRT 891 ++ ++ A++++D +TG+SRG+GFV + D D + + + R I I A PR Sbjct: 265 QWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNKFIDFKDRKIEIKRAEPRHM 323 Query: 892 SGDSGTSPTTQSDGDSTNR 948 S + + G++ NR Sbjct: 324 QQKSSNN-GGNNGGNNMNR 341 Score = 57.4 bits (137), Expect = 2e-07 Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 1/139 (0%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L D T+D L E F KY +V K++ D TGRSRG+GF+ F ++ ++ E Sbjct: 161 MFIGGLNWDTTEDNLREYFG-KYGTVTDLKIMKDPATGRSRGFGFLSF----EKPSSVDE 215 Query: 829 MNGMYCSTRPIRIGPA-TPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKT 1005 + T+ I G P+R + + D T + ++VGG+ P+V E + Sbjct: 216 V----VKTQHILDGKVIDPKRA--------IPRDEQDKTGK-IFVGGIGPDVRPKEFEEF 262 Query: 1006 FAKYGDVASVKIPVGKQCG 1062 F+++G + ++ + K G Sbjct: 263 FSQWGTIIDAQLMLDKDTG 281 Score = 35.4 bits (80), Expect = 0.69 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%) Frame = +1 Query: 919 TQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI----PVGKQCGF 1065 +++D + +++GGL+ + +ED LR+ F KYG V +KI G+ GF Sbjct: 150 SKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGF 202
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 65.9 bits (159), Expect = 5e-10 Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 5/93 (5%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ D L + FA+ + V AKVI+D TGRSRG+GFV F D+ T A++E Sbjct: 37 LFIGGLSWGTDDASLRDAFAH-FGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 829 MNGMYCSTRPIRIGPA-----TPRRTSGDSGTS 912 M+G + R IR+ PA PR G G S Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPRAYGGGGGYS 128 Score = 44.7 bits (104), Expect = 0.001 Identities = 22/62 (35%), Positives = 33/62 (53%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L + D+ L F G+VV KVI +R +G S G+GFV F +A A+ Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96 Query: 550 AG 555 G Sbjct: 97 DG 98 Score = 42.0 bits (97), Expect = 0.007 Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 9/114 (7%) Frame = +1 Query: 883 RRTSGDSGTSPTTQSDGDST--NRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQ 1056 R+ +G P T G + +++GGL + LR FA +GDV K+ V ++ Sbjct: 12 RQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRE 71 Query: 1057 C------GFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRS-PASKQSRGDSG 1197 GFV F + A A+ + G + + +R++ P++ ++ G G Sbjct: 72 TGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPRAYGGGG 125
>P39684:PES4_YEAST Protein PES4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 611 Score = 65.5 bits (158), Expect = 6e-10 Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 8/173 (4%) Frame = +1 Query: 613 GEKRSELASDHS-----IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGY 777 G K +L S S +F+GDL VT++ L +F KY S AKV +D+ T +S G+ Sbjct: 76 GHKNGKLKSFESKKLVPLFIGDLHETVTEETLKGIF-KKYPSFVSAKVCLDSVTKKSLGH 134 Query: 778 GFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVY 957 G++ F D + AM E+N + + IRI P+ TT TN V+ Sbjct: 135 GYLNFEDKEEAEKAMEELNYTKVNGKEIRIMPSLRN----------TTFRKNFGTN--VF 182 Query: 958 VGGL---DPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQ 1107 L +P ++ TF++YG + S K+ K GFV F + A ++ Sbjct: 183 FSNLPLNNPLLTTRVFYDTFSRYGKILSCKLDSRKDIGFVYFEDEKTARNVIK 235
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 64.7 bits (156), Expect = 1e-09 Identities = 52/182 (28%), Positives = 86/182 (47%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 +++ TI++G+L + ++ L +G VV I + R+R G+GF EF E Sbjct: 8 NQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEY 67 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 A Q + + + ++N AS G A+ +FVG+L V + +L + F+ Sbjct: 68 ACQIL--NQVKLFGKPIRVNRASQDRGVNTLIGAN---LFVGNLDPLVDERVLYDTFSAL 122 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTS 894 + VK +V D N GRS+GYGFV + A+ MN + +PI + A R Sbjct: 123 GQLVKAPQVARDEN-GRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGK 181 Query: 895 GD 900 G+ Sbjct: 182 GE 183 Score = 53.9 bits (128), Expect = 2e-06 Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 9/204 (4%) Frame = +1 Query: 622 RSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 801 R + D +I++G+L VTD +L EL V + D G+GF F + Sbjct: 4 REDRNQDATIYLGNLDEKVTDSILFELCLQA-GPVVNIHIPRDRVRNSHNGFGFCEFLHE 62 Query: 802 IDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNV 981 D +A +N + +PIR+ R S D G + ++ ++VG LDP V Sbjct: 63 QDVEYACQILNQVKLFGKPIRVN-----RASQDRGVNTLIGAN-------LFVGNLDPLV 110 Query: 982 SEDELRKTFAKYGDVASVKIPV--------GKQCGFVQFINRADAEEALQGLSGSTIGKQ 1137 E L TF+ G + VK P K GFV + + A+ A++ ++ + + Sbjct: 111 DERVLYDTFSALGQL--VKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNK 168 Query: 1138 AVRLSWGRSPASKQSR-GDSGHRR 1206 + +S+ K R GD R+ Sbjct: 169 PITVSYAFKREGKGERHGDIAERK 192 Score = 43.9 bits (102), Expect = 0.002 Identities = 23/89 (25%), Positives = 43/89 (48%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VG+L +DE L+ F G++V + +G S+GYGFV + S +A+ A++ Sbjct: 101 LFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAM 160 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELA 636 + N + GE+ ++A Sbjct: 161 NNQFLMNKPITVSYAFKREGKGERHGDIA 189
>Q44560:RBPA_ANASP Putative RNA-binding protein rbpA - Anabaena sp. (strain PCC 7120)| Length = 102 Score = 64.7 bits (156), Expect = 1e-09 Identities = 35/101 (34%), Positives = 55/101 (54%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 SI+VG+L+ +VT D L +FA +Y +VK ++ D TG+ RG+GFV G + + A+ Sbjct: 2 SIYVGNLSYEVTQDTLSAVFA-EYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIE 60 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNR 948 ++G R +++ A PR G SG + G NR Sbjct: 61 ALDGAEWMGRDLKVNKAKPREDRGPSGGNRGGYGGGGGRNR 101 Score = 44.3 bits (103), Expect = 0.001 Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQG 1110 ++YVG L V++D L FA+YG V V++P ++ GFV+ + A+ A++ Sbjct: 2 SIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEA 61 Query: 1111 LSGSTIGKQAVRLSWGRSPASKQSRGDSGHRR 1206 L G+ + ++++ + ++ RG SG R Sbjct: 62 LDGAEWMGRDLKVNKAK---PREDRGPSGGNR 90 Score = 40.0 bits (92), Expect = 0.028 Identities = 20/63 (31%), Positives = 35/63 (55%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +I+VG+L Y + ++ L + F G V +++ +R +G G+GFVE S A A++ Sbjct: 2 SIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEA 61 Query: 547 FAG 555 G Sbjct: 62 LDG 64
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 64.7 bits (156), Expect = 1e-09 Identities = 65/275 (23%), Positives = 126/275 (45%), Gaps = 7/275 (2%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGP--SGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 531 E +I++G+L + + L S + +TI+ IR G S+ +G+V+F S E Sbjct: 231 EGLSIFIGNLNSTKEFDELKDALREFFSKKNLTIQDIR---IGNSKKFGYVDFSSEEEVE 287 Query: 532 KALQNFAGHVMPNTDRAFK-LNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFA 708 KAL+ ++ + K + + E + E S ++FV ++ T + L E+F Sbjct: 288 KALKLTGKKILGTEVKIEKAMAFDKNKTAENKKERDS-RTLFVKNIPYSTTVEELQEIFE 346 Query: 709 NKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRR 888 N + ++ I G ++G +V F ++ + A+ E G R I + + Sbjct: 347 NA-KDIR----IPTGKDGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDFTGEKS 401 Query: 889 TSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV----GKQ 1056 + + P +GDS + + V L + +ED LR+ F K S++IP K Sbjct: 402 QNSGNKKGP----EGDS--KVLVVNNLSYSATEDSLREVFEK---ATSIRIPQNQGRAKG 452 Query: 1057 CGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGR 1161 F++F + DA++A+ + + I +++RL + + Sbjct: 453 FAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQ 487 Score = 57.0 bits (136), Expect = 2e-07 Identities = 44/183 (24%), Positives = 80/183 (43%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 +++ + V +L Y E+ L F + +I++ +N+ G ++G+ F+EF S A+ A Sbjct: 413 DSKVLVVNNLSYSATEDSLREVFE---KATSIRIPQNQ--GRAKGFAFIEFSSAEDAKDA 467 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKY 717 + + + + + G R A ++FV L+ D T++ L E F Sbjct: 468 MDSCNNTEIEGRSIRLEFSQGGGPQGGGRGGSAQSKTLFVRGLSEDTTEETLKEAFDGSV 527 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 A+++ D +TG S+G+GFV F D A M + + A P+ S Sbjct: 528 N----ARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAKPKGDSQ 583 Query: 898 DSG 906 G Sbjct: 584 RGG 586 Score = 32.3 bits (72), Expect = 5.9 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 5/75 (6%) Frame = +1 Query: 919 TQSDGDSTNRTVYVGGLDPNVSEDE----LRKTFAKYG-DVASVKIPVGKQCGFVQFINR 1083 T++D S ++++G L+ DE LR+ F+K + ++I K+ G+V F + Sbjct: 224 TKTDTASEGLSIFIGNLNSTKEFDELKDALREFFSKKNLTIQDIRIGNSKKFGYVDFSSE 283 Query: 1084 ADAEEALQGLSGSTI 1128 + E+AL+ L+G I Sbjct: 284 EEVEKALK-LTGKKI 297
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 63.9 bits (154), Expect = 2e-09 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 13/176 (7%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD-------ID 807 +FVG L T + L F+ +Y V ++ D T +SRG+GFV+F D Sbjct: 12 LFVGGLDWSTTQETLRSYFS-QYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 808 RTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSE 987 R H + +G +P P RT G +SD +N+ ++VGG+ N E Sbjct: 71 RPHTL---DGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNK-IFVGGIPHNCGE 126 Query: 988 DELRKTFAKYGDVASVKIPVGKQ------CGFVQFINRADAEEALQGLSGSTIGKQ 1137 ELR+ F K+G V V + + GF+ F + ++A+ +GK+ Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKK 182 Score = 56.6 bits (135), Expect = 3e-07 Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 10/197 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSH----- 519 DE ++VG L + + L S F GEVV +++++ + S G+GFV+F Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66 Query: 520 --ASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEK---RSELASDHSIFVGDLAVDVTD 684 AS L P T R + G + RS+ + + IFVG + + + Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGE 126 Query: 685 DMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIR 864 L E F K+ V +I DA R RG+GF+ F D+ A+ M+ + + Sbjct: 127 TELREYF-KKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVE 184 Query: 865 IGPATPRRTSGDSGTSP 915 + A PR + + P Sbjct: 185 VKRAEPRDSKNQAPGQP 201
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 63.9 bits (154), Expect = 2e-09 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 13/176 (7%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD-------ID 807 +FVG L T + L F+ +Y V ++ D T +SRG+GFV+F D Sbjct: 12 LFVGGLDWSTTQETLRSYFS-QYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 808 RTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSE 987 R H + +G +P P RT G +SD +N+ ++VGG+ N E Sbjct: 71 RPHTL---DGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNK-IFVGGIPHNCGE 126 Query: 988 DELRKTFAKYGDVASVKIPVGKQ------CGFVQFINRADAEEALQGLSGSTIGKQ 1137 ELR+ F K+G V V + + GF+ F + ++A+ +GK+ Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKK 182 Score = 56.2 bits (134), Expect = 4e-07 Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 10/197 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSH----- 519 DE ++VG L + + L S F GEVV +++++ + S G+GFV+F Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66 Query: 520 --ASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEK---RSELASDHSIFVGDLAVDVTD 684 AS L P T R + G + RS+ + + IFVG + + + Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126 Query: 685 DMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIR 864 L E F K+ V +I DA R RG+GF+ F D+ A+ M+ + + Sbjct: 127 TELREYF-KKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVE 184 Query: 865 IGPATPRRTSGDSGTSP 915 + A PR + + P Sbjct: 185 VKRAEPRDSKSQAPGQP 201
>Q7ZXB5:RBM22_XENLA Pre-mRNA-splicing factor RBM22 - Xenopus laevis (African clawed frog)| Length = 417 Score = 63.2 bits (152), Expect = 3e-09 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D + T+YVGGL +SE ELR F ++G++ ++ + +QC F+QF Sbjct: 217 ASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASK 1176 R AE A + + + + + + WGRS A++ Sbjct: 277 RQSAETAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>Q6NZZ9:RBM22_DANRE Pre-mRNA-splicing factor RBM22 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 425 Score = 63.2 bits (152), Expect = 3e-09 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 1/93 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D + T+Y+GGL NV++ ELR F ++G++ ++ I +QC F+QF Sbjct: 217 ASTMPRLDVPDDKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASK 1176 R AE A + + I + + + WGRS A++ Sbjct: 277 RQAAETAAEKSFNKLIINGRRLNVKWGRSQAAR 309
>Q5NVC8:CELF4_PONPY CUG-BP- and ETR-3-like factor 4 - Pongo pygmaeus (Orangutan)| Length = 486 Score = 62.8 bits (151), Expect = 4e-09 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 11/189 (5%) Frame = +1 Query: 589 LNWASYSVGEKRSELASDHS---IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 +N S+S G + DH +F+G + ++ + L LF ++ + V+ D T Sbjct: 33 MNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF-EEFGKIYELTVLKDRFT 91 Query: 760 GRSRGYGFVRFGDD---IDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSD 930 G +G F+ + + + A+ E + RPI++ PA G S D Sbjct: 92 GMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQD 151 Query: 931 GDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVG-----KQCGFVQFINRADAE 1095 R ++VG L+ SED++R+ F +G++ I G K C FV++ + A+A+ Sbjct: 152 -----RKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQ 206 Query: 1096 EALQGLSGS 1122 A+ L GS Sbjct: 207 AAINALHGS 215
>Q7TSY6:CELF4_MOUSE CUG-BP- and ETR-3-like factor 4 - Mus musculus (Mouse)| Length = 486 Score = 62.8 bits (151), Expect = 4e-09 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 11/189 (5%) Frame = +1 Query: 589 LNWASYSVGEKRSELASDHS---IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 +N S+S G + DH +F+G + ++ + L LF ++ + V+ D T Sbjct: 33 MNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF-EEFGKIYELTVLKDRFT 91 Query: 760 GRSRGYGFVRFGDD---IDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSD 930 G +G F+ + + + A+ E + RPI++ PA G S D Sbjct: 92 GMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQD 151 Query: 931 GDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVG-----KQCGFVQFINRADAE 1095 R ++VG L+ SED++R+ F +G++ I G K C FV++ + A+A+ Sbjct: 152 -----RKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQ 206 Query: 1096 EALQGLSGS 1122 A+ L GS Sbjct: 207 AAINALHGS 215
>Q9BZC1:CELF4_HUMAN CUG-BP- and ETR-3-like factor 4 - Homo sapiens (Human)| Length = 486 Score = 62.8 bits (151), Expect = 4e-09 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 11/189 (5%) Frame = +1 Query: 589 LNWASYSVGEKRSELASDHS---IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 +N S+S G + DH +F+G + ++ + L LF ++ + V+ D T Sbjct: 33 MNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF-EEFGKIYELTVLKDRFT 91 Query: 760 GRSRGYGFVRFGDD---IDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSD 930 G +G F+ + + + A+ E + RPI++ PA G S D Sbjct: 92 GMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQD 151 Query: 931 GDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVG-----KQCGFVQFINRADAE 1095 R ++VG L+ SED++R+ F +G++ I G K C FV++ + A+A+ Sbjct: 152 -----RKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQ 206 Query: 1096 EALQGLSGS 1122 A+ L GS Sbjct: 207 AAINALHGS 215
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 62.4 bits (150), Expect = 5e-09 Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 6/191 (3%) Frame = +1 Query: 598 ASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGY 777 +S S S+ ++VG++ ++ +D L + ++ +++ A+V+ D +GRSR + Sbjct: 69 SSSSTASSSSDGEGARRLYVGNIPRNLNNDELRTI-VEEHGAIEIAEVMYDKYSGRSRRF 127 Query: 778 GFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVY 957 GFV D + ++N R I++ D T+ S + VY Sbjct: 128 GFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYKVY 187 Query: 958 VGGLDPNVSEDELRKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSG 1119 +G L V+ + L+ F++ G V K+ GFV F + + E A+Q L+ Sbjct: 188 IGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNN 247 Query: 1120 STIGKQAVRLS 1152 S + Q +R++ Sbjct: 248 SVLEGQKIRVN 258 Score = 58.9 bits (141), Expect = 6e-08 Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 9/180 (5%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 R ++VG++ ++ + L + G + +V+ +++SG S +GFV + A ++ Sbjct: 84 RRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIE 143 Query: 544 NFAGHVMPNTDRAFKLNWASYSV---------GEKRSELASDHSIFVGDLAVDVTDDMLM 696 + R K+N + E + S + +++G+LA VT+++L Sbjct: 144 KLNDTEIGG--RKIKVNITEKPLEGMDIATTQAEDSQFVESPYKVYIGNLAKTVTNELLK 201 Query: 697 ELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPA 876 + F+ K + V GAKV T +S G+GFV F + + A+ +N + IR+ A Sbjct: 202 DFFSEKGK-VLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRVNKA 260 Score = 41.2 bits (95), Expect = 0.013 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 8/115 (6%) Frame = +1 Query: 847 STRP--IRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYG 1020 ST P +++ TS S S + SDG+ R +YVG + N++ DELR ++G Sbjct: 52 STNPPLLKVRAVVTEETSSSSTAS--SSSDGEGARR-LYVGNIPRNLNNDELRTIVEEHG 108 Query: 1021 DVASVKIPVGK------QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSP 1167 + ++ K + GFV DA ++ L+ + IG + ++++ P Sbjct: 109 AIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKP 163
>Q5ZM16:RBM22_CHICK Pre-mRNA-splicing factor RBM22 - Gallus gallus (Chicken)| Length = 420 Score = 62.4 bits (150), Expect = 5e-09 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D T T+YVGGL ++E +LR F ++G++ ++ + +QC F+QF Sbjct: 217 ASTMPRLDPPDDKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASKQSRGD 1191 R AE A + + + + + + WGRS A++ D Sbjct: 277 RQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKD 314
>Q6P616:RBM22_XENTR Pre-mRNA-splicing factor RBM22 - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 417 Score = 62.0 bits (149), Expect = 7e-09 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D + T+YVGGL +SE ELR F ++G++ ++ + +QC F+QF Sbjct: 217 ASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASK 1176 R AE A + + + + + + WGRS A++ Sbjct: 277 RQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>Q4V7D7:RBM22_RAT Pre-mRNA-splicing factor RBM22 - Rattus norvegicus (Rat)| Length = 420 Score = 61.2 bits (147), Expect = 1e-08 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D T T+YVGGL ++E +LR F ++G++ +V + +QC F+QF Sbjct: 217 ASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASK 1176 R AE A + + + + + + WGRS A++ Sbjct: 277 RQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>Q5RAY5:RBM22_PONPY Pre-mRNA-splicing factor RBM22 - Pongo pygmaeus (Orangutan)| Length = 420 Score = 60.8 bits (146), Expect = 2e-08 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D T T+YVGGL ++E +LR F ++G++ ++ + +QC F+QF Sbjct: 217 ASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASK 1176 R AE A + + + + + + WGRS A++ Sbjct: 277 RQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>Q8BHS3:RBM22_MOUSE Pre-mRNA-splicing factor RBM22 - Mus musculus (Mouse)| Length = 420 Score = 60.8 bits (146), Expect = 2e-08 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D T T+YVGGL ++E +LR F ++G++ ++ + +QC F+QF Sbjct: 217 ASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASK 1176 R AE A + + + + + + WGRS A++ Sbjct: 277 RQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>Q4R4J1:RBM22_MACFA Pre-mRNA-splicing factor RBM22 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 420 Score = 60.8 bits (146), Expect = 2e-08 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D T T+YVGGL ++E +LR F ++G++ ++ + +QC F+QF Sbjct: 217 ASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASK 1176 R AE A + + + + + + WGRS A++ Sbjct: 277 RQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>Q9NW64:RBM22_HUMAN Pre-mRNA-splicing factor RBM22 - Homo sapiens (Human)| Length = 420 Score = 60.8 bits (146), Expect = 2e-08 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D T T+YVGGL ++E +LR F ++G++ ++ + +QC F+QF Sbjct: 217 ASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASK 1176 R AE A + + + + + + WGRS A++ Sbjct: 277 RQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>Q3B7L8:RBM22_BOVIN Pre-mRNA-splicing factor RBM22 - Bos taurus (Bovine)| Length = 420 Score = 60.8 bits (146), Expect = 2e-08 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFIN 1080 + T P D T T+YVGGL ++E +LR F ++G++ ++ + +QC F+QF Sbjct: 217 ASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFAT 276 Query: 1081 RADAEEALQ-GLSGSTIGKQAVRLSWGRSPASK 1176 R AE A + + + + + + WGRS A++ Sbjct: 277 RQAAEVAAEKSFNKFIVNGRRLNVKWGRSQAAR 309
>P38760:YHH5_YEAST Uncharacterized RNA-binding protein YHR015W - Saccharomyces| cerevisiae (Baker's yeast) Length = 659 Score = 60.1 bits (144), Expect = 3e-08 Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 3/181 (1%) Frame = +1 Query: 574 DRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDA 753 ++ F+ A SV + ++ + +S+F+G+L VT++ML ++F +Y+S + AKV D Sbjct: 88 EQVFEKTVAKGSVQKYITKTSKTNSLFIGNLKSTVTEEMLRKIF-KRYQSFESAKVCRDF 146 Query: 754 NTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDG 933 T +S GYG++ F D D A E N + ++I P+ T Sbjct: 147 LTKKSLGYGYLNFKDKNDAESARKEFNYTVFFGQEVKIMPSMKN----------TLFRKN 196 Query: 934 DSTNRTVYVGGL---DPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEAL 1104 TN V+ L +P ++ +YG+V S + K GFV F N A + Sbjct: 197 IGTN--VFFSNLPLENPQLTTRSFYLIMIEYGNVLSCLLERRKNIGFVYFDNDISARNVI 254 Query: 1105 Q 1107 + Sbjct: 255 K 255 Score = 37.7 bits (86), Expect = 0.14 Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 9/189 (4%) Frame = +1 Query: 625 SELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDI 804 S+ A +I V +L D T + +++ F+ +K V I + FV + ++ Sbjct: 307 SDNARSKTILVKNLPSDTTQEEVLDYFST-IGPIKS--VFISEKQANTPHKAFVTYKNEE 363 Query: 805 DRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVS 984 + A +N I +GP + GT+ T+ VY+ L N + Sbjct: 364 ESKKAQKCLNKTIFKNHTIWVGPGKDKPVHNQIGTNKKTK---------VYLKNLSFNCN 414 Query: 985 ---------EDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQ 1137 ++++R + K + S+ CG V+ +R+DAE L IG Sbjct: 415 KEFISQLCLQEKIRFSEIKITNYNSLNWTF---CGHVECFSRSDAERLFNILDRRLIGSS 471 Query: 1138 AVRLSWGRS 1164 V SW ++ Sbjct: 472 LVEASWSKN 480
>Q99020:ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B - Mus musculus (Mouse)| Length = 285 Score = 60.1 bits (144), Expect = 3e-08 Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 4/211 (1%) Frame = +1 Query: 448 TIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRS 627 T N H EG VE + A+A A G T + N A Sbjct: 12 TTGATENGHEAAPEGEAPVEPSAAAAAPAASAGSGGGT--TTAPSGNQNGAEGDQINASK 69 Query: 628 ELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID 807 +FVG L+ D + L + F K+ V + +D NTGRSRG+GF+ F D Sbjct: 70 NEEDAGKMFVGGLSWDTSKKDLKDYFT-KFGEVVDCTIKMDPNTGRSRGFGFILFKD--- 125 Query: 808 RTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSE 987 S+ ++ R G + + ++VGGL+P +E Sbjct: 126 -------------SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATE 172 Query: 988 DELRKTFAKYGDVASVKIPV----GKQCGFV 1068 +++R+ F ++G++ ++++P+ K+ GFV Sbjct: 173 EKIREYFGQFGEIEAIELPIDPKLNKRRGFV 203 Score = 47.0 bits (110), Expect = 2e-04 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 5/149 (3%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL--- 540 ++VG L + + L F GEVV + + ++G S G+GF+ F +S EK L Sbjct: 77 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQK 136 Query: 541 -QNFAGHVM-PNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 G V+ P A K + IFVG L + T++ + E F + Sbjct: 137 EHRLDGRVIDPKKAMAMKKDPVK--------------KIFVGGLNPEATEEKIREYF-GQ 181 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDD 801 + ++ ++ ID + RG+ F+ F ++ Sbjct: 182 FGEIEAIELPIDPKLNKRRGFVFITFKEE 210 Score = 34.7 bits (78), Expect = 1.2 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 20/97 (20%) Frame = +1 Query: 874 ATPRRTSGDSGTSPTTQS------DGDSTNRT--------VYVGGLDPNVSEDELRKTFA 1011 A P ++G G + T S +GD N + ++VGGL + S+ +L+ F Sbjct: 37 AAPAASAGSGGGTTTAPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFT 96 Query: 1012 KYGDVASVKIPV------GKQCGFVQFINRADAEEAL 1104 K+G+V I + + GF+ F + + E+ L Sbjct: 97 KFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVL 133
>Q22037:ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 - Caenorhabditis elegans| Length = 346 Score = 60.1 bits (144), Expect = 3e-08 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 8/172 (4%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 R I+VG L ++ + + GE+ I V+R+ + S G+GFV F + A++ Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSEL-ASDHSIFVGDLAVDVTDDMLMELFANKYR 720 H++ + A + RSE S ++V + D T+DML E F KY Sbjct: 83 Q-RPHIIDG--KTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF-TKYG 138 Query: 721 SVKGAKVIIDANTGRSRGYGFVRFGDD-------IDRTHAMTEMNGMYCSTR 855 +V +++I+D T + RG+GFV F D + ++H +NG C R Sbjct: 139 TVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHM---VNGHRCDVR 187 Score = 58.2 bits (139), Expect = 1e-07 Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 8/172 (4%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G+ E + IFVG L + TDD++ E F +++ + V+ D T RSRG+GFV F Sbjct: 13 GDASLEPENLRKIFVGGLTSNTTDDLMRE-FYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPAT--PRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 + AM + RP I T P+R +S+ + + + +YV G Sbjct: 72 SGKTEVDAAMKQ--------RPHIIDGKTVDPKRA---VPRDDKNRSESNVSTKRLYVSG 120 Query: 967 LDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEAL 1104 + + +ED L + F KYG V +I + K GFV F + ++ + Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White| mustard) (Brassica hirta) Length = 166 Score = 60.1 bits (144), Expect = 3e-08 Identities = 35/89 (39%), Positives = 47/89 (52%) Frame = +1 Query: 640 DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHA 819 ++ FVG LA TDD +E ++Y V +K+I D TGRSRG+GFV F D+ A Sbjct: 7 EYRCFVGGLAW-ATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDA 65 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 + MNG R I + A R + G G Sbjct: 66 IEGMNGQDLDGRSITVNEAQSRGSGGGGG 94 Score = 45.4 bits (106), Expect = 7e-04 Identities = 22/61 (36%), Positives = 34/61 (55%) Frame = +1 Query: 373 WVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFA 552 +VG L + D+ L + F GEV+ K+I +R +G S G+GFV F S + A++ Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 553 G 555 G Sbjct: 71 G 71 Score = 37.0 bits (84), Expect = 0.24 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Frame = +1 Query: 955 YVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLS 1116 +VGGL + L F++YG+V KI ++ GFV F + ++A++G++ Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 1117 GSTIGKQAVRLSWGRSPASKQSRGDSG 1197 G + +++ ++ QSRG G Sbjct: 71 GQDLDGRSITVN------EAQSRGSGG 91
>P26368:U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit - Homo sapiens (Human)| Length = 475 Score = 59.3 bits (142), Expect = 4e-08 Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 35/226 (15%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S H +F+G L + DD + EL + + +K ++ D+ TG S+GY F + D Sbjct: 257 SAHKLFIGGLPNYLNDDQVKELLTS-FGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQ 315 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDST-------NRTVYVGG--- 966 A+ +NGM + + + A+ + + P+T + T + V +GG Sbjct: 316 AIAGLNGMQLGDKKLLVQRASVGAKNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPT 375 Query: 967 --------------LDPNVSE---DELRKTFAKYGDVASVKIPVGKQ------CG--FVQ 1071 LD E +++R +KYG V S++IP CG FV+ Sbjct: 376 EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVE 435 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHRRN 1209 F + D ++A+QGL+G + V +K DS HRR+ Sbjct: 436 FTSVFDCQKAMQGLTGRKFANRVV--------VTKYCDPDSYHRRD 473
>P26369:U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit - Mus musculus (Mouse)| Length = 475 Score = 58.9 bits (141), Expect = 6e-08 Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 35/226 (15%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S H +F+G L + DD + EL + + +K ++ D+ TG S+GY F + D Sbjct: 257 SAHKLFIGGLPNYLNDDQVKELLTS-FGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQ 315 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDST-------NRTVYVGG--- 966 A+ +NGM + + + A+ + + P+T + T + V +GG Sbjct: 316 AIAGLNGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQVPGLMSSQVQMGGHPT 375 Query: 967 --------------LDPNVSE---DELRKTFAKYGDVASVKIPVGKQ------CG--FVQ 1071 LD E +++R +KYG V S++IP CG FV+ Sbjct: 376 EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVE 435 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHRRN 1209 F + D ++A+QGL+G + V +K DS HRR+ Sbjct: 436 FTSVFDCQKAMQGLTGRKFANRVV--------VTKYCDPDSYHRRD 473
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 58.9 bits (141), Expect = 6e-08 Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 11/204 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSH----- 519 DE ++VG L + + L S F GEVV +++++ + S G+GFV+F Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66 Query: 520 --ASAEKALQNFAGHVMPNTDRAFKLNWASYSVG----EKRSELASDHSIFVGDLAVDVT 681 AS L P T R + + G E R+E + + IFVG + + Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCG 126 Query: 682 DDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPI 861 + L E F N++ V +I DA R RG+GF+ F D+ A+ M+ + + Sbjct: 127 ETELKEYF-NRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKV 184 Query: 862 RIGPATPRRTSGDSGTSPTTQSDG 933 + A PR + + P + G Sbjct: 185 EVKRAEPRDSKSQTPGPPGSNQWG 208 Score = 56.6 bits (135), Expect = 3e-07 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD-------ID 807 +FVG L T + L F+ +Y V ++ D T +SRG+GFV+F D Sbjct: 12 LFVGGLDWSTTQETLRSYFS-QYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 808 RTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSE 987 R H + N P + P R G P T++ S + ++VGG+ N E Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTEN---SRSNKIFVGGIPHNCGE 127 Query: 988 DELRKTFAKYGDVASVKIPVGKQ------CGFVQFINRADAEEALQGLSGSTIGKQ 1137 EL++ F ++G V V + + GF+ F + ++A+ +GK+ Sbjct: 128 TELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKK 183
>Q4R535:CELF4_MACFA CUG-BP- and ETR-3-like factor 4 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 474 Score = 58.9 bits (141), Expect = 6e-08 Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 11/189 (5%) Frame = +1 Query: 589 LNWASYSVGEKRSELASDHS---IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 +N S+S G + DH +F+G + ++ + L LF ++ + V+ D T Sbjct: 33 MNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF-EEFGKIYELTVLKDRFT 91 Query: 760 GRSRGYGFVRFGDD---IDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSD 930 G +G F+ + + + A+ E + RPI++ PA ++S Sbjct: 92 GMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPAD-------------SESR 138 Query: 931 GDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVG-----KQCGFVQFINRADAE 1095 GD R ++VG L+ SED++R+ F +G++ I G K C FV++ + A+A+ Sbjct: 139 GD---RKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQ 195 Query: 1096 EALQGLSGS 1122 A+ L GS Sbjct: 196 AAINALHGS 204
>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)| Length = 344 Score = 58.5 bits (140), Expect = 8e-08 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 2/141 (1%) Frame = +1 Query: 640 DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF--GDDIDRT 813 D +FVG L+ + T+ L + F KY ++ V D TGRSRG+ F+ F + ID+ Sbjct: 55 DRKLFVGGLSWETTEKELRDHFG-KYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113 Query: 814 HAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDE 993 A E I P++ G ++VGGL +S++E Sbjct: 114 SAADE--------HIINSKKVDPKKAKARHG--------------KIFVGGLTTEISDEE 151 Query: 994 LRKTFAKYGDVASVKIPVGKQ 1056 ++ F ++G++ V++P KQ Sbjct: 152 IKTYFGQFGNIVEVEMPFDKQ 172 Score = 44.7 bits (104), Expect = 0.001 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 15/101 (14%) Frame = +1 Query: 823 TEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTN---------RTVYVGGLDP 975 TE+NG + GP + +GD+G + +T D+ + R ++VGGL Sbjct: 9 TEINGEDFTKDVTADGPGSE---NGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLSW 65 Query: 976 NVSEDELRKTFAKYGDVASVKIPVGKQCG------FVQFIN 1080 +E ELR F KYG++ S+ + Q G F+ F N Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTN 106
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 58.5 bits (140), Expect = 8e-08 Identities = 57/241 (23%), Positives = 92/241 (38%), Gaps = 65/241 (26%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFV-------------EF 510 ++VG+L + +D L F +G V ++VI ++ +G S G+GFV +F Sbjct: 101 LFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQF 160 Query: 511 YSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKR---------------------- 624 + + L+ AG P + +F S G +R Sbjct: 161 NGYEFEGRPLRVNAGPPPPKREESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGS 220 Query: 625 ------------------------------SELASDHSIFVGDLAVDVTDDMLMELFANK 714 S S + ++VG+L+ V DDM +E N+ Sbjct: 221 ERGGGYGSQRSGGGYGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGV-DDMALENLFNE 279 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTS 894 V A+VI D ++GRS+G+GFV + A+ +NG R IR+ A R Sbjct: 280 QGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 339 Query: 895 G 897 G Sbjct: 340 G 340 Score = 56.6 bits (135), Expect = 3e-07 Identities = 54/242 (22%), Positives = 92/242 (38%), Gaps = 64/242 (26%) Frame = +1 Query: 619 KRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 +R+ + D +FVG+L+ +V L +LF + +V+ +VI D TGRSRG+GFV Sbjct: 91 ERNSFSPDLKLFVGNLSFNVDSAQLAQLFESA-GNVEMVEVIYDKVTGRSRGFGFVTMST 149 Query: 799 DIDRTHAMTEMNGMYCSTRPIRI--GPATPRRT--------------------------- 891 + A + NG RP+R+ GP P+R Sbjct: 150 AAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPRSGGYGSERGGGYGSERGGG 209 Query: 892 -----------------------SGDSGTSPTTQSDG------DSTNRTVYVGGLDPNVS 984 G G+ ++ G + +YVG L V Sbjct: 210 YGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVD 269 Query: 985 EDELRKTFAKYGDVASVKIPV------GKQCGFVQFINRADAEEALQGLSGSTIGKQAVR 1146 + L F + G V ++ K GFV + + ++A+ L+G+ + + +R Sbjct: 270 DMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIR 329 Query: 1147 LS 1152 +S Sbjct: 330 VS 331
>Q6URK4:ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 - Rattus norvegicus (Rat)| Length = 379 Score = 58.5 bits (140), Expect = 8e-08 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 3/141 (2%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ + TDD L E F K+ ++ V+ D T RSRG+GFV + + E Sbjct: 37 LFIGGLSFETTDDSLREHF-EKWGTLTDCVVMRDPQTKRSRGFGFVTYS-------CVEE 88 Query: 829 MNGMYCSTRPIRIGPAT---PRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 ++ C+ RP ++ R S + P T + ++VGG+ + E LR Sbjct: 89 VDAAMCA-RPHKVDGRVVEPKRAVSREDSVKPGAHL----TVKKIFVGGIKEDTEEYNLR 143 Query: 1000 KTFAKYGDVASVKIPVGKQCG 1062 F KYG + ++++ +Q G Sbjct: 144 DYFEKYGKIETIEVMEDRQSG 164 Score = 43.9 bits (102), Expect = 0.002 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 4/152 (2%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 ++ R +++G L + ++ L F G + V+R+ + S G+GFV + + Sbjct: 32 EQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDA 91 Query: 535 AL----QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMEL 702 A+ G V+ RA S K + IFVG + D + L + Sbjct: 92 AMCARPHKVDGRVV-EPKRA-----VSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145 Query: 703 FANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 F KY ++ +V+ D +G+ RG+ FV F D Sbjct: 146 F-EKYGKIETIEVMEDRQSGKKRGFAFVTFDD 176
>Q8BG05:ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 - Mus musculus (Mouse)| Length = 379 Score = 58.5 bits (140), Expect = 8e-08 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 3/141 (2%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ + TDD L E F K+ ++ V+ D T RSRG+GFV + + E Sbjct: 37 LFIGGLSFETTDDSLREHF-EKWGTLTDCVVMRDPQTKRSRGFGFVTYS-------CVEE 88 Query: 829 MNGMYCSTRPIRIGPAT---PRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 ++ C+ RP ++ R S + P T + ++VGG+ + E LR Sbjct: 89 VDAAMCA-RPHKVDGRVVEPKRAVSREDSVKPGAHL----TVKKIFVGGIKEDTEEYNLR 143 Query: 1000 KTFAKYGDVASVKIPVGKQCG 1062 F KYG + ++++ +Q G Sbjct: 144 DYFEKYGKIETIEVMEDRQSG 164 Score = 43.9 bits (102), Expect = 0.002 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 4/152 (2%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 ++ R +++G L + ++ L F G + V+R+ + S G+GFV + + Sbjct: 32 EQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDA 91 Query: 535 AL----QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMEL 702 A+ G V+ RA S K + IFVG + D + L + Sbjct: 92 AMCARPHKVDGRVV-EPKRA-----VSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145 Query: 703 FANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 F KY ++ +V+ D +G+ RG+ FV F D Sbjct: 146 F-EKYGKIETIEVMEDRQSGKKRGFAFVTFDD 176
>P51991:ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 - Homo sapiens (Human)| Length = 378 Score = 58.5 bits (140), Expect = 8e-08 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 3/141 (2%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ + TDD L E F K+ ++ V+ D T RSRG+GFV + + E Sbjct: 37 LFIGGLSFETTDDSLREHF-EKWGTLTDCVVMRDPQTKRSRGFGFVTYS-------CVEE 88 Query: 829 MNGMYCSTRPIRIGPAT---PRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 ++ C+ RP ++ R S + P T + ++VGG+ + E LR Sbjct: 89 VDAAMCA-RPHKVDGRVVEPKRAVSREDSVKPGAHL----TVKKIFVGGIKEDTEEYNLR 143 Query: 1000 KTFAKYGDVASVKIPVGKQCG 1062 F KYG + ++++ +Q G Sbjct: 144 DYFEKYGKIETIEVMEDRQSG 164 Score = 43.9 bits (102), Expect = 0.002 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 4/152 (2%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 ++ R +++G L + ++ L F G + V+R+ + S G+GFV + + Sbjct: 32 EQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDA 91 Query: 535 AL----QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMEL 702 A+ G V+ RA S K + IFVG + D + L + Sbjct: 92 AMCARPHKVDGRVV-EPKRA-----VSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145 Query: 703 FANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 F KY ++ +V+ D +G+ RG+ FV F D Sbjct: 146 F-EKYGKIETIEVMEDRQSGKKRGFAFVTFDD 176
>Q9WX39:RBPF_ANASP Putative RNA-binding protein rbpF - Anabaena sp. (strain PCC 7120)| Length = 105 Score = 58.5 bits (140), Expect = 8e-08 Identities = 31/87 (35%), Positives = 49/87 (56%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 SI+VG+L+ +VT + + +FA +Y SVK + D TGR RG+ FV G D + T A+ Sbjct: 2 SIYVGNLSYEVTQEDISNVFA-EYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIE 60 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSG 906 ++G R +++ A P+ G G Sbjct: 61 GLDGAEWMGRDLKVNKAKPKEDRGSFG 87 Score = 42.4 bits (98), Expect = 0.006 Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 6/89 (6%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQG 1110 ++YVG L V+++++ FA+YG V V +P ++ G FV+ + A+ A++G Sbjct: 2 SIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEG 61 Query: 1111 LSGSTIGKQAVRLSWGRSPASKQSRGDSG 1197 L G+ + ++++ + K+ RG G Sbjct: 62 LDGAEWMGRDLKVNKAK---PKEDRGSFG 87
>Q57014:RBPA_SYNY3 Putative RNA-binding protein rbpA - Synechocystis sp. (strain PCC| 6803) Length = 101 Score = 58.5 bits (140), Expect = 8e-08 Identities = 32/88 (36%), Positives = 50/88 (56%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 SI+VG+L+ DV++ L +FA +Y SVK ++ D TGR RG+GFV D + T A+ Sbjct: 2 SIYVGNLSYDVSEADLTAVFA-EYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIE 60 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGT 909 ++G R +++ A PR G+ Sbjct: 61 ALDGAEWMGRDLKVNKAKPRENRSGGGS 88 Score = 43.1 bits (100), Expect = 0.003 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 8/94 (8%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEE--AL 1104 ++YVG L +VSE +L FA+YG V V++P ++ GFV+ ADAEE A+ Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVEL--EADAEETAAI 59 Query: 1105 QGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHRR 1206 + L G+ + ++++ + ++ G G R Sbjct: 60 EALDGAEWMGRDLKVNKAKPRENRSGGGSFGGGR 93 Score = 38.1 bits (87), Expect = 0.11 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +I+VG+L Y + E L + F G V +++ +R +G G+GFVE + A A++ Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEA 61 Query: 547 FAG 555 G Sbjct: 62 LDG 64
>Q9JJ54:HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 - Rattus norvegicus (Rat)| Length = 353 Score = 58.5 bits (140), Expect = 8e-08 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 4/137 (2%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF--GDDIDRTHAM 822 +F+G L+ D T L + F+ K+ V + +D TGRSRG+GFV F + +D+ Sbjct: 97 MFIGGLSWDTTKKDLKDYFS-KFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155 Query: 823 TE--MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 E +NG P+R P + ++VGGL P+ E+++ Sbjct: 156 KEHKLNGKVID----------PKRAKAMKTKEPV---------KKIFVGGLSPDTPEEKI 196 Query: 997 RKTFAKYGDVASVKIPV 1047 R+ F +G+V S+++P+ Sbjct: 197 REYFGGFGEVESIELPM 213 Score = 45.1 bits (105), Expect = 9e-04 Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 4/152 (2%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E +++G L + + L F G+VV + + +G S G+GFV F S +K Sbjct: 93 EEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 152 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASD----HSIFVGDLAVDVTDDMLMELF 705 + + KLN + KR++ IFVG L+ D ++ + E F Sbjct: 153 MD----------QKEHKLN--GKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYF 200 Query: 706 ANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 801 + V+ ++ +D T + RG+ F+ F ++ Sbjct: 201 GG-FGEVESIELPMDNKTNKRRGFCFITFKEE 231
>Q60668:HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 - Mus musculus (Mouse)| Length = 355 Score = 58.5 bits (140), Expect = 8e-08 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 4/137 (2%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF--GDDIDRTHAM 822 +F+G L+ D T L + F+ K+ V + +D TGRSRG+GFV F + +D+ Sbjct: 99 MFIGGLSWDTTKKDLKDYFS-KFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 823 TE--MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 E +NG P+R P + ++VGGL P+ E+++ Sbjct: 158 KEHKLNGKVID----------PKRAKAMKTKEPV---------KKIFVGGLSPDTPEEKI 198 Query: 997 RKTFAKYGDVASVKIPV 1047 R+ F +G+V S+++P+ Sbjct: 199 REYFGGFGEVESIELPM 215 Score = 46.2 bits (108), Expect = 4e-04 Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E +++G L + + L F GEVV + + +G S G+GFV F S +K Sbjct: 95 EEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASD----HSIFVGDLAVDVTDDMLMELF 705 + + KLN + KR++ IFVG L+ D ++ + E F Sbjct: 155 MD----------QKEHKLN--GKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYF 202 Query: 706 ANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 801 + V+ ++ +D T + RG+ F+ F ++ Sbjct: 203 GG-FGEVESIELPMDNKTNKRRGFCFITFKEE 233
>Q14103:HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 - Homo sapiens (Human)| Length = 355 Score = 58.5 bits (140), Expect = 8e-08 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 4/137 (2%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF--GDDIDRTHAM 822 +F+G L+ D T L + F+ K+ V + +D TGRSRG+GFV F + +D+ Sbjct: 99 MFIGGLSWDTTKKDLKDYFS-KFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 823 TE--MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 E +NG P+R P + ++VGGL P+ E+++ Sbjct: 158 KEHKLNGKVID----------PKRAKAMKTKEPV---------KKIFVGGLSPDTPEEKI 198 Query: 997 RKTFAKYGDVASVKIPV 1047 R+ F +G+V S+++P+ Sbjct: 199 REYFGGFGEVESIELPM 215 Score = 46.2 bits (108), Expect = 4e-04 Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 E +++G L + + L F GEVV + + +G S G+GFV F S +K Sbjct: 95 EEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154 Query: 538 LQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASD----HSIFVGDLAVDVTDDMLMELF 705 + + KLN + KR++ IFVG L+ D ++ + E F Sbjct: 155 MD----------QKEHKLN--GKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYF 202 Query: 706 ANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 801 + V+ ++ +D T + RG+ F+ F ++ Sbjct: 203 GG-FGEVESIELPMDNKTNKRRGFCFITFKEE 233
>O43347:MSI1H_HUMAN RNA-binding protein Musashi homolog 1 - Homo sapiens (Human)| Length = 362 Score = 58.2 bits (139), Expect = 1e-07 Identities = 45/181 (24%), Positives = 84/181 (46%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L + + L FG GEV V+R+ + S G+GFV F A +K L Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ- 80 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 + H + + K+ ++ + + IFVG L+V+ T + + + F ++ V Sbjct: 81 SRHELDSKTIDPKV---AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYF-EQFGKVD 136 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 A ++ D T R RG+GFV F + D + E++ + + + A P+ +G+ Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESE-DIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGS 195 Query: 910 S 912 + Sbjct: 196 A 196
>Q7ZX83:HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A - Xenopus laevis| (African clawed frog) Length = 293 Score = 58.2 bits (139), Expect = 1e-07 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 11/194 (5%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ D + L E + +++ V + D TGRSRG+GFV F D + + E Sbjct: 28 MFIGGLSWDTSKKDLTE-YLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVS-VDKVLE 85 Query: 829 MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF 1008 N + I P+R G P + V+VGGL P +E+++++ F Sbjct: 86 TNEHKLDGKLI-----DPKRAKALKGKEPP---------KKVFVGGLSPETTEEQIKQYF 131 Query: 1009 AKYGDVASVKIPVGKQCG------FVQFINRADAEEALQGL-----SGSTIGKQAVRLSW 1155 +G++ ++++P+ + FV + ++ L+ +G K A Sbjct: 132 GGFGEIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKAAQPKEV 191 Query: 1156 GRSPASKQSRGDSG 1197 R KQ RG G Sbjct: 192 YRQQQQKQQRGGRG 205 Score = 41.2 bits (95), Expect = 0.013 Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 4/150 (2%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 DE + +++G L + + L GEV+ + + +G S G+GFV F S +K Sbjct: 24 DEGK-MFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDK 82 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS----DHSIFVGDLAVDVTDDMLMEL 702 L+ KL+ + KR++ +FVG L+ + T++ + + Sbjct: 83 VLET----------NEHKLD--GKLIDPKRAKALKGKEPPKKVFVGGLSPETTEEQIKQY 130 Query: 703 FANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 F + ++ ++ ID T RG+ FV + Sbjct: 131 FGG-FGEIENIELPIDTKTNERRGFCFVTY 159
>Q8CGC6:RBM28_MOUSE RNA-binding protein 28 - Mus musculus (Mouse)| Length = 750 Score = 57.8 bits (138), Expect = 1e-07 Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 16/201 (7%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++FVG L D L ELF+ + VK V+ + + RG+G+V F D A+ Sbjct: 5 TLFVGRLPPSARSDQLEELFS-QVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSD-----------GDSTNRTVYVGGLD 972 E+ + + R S ++ + +S D R + + L Sbjct: 64 EITTFEGCKIDVTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLI-IRNLS 122 Query: 973 PNVSEDELRKTFAKYGDVASVKIPV---GKQCG--FVQFINRADAEEALQGLSGSTIGKQ 1137 SED+L+ F YG V V IP GK G FVQF N +A +AL+G + I + Sbjct: 123 FKCSEDDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGR 182 Query: 1138 AVRLSWGRSPASKQSRGDSGH 1200 V + W +K D+ H Sbjct: 183 TVAVDWA---VAKDKYKDAQH 200
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 176 Score = 57.8 bits (138), Expect = 1e-07 Identities = 35/89 (39%), Positives = 46/89 (51%) Frame = +1 Query: 640 DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHA 819 ++ FVG LA TDD +E +Y V +K+I D TGRSRG+GFV F D+ A Sbjct: 7 EYRCFVGGLAW-ATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDA 65 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 + MNG R I + A R + G G Sbjct: 66 IEGMNGQDLDGRSITVNEAQSRGSGGGGG 94 Score = 43.9 bits (102), Expect = 0.002 Identities = 20/61 (32%), Positives = 34/61 (55%) Frame = +1 Query: 373 WVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFA 552 +VG L + D+ L + F G+V+ K+I +R +G S G+GFV F + + A++ Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70 Query: 553 G 555 G Sbjct: 71 G 71 Score = 41.2 bits (95), Expect = 0.013 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%) Frame = +1 Query: 955 YVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLS 1116 +VGGL + L FA+YGDV KI ++ GFV F + ++A++G++ Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70 Query: 1117 GSTIGKQAVRLSWGRSPASKQSRGDSGHR 1203 G + +++ ++ S+ S G GHR Sbjct: 71 GQDLDGRSITVN---EAQSRGSGGGGGHR 96
>Q8K3P4:MSI1H_RAT RNA-binding protein Musashi homolog 1 - Rattus norvegicus (Rat)| Length = 362 Score = 57.4 bits (137), Expect = 2e-07 Identities = 45/181 (24%), Positives = 83/181 (45%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L + + L FG GEV V+R+ + S G+GFV F A +K L Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ- 80 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 + H + + K+ ++ + + IFVG L+V+ T + + F ++ V Sbjct: 81 SRHELDSKTIDPKV---AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYF-EQFGKVD 136 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 A ++ D T R RG+GFV F + D + E++ + + + A P+ +G+ Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESE-DIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGS 195 Query: 910 S 912 + Sbjct: 196 A 196
>Q61474:MSI1H_MOUSE RNA-binding protein Musashi homolog 1 - Mus musculus (Mouse)| Length = 362 Score = 57.4 bits (137), Expect = 2e-07 Identities = 45/181 (24%), Positives = 83/181 (45%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L + + L FG GEV V+R+ + S G+GFV F A +K L Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ- 80 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 + H + + K+ ++ + + IFVG L+V+ T + + F ++ V Sbjct: 81 SRHELDSKTIDPKV---AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYF-EQFGKVD 136 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 A ++ D T R RG+GFV F + D + E++ + + + A P+ +G+ Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESE-DIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGS 195 Query: 910 S 912 + Sbjct: 196 A 196
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 57.4 bits (137), Expect = 2e-07 Identities = 32/89 (35%), Positives = 47/89 (52%) Frame = +1 Query: 640 DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHA 819 ++ FVG LA D+ L + F+ ++ + +K+I D TGRSRG+GFV F D+ A Sbjct: 5 EYRCFVGGLAWATNDESLEQAFS-QFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDA 63 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 + MNG R I + A R + G G Sbjct: 64 IEGMNGQELDGRNITVNEAQSRGSGGGGG 92 Score = 40.8 bits (94), Expect = 0.016 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = +1 Query: 373 WVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFA 552 +VG L + ++ L F G++ K+I +R +G S G+GFV F S A++ Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMN 68 Query: 553 G 555 G Sbjct: 69 G 69 Score = 38.5 bits (88), Expect = 0.082 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Frame = +1 Query: 955 YVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLS 1116 +VGGL +++ L + F+++GD+ KI ++ GFV F + +A++G++ Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMN 68 Query: 1117 GSTIGKQAVRLSWGRSPASKQSRGDSG 1197 G + + + ++ QSRG G Sbjct: 69 GQELDGRNITVN------EAQSRGSGG 89
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus laevis| (African clawed frog) Length = 365 Score = 57.0 bits (136), Expect = 2e-07 Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 6/145 (4%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ + TD+ L E F ++ ++ V+ D N+ RSRG+GFV + + AMT Sbjct: 16 LFIGGLSFETTDESLREHF-EQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMT- 73 Query: 829 MNGMYCSTRPIRIGPAT--PRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRK 1002 RP ++ P+R +S + T + ++VGG+ + ED LR+ Sbjct: 74 -------ARPHKVDGRVVEPKRAVSREDSS---RPGAHLTVKKIFVGGIKEDTEEDHLRE 123 Query: 1003 TFAKYGDVASVKIPV----GKQCGF 1065 F +YG + ++I GK+ GF Sbjct: 124 YFEQYGKIEVIEIMTDRGSGKKRGF 148
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 57.0 bits (136), Expect = 2e-07 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 16/186 (8%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++FVG L + L ELF+ + VK V+ + + RG+G+V F D A+ Sbjct: 5 TLFVGRLPPSARSEQLEELFS-QVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSD-----------GDSTNRTVYVGGLD 972 E+ + + R + + G + ++ D R + + L Sbjct: 64 EITTFEGCKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAKVADKKARLI-IRNLS 122 Query: 973 PNVSEDELRKTFAKYGDVASVKIPV---GKQ--CGFVQFINRADAEEALQGLSGSTIGKQ 1137 SED+L+ FA++G V V IP GK GFVQF N +A +AL+G++ I + Sbjct: 123 FKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGR 182 Query: 1138 AVRLSW 1155 V + W Sbjct: 183 TVAVDW 188 Score = 32.3 bits (72), Expect = 5.9 Identities = 21/82 (25%), Positives = 40/82 (48%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D+ + + +L + E+ L + F G V+ + + R + G G+GFV+F + A K Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGK 169 Query: 535 ALQNFAGHVMPNTDRAFKLNWA 600 AL+ ++ R ++WA Sbjct: 170 ALKGM--NMKEIKGRTVAVDWA 189
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 57.0 bits (136), Expect = 2e-07 Identities = 34/89 (38%), Positives = 45/89 (50%) Frame = +1 Query: 640 DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHA 819 ++ FVG LA ++ L + FAN + V +KVI D TGRSRG+GFV F + A Sbjct: 7 EYRCFVGGLAWATNNETLEQAFAN-FGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDA 65 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 + MNG R I + A R G G Sbjct: 66 IENMNGKELDGRNITVNQAQSRGGGGGGG 94 Score = 43.9 bits (102), Expect = 0.002 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = +1 Query: 373 WVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFA 552 +VG L + + L F G+V+ KVI +R +G S G+GFV F S S A++N Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70 Query: 553 G 555 G Sbjct: 71 G 71
>Q10355:YDB2_SCHPO Uncharacterized RNA-binding protein C22E12.02 - Schizosaccharomyces| pombe (Fission yeast) Length = 219 Score = 56.6 bits (135), Expect = 3e-07 Identities = 31/77 (40%), Positives = 46/77 (59%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +FVG+L DV D+ L + F+ +Y S+ KV+ D G++RG+GFV F D A E Sbjct: 32 LFVGNLGNDVNDESLYQAFS-EYPSLVKTKVVRDRE-GKTRGFGFVSFKDSDQFLKAWRE 89 Query: 829 MNGMYCSTRPIRIGPAT 879 NG Y +RP+++ AT Sbjct: 90 KNGKYIGSRPVKLSRAT 106
>Q13148:TADBP_HUMAN TAR DNA-binding protein 43 - Homo sapiens (Human)| Length = 414 Score = 56.6 bits (135), Expect = 3e-07 Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 5/182 (2%) Frame = +1 Query: 598 ASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGY 777 AS +V KR+ + I +G L T+ L E F+ + V +V D TG S+G+ Sbjct: 90 ASSAVKVKRAVQKTSDLIVLG-LPWKTTEQDLKEYFST-FGEVLMVQVKKDLKTGHSKGF 147 Query: 778 GFVRFGDDIDRTHAMTE---MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDST-- 942 GFVRF + + M++ ++G +C + P ++ D Sbjct: 148 GFVRFTEYETQVKVMSQRHMIDGRWCDCK------------------LPNSKQSQDEPLR 189 Query: 943 NRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGS 1122 +R V+VG +++EDELR+ F++YGDV V IP K F+ AD ++ Q L G Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIP--KPFRAFAFVTFAD-DQIAQSLCGE 246 Query: 1123 TI 1128 + Sbjct: 247 DL 248 Score = 43.1 bits (100), Expect = 0.003 Identities = 37/133 (27%), Positives = 59/133 (44%) Frame = +1 Query: 403 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRA 582 E L F GEV+ ++V ++ +G S+G+GFV F + + K + H++ Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCD 174 Query: 583 FKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTG 762 KL + S + E +FVG D+T+D L E F ++Y V + Sbjct: 175 CKLPNSKQS----QDEPLRSRKVFVGRCTEDMTEDELREFF-SQYGDVMDVFI-----PK 224 Query: 763 RSRGYGFVRFGDD 801 R + FV F DD Sbjct: 225 PFRAFAFVTFADD 237
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 56.6 bits (135), Expect = 3e-07 Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 7/137 (5%) Frame = +1 Query: 631 LASDHS-IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID 807 +ASD +FVG L+ D + L ++F+ KY + V+ D T RSRG+GFV F + D Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFS-KYGQISEVVVVKDRETQRSRGFGFVTFENIDD 59 Query: 808 RTHAMTEMNGMYCSTRPIRI---GPATPRRTSGDSGTSPTTQS---DGDSTNRTVYVGGL 969 AM MNG R IR+ G ++ R+ G G S + G S R GG Sbjct: 60 AKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGG 119 Query: 970 DPNVSEDELRKTFAKYG 1020 D YG Sbjct: 120 DRGYGGGRFESRSGGYG 136 Score = 49.7 bits (117), Expect = 4e-05 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 6/88 (6%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGL 1113 ++VGGL + +E L + F+KYG ++ V + ++ GFV F N DA++A+ + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1114 SGSTIGKQAVRLSWGRSPASKQSRGDSG 1197 +G ++ + +R+ + +SRG G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 56.6 bits (135), Expect = 3e-07 Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 7/137 (5%) Frame = +1 Query: 631 LASDHS-IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID 807 +ASD +FVG L+ D + L ++F+ KY + V+ D T RSRG+GFV F + D Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFS-KYGQISEVVVVKDRETQRSRGFGFVTFENIDD 59 Query: 808 RTHAMTEMNGMYCSTRPIRI---GPATPRRTSGDSGTSPTTQS---DGDSTNRTVYVGGL 969 AM MNG R IR+ G ++ R+ G G S + G S R GG Sbjct: 60 AKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGG 119 Query: 970 DPNVSEDELRKTFAKYG 1020 D YG Sbjct: 120 DRGYGGGRFESRSGGYG 136 Score = 49.7 bits (117), Expect = 4e-05 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 6/88 (6%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGL 1113 ++VGGL + +E L + F+KYG ++ V + ++ GFV F N DA++A+ + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1114 SGSTIGKQAVRLSWGRSPASKQSRGDSG 1197 +G ++ + +R+ + +SRG G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 56.6 bits (135), Expect = 3e-07 Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 7/137 (5%) Frame = +1 Query: 631 LASDHS-IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID 807 +ASD +FVG L+ D + L ++F+ KY + V+ D T RSRG+GFV F + D Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFS-KYGQISEVVVVKDRETQRSRGFGFVTFENIDD 59 Query: 808 RTHAMTEMNGMYCSTRPIRI---GPATPRRTSGDSGTSPTTQS---DGDSTNRTVYVGGL 969 AM MNG R IR+ G ++ R+ G G S + G S R GG Sbjct: 60 AKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGG 119 Query: 970 DPNVSEDELRKTFAKYG 1020 D YG Sbjct: 120 DRGYGGGRFESRSGGYG 136 Score = 49.7 bits (117), Expect = 4e-05 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 6/88 (6%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGL 1113 ++VGGL + +E L + F+KYG ++ V + ++ GFV F N DA++A+ + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1114 SGSTIGKQAVRLSWGRSPASKQSRGDSG 1197 +G ++ + +R+ + +SRG G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>Q8SX83:SPEN_DROME Protein split ends - Drosophila melanogaster (Fruit fly)| Length = 5560 Score = 56.2 bits (134), Expect = 4e-07 Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 9/249 (3%) Frame = +1 Query: 436 GEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ-----NFAG---HVMPNTDRAFKL 591 G+V +KV+ SE Y V F EKAL+ +F G V P + Sbjct: 582 GKVTWVKVVGQN----SERYALVCFKKPDDVEKALEVSHDKHFFGCKIEVEPYQGYDVED 637 Query: 592 N-WASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRS 768 N + Y S ++F+G+L D+T L F G + ID Sbjct: 638 NEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSHF-----EAFGEIIEIDIKKQGL 692 Query: 769 RGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNR 948 Y F ++ D + AM +M+G + + I++G G S T Sbjct: 693 NAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLG----------FGKSMPTNC------- 735 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTI 1128 V++ G+D VSE L+ F ++G V V I +Q V + +A+ A++ + G+ + Sbjct: 736 -VWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTIL 794 Query: 1129 GKQAVRLSW 1155 ++ +++ + Sbjct: 795 RRKKLQVDF 803 Score = 32.7 bits (73), Expect = 4.5 Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 2/170 (1%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+++G+L+ + L S F GE++ I + + G++ Y F ++ S KA++ Sbjct: 656 RTLFIGNLEKDITAGELRSHFEAFGEIIEIDI---KKQGLN-AYAFCQYSDIVSVVKAMR 711 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 G +G R +L S+ + +D D+ + E F + Sbjct: 712 KMDGE----------------HLGSNRIKLGFGKSMPTNCVWIDGVDEKVSESFLQSQFT 755 Query: 724 VKGA--KVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRI 867 GA KV ID R+R V + + A+ +M G + +++ Sbjct: 756 RFGAVTKVSID----RNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQV 801
>P21522:ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog -| Schistocerca americana (American grasshopper) Length = 342 Score = 56.2 bits (134), Expect = 4e-07 Identities = 39/145 (26%), Positives = 69/145 (47%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 R +++G L Y + L F GE+V + V+++ + S G+GF+ YS A Q Sbjct: 17 RKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFIT-YSRAHMVDDAQ 75 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 N H + K +G + A+ +FVG + ++ ++ L + F +Y + Sbjct: 76 NARPHKVDGRVVEPKRAVPRTEIGRPEAG-ATVKKLFVGGIKEEMEENDLRDYF-KQYGT 133 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGD 798 V A +++D T + RG+ FV F D Sbjct: 134 VVSAAIVVDKETRKKRGFAFVEFDD 158 Score = 52.8 bits (125), Expect = 4e-06 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 3/139 (2%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L TD+ L + F ++ + V+ D T RSRG+GF+ + R H + + Sbjct: 19 LFIGGLDYRTTDESLKQHF-EQWGEIVDVVVMKDPKTKRSRGFGFITYS----RAHMVDD 73 Query: 829 MNGMY---CSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 R + A PR G + + +T + ++VGG+ + E++LR Sbjct: 74 AQNARPHKVDGRVVEPKRAVPRTEIG--------RPEAGATVKKLFVGGIKEEMEENDLR 125 Query: 1000 KTFAKYGDVASVKIPVGKQ 1056 F +YG V S I V K+ Sbjct: 126 DYFKQYGTVVSAAIVVDKE 144 Score = 34.3 bits (77), Expect = 1.5 Identities = 16/57 (28%), Positives = 31/57 (54%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 + ++VG ++ M+EN L F G VV+ ++ ++ + G+ FVEF + +K Sbjct: 108 KKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDK 164
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila melanogaster| (Fruit fly) Length = 385 Score = 56.2 bits (134), Expect = 4e-07 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 3/157 (1%) Frame = +1 Query: 601 SYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYG 780 +Y GE+ +E +F+G L TDD L F K+ ++ V+ D T RSRG+G Sbjct: 10 NYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHF-EKWGNIVDVVVMKDPKTKRSRGFG 68 Query: 781 FVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTV-- 954 F+ T++ + M + RP +I RT P + D + TV Sbjct: 69 FI--------TYSQSYMIDNAQNARPHKI----DGRTVEPKRAVPRQEIDSPNAGATVKK 116 Query: 955 -YVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG 1062 +VGGL + E+ LR+ F +G + SV I K G Sbjct: 117 LFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTG 153 Score = 51.6 bits (122), Expect = 9e-06 Identities = 35/148 (23%), Positives = 69/148 (46%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 ++ R +++G L Y ++ L + F G +V + V+++ + S G+GF+ + + Sbjct: 21 EQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDN 80 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANK 714 A QN H + K + + A+ +FVG L D ++ L E F + Sbjct: 81 A-QNARPHKIDGRTVEPKRAVPRQEIDSPNAG-ATVKKLFVGGLRDDHDEECLREYFKD- 137 Query: 715 YRSVKGAKVIIDANTGRSRGYGFVRFGD 798 + + ++ D +TG+ RG+ F+ F D Sbjct: 138 FGQIVSVNIVSDKDTGKKRGFAFIEFDD 165
>Q6NU14:HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B - Xenopus laevis| (African clawed frog) Length = 291 Score = 56.2 bits (134), Expect = 4e-07 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 17/203 (8%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD--DIDRTHAM 822 +F+G L+ D + L E + +++ V + D TGRSRG+GFV F D +D+ Sbjct: 36 MFIGGLSWDTSKKDLTE-YLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 94 Query: 823 TE--MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 E ++G P+R G P + V+VGGL P +E+++ Sbjct: 95 KEHKLDGKLID----------PKRAKALQGKEPP---------KKVFVGGLSPETTEEQI 135 Query: 997 RKTFAKYGDVASVKIPV----GKQCGFVQFINRADAEEALQGLSGSTI-----GKQAVRL 1149 ++ F +G++ ++++P+ ++ GF F+ D EE +Q L S GK ++ Sbjct: 136 KQYFGGFGEIENIELPMDTKTNERRGFC-FVTYTD-EEPVQKLLESRFHQIGTGKCEIKA 193 Query: 1150 SWG----RSPASKQSRGDSGHRR 1206 + R KQ +G G R Sbjct: 194 AQPKEVYRQQQQKQQKGGRGGTR 216 Score = 42.7 bits (99), Expect = 0.004 Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 4/148 (2%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L + + L GEV+ + + +G S G+GFV F S +K L+ Sbjct: 36 MFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET- 94 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELAS----DHSIFVGDLAVDVTDDMLMELFANKY 717 + KL+ + KR++ +FVG L+ + T++ + + F + Sbjct: 95 ---------KEHKLD--GKLIDPKRAKALQGKEPPKKVFVGGLSPETTEEQIKQYFGG-F 142 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDD 801 ++ ++ +D T RG+ FV + D+ Sbjct: 143 GEIENIELPMDTKTNERRGFCFVTYTDE 170
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea| mays (Maize) Length = 157 Score = 56.2 bits (134), Expect = 4e-07 Identities = 33/89 (37%), Positives = 45/89 (50%) Frame = +1 Query: 640 DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHA 819 ++ FVG LA +++ L FA+ Y + +KVI D TGRSRG+GFV F + A Sbjct: 7 EYRCFVGGLAWATSNESLENAFAS-YGEILDSKVITDRETGRSRGFGFVTFSSENSMLDA 65 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 + MNG R I + A R G G Sbjct: 66 IENMNGKELDGRNITVNQAQSRGGGGGGG 94 Score = 43.9 bits (102), Expect = 0.002 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = +1 Query: 373 WVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFA 552 +VG L + L + F GE++ KVI +R +G S G+GFV F S S A++N Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70 Query: 553 G 555 G Sbjct: 71 G 71 Score = 35.8 bits (81), Expect = 0.53 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%) Frame = +1 Query: 955 YVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLS 1116 +VGGL S + L FA YG++ K+ ++ GFV F + +A++ ++ Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70 Query: 1117 GSTIGKQAVRLSWGRSPASKQSRGDSG 1197 G + + + ++ QSRG G Sbjct: 71 GKELDGRNITVN------QAQSRGGGG 91
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 169 Score = 56.2 bits (134), Expect = 4e-07 Identities = 33/89 (37%), Positives = 47/89 (52%) Frame = +1 Query: 640 DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHA 819 ++ FVG LA D+ L F+ ++ V +K+I D +GRSRG+GFV F D+ A Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFS-QFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDA 63 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 + EMNG R I + A R + G G Sbjct: 64 IEEMNGKELDGRVITVNEAQSRGSGGGGG 92 Score = 41.2 bits (95), Expect = 0.013 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = +1 Query: 373 WVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFA 552 +VG L + ++ L F G+V+ K+I +R SG S G+GFV F + A++ Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68 Query: 553 G 555 G Sbjct: 69 G 69 Score = 38.9 bits (89), Expect = 0.063 Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 6/87 (6%) Frame = +1 Query: 955 YVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLS 1116 +VGGL ++++L++TF+++GDV KI ++ GFV F + +A++ ++ Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68 Query: 1117 GSTIGKQAVRLSWGRSPASKQSRGDSG 1197 G + + + ++ QSRG G Sbjct: 69 GKELDGRVITVN------EAQSRGSGG 89
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 56.2 bits (134), Expect = 4e-07 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 4/98 (4%) Frame = +1 Query: 631 LASDHS-IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID 807 +ASD +FVG L+ D + L ++F+ KY + V+ D T RSRG+GFV F + D Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFS-KYGQISEVVVVKDRETQRSRGFGFVTFENIDD 59 Query: 808 RTHAMTEMNGMYCSTRPIRI---GPATPRRTSGDSGTS 912 AM MNG R IR+ G ++ R+ G G S Sbjct: 60 AKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGS 97 Score = 50.1 bits (118), Expect = 3e-05 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 6/88 (6%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGL 1113 ++VGGL + +E L + F+KYG ++ V + ++ GFV F N DA++A+ + Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1114 SGSTIGKQAVRLSWGRSPASKQSRGDSG 1197 +G ++ + +R+ + +SRG G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 56.2 bits (134), Expect = 4e-07 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 4/98 (4%) Frame = +1 Query: 631 LASDHS-IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID 807 +ASD +FVG L+ D + L ++F+ KY + V+ D T RSRG+GFV F + D Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFS-KYGQISEVVVVKDRETQRSRGFGFVTFENIDD 59 Query: 808 RTHAMTEMNGMYCSTRPIRI---GPATPRRTSGDSGTS 912 AM MNG R IR+ G ++ R+ G G S Sbjct: 60 AKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGS 97 Score = 50.1 bits (118), Expect = 3e-05 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 6/88 (6%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGL 1113 ++VGGL + +E L + F+KYG ++ V + ++ GFV F N DA++A+ + Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1114 SGSTIGKQAVRLSWGRSPASKQSRGDSG 1197 +G ++ + +R+ + +SRG G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 486 Score = 56.2 bits (134), Expect = 4e-07 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 8/166 (4%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF---GDDIDRTHA 819 +FVG + ++ + L LF ++ + V+ D TG +G F+ + I A Sbjct: 49 LFVGQIPRNLEEKDLKPLF-EQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTA 107 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 + E + RPI++ PA GD R ++VG L SE+E+ Sbjct: 108 LHEQKTLPGMARPIQVKPADSESRGGD---------------RKLFVGMLSKQQSEEEVT 152 Query: 1000 KTFAKYGDVASVKIPVG-----KQCGFVQFINRADAEEALQGLSGS 1122 F +G + + G K C FV+F + A+A+ A+Q L GS Sbjct: 153 SMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGS 198 Score = 37.0 bits (84), Expect = 0.24 Identities = 20/83 (24%), Positives = 43/83 (51%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++F+ L + D+ L ++F + ++ +KV +D T +S+ +GFV F + A+ Sbjct: 402 NLFIYHLPQEFGDNELTQMFL-PFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQ 460 Query: 826 EMNGMYCSTRPIRIGPATPRRTS 894 MNG + +++ P+ T+ Sbjct: 461 AMNGFQIGMKRLKVQLKRPKDTT 483
>Q24562:U2AF2_DROME Splicing factor U2AF 50 kDa subunit - Drosophila melanogaster (Fruit| fly) Length = 416 Score = 55.8 bits (133), Expect = 5e-07 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 30/203 (14%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S H IF+G L + DD + EL + + ++ ++ DA TG S+GY F + D Sbjct: 205 SPHKIFIGGLPNYLNDDQVKELLLS-FGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQ 263 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQS-------------DGDSTNRTVY 957 ++ +NGM + + + A+ + + + TTQS G T Sbjct: 264 SIAGLNGMQLGDKKLIVQRASVGAKNAQNAAN-TTQSVMLQVPGLSNVVTSGPPTEVLCL 322 Query: 958 VGGLDPNVSEDE---------LRKTFAKYGDVASVKIPVGKQ------CG--FVQFINRA 1086 + + P+ DE +++ KYG V SV+IP + CG FV+F + Sbjct: 323 LNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCGKVFVEFNSVL 382 Query: 1087 DAEEALQGLSGSTIGKQAVRLSW 1155 D ++A Q L+G + V S+ Sbjct: 383 DCQKAQQALTGRKFSDRVVVTSY 405 Score = 40.4 bits (93), Expect = 0.021 Identities = 35/182 (19%), Positives = 84/182 (46%), Gaps = 21/182 (11%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKV----IIDANTGRSRGYGFVRFGDDIDRTH 816 ++VG++ VT++ +ME F + V A+ ++ + + F+ F ID T Sbjct: 95 LYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDKNFAFLEF-RSIDETT 153 Query: 817 AMTEMNGMYCSTRPIRI-GPATPRRTSGDSGT---SPTTQSDG-------DSTNRTVYVG 963 +G+ + ++I P + G + T P S G DS ++ +++G Sbjct: 154 QAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSSGVISTVVPDSPHK-IFIG 212 Query: 964 GLDPNVSEDELRKTFAKYGDVASVKI------PVGKQCGFVQFINRADAEEALQGLSGST 1125 GL +++D++++ +G + + + + K F ++++ + ++++ GL+G Sbjct: 213 GLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQSIAGLNGMQ 272 Query: 1126 IG 1131 +G Sbjct: 273 LG 274
>Q5RBD3:RBMS3_PONPY RNA-binding motif, single-stranded-interacting protein 3 - Pongo| pygmaeus (Orangutan) Length = 436 Score = 55.8 bits (133), Expect = 5e-07 Identities = 41/161 (25%), Positives = 77/161 (47%) Frame = +1 Query: 400 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDR 579 D++ + C P G++V+ K I ++++ +GYGFV+F S A+A+KA+ Sbjct: 73 DQDLIKLC-QPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAV------------A 119 Query: 580 AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 + K N + +++ + ++++ +L + + D+ +E + V +++ DAN Sbjct: 120 SLKANGVQAQMAKQQEQ--DPTNLYISNLPISM-DEQELENMLKPFGHVISTRILRDAN- 175 Query: 760 GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATP 882 G SRG GF R + NG Y T P P+ P Sbjct: 176 GVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEP 216 Score = 46.2 bits (108), Expect = 4e-04 Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 7/178 (3%) Frame = +1 Query: 607 SVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFV 786 S E S ++++ L TD L++L Y + K I+D NT + +GYGFV Sbjct: 48 SSNNSSGEQLSKTNLYIRGLPPGTTDQDLIKL-CQPYGKIVSTKAILDKNTNQCKGYGFV 106 Query: 787 RFGDDIDRTHAMTEM--NGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYV 960 F A+ + NG+ Q + D TN +Y+ Sbjct: 107 DFDSPAAAQKAVASLKANGVQAQM---------------------AKQQEQDPTN--LYI 143 Query: 961 GGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQFINRADAEEALQGLSG 1119 L ++ E EL +G V S +I V + GF + + E +Q +G Sbjct: 144 SNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNG 201
>Q8BWL5:RBMS3_MOUSE RNA-binding motif, single-stranded-interacting protein 3 - Mus| musculus (Mouse) Length = 431 Score = 55.8 bits (133), Expect = 5e-07 Identities = 41/161 (25%), Positives = 77/161 (47%) Frame = +1 Query: 400 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDR 579 D++ + C P G++V+ K I ++++ +GYGFV+F S A+A+KA+ Sbjct: 69 DQDLIKLC-QPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAV------------A 115 Query: 580 AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 + K N + +++ + ++++ +L + + D+ +E + V +++ DAN Sbjct: 116 SLKANGVQAQMAKQQEQ--DPTNLYISNLPISM-DEQELENMLKPFGHVISTRILRDAN- 171 Query: 760 GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATP 882 G SRG GF R + NG Y T P P+ P Sbjct: 172 GVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEP 212 Score = 48.5 bits (114), Expect = 8e-05 Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 7/200 (3%) Frame = +1 Query: 541 QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYR 720 Q++A P + N +S S GE+ S+ ++++ L TD L++L Y Sbjct: 26 QSYAPAPHPMAPPSPSTNSSSNSSGEQLSKT----NLYIRGLPPGTTDQDLIKL-CQPYG 80 Query: 721 SVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEM--NGMYCSTRPIRIGPATPRRTS 894 + K I+D NT + +GYGFV F A+ + NG+ Sbjct: 81 KIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVASLKANGVQAQM-------------- 126 Query: 895 GDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQC 1059 Q + D TN +Y+ L ++ E EL +G V S +I V + Sbjct: 127 -------AKQQEQDPTN--LYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGV 177 Query: 1060 GFVQFINRADAEEALQGLSG 1119 GF + + E +Q +G Sbjct: 178 GFARMESTEKCEVVIQHFNG 197
>Q6XE24:RBMS3_HUMAN RNA-binding motif, single-stranded-interacting protein 3 - Homo| sapiens (Human) Length = 437 Score = 55.8 bits (133), Expect = 5e-07 Identities = 41/161 (25%), Positives = 77/161 (47%) Frame = +1 Query: 400 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDR 579 D++ + C P G++V+ K I ++++ +GYGFV+F S A+A+KA+ Sbjct: 74 DQDLIKLC-QPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAV------------A 120 Query: 580 AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 + K N + +++ + ++++ +L + + D+ +E + V +++ DAN Sbjct: 121 SLKANGVQAQMAKQQEQ--DPTNLYISNLPISM-DEQELENMLKPFGHVISTRILRDAN- 176 Query: 760 GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATP 882 G SRG GF R + NG Y T P P+ P Sbjct: 177 GVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEP 217 Score = 48.1 bits (113), Expect = 1e-04 Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 11/218 (5%) Frame = +1 Query: 499 FVEFYSHASAEKALQNFAGHVM----PNTDRAFKLNWASYSVGEKRSELASDHSIFVGDL 666 + +Y H K A H M P+T+ + N ++ S GE+ S+ ++++ L Sbjct: 14 YTYYYPHYLQTKQSYAPAPHPMAPPSPSTNSSSN-NSSNNSSGEQLSKT----NLYIRGL 68 Query: 667 AVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEM--NGM 840 TD L++L Y + K I+D NT + +GYGFV F A+ + NG+ Sbjct: 69 PPGTTDQDLIKL-CQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVASLKANGV 127 Query: 841 YCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYG 1020 Q + D TN +Y+ L ++ E EL +G Sbjct: 128 QAQM---------------------AKQQEQDPTN--LYISNLPISMDEQELENMLKPFG 164 Query: 1021 DVASVKI-----PVGKQCGFVQFINRADAEEALQGLSG 1119 V S +I V + GF + + E +Q +G Sbjct: 165 HVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNG 202
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 55.8 bits (133), Expect = 5e-07 Identities = 34/89 (38%), Positives = 46/89 (51%) Frame = +1 Query: 640 DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHA 819 ++ FVG LA T D +E +++ V +K+I D TGRSRG+GFV F D+ A Sbjct: 5 EYRCFVGGLAW-ATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDA 63 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 + EMNG R I + A R G G Sbjct: 64 IDEMNGKELDGRTITVNEAQSRGGGGGGG 92 Score = 40.8 bits (94), Expect = 0.016 Identities = 21/61 (34%), Positives = 31/61 (50%) Frame = +1 Query: 373 WVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFA 552 +VG L + + L F GEV+ K+I +R +G S G+GFV F S + A+ Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68 Query: 553 G 555 G Sbjct: 69 G 69 Score = 36.2 bits (82), Expect = 0.41 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Frame = +1 Query: 955 YVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLS 1116 +VGGL + EL +TF+++G+V KI ++ GFV F + ++A+ ++ Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68 Query: 1117 GSTIGKQAVRLSWGRSPASKQSRGDSG 1197 G + + + ++ QSRG G Sbjct: 69 GKELDGRTITVN------EAQSRGGGG 89
>Q02926:RB97D_DROME Ribonucleoprotein RB97D - Drosophila melanogaster (Fruit fly)| Length = 471 Score = 55.5 bits (132), Expect = 6e-07 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 9/168 (5%) Frame = +1 Query: 628 ELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID 807 EL +F+G LA T++ L +LF ++ V V+ DA T RSRG+GF+ Sbjct: 27 ELEHLRKLFIGGLAPYTTEENL-KLFYGQWGKVVDVVVMRDAATKRSRGFGFI------- 78 Query: 808 RTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTV---YVGGLDPN 978 T+ + M RP I T P + + TN +V +VGGL N Sbjct: 79 -TYTKSLMVDRAQENRPHIIDGKTVEAKRA----LPRPERESRETNISVKKLFVGGLKDN 133 Query: 979 VSEDELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEAL 1104 E+ LR+ F ++G+V SVK+ K G FV+F + ++A+ Sbjct: 134 HDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>Q9TTV2:ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 - Saguinus oedipus| (Cotton-top tamarin) Length = 341 Score = 55.1 bits (131), Expect = 8e-07 Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 8/156 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 ++ R +++G L + E L + + G++ V+R+ S S G+GFV F S A + Sbjct: 6 EQFRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 65 Query: 535 AL----QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDM 690 A+ + G V+ +V + S H +FVG + D + Sbjct: 66 AMAARPHSIDGRVVE----------PKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHH 115 Query: 691 LMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 L + FA +Y + ++I D +G+ RG+GFV F D Sbjct: 116 LRDYFA-EYGKIDTIEIITDRQSGKKRGFGFVTFDD 150 Score = 51.6 bits (122), Expect = 9e-06 Identities = 37/138 (26%), Positives = 62/138 (44%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ T++ L + ++ + V+ D + RSRG+GFV F + AM Sbjct: 11 LFIGGLSFQTTEESLRNYY-EQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69 Query: 829 MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF 1008 R + A R SG G T + ++VGG+ + E LR F Sbjct: 70 RPHSI-DGRVVEPKRAVAREESGKPGAHVTVKK--------LFVGGIKEDTEEHHLRDYF 120 Query: 1009 AKYGDVASVKIPVGKQCG 1062 A+YG + +++I +Q G Sbjct: 121 AEYGKIDTIEIITDRQSG 138
>P07909:ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 - Drosophila| melanogaster (Fruit fly) Length = 365 Score = 55.1 bits (131), Expect = 8e-07 Identities = 42/181 (23%), Positives = 79/181 (43%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 R +++G L Y + L + F G +V + V+++ + S G+GF+ YSH+S Q Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT-YSHSSMIDEAQ 89 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 H + K + + A+ +FVG L D + + + F + + + Sbjct: 90 KSRPHKIDGRVVEPKRAVPRQDIDSPNAG-ATVKKLFVGALKDDHDEQSIRDYFQH-FGN 147 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDS 903 + ++ID TG+ RG+ FV F DD D + + + + + A P++ Sbjct: 148 IVDINIVIDKETGKKRGFAFVEF-DDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 206 Query: 904 G 906 G Sbjct: 207 G 207
>Q8VC70:RBMS2_MOUSE RNA-binding motif, single-stranded-interacting protein 2 - Mus| musculus (Mouse) Length = 383 Score = 55.1 bits (131), Expect = 8e-07 Identities = 44/178 (24%), Positives = 80/178 (44%) Frame = +1 Query: 400 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDR 579 D++ + C P G++V+ K I ++ + +GYGFV+F S +SA+KA+ Sbjct: 71 DQDLVKLC-QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAV------------T 117 Query: 580 AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 A K + + +++ + ++++ +L + + D+ +E + V +++ D + Sbjct: 118 ALKASGVQAQMAKQQEQ--DPTNLYISNLPLSM-DEQELEGMLKPFGQVISTRILRD-TS 173 Query: 760 GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDG 933 G SRG GF R +T NG Y T P P+ P G QS G Sbjct: 174 GASRGVGFARMESTEKCEAIITHFNGKYIKTPPGVAAPSDPLLCKFADGGPKKRQSQG 231 Score = 42.4 bits (98), Expect = 0.006 Identities = 35/143 (24%), Positives = 57/143 (39%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G ++ S ++++ L TD L++L Y + K I+D T + +GYGFV F Sbjct: 48 GSGGNDQLSKTNLYIRGLQPGTTDQDLVKL-CQPYGKIVSTKAILDKTTNKCKGYGFVDF 106 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLD 972 A+T + + SG Q + D TN +Y+ L Sbjct: 107 DSPSSAQKAVTAL------------------KASGVQ-AQMAKQQEQDPTN--LYISNLP 145 Query: 973 PNVSEDELRKTFAKYGDVASVKI 1041 ++ E EL +G V S +I Sbjct: 146 LSMDEQELEGMLKPFGQVISTRI 168 Score = 38.1 bits (87), Expect = 0.11 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L MDE L P G+V++ +++R+ SG S G GF S E + +F Sbjct: 139 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCEAIITHF 197 Query: 550 AG 555 G Sbjct: 198 NG 199
>Q640A2:HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 297 Score = 54.7 bits (130), Expect = 1e-06 Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 4/137 (2%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD--DIDRTHAM 822 +F+G L+ D + L E + +++ V + D TGRSRG+GFV F D +D+ Sbjct: 28 MFIGGLSWDTSKKDLTE-YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 86 Query: 823 TE--MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 E ++G P+R G P + V+VGGL P +E+++ Sbjct: 87 KEHKLDGKLID----------PKRAKALKGKEPP---------KKVFVGGLSPETTEEQI 127 Query: 997 RKTFAKYGDVASVKIPV 1047 ++ F +G++ ++++P+ Sbjct: 128 KQYFGGFGEIENIELPM 144 Score = 42.0 bits (97), Expect = 0.007 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 4/150 (2%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 DE + +++G L + + L GEVV + + +G S G+GFV F S +K Sbjct: 24 DEGK-MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDK 82 Query: 535 ALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS----DHSIFVGDLAVDVTDDMLMEL 702 L+ + KL+ + KR++ +FVG L+ + T++ + + Sbjct: 83 VLET----------KEHKLD--GKLIDPKRAKALKGKEPPKKVFVGGLSPETTEEQIKQY 130 Query: 703 FANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 F + ++ ++ +D T RG+ FV + Sbjct: 131 FGG-FGEIENIELPMDTKTNERRGFCFVTY 159
>P51992:RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 - Xenopus laevis| (African clawed frog) Length = 385 Score = 54.3 bits (129), Expect = 1e-06 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 3/153 (1%) Frame = +1 Query: 613 GEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF 792 G + E +F+G L+ + TDD L E F ++ + V+ D T RSRG+GFV Sbjct: 17 GHEPKEPEQLRKLFIGGLSFETTDDSLREHF-EQWGKLTDCVVMRDPQTKRSRGFGFV-- 73 Query: 793 GDDIDRTHAMTEMNGMYCSTRPIRIGPAT---PRRTSGDSGTSPTTQSDGDSTNRTVYVG 963 T++ E S RP ++ R S + P T + ++VG Sbjct: 74 ------TYSCVEEVDASMSARPHKVDGRVVEPKRAVSREDSARPGAHL----TVKKIFVG 123 Query: 964 GLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG 1062 G+ + E LR F YG + ++++ +Q G Sbjct: 124 GIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSG 156
>Q7TN33:CELF6_MOUSE CUG-BP- and ETR-3-like factor 6 - Mus musculus (Mouse)| Length = 460 Score = 54.3 bits (129), Expect = 1e-06 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 8/166 (4%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF---GDDIDRTHA 819 +FVG + + + L LF ++ + V+ D TG +G F+ + + A Sbjct: 48 LFVGQIPRGLDEQDLKPLF-EEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 + E + RPI++ PA S+G +R ++VG L E+++R Sbjct: 107 LHEQKTLPGMNRPIQVKPAA---------------SEGRGEDRKLFVGMLGKQQGEEDVR 151 Query: 1000 KTFAKYGDVASVKI---PVG--KQCGFVQFINRADAEEALQGLSGS 1122 + F +G + + P G K C FV+F ++ +A+ A+QGL GS Sbjct: 152 RLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGS 197 Score = 37.0 bits (84), Expect = 0.24 Identities = 21/80 (26%), Positives = 40/80 (50%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++F+ L + D L++ F + +V AKV +D T +S+ +GFV F + A+ Sbjct: 376 NLFIYHLPQEFGDAELIQTFL-PFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQ 434 Query: 826 EMNGMYCSTRPIRIGPATPR 885 MNG + +++ P+ Sbjct: 435 AMNGFQIGMKRLKVQLKRPK 454
>Q28521:ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 - Macaca mulatta (Rhesus| macaque) Length = 320 Score = 53.9 bits (128), Expect = 2e-06 Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 4/157 (2%) Frame = +1 Query: 607 SVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFV 786 S E E +F+G L+ + TD+ L F ++ ++ V+ D NT RSRG+GFV Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHF-EQWGTLTDCVVMRDPNTKRSRGFGFV 60 Query: 787 RFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 + +++ A R + A R S G T + ++VGG Sbjct: 61 TYAT-VEKVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKK--------IFVGG 111 Query: 967 LDPNVSEDELRKTFAKYGDVASVKIPV----GKQCGF 1065 + + E LR F +YG + ++I GK+ GF Sbjct: 112 IKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGF 148
>P53883:NOP13_YEAST Nucleolar protein 13 - Saccharomyces cerevisiae (Baker's yeast)| Length = 403 Score = 53.9 bits (128), Expect = 2e-06 Identities = 44/217 (20%), Positives = 98/217 (45%), Gaps = 22/217 (10%) Frame = +1 Query: 601 SYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVII----------- 747 S V +K+ + + + +++G+L+ D T D L+ F K + + K + Sbjct: 111 SGEVVKKKKKDENKYGVWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMP 170 Query: 748 -----DANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTS 912 ++N +++G+ ++ F ++++ A+ E++ + + R + I + SG Sbjct: 171 RVAAKNSNAMKNKGFCYMFF-KNVEQMKAVLELSESHLNGRNMLIKDS--ENYSGRPDKD 227 Query: 913 PTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG------FVQF 1074 + +R ++VG L +V++D LRK F GD+ +++ + G F+ F Sbjct: 228 DLVAMSKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDF 287 Query: 1075 INRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 N + L+ S I + +R+ +G + +Q R Sbjct: 288 KNEEGSTNELKDKSCRKIAGRPLRMEYGEDRSKRQVR 324
>Q8CFD1:DRBP1_RAT Developmentally-regulated RNA-binding protein 1 - Rattus norvegicus| (Rat) Length = 476 Score = 53.9 bits (128), Expect = 2e-06 Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Frame = +1 Query: 394 WMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVM-PN 570 + E+ L F P G++ I V+R++H+ S+G FV+F + A +A++ G + PN Sbjct: 35 YTSESVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPN 94 Query: 571 TDRAFKLNWA-SYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVII 747 + K+ A S S G R + + + T++ L E F Y ++ VI Sbjct: 95 DTKPIKVFIAQSRSSGSHRDVEDEELTRIFVMIPKSYTEEDLREKF-KVYGDIEYCSVIK 153 Query: 748 DANTGRSRGYGFVRF 792 + TG S+G G+VR+ Sbjct: 154 NKVTGESKGLGYVRY 168 Score = 45.4 bits (106), Expect = 7e-04 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%) Frame = +1 Query: 679 TDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYC---S 849 ++ +L E F+ + ++ V+ D +T S+G FV+F AM EM+G Sbjct: 37 SESVLREHFS-PFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPND 95 Query: 850 TRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDV- 1026 T+PI++ A R S + D + T + + +E++LR+ F YGD+ Sbjct: 96 TKPIKVFIAQSR--------SSGSHRDVEDEELTRIFVMIPKSYTEEDLREKFKVYGDIE 147 Query: 1027 --ASVKIPV---GKQCGFVQFINRADAEEALQGLSGS 1122 + +K V K G+V+++ + A +A++ S Sbjct: 148 YCSVIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRS 184 Score = 32.0 bits (71), Expect = 7.6 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +1 Query: 403 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 E L F G++ VI+N+ +G S+G G+V + + A +A++N Sbjct: 133 EEDLREKFKVYGDIEYCSVIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
>Q86SG3:DAZ4_HUMAN Deleted in azoospermia protein 4 - Homo sapiens (Human)| Length = 579 Score = 53.5 bits (127), Expect = 2e-06 Identities = 26/56 (46%), Positives = 36/56 (64%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 T++VG + MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95 Score = 53.5 bits (127), Expect = 2e-06 Identities = 26/56 (46%), Positives = 36/56 (64%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 T++VG + MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 260 Score = 49.7 bits (117), Expect = 4e-05 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 14/119 (11%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R S S ++ +Q +G TV+VGG+D + E E+ F +YG Sbjct: 6 PETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGS 65 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 V VKI V K GFV F+N D +Q + GS I +L G PA ++ + Sbjct: 66 VKEVKIITNRTGVSKGYGFVSFVNDVD----VQKIVGSQIHFHGKKLKLG--PAIRKQK 118 Score = 49.7 bits (117), Expect = 4e-05 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 14/119 (11%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R S S ++ +Q +G TV+VGG+D + E E+ F +YG Sbjct: 171 PETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGS 230 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 V VKI V K GFV F+N D +Q + GS I +L G PA ++ + Sbjct: 231 VKEVKIITNRTGVSKGYGFVSFVNDVD----VQKIVGSQIHFHGKKLKLG--PAIRKQK 283 Score = 39.3 bits (90), Expect = 0.048 Identities = 24/78 (30%), Positives = 44/78 (56%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + + + + F +Y SVK K+I + TG S+GYGFV F +D+D + Sbjct: 40 NTVFVGGIDARMDETEIGSCFG-RYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIV 97 Query: 823 TEMNGMYCSTRPIRIGPA 876 ++ + +++GPA Sbjct: 98 GSQ--IHFHGKKLKLGPA 113 Score = 39.3 bits (90), Expect = 0.048 Identities = 24/78 (30%), Positives = 44/78 (56%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + + + + F +Y SVK K+I + TG S+GYGFV F +D+D + Sbjct: 205 NTVFVGGIDARMDETEIGSCFG-RYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIV 262 Query: 823 TEMNGMYCSTRPIRIGPA 876 ++ + +++GPA Sbjct: 263 GSQ--IHFHGKKLKLGPA 278
>Q9NR90:DAZ3_HUMAN Deleted in azoospermia protein 3 - Homo sapiens (Human)| Length = 486 Score = 53.5 bits (127), Expect = 2e-06 Identities = 26/56 (46%), Positives = 36/56 (64%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 T++VG + MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95 Score = 49.7 bits (117), Expect = 4e-05 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 14/119 (11%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R S S ++ +Q +G TV+VGG+D + E E+ F +YG Sbjct: 6 PETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGS 65 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 V VKI V K GFV F+N D +Q + GS I +L G PA ++ + Sbjct: 66 VKEVKIITNRTGVSKGYGFVSFVNDVD----VQKIVGSQIHFHGKKLKLG--PAIRKQK 118 Score = 39.3 bits (90), Expect = 0.048 Identities = 24/78 (30%), Positives = 44/78 (56%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + + + + F +Y SVK K+I + TG S+GYGFV F +D+D + Sbjct: 40 NTVFVGGIDARMDETEIGSCFG-RYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIV 97 Query: 823 TEMNGMYCSTRPIRIGPA 876 ++ + +++GPA Sbjct: 98 GSQ--IHFHGKKLKLGPA 113
>Q13117:DAZ2_HUMAN Deleted in azoospermia protein 2 - Homo sapiens (Human)| Length = 558 Score = 53.5 bits (127), Expect = 2e-06 Identities = 26/56 (46%), Positives = 36/56 (64%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 T++VG + MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95 Score = 49.7 bits (117), Expect = 4e-05 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 14/119 (11%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R S S ++ +Q +G TV+VGG+D + E E+ F +YG Sbjct: 6 PETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGS 65 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 V VKI V K GFV F+N D +Q + GS I +L G PA ++ + Sbjct: 66 VKEVKIITNRTGVSKGYGFVSFVNDVD----VQKIVGSQIHFHGKKLKLG--PAIRKQK 118 Score = 39.3 bits (90), Expect = 0.048 Identities = 24/78 (30%), Positives = 44/78 (56%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + + + + F +Y SVK K+I + TG S+GYGFV F +D+D + Sbjct: 40 NTVFVGGIDARMDETEIGSCFG-RYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIV 97 Query: 823 TEMNGMYCSTRPIRIGPA 876 ++ + +++GPA Sbjct: 98 GSQ--IHFHGKKLKLGPA 113
>Q9NQZ3:DAZ1_HUMAN Deleted in azoospermia protein 1 - Homo sapiens (Human)| Length = 744 Score = 53.5 bits (127), Expect = 2e-06 Identities = 26/56 (46%), Positives = 36/56 (64%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 T++VG + MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95 Score = 53.5 bits (127), Expect = 2e-06 Identities = 26/56 (46%), Positives = 36/56 (64%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 T++VG + MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 260 Score = 53.5 bits (127), Expect = 2e-06 Identities = 26/56 (46%), Positives = 36/56 (64%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 T++VG + MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 371 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 425 Score = 49.7 bits (117), Expect = 4e-05 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 14/119 (11%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R S S ++ +Q +G TV+VGG+D + E E+ F +YG Sbjct: 6 PETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGS 65 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 V VKI V K GFV F+N D +Q + GS I +L G PA ++ + Sbjct: 66 VKEVKIITNRTGVSKGYGFVSFVNDVD----VQKIVGSQIHFHGKKLKLG--PAIRKQK 118 Score = 49.7 bits (117), Expect = 4e-05 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 14/119 (11%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R S S ++ +Q +G TV+VGG+D + E E+ F +YG Sbjct: 171 PETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGS 230 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 V VKI V K GFV F+N D +Q + GS I +L G PA ++ + Sbjct: 231 VKEVKIITNRTGVSKGYGFVSFVNDVD----VQKIVGSQIHFHGKKLKLG--PAIRKQK 283 Score = 49.7 bits (117), Expect = 4e-05 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 14/119 (11%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R S S ++ +Q +G TV+VGG+D + E E+ F +YG Sbjct: 336 PETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGS 395 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSR 1185 V VKI V K GFV F+N D +Q + GS I +L G PA ++ + Sbjct: 396 VKEVKIITNRTGVSKGYGFVSFVNDVD----VQKIVGSQIHFHGKKLKLG--PAIRKQK 448 Score = 39.3 bits (90), Expect = 0.048 Identities = 24/78 (30%), Positives = 44/78 (56%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + + + + F +Y SVK K+I + TG S+GYGFV F +D+D + Sbjct: 40 NTVFVGGIDARMDETEIGSCFG-RYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIV 97 Query: 823 TEMNGMYCSTRPIRIGPA 876 ++ + +++GPA Sbjct: 98 GSQ--IHFHGKKLKLGPA 113 Score = 39.3 bits (90), Expect = 0.048 Identities = 24/78 (30%), Positives = 44/78 (56%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + + + + F +Y SVK K+I + TG S+GYGFV F +D+D + Sbjct: 205 NTVFVGGIDARMDETEIGSCFG-RYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIV 262 Query: 823 TEMNGMYCSTRPIRIGPA 876 ++ + +++GPA Sbjct: 263 GSQ--IHFHGKKLKLGPA 278 Score = 39.3 bits (90), Expect = 0.048 Identities = 24/78 (30%), Positives = 44/78 (56%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + + + + F +Y SVK K+I + TG S+GYGFV F +D+D + Sbjct: 370 NTVFVGGIDARMDETEIGSCFG-RYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIV 427 Query: 823 TEMNGMYCSTRPIRIGPA 876 ++ + +++GPA Sbjct: 428 GSQ--IHFHGKKLKLGPA 443
>Q5RBU8:ROA2_PONPY Heterogeneous nuclear ribonucleoproteins A2/B1 - Pongo pygmaeus| (Orangutan) Length = 353 Score = 53.1 bits (126), Expect = 3e-06 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 ++ R +++G L + E L + + G++ V+R+ S S G+GFV F S A + Sbjct: 18 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 77 Query: 535 AL----QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDM 690 A+ + G V+ +V + S H +FVG + D + Sbjct: 78 AMAARPHSIDGRVVE----------PKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHH 127 Query: 691 LMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 L + F +Y + ++I D +G+ RG+GFV F D Sbjct: 128 LRDYF-EEYGKIDTIEIITDRQSGKKRGFGFVTFDD 162 Score = 52.4 bits (124), Expect = 5e-06 Identities = 38/148 (25%), Positives = 65/148 (43%) Frame = +1 Query: 619 KRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 K+ E +F+G L+ + T++ L + ++ + V+ D + RSRG+GFV F Sbjct: 13 KKREKEQFRKLFIGGLSFETTEESLRNYY-EQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71 Query: 799 DIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPN 978 + AM R + A R SG G T + ++VGG+ + Sbjct: 72 MAEVDAAMAARPHSI-DGRVVEPKRAVAREESGKPGAHVTVKK--------LFVGGIKED 122 Query: 979 VSEDELRKTFAKYGDVASVKIPVGKQCG 1062 E LR F +YG + +++I +Q G Sbjct: 123 TEEHHLRDYFEEYGKIDTIEIITDRQSG 150
>O88569:ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 - Mus musculus| (Mouse) Length = 353 Score = 53.1 bits (126), Expect = 3e-06 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 ++ R +++G L + E L + + G++ V+R+ S S G+GFV F S A + Sbjct: 18 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 77 Query: 535 AL----QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDM 690 A+ + G V+ +V + S H +FVG + D + Sbjct: 78 AMAARPHSIDGRVVE----------PKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHH 127 Query: 691 LMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 L + F +Y + ++I D +G+ RG+GFV F D Sbjct: 128 LRDYF-EEYGKIDTIEIITDRQSGKKRGFGFVTFDD 162 Score = 52.4 bits (124), Expect = 5e-06 Identities = 38/148 (25%), Positives = 65/148 (43%) Frame = +1 Query: 619 KRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 K+ E +F+G L+ + T++ L + ++ + V+ D + RSRG+GFV F Sbjct: 13 KKREKEQFRKLFIGGLSFETTEESLRNYY-EQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71 Query: 799 DIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPN 978 + AM R + A R SG G T + ++VGG+ + Sbjct: 72 MAEVDAAMAARPHSI-DGRVVEPKRAVAREESGKPGAHVTVKK--------LFVGGIKED 122 Query: 979 VSEDELRKTFAKYGDVASVKIPVGKQCG 1062 E LR F +YG + +++I +Q G Sbjct: 123 TEEHHLRDYFEEYGKIDTIEIITDRQSG 150
>P22626:ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 - Homo sapiens| (Human) Length = 353 Score = 53.1 bits (126), Expect = 3e-06 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 ++ R +++G L + E L + + G++ V+R+ S S G+GFV F S A + Sbjct: 18 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 77 Query: 535 AL----QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDM 690 A+ + G V+ +V + S H +FVG + D + Sbjct: 78 AMAARPHSIDGRVVE----------PKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHH 127 Query: 691 LMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 L + F +Y + ++I D +G+ RG+GFV F D Sbjct: 128 LRDYF-EEYGKIDTIEIITDRQSGKKRGFGFVTFDD 162 Score = 52.4 bits (124), Expect = 5e-06 Identities = 38/148 (25%), Positives = 65/148 (43%) Frame = +1 Query: 619 KRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 K+ E +F+G L+ + T++ L + ++ + V+ D + RSRG+GFV F Sbjct: 13 KKREKEQFRKLFIGGLSFETTEESLRNYY-EQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71 Query: 799 DIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPN 978 + AM R + A R SG G T + ++VGG+ + Sbjct: 72 MAEVDAAMAARPHSI-DGRVVEPKRAVAREESGKPGAHVTVKK--------LFVGGIKED 122 Query: 979 VSEDELRKTFAKYGDVASVKIPVGKQCG 1062 E LR F +YG + +++I +Q G Sbjct: 123 TEEHHLRDYFEEYGKIDTIEIITDRQSG 150
>Q2HJ60:ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 - Bos taurus| (Bovine) Length = 341 Score = 53.1 bits (126), Expect = 3e-06 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 ++ R +++G L + E L + + G++ V+R+ S S G+GFV F S A + Sbjct: 6 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 65 Query: 535 AL----QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDH----SIFVGDLAVDVTDDM 690 A+ + G V+ +V + S H +FVG + D + Sbjct: 66 AMAARPHSIDGRVVE----------PKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHH 115 Query: 691 LMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 L + F +Y + ++I D +G+ RG+GFV F D Sbjct: 116 LRDYF-EEYGKIDTIEIITDRQSGKKRGFGFVTFDD 150 Score = 50.4 bits (119), Expect = 2e-05 Identities = 36/138 (26%), Positives = 62/138 (44%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ + T++ L + ++ + V+ D + RSRG+GFV F + AM Sbjct: 11 LFIGGLSFETTEESLRNYY-EQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69 Query: 829 MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF 1008 R + A R SG G T + ++VGG+ + E LR F Sbjct: 70 RPHSI-DGRVVEPKRAVAREESGKPGAHVTVKK--------LFVGGIKEDTEEHHLRDYF 120 Query: 1009 AKYGDVASVKIPVGKQCG 1062 +YG + +++I +Q G Sbjct: 121 EEYGKIDTIEIITDRQSG 138
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus (Rat)| Length = 320 Score = 53.1 bits (126), Expect = 3e-06 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 4/157 (2%) Frame = +1 Query: 607 SVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFV 786 S E E +F+G L+ + TD+ L F ++ ++ V+ D NT RSRG+GFV Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHF-EQWGTLTDCVVMRDPNTKRSRGFGFV 60 Query: 787 RFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 + ++ A R + A R S G T + ++VGG Sbjct: 61 TYAT-VEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKK--------IFVGG 111 Query: 967 LDPNVSEDELRKTFAKYGDVASVKIPV----GKQCGF 1065 + + E LR F +YG + ++I GK+ GF Sbjct: 112 IKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGF 148
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 53.1 bits (126), Expect = 3e-06 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 4/157 (2%) Frame = +1 Query: 607 SVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFV 786 S E E +F+G L+ + TD+ L F ++ ++ V+ D NT RSRG+GFV Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHF-EQWGTLTDCVVMRDPNTKRSRGFGFV 60 Query: 787 RFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 + ++ A R + A R S G T + ++VGG Sbjct: 61 TYAT-VEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKK--------IFVGG 111 Query: 967 LDPNVSEDELRKTFAKYGDVASVKIPV----GKQCGF 1065 + + E LR F +YG + ++I GK+ GF Sbjct: 112 IKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGF 148
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 53.1 bits (126), Expect = 3e-06 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 4/157 (2%) Frame = +1 Query: 607 SVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFV 786 S E E +F+G L+ + TD+ L F ++ ++ V+ D NT RSRG+GFV Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHF-EQWGTLTDCVVMRDPNTKRSRGFGFV 60 Query: 787 RFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 + ++ A R + A R S G T + ++VGG Sbjct: 61 TYAT-VEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKK--------IFVGG 111 Query: 967 LDPNVSEDELRKTFAKYGDVASVKIPV----GKQCGF 1065 + + E LR F +YG + ++I GK+ GF Sbjct: 112 IKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGF 148
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 53.1 bits (126), Expect = 3e-06 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 4/157 (2%) Frame = +1 Query: 607 SVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFV 786 S E E +F+G L+ + TD+ L F ++ ++ V+ D NT RSRG+GFV Sbjct: 1 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHF-EQWGTLTDCVVMRDPNTKRSRGFGFV 59 Query: 787 RFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 + ++ A R + A R S G T + ++VGG Sbjct: 60 TYAT-VEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKK--------IFVGG 110 Query: 967 LDPNVSEDELRKTFAKYGDVASVKIPV----GKQCGF 1065 + + E LR F +YG + ++I GK+ GF Sbjct: 111 IKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGF 147
>Q09702:NRD1_SCHPO Negative regulator of differentiation 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 529 Score = 53.1 bits (126), Expect = 3e-06 Identities = 65/311 (20%), Positives = 131/311 (42%), Gaps = 34/311 (10%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 R +++G+L + E+ + P G + IK++ R+ FV F + A+A KA+Q Sbjct: 206 RNVFLGNLPNGITEDEIREDLEPFGPIDQIKIVTERN------IAFVHFLNIAAAIKAVQ 259 Query: 544 NFA-------GHVMPNTDR-AFKLNWASY-SVGE-------------------KRSEL-- 633 + DR A L +Y S G+ ++ +L Sbjct: 260 ELPLNPKWSKRRIYYGRDRCAVGLKQPAYFSKGQVGVVGGYPVMGYPPPSPVLQKPDLIM 319 Query: 634 ASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDID-- 807 + ++++G++ D T + + +V+G ++ + + + FV F D + Sbjct: 320 TGNRTVYIGNIHADTTIEEICN-------AVRGG-LLHNIRYLQEKHICFVTFVDPVSAF 371 Query: 808 RTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTT--QSDGDSTNRTVYVGGLDPNV 981 R M+ ++G+ R ++IG SG P+ + +R +Y+G D ++ Sbjct: 372 RFFEMSNIHGLVIRNRRLKIG------WGKHSGPLPSNIALAVAGGASRNIYIGNADDSL 425 Query: 982 SEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGR 1161 + + L++ F ++G++ V K C FV F + A A A+ + G + R+S+G+ Sbjct: 426 TIERLKEDFEEFGEIEYVNFFREKNCAFVNFTSLASAINAIDRIKQKK-GYENYRISYGK 484 Query: 1162 SPASKQSRGDS 1194 R +S Sbjct: 485 DRCGNPPRTNS 495 Score = 48.1 bits (113), Expect = 1e-04 Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 13/133 (9%) Frame = +1 Query: 823 TEMNGMYCSTRPIRIGPATPRRTSGDSG-TSPTTQS--------DGDSTN--RTVYVGGL 969 T M+G+ ST + PA P S TSP + ++T +TVYVG L Sbjct: 63 TSMHGLPFSTTQMAAAPAHPTTGYNVSRVTSPNVANFAPGYFPLPNNTTQPVKTVYVGNL 122 Query: 970 DPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQ--GLSGSTIGKQAV 1143 PN DE+ + + G + S I K C F+ F++ + A Q L TI V Sbjct: 123 PPNTPIDEI-LSCVRTGPIESAWILPEKNCAFISFLDPSHATAFFQDAALKRLTIRGTEV 181 Query: 1144 RLSWGRSPASKQS 1182 ++ WG++ AS S Sbjct: 182 KVGWGKNSASNSS 194
>P37838:NOP4_YEAST Nucleolar protein 4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 685 Score = 53.1 bits (126), Expect = 3e-06 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 27/182 (14%) Frame = +1 Query: 601 SYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYG 780 S +V ++ + ++FV + DVTD+ L + F+N + +K A V+ D N RSRG+G Sbjct: 12 SSNVSKQNDDGLDMKTLFVRSIPQDVTDEQLADFFSN-FAPIKHAVVVKDTNK-RSRGFG 69 Query: 781 FVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYV 960 FV F + D A+ + + +R+ A RR + +S +S+ + Sbjct: 70 FVSFAVEDDTKEALAKARKTKFNGHILRVDIA-KRRDRSKKTSEVVEKSTPESSEKITGQ 128 Query: 961 GGLDPNVSEDE------------------------LRKTFAKYGDVASVKIP---VGKQC 1059 D + ++ E L+K F +YG V IP GK C Sbjct: 129 NNEDEDDADGEDSMLKGKPKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLC 188 Query: 1060 GF 1065 GF Sbjct: 189 GF 190 Score = 41.2 bits (95), Expect = 0.013 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Frame = +1 Query: 529 EKALQNFAGHVMPNTDRAFKLNWASYSVGEKRS--ELASDHSIFVGDLAVDVTDDMLMEL 702 E A +N N + +++ AS + KR D S+FV ++ D T++ L Sbjct: 250 EDAEENHDDEEDENEEEDRQVDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAPH 309 Query: 703 FANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 F+ K+ SVK A +ID +TG ++G FV F D Sbjct: 310 FS-KFGSVKYALPVIDKSTGLAKGTAFVAFKD 340 Score = 32.7 bits (73), Expect = 4.5 Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 3/28 (10%) Frame = +1 Query: 724 VKGAKVIID---ANTGRSRGYGFVRFGD 798 VK AKVI++ + GRSRGYGFV F D Sbjct: 535 VKQAKVIMEVKGSTAGRSRGYGFVEFRD 562
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White| mustard) (Brassica hirta) Length = 169 Score = 53.1 bits (126), Expect = 3e-06 Identities = 31/89 (34%), Positives = 46/89 (51%) Frame = +1 Query: 640 DHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHA 819 ++ FVG LA TD+ +E +++ + +K+I D TGRSRG+GFV F D+ A Sbjct: 7 EYRCFVGGLAW-ATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDA 65 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSG 906 + MNG R I + A R + G Sbjct: 66 IEGMNGQDLDGRSITVNEAQSRGSGAGGG 94 Score = 46.6 bits (109), Expect = 3e-04 Identities = 23/61 (37%), Positives = 34/61 (55%) Frame = +1 Query: 373 WVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFA 552 +VG L + DE L + F GE+V K+I +R +G S G+GFV F S + A++ Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 553 G 555 G Sbjct: 71 G 71
>Q8IUH3:DRBP1_HUMAN Developmentally-regulated RNA-binding protein 1 - Homo sapiens| (Human) Length = 476 Score = 53.1 bits (126), Expect = 3e-06 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 2/132 (1%) Frame = +1 Query: 403 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVM-PNTDR 579 E+ L F P G++ I V+R++H+ S+G FV+F + A +A++ G + PN + Sbjct: 38 ESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTK 97 Query: 580 AFKLNWA-SYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDAN 756 K+ A S S G R + + + T++ L E F Y ++ +I + Sbjct: 98 PIKVFIAQSRSSGSHRDVEDEELTRIFVMIPKSYTEEDLREKF-KVYGDIEYCSIIKNKV 156 Query: 757 TGRSRGYGFVRF 792 TG S+G G+VR+ Sbjct: 157 TGESKGLGYVRY 168 Score = 45.4 bits (106), Expect = 7e-04 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 9/156 (5%) Frame = +1 Query: 682 DDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYC---ST 852 + +L E F+ + ++ V+ D +T S+G FV+F AM EM+G T Sbjct: 38 ESVLRERFS-PFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDT 96 Query: 853 RPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVAS 1032 +PI++ A R S + D + T + + +E++LR+ F YGD+ Sbjct: 97 KPIKVFIAQSR--------SSGSHRDVEDEELTRIFVMIPKSYTEEDLREKFKVYGDIEY 148 Query: 1033 VKI------PVGKQCGFVQFINRADAEEALQGLSGS 1122 I K G+V+++ + A +A++ S Sbjct: 149 CSIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRS 184 Score = 31.6 bits (70), Expect = 10.0 Identities = 14/48 (29%), Positives = 27/48 (56%) Frame = +1 Query: 403 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 E L F G++ +I+N+ +G S+G G+V + + A +A++N Sbjct: 133 EEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
>Q64368:DAZL_MOUSE Deleted in azoospermia-like - Mus musculus (Mouse)| Length = 298 Score = 53.1 bits (126), Expect = 3e-06 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 9/87 (10%) Frame = +1 Query: 874 ATPRRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI 1041 A R S S ++ T+Q +G TV+VGG+D + E E+R FA+YG V VKI Sbjct: 12 AVSREASTQSSSATTSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKI 71 Query: 1042 -----PVGKQCGFVQFINRADAEEALQ 1107 V K GFV F N D ++ ++ Sbjct: 72 ITDRTGVSKGYGFVSFYNDVDVQKIVE 98 Score = 52.8 bits (125), Expect = 4e-06 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ- 543 T++VG + MDE + S F G V +K+I +R +GVS+GYGFV FY+ +K ++ Sbjct: 41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 99 Query: 544 --NFAGHVMPNTDRAFKLNWASYSV 612 NF G + K N +Y V Sbjct: 100 QINFHGKKLKLGPAIRKQNLCTYHV 124 Score = 45.4 bits (106), Expect = 7e-04 Identities = 27/78 (34%), Positives = 45/78 (57%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + V + + + FA +Y SVK K+I D TG S+GYGFV F +D+D + Sbjct: 40 NTVFVGGIDVRMDETEIRSFFA-RYGSVKEVKIITD-RTGVSKGYGFVSFYNDVDVQKIV 97 Query: 823 TEMNGMYCSTRPIRIGPA 876 + + +++GPA Sbjct: 98 ESQINFH--GKKLKLGPA 113
>Q92904:DAZL_HUMAN Deleted in azoospermia-like - Homo sapiens (Human)| Length = 295 Score = 53.1 bits (126), Expect = 3e-06 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 14/93 (15%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R S S ++ T+Q +G TV+VGG+D + E E+R FA+YG Sbjct: 6 PETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGS 65 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQ 1107 V VKI V K GFV F N D ++ ++ Sbjct: 66 VKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVE 98 Score = 51.2 bits (121), Expect = 1e-05 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ- 543 T++VG + MDE + S F G V +K+I +R +GVS+GYGFV F++ +K ++ Sbjct: 41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99 Query: 544 --NFAGHVMPNTDRAFKLNWASYSV 612 NF G + K N +Y V Sbjct: 100 QINFHGKKLKLGPAIRKQNLCAYHV 124 Score = 45.4 bits (106), Expect = 7e-04 Identities = 27/78 (34%), Positives = 45/78 (57%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + V + + + FA +Y SVK K+I D TG S+GYGFV F +D+D + Sbjct: 40 NTVFVGGIDVRMDETEIRSFFA-RYGSVKEVKIITD-RTGVSKGYGFVSFFNDVDVQKIV 97 Query: 823 TEMNGMYCSTRPIRIGPA 876 + + +++GPA Sbjct: 98 ESQINFH--GKKLKLGPA 113
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 53.1 bits (126), Expect = 3e-06 Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 3/115 (2%) Frame = +1 Query: 631 LASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDR 810 ++ + +F+G L + +D L + F KY + V+ D T RSRG+GFV F + D Sbjct: 1 MSDEGKLFIGGLNFETNEDCLEQAFT-KYGRISEVVVVKDRETKRSRGFGFVTFENVDDA 59 Query: 811 THAMTEMNGMYCSTRPIRI---GPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 AM MNG R IR+ G ++ R G G G S R + GG Sbjct: 60 KDAMMAMNGKSVDGRQIRVDQAGKSSGERRGGYRG--------GSSGGRGFFRGG 106 Score = 45.1 bits (105), Expect = 9e-04 Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGL 1113 +++GGL+ +ED L + F KYG ++ V + ++ GFV F N DA++A+ + Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66 Query: 1114 SGSTIGKQAVRLSWGRSPASKQSRGDSG 1197 +G ++ + +R+ + ++ G G Sbjct: 67 NGKSVDGRQIRVDQAGKSSGERRGGYRG 94
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 52.8 bits (125), Expect = 4e-06 Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 4/190 (2%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VG + + + E+ + F P G + +I + + + +G+ FVE+ A+ AL+ Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191 Query: 550 AGHVMPNTD----RAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKY 717 G +M + R + A + E + E S + I+V + D++++ + +F + Sbjct: 192 NGALMGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEEDIKSVF-EAF 250 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSG 897 + K+ + +GYGF+ + + A+ MN + +R+G + T Sbjct: 251 GPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRVGRSI---TPP 307 Query: 898 DSGTSPTTQS 927 ++ PTT S Sbjct: 308 NALACPTTNS 317
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 52.8 bits (125), Expect = 4e-06 Identities = 43/180 (23%), Positives = 78/180 (43%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L + + L F GE+ V+R+ + S G+GFV F AS +K L Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL--- 79 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 G D ++ + + IFVG L+ + + + + F ++ V+ Sbjct: 80 -GQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYF-EQFGKVE 137 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 A ++ D T R RG+GFV F ++ D + E++ + + + A P+ GT Sbjct: 138 DAMLMFDKTTNRHRGFGFVTFENE-DVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGT 196 Score = 35.4 bits (80), Expect = 0.69 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Frame = +1 Query: 892 SGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI---PVGKQC- 1059 +G GTS + +D +++GGL S D LR F+K+G++ + P K+ Sbjct: 4 NGSPGTSGSA-NDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSR 62 Query: 1060 --GFVQFINRADAEEAL 1104 GFV F + A ++ L Sbjct: 63 GFGFVTFADPASVDKVL 79
>Q96DH6:MSI2H_HUMAN RNA-binding protein Musashi homolog 2 - Homo sapiens (Human)| Length = 328 Score = 52.8 bits (125), Expect = 4e-06 Identities = 43/180 (23%), Positives = 78/180 (43%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L + + L F GE+ V+R+ + S G+GFV F AS +K L Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL--- 79 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 G D ++ + + IFVG L+ + + + + F ++ V+ Sbjct: 80 -GQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYF-EQFGKVE 137 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGT 909 A ++ D T R RG+GFV F ++ D + E++ + + + A P+ GT Sbjct: 138 DAMLMFDKTTNRHRGFGFVTFENE-DVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGT 196 Score = 35.8 bits (81), Expect = 0.53 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Frame = +1 Query: 892 SGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI---PVGKQC- 1059 +G GTS + +D +++GGL S D LR F+K+G++ + P K+ Sbjct: 4 NGSQGTSGSA-NDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSR 62 Query: 1060 --GFVQFINRADAEEAL 1104 GFV F + A ++ L Sbjct: 63 GFGFVTFADPASVDKVL 79
>Q96J87:CELF6_HUMAN CUG-BP- and ETR-3-like factor 6 - Homo sapiens (Human)| Length = 481 Score = 52.8 bits (125), Expect = 4e-06 Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 8/166 (4%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF---GDDIDRTHA 819 +FVG + + + L LF ++ + V+ D TG +G F+ + + A Sbjct: 48 LFVGQIPRGLDEQDLKPLF-EEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 + E + RPI++ PA S+G +R ++VG L E+++R Sbjct: 107 LHEQKTLPGMNRPIQVKPAA---------------SEGRGEDRKLFVGMLGKQQGEEDVR 151 Query: 1000 KTFAKYGDVAS---VKIPVG--KQCGFVQFINRADAEEALQGLSGS 1122 + F +G + ++ P G K C FV+F ++ +A+ A++GL GS Sbjct: 152 RLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGS 197 Score = 37.0 bits (84), Expect = 0.24 Identities = 21/80 (26%), Positives = 40/80 (50%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++F+ L + D L++ F + +V AKV +D T +S+ +GFV F + A+ Sbjct: 397 NLFIYHLPQEFGDAELIQTFL-PFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQ 455 Query: 826 EMNGMYCSTRPIRIGPATPR 885 MNG + +++ P+ Sbjct: 456 AMNGFQIGMKRLKVQLKRPK 475
>Q44556:RBPD_ANASP Putative RNA-binding protein rbpD - Anabaena sp. (strain PCC 7120)| Length = 94 Score = 52.4 bits (124), Expect = 5e-06 Identities = 29/80 (36%), Positives = 44/80 (55%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 +I+VG+L+ T+ L +FA+ Y VK + D TGR RG+ FV +D A+T Sbjct: 2 TIYVGNLSYRATEADLKAVFAD-YGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAIT 60 Query: 826 EMNGMYCSTRPIRIGPATPR 885 E++G R +R+ A PR Sbjct: 61 ELDGAEWMGRQLRVNKAKPR 80 Score = 42.0 bits (97), Expect = 0.007 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG------FVQFINRADAEEALQG 1110 T+YVG L +E +L+ FA YG+V V +P ++ G FV+ A + A+ Sbjct: 2 TIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITE 61 Query: 1111 LSGSTIGKQAVRLSWGRSPASKQSRGDSGHRRN 1209 L G+ + +R++ + P RG G +++ Sbjct: 62 LDGAEWMGRQLRVNKAK-PREDDRRGSWGKKQD 93 Score = 38.1 bits (87), Expect = 0.11 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 TI+VG+L Y E L + F GEV + + +R +G G+ FVE A + A+ Sbjct: 2 TIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITE 61 Query: 547 FAG 555 G Sbjct: 62 LDG 64
>Q9D0B0:SFRS9_MOUSE Splicing factor, arginine/serine-rich 9 - Mus musculus (Mouse)| Length = 222 Score = 52.0 bits (123), Expect = 7e-06 Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 8/211 (3%) Frame = +1 Query: 595 WASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRG 774 WA GE D I+VG+L DV + L +LF KY ++ ++ N Sbjct: 5 WADERGGE------GDGRIYVGNLPSDVREKDLEDLF-YKYGRIREIEL---KNRHGLVP 54 Query: 775 YGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRT- 951 + FVRF D D A+ NG +R+ RT G G P +G T R+ Sbjct: 55 FAFVRFEDPRDAEDAIYGRNGYDYGQCRLRV---EFPRTYGGRGGWPRGARNGPPTRRSD 111 Query: 952 --VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGST 1125 V V GL P+ S +L+ + GDV + G V+++ + D E AL+ L + Sbjct: 112 FRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGM-GMVEYLRKEDMEYALRKLDDTK 170 Query: 1126 IGKQA-----VRLSWGRSPASKQSRGDSGHR 1203 +R+ RS + SR SG R Sbjct: 171 FRSHEGETSYIRVYPERSTSYGYSRSRSGSR 201 Score = 42.0 bits (97), Expect = 0.007 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGK---QCGFVQ 1071 SG + +GD +YVG L +V E +L F KYG + +++ FV+ Sbjct: 3 SGWADERGGEGDGR---IYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVR 59 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 F + DAE+A+ G +G G+ +R+ + R+ Sbjct: 60 FEDPRDAEDAIYGRNGYDYGQCRLRVEFPRT 90
>Q13242:SFRS9_HUMAN Splicing factor, arginine/serine-rich 9 - Homo sapiens (Human)| Length = 221 Score = 52.0 bits (123), Expect = 7e-06 Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 8/211 (3%) Frame = +1 Query: 595 WASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRG 774 WA GE D I+VG+L DV + L +LF KY ++ ++ N Sbjct: 4 WADERGGE------GDGRIYVGNLPTDVREKDLEDLF-YKYGRIREIEL---KNRHGLVP 53 Query: 775 YGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRT- 951 + FVRF D D A+ NG +R+ RT G G P +G T R+ Sbjct: 54 FAFVRFEDPRDAEDAIYGRNGYDYGQCRLRV---EFPRTYGGRGGWPRGGRNGPPTRRSD 110 Query: 952 --VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGST 1125 V V GL P+ S +L+ + GDV + G V+++ + D E AL+ L + Sbjct: 111 FRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ-KDGVGMVEYLRKEDMEYALRKLDDTK 169 Query: 1126 IGKQA-----VRLSWGRSPASKQSRGDSGHR 1203 +R+ RS + SR SG R Sbjct: 170 FRSHEGETSYIRVYPERSTSYGYSRSRSGSR 200 Score = 42.0 bits (97), Expect = 0.007 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGK---QCGFVQ 1071 SG + +GD +YVG L +V E +L F KYG + +++ FV+ Sbjct: 2 SGWADERGGEGDGR---IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVR 58 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 F + DAE+A+ G +G G+ +R+ + R+ Sbjct: 59 FEDPRDAEDAIYGRNGYDYGQCRLRVEFPRT 89
>O13845:RSD1_SCHPO RNA-binding protein rsd1 - Schizosaccharomyces pombe (Fission| yeast) Length = 604 Score = 52.0 bits (123), Expect = 7e-06 Identities = 46/198 (23%), Positives = 94/198 (47%), Gaps = 8/198 (4%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 + RT++V L + L+ F +G V +++R++ SG S+G +VEF S + A Sbjct: 238 DRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAA 297 Query: 538 LQNFAGHVMPNTDRAFKLNWASYS-VGEKRSELASD-------HSIFVGDLAVDVTDDML 693 + +G + +L A + + +ELA H + V ++ ++TD+ + Sbjct: 298 IA-LSGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPFHRLCVSNIHFNLTDEDV 356 Query: 694 MELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGP 873 +F + ++ + D + RS+G+G++++ + I +A+ +MNG + R +R+ Sbjct: 357 KAIF-EPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRV-- 412 Query: 874 ATPRRTSGDSGTSPTTQS 927 D T+ TT S Sbjct: 413 ----CLGNDKFTTETTSS 426
>Q15434:RBMS2_HUMAN RNA-binding motif, single-stranded-interacting protein 2 - Homo| sapiens (Human) Length = 407 Score = 52.0 bits (123), Expect = 7e-06 Identities = 42/178 (23%), Positives = 80/178 (44%) Frame = +1 Query: 400 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDR 579 D++ + C P G++V+ K I ++ + +GYGFV+F S ++A+KA+ Sbjct: 69 DQDLVKLC-QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAV------------T 115 Query: 580 AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 A K + + +++ + ++++ +L + + D+ +E + V +++ D + Sbjct: 116 ALKASGVQAQMAKQQEQ--DPTNLYISNLPLSM-DEQELEGMLKPFGQVISTRILRD-TS 171 Query: 760 GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDG 933 G SRG GF R +T NG Y T P P+ P G Q+ G Sbjct: 172 GTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQG 229 Score = 43.1 bits (100), Expect = 0.003 Identities = 36/145 (24%), Positives = 58/145 (40%) Frame = +1 Query: 607 SVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFV 786 S G ++ S ++++ L TD L++L Y + K I+D T + +GYGFV Sbjct: 44 SSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKL-CQPYGKIVSTKAILDKTTNKCKGYGFV 102 Query: 787 RFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 F A+T + + SG Q + D TN +Y+ Sbjct: 103 DFDSPSAAQKAVTAL------------------KASGVQ-AQMAKQQEQDPTN--LYISN 141 Query: 967 LDPNVSEDELRKTFAKYGDVASVKI 1041 L ++ E EL +G V S +I Sbjct: 142 LPLSMDEQELEGMLKPFGQVISTRI 166 Score = 38.1 bits (87), Expect = 0.11 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L MDE L P G+V++ +++R+ SG S G GF S E + +F Sbjct: 137 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHF 195 Query: 550 AG 555 G Sbjct: 196 NG 197
>Q91W59:RBMS1_MOUSE RNA-binding motif, single-stranded-interacting protein 1 - Mus| musculus (Mouse) Length = 403 Score = 52.0 bits (123), Expect = 7e-06 Identities = 40/161 (24%), Positives = 75/161 (46%) Frame = +1 Query: 400 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDR 579 D++ + C P G++V+ K I ++ + +GYGFV+F S A+A+KA+ Sbjct: 75 DQDLVKLC-QPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVS------------ 121 Query: 580 AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 A K N + +++ + ++++ +L + + D+ +E + V +V+ D ++ Sbjct: 122 ALKANGVQAQMAKQQEQ--DPTNLYISNLPLSM-DEQELENMLKPFGQVISTRVLRD-SS 177 Query: 760 GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATP 882 G SRG GF R + NG + T P P P Sbjct: 178 GASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 218 Score = 49.7 bits (117), Expect = 4e-05 Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 7/101 (6%) Frame = +1 Query: 865 IGPATPRRTSGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDELRKTFAKYGDVASVKI 1041 + P +P TS ++ +S ++ S D ++T +Y+ GL PN ++ +L K YG + S K Sbjct: 34 MAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKA 93 Query: 1042 PVGK---QC---GFVQFINRADAEEALQGLSGSTIGKQAVR 1146 + K +C GFV F + A A++A+ L + + Q + Sbjct: 94 ILDKATNKCKGYGFVDFDSPAAAQKAVSALKANGVQAQMAK 134 Score = 40.0 bits (92), Expect = 0.028 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 2/137 (1%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++++ L + TD L++L Y + K I+D T + +GYGFV F Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKL-CQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQK 118 Query: 817 AMTEM--NGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSED 990 A++ + NG+ Q + D TN +Y+ L ++ E Sbjct: 119 AVSALKANGVQAQM---------------------AKQQEQDPTN--LYISNLPLSMDEQ 155 Query: 991 ELRKTFAKYGDVASVKI 1041 EL +G V S ++ Sbjct: 156 ELENMLKPFGQVISTRV 172 Score = 38.9 bits (89), Expect = 0.063 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L MDE L + P G+V++ +V+R+ SG S G GF S E + +F Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRVLRD-SSGASRGVGFARMESTEKCEAVIGHF 201 Query: 550 AG 555 G Sbjct: 202 NG 203
>Q5M9F1:RBM34_RAT RNA-binding protein 34 - Rattus norvegicus (Rat)| Length = 428 Score = 52.0 bits (123), Expect = 7e-06 Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 19/214 (8%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIK-----------------VIRNRHSGVSEG 492 RT++VG+L ++ L S F G+V +++ + R H Sbjct: 183 RTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSI 242 Query: 493 YGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELAS--DHSIFVGDL 666 +V F +A KALQ + F++ + SE AS S+FVG+L Sbjct: 243 NAYVVFKEERAAAKALQRNGAQIA----EGFRIR------VDLASETASRDKRSVFVGNL 292 Query: 667 AVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYC 846 V + L E F + S+ +++ + TG RG+G+V F ++ D H ++N Sbjct: 293 PYRVDESALEEHFLD-CGSIVAVRIVRNPLTGVGRGFGYVLF-ENTDAVHLALKLNNSEL 350 Query: 847 STRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNR 948 R +R+ + + ++P+ + DG + + Sbjct: 351 MGRKLRVMRSVNKEKLKQQNSNPSVKKDGSKSKQ 384 Score = 47.4 bits (111), Expect = 2e-04 Identities = 21/62 (33%), Positives = 39/62 (62%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKA 537 + R+++VG+L Y +DE+ L F G +V ++++RN +GV G+G+V F + + A Sbjct: 283 DKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 342 Query: 538 LQ 543 L+ Sbjct: 343 LK 344
>Q6PHZ5:RB15B_MOUSE Putative RNA-binding protein 15B - Mus musculus (Mouse)| Length = 564 Score = 52.0 bits (123), Expect = 7e-06 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Frame = +1 Query: 928 DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASV--KIPVGKQCG---FVQFINRADA 1092 D R +++G LD +VSE ELR+ F KYG + V K P Q G F++F N A Sbjct: 4 DDQRATRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMA 63 Query: 1093 EEALQGLSGSTIGKQAVRLSWGRS 1164 A +SG IG+ +++ +G++ Sbjct: 64 HRAKVAMSGRVIGRNPIKIGYGKA 87 Score = 49.7 bits (117), Expect = 4e-05 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 1/169 (0%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH-AM 822 ++F+G+L V++ L F KY ++ VI G+ Y F++F ++D H A Sbjct: 11 NLFIGNLDHSVSEVELRRAF-EKYGIIEEV-VIKRPARGQGGAYAFLKF-QNLDMAHRAK 67 Query: 823 TEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRK 1002 M+G PI+IG +PTT+ ++VGGL PN S L + Sbjct: 68 VAMSGRVIGRNPIKIGYGK---------ANPTTR---------LWVGGLGPNTSLAALAR 109 Query: 1003 TFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRL 1149 F ++G + ++ G ++Q+ + A+ A + G +G RL Sbjct: 110 EFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRL 158
>Q8NDT2:RB15B_HUMAN Putative RNA-binding protein 15B - Homo sapiens (Human)| Length = 563 Score = 52.0 bits (123), Expect = 7e-06 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Frame = +1 Query: 928 DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASV--KIPVGKQCG---FVQFINRADA 1092 D R +++G LD +VSE ELR+ F KYG + V K P Q G F++F N A Sbjct: 4 DDQRATRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMA 63 Query: 1093 EEALQGLSGSTIGKQAVRLSWGRS 1164 A +SG IG+ +++ +G++ Sbjct: 64 HRAKVAMSGRVIGRNPIKIGYGKA 87 Score = 49.7 bits (117), Expect = 4e-05 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 1/169 (0%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH-AM 822 ++F+G+L V++ L F KY ++ VI G+ Y F++F ++D H A Sbjct: 11 NLFIGNLDHSVSEVELRRAF-EKYGIIEEV-VIKRPARGQGGAYAFLKF-QNLDMAHRAK 67 Query: 823 TEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRK 1002 M+G PI+IG +PTT+ ++VGGL PN S L + Sbjct: 68 VAMSGRVIGRNPIKIGYGK---------ANPTTR---------LWVGGLGPNTSLAALAR 109 Query: 1003 TFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRL 1149 F ++G + ++ G ++Q+ + A+ A + G +G RL Sbjct: 110 EFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRL 158
>Q9CQ49:NCBP2_MOUSE Nuclear cap-binding protein subunit 2 - Mus musculus (Mouse)| Length = 156 Score = 52.0 bits (123), Expect = 7e-06 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 8/91 (8%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQ----CGF--VQFINRADAEEALQG 1110 T+YVG L +E+++ + F+K GD+ + + + K CGF V++ +RADAE A++ Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 Query: 1111 LSGSTIGKQAVRLSW--GRSPASKQSRGDSG 1197 ++G+ + + +R W G + RG SG Sbjct: 101 INGTRLDDRIIRTDWDAGFKEGRQYGRGRSG 131 Score = 45.4 bits (106), Expect = 7e-04 Identities = 23/77 (29%), Positives = 43/77 (55%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 T++VG+L ++ E ++ F SG++ I + ++ + G+ FVE+YS A AE A++ Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 Query: 547 FAGHVMPNTDRAFKLNW 597 G + DR + +W Sbjct: 101 INGTRL--DDRIIRTDW 115 Score = 34.3 bits (77), Expect = 1.5 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = +1 Query: 616 EKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFG 795 E+ L +++VG+L+ T++ + ELF +K +K + +D + G+ FV + Sbjct: 31 EQEKLLKKSCTLYVGNLSFYTTEEQIYELF-SKSGDIKKIIMGLDKMKKTACGFCFVEYY 89 Query: 796 DDIDRTHAMTEMNGMYCSTRPIR 864 D +AM +NG R IR Sbjct: 90 SRADAENAMRYINGTRLDDRIIR 112
>P52298:NCBP2_HUMAN Nuclear cap-binding protein subunit 2 - Homo sapiens (Human)| Length = 156 Score = 52.0 bits (123), Expect = 7e-06 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 8/91 (8%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQ----CGF--VQFINRADAEEALQG 1110 T+YVG L +E+++ + F+K GD+ + + + K CGF V++ +RADAE A++ Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 Query: 1111 LSGSTIGKQAVRLSW--GRSPASKQSRGDSG 1197 ++G+ + + +R W G + RG SG Sbjct: 101 INGTRLDDRIIRTDWDAGFKEGRQYGRGRSG 131 Score = 45.4 bits (106), Expect = 7e-04 Identities = 23/77 (29%), Positives = 43/77 (55%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 T++VG+L ++ E ++ F SG++ I + ++ + G+ FVE+YS A AE A++ Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 Query: 547 FAGHVMPNTDRAFKLNW 597 G + DR + +W Sbjct: 101 INGTRL--DDRIIRTDW 115 Score = 34.3 bits (77), Expect = 1.5 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = +1 Query: 616 EKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFG 795 E+ L +++VG+L+ T++ + ELF +K +K + +D + G+ FV + Sbjct: 31 EQEKLLKKSCTLYVGNLSFYTTEEQIYELF-SKSGDIKKIIMGLDKMKKTACGFCFVEYY 89 Query: 796 DDIDRTHAMTEMNGMYCSTRPIR 864 D +AM +NG R IR Sbjct: 90 SRADAENAMRYINGTRLDDRIIR 112
>Q3ZBJ1:NCBP2_BOVIN Nuclear cap-binding protein subunit 2 - Bos taurus (Bovine)| Length = 156 Score = 52.0 bits (123), Expect = 7e-06 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 8/91 (8%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQ----CGF--VQFINRADAEEALQG 1110 T+YVG L +E+++ + F+K GD+ + + + K CGF V++ +RADAE A++ Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 Query: 1111 LSGSTIGKQAVRLSW--GRSPASKQSRGDSG 1197 ++G+ + + +R W G + RG SG Sbjct: 101 INGTRLDDRIIRTDWDAGFKEGRQYGRGRSG 131 Score = 45.4 bits (106), Expect = 7e-04 Identities = 23/77 (29%), Positives = 43/77 (55%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 T++VG+L ++ E ++ F SG++ I + ++ + G+ FVE+YS A AE A++ Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 Query: 547 FAGHVMPNTDRAFKLNW 597 G + DR + +W Sbjct: 101 INGTRL--DDRIIRTDW 115 Score = 34.3 bits (77), Expect = 1.5 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = +1 Query: 616 EKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFG 795 E+ L +++VG+L+ T++ + ELF +K +K + +D + G+ FV + Sbjct: 31 EQEKLLKKSCTLYVGNLSFYTTEEQIYELF-SKSGDIKKIIMGLDKMKKTACGFCFVEYY 89 Query: 796 DDIDRTHAMTEMNGMYCSTRPIR 864 D +AM +NG R IR Sbjct: 90 SRADAENAMRYINGTRLDDRIIR 112
>Q96T58:MINT_HUMAN Msx2-interacting protein - Homo sapiens (Human)| Length = 3664 Score = 52.0 bits (123), Expect = 7e-06 Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 6/188 (3%) Frame = +1 Query: 619 KRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 ++ E I V +L V TD L + ++++ + T R YG V F Sbjct: 327 EKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER-YGLVFFRQ 385 Query: 799 DIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGD---STNRTVYVGGL 969 D+ A+T G I + T ++ P + + RT+++G L Sbjct: 386 QEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNL 445 Query: 970 DPNVSEDELRKTFAKYGDVASV---KIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQA 1140 + + +LR F ++G++ + K+ Q F+Q+ + A +A++ + G +G Sbjct: 446 EKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNR 505 Query: 1141 VRLSWGRS 1164 ++L +G+S Sbjct: 506 LKLGFGKS 513 Score = 45.1 bits (105), Expect = 9e-04 Identities = 56/259 (21%), Positives = 97/259 (37%), Gaps = 15/259 (5%) Frame = +1 Query: 424 FGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVM------------P 567 F G+V ++++ H E YG V F EKAL G + P Sbjct: 359 FKKFGKVTSVQI----HGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGP 414 Query: 568 NTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVII 747 T+ + + E + + ++F+G+L T L +F I+ Sbjct: 415 ETESENEFRPLDERIDEFHPK--ATRTLFIGNLEKTTTYHDLRNIFQRFGE-------IV 465 Query: 748 DANTGRSRG---YGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPT 918 D + + G Y F+++ D A+ +M+G Y +++G G S Sbjct: 466 DIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLG----------FGKSMP 515 Query: 919 TQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEE 1098 T V++ GL NVS+ L + F +YG V V K V + A+ Sbjct: 516 TNC--------VWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQA 567 Query: 1099 ALQGLSGSTIGKQAVRLSW 1155 A++ G IG +++ + Sbjct: 568 AVKETKGRKIGGNKIKVDF 586 Score = 35.8 bits (81), Expect = 0.53 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Frame = +1 Query: 946 RTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQFINRADAEEA 1101 R ++VG L NV E+++ + F +YG V SVKI G FV F++ A++A Sbjct: 6 RHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKA 62 Score = 33.1 bits (74), Expect = 3.4 Identities = 39/168 (23%), Positives = 74/168 (44%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+++G+L+ + L + F GE+V I + + +GV + Y F+++ AS KA++ Sbjct: 438 RTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDI--KKVNGVPQ-YAFLQYCDIASVCKAIK 494 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 G + N KL + + + +++ L+ +V+D L F +Y Sbjct: 495 KMDGEYLGN--NRLKLGF---------GKSMPTNCVWLDGLSSNVSDQYLTRHFC-RYGP 542 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRI 867 V KV+ D R +G V + + A+ E G I++ Sbjct: 543 V--VKVVFD----RLKGMALVLYNEIEYAQAAVKETKGRKIGGNKIKV 584
>O43040:CTF1_SCHPO Cleavage and termination factor 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 363 Score = 52.0 bits (123), Expect = 7e-06 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Frame = +1 Query: 631 LASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDR 810 + + + +FVG++ DV++ + E+F N+ VK K+++D TG +GYGF F D Sbjct: 3 MTAGNVVFVGNIPYDVSEQQMTEIF-NQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETT 61 Query: 811 THAMTEMNGMYCSTRPIRIG-PAT-PRRTSGDSGTSPT 918 A+ ++N R IR+ P+ PRR T T Sbjct: 62 AMAVRKLNNSELGPRKIRVEFPSNDPRRNQSYEYTERT 99 Score = 39.7 bits (91), Expect = 0.037 Identities = 17/58 (29%), Positives = 32/58 (55%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 ++VG++ Y + E + F G V T K++ + +G +GYGF EF+ + A++ Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVR 66 Score = 37.7 bits (86), Expect = 0.14 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Frame = +1 Query: 937 STNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV------GKQCGFVQFINRADAEE 1098 + V+VG + +VSE ++ + F + G V + K+ + GK GF +F + Sbjct: 4 TAGNVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAM 63 Query: 1099 ALQGLSGSTIGKQAVRLSW-GRSPASKQS 1182 A++ L+ S +G + +R+ + P QS Sbjct: 64 AVRKLNNSELGPRKIRVEFPSNDPRRNQS 92
>P51989:RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 - Xenopus laevis| (African clawed frog) Length = 346 Score = 51.6 bits (122), Expect = 9e-06 Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 2/140 (1%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ + T++ L + ++ ++ V+ D + RSRG+GFV F M E Sbjct: 11 LFIGGLSFETTEESLRNYY-EQWGTLTDCVVMRDPASKRSRGFGFVTFS-------CMNE 62 Query: 829 MNGMYCSTRPIRIGPAT--PRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRK 1002 ++ +TRP I P+R + + T + ++VGG+ + E LR+ Sbjct: 63 VDAAM-ATRPHTIDGRVVEPKRAVA---REESAKPGAHVTVKKLFVGGIKEDTEEHHLRE 118 Query: 1003 TFAKYGDVASVKIPVGKQCG 1062 F +YG + S++I KQ G Sbjct: 119 YFEEYGKIDSIEIITDKQSG 138
>Q9WX37:RBPE_ANASP Putative RNA-binding protein rbpE - Anabaena sp. (strain PCC 7120)| Length = 99 Score = 51.6 bits (122), Expect = 9e-06 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 SI+VG+L+ VT D L ++F+ +Y SV ++ D TGR RG+GFV A+ Sbjct: 2 SIYVGNLSYSVTQDDLTKVFS-EYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQ 60 Query: 826 EMNGMYCSTRPIRIGPATPRRTSG-DSGTSPTTQSDG 933 ++G R +++ A PR G SG ++++G Sbjct: 61 ALDGAEWMGRVLKVNKARPREEKGARSGGGSWSRNNG 97 Score = 49.7 bits (117), Expect = 4e-05 Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 6/89 (6%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQG 1110 ++YVG L +V++D+L K F++YG V V++P ++ GFV+ + A + A+Q Sbjct: 2 SIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQA 61 Query: 1111 LSGSTIGKQAVRLSWGRSPASKQSRGDSG 1197 L G+ + ++++ R K +R G Sbjct: 62 LDGAEWMGRVLKVNKARPREEKGARSGGG 90 Score = 42.0 bits (97), Expect = 0.007 Identities = 21/63 (33%), Positives = 36/63 (57%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 +I+VG+L Y + ++ L F G V +++ +R +G G+GFVE S A+ + A+Q Sbjct: 2 SIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQA 61 Query: 547 FAG 555 G Sbjct: 62 LDG 64
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 51.6 bits (122), Expect = 9e-06 Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 14/202 (6%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 ++VG + E + F G V+ + +I+++ +G +G FV++ + A++A++ Sbjct: 122 LFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRAL 181 Query: 550 AGHV-MPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 726 + +P ++ +A GE+ + +FVG L T+ + E+F ++ V Sbjct: 182 HNQITLPGGTGPVQVRYAD---GERERIGTLEFKLFVGSLNKQATEKEVEEIFL-QFGHV 237 Query: 727 KGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYC---STRPIRIGPATPRRTS- 894 + ++ D +SRG GFV++ A+ +NG Y +P+ + A P+R Sbjct: 238 EDVYLMRDEYR-QSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPKP 296 Query: 895 GDS---------GTSPTTQSDG 933 G+S G+ P Q+ G Sbjct: 297 GESREMAPPVGLGSGPRFQASG 318 Score = 36.6 bits (83), Expect = 0.31 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Frame = +1 Query: 898 DSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQ------C 1059 D G+ T S+ ++VG + +E+E+R F ++G+V V + K+ C Sbjct: 104 DHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGC 163 Query: 1060 GFVQFINRADAEEALQGL 1113 FV++ DA+ A++ L Sbjct: 164 CFVKYATSKDADRAIRAL 181
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 51.6 bits (122), Expect = 9e-06 Identities = 25/81 (30%), Positives = 45/81 (55%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 S+FVG++ + T++ L ++F+ + SV +++ D TG+ +GYGF + D AM Sbjct: 17 SVFVGNIPYEATEEQLKDIFS-EVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 826 EMNGMYCSTRPIRIGPATPRR 888 +NG S R +R+ A + Sbjct: 76 NLNGREFSGRALRVDNAASEK 96
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 51.6 bits (122), Expect = 9e-06 Identities = 25/81 (30%), Positives = 45/81 (55%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 S+FVG++ + T++ L ++F+ + SV +++ D TG+ +GYGF + D AM Sbjct: 17 SVFVGNIPYEATEEQLKDIFS-EVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 826 EMNGMYCSTRPIRIGPATPRR 888 +NG S R +R+ A + Sbjct: 76 NLNGREFSGRALRVDNAASEK 96
>Q6DGV1:CELF4_DANRE CUG-BP- and ETR-3-like factor 4 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 520 Score = 51.6 bits (122), Expect = 9e-06 Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 8/166 (4%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRF---GDDIDRTHA 819 +F+G + ++ + L LF ++ + V+ D TG +G F+ + + A Sbjct: 49 LFIGQIPRNLDEKDLRPLF-EEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTA 107 Query: 820 MTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 + E + RPI++ PA S+ +R ++VG L+ ED++R Sbjct: 108 LHEQKTLPGMNRPIQVKPA---------------DSESRGEDRKLFVGMLNKQQCEDDVR 152 Query: 1000 KTFAKYGDVASVKIPVG-----KQCGFVQFINRADAEEALQGLSGS 1122 + F +G + I G K C FV++ A+A+ A+ L GS Sbjct: 153 RLFESFGSIEECTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGS 198 Score = 37.7 bits (86), Expect = 0.14 Identities = 21/80 (26%), Positives = 41/80 (51%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 ++F+ L + D LM++F + +V +KV +D T +S+ +GFV F + A+ Sbjct: 436 NLFIYHLPQEFGDGELMQMFL-PFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQ 494 Query: 826 EMNGMYCSTRPIRIGPATPR 885 MNG + +++ P+ Sbjct: 495 SMNGFQIGMKRLKVQLKRPK 514
>Q8VE97:SFRS4_MOUSE Splicing factor, arginine/serine-rich 4 - Mus musculus (Mouse)| Length = 489 Score = 51.2 bits (121), Expect = 1e-05 Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 22/185 (11%) Frame = +1 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGM-YCSTRPIRIGPATPRRT- 891 R KG I++ + GYGFV F D D A+ E+NG C R I PRR Sbjct: 20 RFFKGYGKILEVDL--KNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDG 77 Query: 892 ---SGDSG-----TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV 1047 SG SG + T + V L S +L+ + G+V Sbjct: 78 SYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK 137 Query: 1048 G-KQCGFVQFINRADAEEALQGLSGSTIGKQAVRL-----------SWGRSPASKQSRGD 1191 G K G ++F++ +D + AL+ L G+ + + +RL S+ RS + +SR Sbjct: 138 GRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSR 197 Query: 1192 SGHRR 1206 S H R Sbjct: 198 SRHSR 202 Score = 41.2 bits (95), Expect = 0.013 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIG 1131 VY+G L E ++ + F YG + V + G GFV+F + DA++A+ L+G + Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKNG--YGFVEFDDLRDADDAVYELNGKDLC 61 Query: 1132 KQAVRLSWGRSPASKQSRGDS----GHRRN 1209 + V + R P S G G+RR+ Sbjct: 62 GERVIVEHARGPRRDGSYGSGRSGYGYRRS 91 Score = 32.0 bits (71), Expect = 7.6 Identities = 43/197 (21%), Positives = 77/197 (39%), Gaps = 22/197 (11%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L Y E + F G+++ + + GYGFVEF A+ A+ Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDL--------KNGYGFVEFDDLRDADDAVYEL 55 Query: 550 AGHVM------------PNTDRAFKLNWASYSVGEKRS-------ELASDHSIFVGDLAV 672 G + P D ++ + Y G +RS +++ + V +L+ Sbjct: 56 NGKDLCGERVIVEHARGPRRDGSYGSGRSGY--GYRRSGRDKYGPPTRTEYRLIVENLSS 113 Query: 673 DVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCST 852 + L + Y G DA+ GR + G + F D A+ +++G + Sbjct: 114 RCSWQDLKD-----YMRQAGEVTYADAHKGR-KNEGVIEFVSYSDMKRALEKLDGTEVNG 167 Query: 853 RPIRI---GPATPRRTS 894 R IR+ P + RR S Sbjct: 168 RKIRLVEDKPGSRRRRS 184
>Q08170:SFRS4_HUMAN Splicing factor, arginine/serine-rich 4 - Homo sapiens (Human)| Length = 494 Score = 51.2 bits (121), Expect = 1e-05 Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 22/185 (11%) Frame = +1 Query: 718 RSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGM-YCSTRPIRIGPATPRRT- 891 R KG I++ + GYGFV F D D A+ E+NG C R I PRR Sbjct: 20 RFFKGYGKILEVDL--KNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDG 77 Query: 892 ---SGDSG-----TSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPV 1047 SG SG + T + V L S +L+ + G+V Sbjct: 78 SYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK 137 Query: 1048 G-KQCGFVQFINRADAEEALQGLSGSTIGKQAVRL-----------SWGRSPASKQSRGD 1191 G K G ++F++ +D + AL+ L G+ + + +RL S+ RS + +SR Sbjct: 138 GRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSR 197 Query: 1192 SGHRR 1206 S H R Sbjct: 198 SRHSR 202 Score = 41.2 bits (95), Expect = 0.013 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIG 1131 VY+G L E ++ + F YG + V + G GFV+F + DA++A+ L+G + Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKNG--YGFVEFDDLRDADDAVYELNGKDLC 61 Query: 1132 KQAVRLSWGRSPASKQSRGDS----GHRRN 1209 + V + R P S G G+RR+ Sbjct: 62 GERVIVEHARGPRRDGSYGSGRSGYGYRRS 91 Score = 32.0 bits (71), Expect = 7.6 Identities = 43/197 (21%), Positives = 77/197 (39%), Gaps = 22/197 (11%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L Y E + F G+++ + + GYGFVEF A+ A+ Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDL--------KNGYGFVEFDDLRDADDAVYEL 55 Query: 550 AGHVM------------PNTDRAFKLNWASYSVGEKRS-------ELASDHSIFVGDLAV 672 G + P D ++ + Y G +RS +++ + V +L+ Sbjct: 56 NGKDLCGERVIVEHARGPRRDGSYGSGRSGY--GYRRSGRDKYGPPTRTEYRLIVENLSS 113 Query: 673 DVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCST 852 + L + Y G DA+ GR + G + F D A+ +++G + Sbjct: 114 RCSWQDLKD-----YMRQAGEVTYADAHKGR-KNEGVIEFVSYSDMKRALEKLDGTEVNG 167 Query: 853 RPIRI---GPATPRRTS 894 R IR+ P + RR S Sbjct: 168 RKIRLVEDKPGSRRRRS 184
>P51968:RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 - Xenopus laevis| (African clawed frog) Length = 373 Score = 51.2 bits (121), Expect = 1e-05 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 3/141 (2%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ + TDD L E F ++ + V+ D T RSRG+GFV T++ E Sbjct: 29 LFIGGLSFETTDDSLREHF-EQWGKLTDCVVMRDPQTKRSRGFGFV--------TYSCVE 79 Query: 829 MNGMYCSTRPIRIGPAT---PRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 S RP ++ R S + P T + ++VGG+ + E LR Sbjct: 80 EVDASMSARPHKVDGRVVEPKRAVSREDSARPGAHL----TVKKIFVGGIKEDTEEYHLR 135 Query: 1000 KTFAKYGDVASVKIPVGKQCG 1062 YG + ++++ +Q G Sbjct: 136 DYSESYGKIETIEVMEDRQSG 156
>P51990:RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 - Xenopus laevis| (African clawed frog) Length = 358 Score = 51.2 bits (121), Expect = 1e-05 Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 6/193 (3%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L+ + T++ L F ++ + V+ D + RSRG+GFV F ++ A Sbjct: 11 LFIGGLSFETTEESLRN-FYEQWGQLTDCVVMRDPASKRSRGFGFVTFSC-MNEVDAAMS 68 Query: 829 MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF 1008 R + A R S G T + ++VGG+ + E LR+ F Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKK--------LFVGGIKEDTEEHHLREYF 120 Query: 1009 AKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPA 1170 +YG + S +I KQ GFV F N D + + TI + R Sbjct: 121 EEYGKIESTEIITDKQSGKKRGFGFVTF-NDHDPVDKIVLQKYHTINGHNAEV---RKAL 176 Query: 1171 SKQSRGDSGHRRN 1209 SKQ D + RN Sbjct: 177 SKQEMQDVQNTRN 189
>Q9P6M8:PABPX_SCHPO mRNA export factor crp79 - Schizosaccharomyces pombe (Fission yeast)| Length = 710 Score = 51.2 bits (121), Expect = 1e-05 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 18/90 (20%) Frame = +1 Query: 934 DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASV-----------------KIPV-GKQC 1059 + + T+YVG +D +S++E+ K F+KYG V S+ K P G Q Sbjct: 13 EDESSTIYVGNIDSRLSDEEIIKHFSKYGQVESIFRRLLDSFYPKEKAKPFKPPKNGVQY 72 Query: 1060 GFVQFINRADAEEALQGLSGSTIGKQAVRL 1149 GFV+F+N EE L+ G T+G++ + + Sbjct: 73 GFVKFVNAESIEEVLKDAKGMTLGQRKLTI 102 Score = 33.5 bits (75), Expect = 2.6 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 5/105 (4%) Frame = +1 Query: 661 DLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGM 840 D V L +LF+ + S+ + + N+G S+GYGFV F A +NGM Sbjct: 390 DDTVITCKSQLEDLFS-PFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRAKDTLNGM 448 Query: 841 YCSTRPIRIGPATP-----RRTSGDSGTSPTTQSDGDSTNRTVYV 960 + I + A RR PT++ N+ ++V Sbjct: 449 MVGKKRIFVCFAERKSDRIRRLQAFFANKPTSEQTAQQDNKALFV 493 Score = 33.1 bits (74), Expect = 3.4 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +1 Query: 403 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAG 555 ++ L F P G +++ + +SG+S+GYGFV F +A +A G Sbjct: 397 KSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRAKDTLNG 447
>Q6CEW9:MRD1_YARLI Multiple RNA-binding domain-containing protein 1 - Yarrowia| lipolytica (Candida lipolytica) Length = 828 Score = 51.2 bits (121), Expect = 1e-05 Identities = 35/127 (27%), Positives = 61/127 (48%) Frame = +1 Query: 463 RNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASD 642 +N+ +S G+GFVEF S +AE A + GHV+ K++ ++ A D Sbjct: 643 KNKGKFLSMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKISNRGQDEETTETKKAID 702 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 I + +L + T + +LF + S+K +V N+ SRG+ F + + HAM Sbjct: 703 SKILIKNLPFEATKKDVQKLF-GAFGSLKTVRVPKKFNS-ESRGFAFAEYVSAKEAEHAM 760 Query: 823 TEMNGMY 843 + + G + Sbjct: 761 SALQGTH 767
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 51.2 bits (121), Expect = 1e-05 Identities = 44/172 (25%), Positives = 74/172 (43%) Frame = +1 Query: 634 ASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRT 813 A +F+G+L L LF KY +V V+ + YGFV + Sbjct: 4 AGTFKLFIGNLDEKTQATELRALF-EKYGTVVECDVV--------KNYGFVHMETEQQGR 54 Query: 814 HAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDE 993 A+ +NG + I++ A RR +PTT+ ++VG L E Sbjct: 55 DAIQNLNGYTLNEFAIKVEAAKSRRAPN----TPTTK---------IFVGNLTDKTRAPE 101 Query: 994 LRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRL 1149 +R+ F KYG V V+ + + GFV D ++A++ L+G + Q +++ Sbjct: 102 VRELFQKYGTV--VECDIVRNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKV 151 Score = 50.1 bits (118), Expect = 3e-05 Identities = 45/172 (26%), Positives = 72/172 (41%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G+L L + F G VV V++N YGFV + A+QN Sbjct: 9 LFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQNL 60 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 G+ + + A K+ A +R+ IFVG+L + ELF KY +V Sbjct: 61 NGYTL--NEFAIKVEAAK----SRRAPNTPTTKIFVGNLTDKTRAPEVRELF-QKYGTVV 113 Query: 730 GAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPR 885 ++ R YGFV D A+ E+NG +P+++ +T R Sbjct: 114 ECDIV--------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSR 157 Score = 44.7 bits (104), Expect = 0.001 Identities = 24/71 (33%), Positives = 37/71 (52%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIG 1131 +++G LD ELR F KYG V V+ V K GFV +A+Q L+G T+ Sbjct: 9 LFIGNLDEKTQATELRALFEKYGTV--VECDVVKNYGFVHMETEQQGRDAIQNLNGYTLN 66 Query: 1132 KQAVRLSWGRS 1164 + A+++ +S Sbjct: 67 EFAIKVEAAKS 77
>Q95192:DAZL_MACFA Deleted in azoospermia-like - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 295 Score = 51.2 bits (121), Expect = 1e-05 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 14/93 (15%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R S S ++ +Q +G TV+VGG+D + E E+R FA+YG Sbjct: 6 PETPNSTISREASTQSSSAAASQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGS 65 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQ 1107 V VKI V K GFV F N D ++ ++ Sbjct: 66 VKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVE 98 Score = 51.2 bits (121), Expect = 1e-05 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ- 543 T++VG + MDE + S F G V +K+I +R +GVS+GYGFV F++ +K ++ Sbjct: 41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99 Query: 544 --NFAGHVMPNTDRAFKLNWASYSV 612 NF G + K N +Y V Sbjct: 100 QINFHGKKLKLGPAIRKQNLCAYHV 124 Score = 45.4 bits (106), Expect = 7e-04 Identities = 27/78 (34%), Positives = 45/78 (57%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + V + + + FA +Y SVK K+I D TG S+GYGFV F +D+D + Sbjct: 40 NTVFVGGIDVRMDETEIRSFFA-RYGSVKEVKIITD-RTGVSKGYGFVSFFNDVDVQKIV 97 Query: 823 TEMNGMYCSTRPIRIGPA 876 + + +++GPA Sbjct: 98 ESQINFH--GKKLKLGPA 113
>Q9BGN8:DAZL_CALJA Deleted in azoospermia-like - Callithrix jacchus (Common marmoset)| Length = 296 Score = 51.2 bits (121), Expect = 1e-05 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 14/93 (15%) Frame = +1 Query: 871 PATP-----RRTSGDSGTSPTTQS----DGDSTNRTVYVGGLDPNVSEDELRKTFAKYGD 1023 P TP R + S ++ T+Q +G TV+VGG+D + E E+R FA+YG Sbjct: 6 PETPNSTISREANTQSSSAATSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRGFFARYGS 65 Query: 1024 VASVKI-----PVGKQCGFVQFINRADAEEALQ 1107 V VKI V K GFV F N D ++ ++ Sbjct: 66 VKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVE 98 Score = 49.7 bits (117), Expect = 4e-05 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ- 543 T++VG + MDE + F G V +K+I +R +GVS+GYGFV F++ +K ++ Sbjct: 41 TVFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99 Query: 544 --NFAGHVMPNTDRAFKLNWASYSV 612 NF G + K N +Y V Sbjct: 100 QINFHGKKLKLGPAIRKQNLCAYHV 124 Score = 44.7 bits (104), Expect = 0.001 Identities = 27/78 (34%), Positives = 45/78 (57%) Frame = +1 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 +++FVG + V + + + FA +Y SVK K+I D TG S+GYGFV F +D+D + Sbjct: 40 NTVFVGGIDVRMDETEIRGFFA-RYGSVKEVKIITD-RTGVSKGYGFVSFFNDVDVQKIV 97 Query: 823 TEMNGMYCSTRPIRIGPA 876 + + +++GPA Sbjct: 98 ESQINFH--GKKLKLGPA 113
>Q5PQP1:RBMS1_RAT RNA-binding motif, single-stranded-interacting protein 1 - Rattus| norvegicus (Rat) Length = 403 Score = 50.8 bits (120), Expect = 2e-05 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 7/101 (6%) Frame = +1 Query: 865 IGPATPRRTSGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDELRKTFAKYGDVASVKI 1041 + P +P TS ++ +S ++ S D ++T +Y+ GL PN ++ +L K YG + S K Sbjct: 34 MAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKA 93 Query: 1042 PVGK---QC---GFVQFINRADAEEALQGLSGSTIGKQAVR 1146 + K +C GFV F + A A++A+ L S + Q + Sbjct: 94 ILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK 134 Score = 50.1 bits (118), Expect = 3e-05 Identities = 39/161 (24%), Positives = 75/161 (46%) Frame = +1 Query: 400 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDR 579 D++ + C P G++V+ K I ++ + +GYGFV+F S A+A+KA+ Sbjct: 75 DQDLVKLC-QPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVS------------ 121 Query: 580 AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 A K + + +++ + ++++ +L + + D+ +E + V +V+ D ++ Sbjct: 122 ALKASGVQAQMAKQQEQ--DPTNLYISNLPLSM-DEQELENMLKPFGQVISTRVLRD-SS 177 Query: 760 GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATP 882 G SRG GF R + NG + T P P P Sbjct: 178 GTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 218 Score = 40.0 bits (92), Expect = 0.028 Identities = 32/135 (23%), Positives = 55/135 (40%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++++ L + TD L++L Y + K I+D T + +GYGFV F Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKL-CQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQK 118 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A++ + + SG Q + D TN +Y+ L ++ E EL Sbjct: 119 AVSAL------------------KASGVQ-AQMAKQQEQDPTN--LYISNLPLSMDEQEL 157 Query: 997 RKTFAKYGDVASVKI 1041 +G V S ++ Sbjct: 158 ENMLKPFGQVISTRV 172 Score = 38.9 bits (89), Expect = 0.063 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L MDE L + P G+V++ +V+R+ SG S G GF S E + +F Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRVLRD-SSGTSRGVGFARMESTEKCEAVIGHF 201 Query: 550 AG 555 G Sbjct: 202 NG 203
>Q3ZBP3:RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1 - Bos taurus| (Bovine) Length = 403 Score = 50.8 bits (120), Expect = 2e-05 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 7/101 (6%) Frame = +1 Query: 865 IGPATPRRTSGDSGTSPTTQSDGDSTNRT-VYVGGLDPNVSEDELRKTFAKYGDVASVKI 1041 + P +P TS ++ +S ++ S D ++T +Y+ GL PN ++ +L K YG + S K Sbjct: 34 MAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKA 93 Query: 1042 PVGK---QC---GFVQFINRADAEEALQGLSGSTIGKQAVR 1146 + K +C GFV F + A A++A+ L S + Q + Sbjct: 94 ILDKTTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK 134 Score = 49.7 bits (117), Expect = 4e-05 Identities = 38/161 (23%), Positives = 75/161 (46%) Frame = +1 Query: 400 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDR 579 D++ + C P G++V+ K I ++ + +GYGFV+F S A+A+KA+ Sbjct: 75 DQDLVKLC-QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS------------ 121 Query: 580 AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 A K + + +++ + ++++ +L + + D+ +E + V +++ D ++ Sbjct: 122 ALKASGVQAQMAKQQEQ--DPTNLYISNLPLSM-DEQELENMLKPFGQVISTRILRD-SS 177 Query: 760 GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATP 882 G SRG GF R + NG + T P P P Sbjct: 178 GTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 218 Score = 41.2 bits (95), Expect = 0.013 Identities = 33/135 (24%), Positives = 55/135 (40%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++++ L + TD L++L Y + K I+D T + +GYGFV F Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKL-CQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQK 118 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A++ + + SG Q + D TN +Y+ L ++ E EL Sbjct: 119 AVSAL------------------KASGVQ-AQMAKQQEQDPTN--LYISNLPLSMDEQEL 157 Query: 997 RKTFAKYGDVASVKI 1041 +G V S +I Sbjct: 158 ENMLKPFGQVISTRI 172 Score = 38.5 bits (88), Expect = 0.082 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L MDE L + P G+V++ +++R+ SG S G GF S E + +F Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHF 201 Query: 550 AG 555 G Sbjct: 202 NG 203
>Q5PPI1:SFRS9_RAT Splicing factor, arginine/serine-rich 9 - Rattus norvegicus (Rat)| Length = 221 Score = 50.4 bits (119), Expect = 2e-05 Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 3/176 (1%) Frame = +1 Query: 595 WASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRG 774 WA GE D I+VG+L DV + L +LF KY ++ ++ N Sbjct: 4 WADERGGE------GDGRIYVGNLPTDVREKDLEDLF-YKYGRIREIEL---KNRHGLVP 53 Query: 775 YGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRT- 951 + FVRF D D A+ NG +R+ PR G G P +G T R+ Sbjct: 54 FAFVRFEDPRDAEDAIYGRNGYDYGQCRLRV--EFPRAYGGRGGW-PRASRNGPPTRRSD 110 Query: 952 --VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGL 1113 V V GL P+ S +L+ + GDV + G V+++ + D E AL+ L Sbjct: 111 FRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGM-GMVEYLRKEDMEYALRKL 165 Score = 42.0 bits (97), Expect = 0.007 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Frame = +1 Query: 901 SGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGK---QCGFVQ 1071 SG + +GD +YVG L +V E +L F KYG + +++ FV+ Sbjct: 2 SGWADERGGEGDGR---IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVR 58 Query: 1072 FINRADAEEALQGLSGSTIGKQAVRLSWGRS 1164 F + DAE+A+ G +G G+ +R+ + R+ Sbjct: 59 FEDPRDAEDAIYGRNGYDYGQCRLRVEFPRA 89
>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo| pygmaeus (Orangutan) Length = 981 Score = 50.4 bits (119), Expect = 2e-05 Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 9/181 (4%) Frame = +1 Query: 367 TIWVGDLQYWMDEN--YLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 T++V +L Y M E L F GEVV I+ I + G GY +VEF SA +AL Sbjct: 723 TVFVSNLPYSMQEPDAKLRPLFEACGEVVQIRPIFSNR-GDFRGYRYVEFKEEKSALQAL 781 Query: 541 Q----NFAGH---VMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLME 699 + + G V P D++ ++ + + S H +F+ L T + L E Sbjct: 782 EMDRKSVEGRPMFVSPCVDKSKNPDFKVF----RYSTSLEKHKLFISGLPFSCTKEELEE 837 Query: 700 LFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPAT 879 + + +VK +++ + G+ +G +V + ++ + A+ +M+GM I++ + Sbjct: 838 I-CKAHGTVKDLRLVTN-RAGKPKGLAYVEYENESQASQAVMKMDGMTIKENVIKVAISN 895 Query: 880 P 882 P Sbjct: 896 P 896
>Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 - Homo| sapiens (Human) Length = 963 Score = 50.4 bits (119), Expect = 2e-05 Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 9/181 (4%) Frame = +1 Query: 367 TIWVGDLQYWMDE--NYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 T++V +L Y M E L F GEVV I+ I + G GY +VEF SA +AL Sbjct: 705 TVFVSNLPYSMQEPDTKLRPLFEACGEVVQIRPIFSNR-GDFRGYCYVEFKEEKSALQAL 763 Query: 541 Q----NFAGH---VMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLME 699 + + G V P D++ ++ + + S H +F+ L T + L E Sbjct: 764 EMDRKSVEGRPMFVSPCVDKSKNPDFKVF----RYSTSLEKHKLFISGLPFSCTKEELEE 819 Query: 700 LFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPAT 879 + + +VK +++ + G+ +G +V + ++ + A+ +M+GM I++ + Sbjct: 820 I-CKAHGTVKDLRLVTN-RAGKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKVAISN 877 Query: 880 P 882 P Sbjct: 878 P 878
>Q62504:MINT_MOUSE Msx2-interacting protein - Mus musculus (Mouse)| Length = 3644 Score = 50.4 bits (119), Expect = 2e-05 Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 6/188 (3%) Frame = +1 Query: 619 KRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 798 ++ E I V +L V D L + ++++ G + + YG V F Sbjct: 328 EKDEPRKSFGIKVQNLPVRSIDTSLKDGLFHEFKKF-GKVTSVQIHGASEERYGLVFFRQ 386 Query: 799 DIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGD---STNRTVYVGGL 969 D+ A+T G I + T ++ P + + RT+++G L Sbjct: 387 QEDQEKALTASKGKLFFGMQIEVTAWVGPETESENEFRPLDERIDEFHPKATRTLFIGNL 446 Query: 970 DPNVSEDELRKTFAKYGDVASV---KIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQA 1140 + + +LR F ++G++ + K+ Q F+Q+ + A +A++ + G +G Sbjct: 447 EKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNR 506 Query: 1141 VRLSWGRS 1164 ++L +G+S Sbjct: 507 LKLGFGKS 514 Score = 49.7 bits (117), Expect = 4e-05 Identities = 57/259 (22%), Positives = 98/259 (37%), Gaps = 15/259 (5%) Frame = +1 Query: 424 FGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVM------------P 567 F G+V ++++ H E YG V F EKAL G + P Sbjct: 360 FKKFGKVTSVQI----HGASEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWVGP 415 Query: 568 NTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVII 747 T+ + + E + + ++F+G+L T L +F I+ Sbjct: 416 ETESENEFRPLDERIDEFHPK--ATRTLFIGNLEKTTTYHDLRNIFQRFGE-------IV 466 Query: 748 DANTGRSRG---YGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPT 918 D + + G Y F+++ D A+ +M+G Y +++G G S Sbjct: 467 DIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLG----------FGKSMP 516 Query: 919 TQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEE 1098 T V++ GL NVS+ L + F +YG V V K V + DA+ Sbjct: 517 TNC--------VWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQA 568 Query: 1099 ALQGLSGSTIGKQAVRLSW 1155 A++ G IG +++ + Sbjct: 569 AVKETKGRKIGGNKIKVDF 587 Score = 36.6 bits (83), Expect = 0.31 Identities = 40/168 (23%), Positives = 75/168 (44%) Frame = +1 Query: 364 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 543 RT+++G+L+ + L + F GE+V I + + +GV + Y F+++ AS KA++ Sbjct: 439 RTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDI--KKVNGVPQ-YAFLQYCDIASVCKAIK 495 Query: 544 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 723 G + N KL + + + +++ L+ +V+D L F +Y Sbjct: 496 KMDGEYLGN--NRLKLGF---------GKSMPTNCVWLDGLSSNVSDQYLTRHFC-RYGP 543 Query: 724 VKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRI 867 V KV+ D R +G V + + D A+ E G I++ Sbjct: 544 V--VKVVFD----RLKGMALVLYSEIEDAQAAVKETKGRKIGGNKIKV 585 Score = 35.8 bits (81), Expect = 0.53 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Frame = +1 Query: 946 RTVYVGGLDPNVSEDELRKTFAKYGDVASVKI-----PVGKQCGFVQFINRADAEEA 1101 R ++VG L NV E+++ + F +YG V SVKI G FV F++ A++A Sbjct: 6 RHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKA 62
>Q99181:HSH49_YEAST Protein HSH49 - Saccharomyces cerevisiae (Baker's yeast)| Length = 213 Score = 50.4 bits (119), Expect = 2e-05 Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 11/194 (5%) Frame = +1 Query: 355 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 534 D T++VG++ + + L+ F V+ IK +++ +GY F+EFY+ A+ Sbjct: 6 DSGNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQY 65 Query: 535 ALQNFAGHVMPNT----DRAFKLNWASYSVGEKR--SELASD-----HSIFVGDLAVDVT 681 A++ +M NT DR K+ + S G S ++ D +F+ +LA + Sbjct: 66 AIK-----IMNNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAKLFIKNLADSID 120 Query: 682 DDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPI 861 D L+++F NK+ + I + G+ + +V F D A+ +N + I Sbjct: 121 SDQLVKIF-NKFGKLIREPEIFYLSNGKLK-CAYVYFEDFEKADLAIKSLNNQLVANNRI 178 Query: 862 RIGPATPRRTSGDS 903 + A G++ Sbjct: 179 TVDYAFKENGKGNA 192 Score = 42.4 bits (98), Expect = 0.006 Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 6/179 (3%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++++VG++ +T + L ELF + V K D +GY F+ F + D + Sbjct: 7 SGNTVYVGNIDPRITKEQLYELFI-QINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQY 65 Query: 817 AMTEMNG-MYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDE 993 A+ MN + R I++ T ++G + D +++ L ++ D+ Sbjct: 66 AIKIMNNTVRLYDRLIKVRQVT--NSTGTTNLPSNISKDMILPIAKLFIKNLADSIDSDQ 123 Query: 994 LRKTFAKYGDVAS----VKIPVGK-QCGFVQFINRADAEEALQGLSGSTIGKQAVRLSW 1155 L K F K+G + + GK +C +V F + A+ A++ L+ + + + + Sbjct: 124 LVKIFNKFGKLIREPEIFYLSNGKLKCAYVYFEDFEKADLAIKSLNNQLVANNRITVDY 182 Score = 41.6 bits (96), Expect = 0.010 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 6/64 (9%) Frame = +1 Query: 934 DSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAE 1095 DS N TVYVG +DP +++++L + F + V +K P K F++F N+ DA+ Sbjct: 6 DSGN-TVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQ 64 Query: 1096 EALQ 1107 A++ Sbjct: 65 YAIK 68
>Q24491:RX21_DROME RNA-binding protein Rsf1 - Drosophila melanogaster (Fruit fly)| Length = 197 Score = 50.1 bits (118), Expect = 3e-05 Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 6/98 (6%) Frame = +1 Query: 931 GDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKI---PVGKQCGFVQFINRADAEEA 1101 GD VYVG L V +D+L F KYG + SV I P G FV+F +R DAE+A Sbjct: 2 GDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPG--FAFVEFEHRDDAEKA 59 Query: 1102 LQGLSGSTIGKQAVRLSWGRSPASKQSRG---DSGHRR 1206 L+GS + +R+ + + RG D G RR Sbjct: 60 CDILNGSELLGSQLRVEISKGRPRQGRRGGPMDRGGRR 97
>Q09511:RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 - Caenorhabditis| elegans Length = 196 Score = 50.1 bits (118), Expect = 3e-05 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%) Frame = +1 Query: 958 VGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFINRADAEEALQGLSG 1119 + L + ++LR+TF +YGD+ V IP K GFV+F R DAE AL G Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82 Query: 1120 STIGKQAVRLS---WGRSPASKQSRGDSGHRR 1206 + + +R++ + R + RG G RR Sbjct: 83 KLVDGRELRVTLAKYDRPSDERGGRGGGGGRR 114 Score = 41.6 bits (96), Expect = 0.010 Identities = 23/77 (29%), Positives = 38/77 (49%) Frame = +1 Query: 376 VGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAG 555 + +L Y N L F G++ + + R+++S S+G+GFV FY AE AL G Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82 Query: 556 HVMPNTDRAFKLNWASY 606 ++ R ++ A Y Sbjct: 83 KLVDG--RELRVTLAKY 97 Score = 38.9 bits (89), Expect = 0.063 Identities = 24/87 (27%), Positives = 42/87 (48%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 S+ + +L+ T + L F +Y + + D + +S+G+GFVRF + D HA+ Sbjct: 20 SLKIDNLSYQTTPNDLRRTF-ERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSG 906 +G R +R+ A R S + G Sbjct: 79 RTDGKLVDGRELRVTLAKYDRPSDERG 105
>Q23121:RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1 - Caenorhabditis| elegans Length = 312 Score = 50.1 bits (118), Expect = 3e-05 Identities = 27/82 (32%), Positives = 43/82 (52%) Frame = +1 Query: 952 VYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTIG 1131 +Y+G L VSE ++ F YG + V + G GFV+F ++ DAE+A+ L+G +G Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNG--FGFVEFDDKRDAEDAVHDLNGKELG 62 Query: 1132 KQAVRLSWGRSPASKQSRGDSG 1197 + V L + + RG G Sbjct: 63 GERVILDYSKPRGGGGDRGGFG 84
>P52299:NCBP2_XENLA Nuclear cap-binding protein subunit 2 - Xenopus laevis (African| clawed frog) Length = 148 Score = 50.1 bits (118), Expect = 3e-05 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 8/91 (8%) Frame = +1 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGK----QCG--FVQFINRADAEEALQG 1110 T+YVG L +E+++ + F+K GDV + + + K CG FV++ RADA A++ Sbjct: 33 TLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKVKKTACGFCFVEYYTRADAGTAMRF 92 Query: 1111 LSGSTIGKQAVRLSW--GRSPASKQSRGDSG 1197 ++G+ + + VR W G + RG SG Sbjct: 93 INGTRLDDRIVRTDWDAGFKEGRQYGRGKSG 123 Score = 43.1 bits (100), Expect = 0.003 Identities = 23/77 (29%), Positives = 42/77 (54%) Frame = +1 Query: 367 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 T++VG+L ++ E +H F SG+V I + ++ + G+ FVE+Y+ A A A++ Sbjct: 33 TLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKVKKTACGFCFVEYYTRADAGTAMRF 92 Query: 547 FAGHVMPNTDRAFKLNW 597 G + DR + +W Sbjct: 93 INGTRL--DDRIVRTDW 107 Score = 32.0 bits (71), Expect = 7.6 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = +1 Query: 616 EKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFG 795 ++ S L +++VG+L+ T++ + ELF +K VK + +D + G+ FV + Sbjct: 23 DQESLLKQSCTLYVGNLSFYTTEEQIHELF-SKSGDVKRIVMGLDKVKKTACGFCFVEYY 81 Query: 796 DDIDRTHAMTEMNGMYCSTRPIR 864 D AM +NG R +R Sbjct: 82 TRADAGTAMRFINGTRLDDRIVR 104
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 50.1 bits (118), Expect = 3e-05 Identities = 30/122 (24%), Positives = 57/122 (46%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 S+FVG++ + T++ L ++F+ + V +++ D TG+ +GYGF + D AM Sbjct: 17 SVFVGNIPYEATEEQLKDIFS-EVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 826 EMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKT 1005 +NG S R +R+ A + + + T G + Y + P + + + K Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKSLGT----GAPVIESPYGESISPEDAPESISKA 131 Query: 1006 FA 1011 A Sbjct: 132 VA 133
>P90978:U2AF2_CAEEL Splicing factor U2AF 65 kDa subunit - Caenorhabditis elegans| Length = 496 Score = 49.7 bits (117), Expect = 4e-05 Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 48/314 (15%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDEN--------YLHSCF---GPSGEVVTIKVIRNRHSGVSEGYGFV 504 ++R ++VG++ + +E +H C P ++ ++ + + + F+ Sbjct: 182 QSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQI------NLDKNFAFI 235 Query: 505 EFYS--HASAEKALQ--NFAGHVMP-NTDRAFKLNWASYSVGEKRSE----LASDHSIFV 657 EF S +A A NF G + R ++ + ++ + + + S + IF+ Sbjct: 236 EFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFI 295 Query: 658 GDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNG 837 G L +T+D + EL + + +K + +D+ G S+GY F + D A+ +NG Sbjct: 296 GGLPNYLTEDQVKELLCS-FGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAGLNG 353 Query: 838 MYCSTRP--IRIGPATPRRTSGDSGTSPTTQSDGD---STNRTVYVGGLDPNVSEDEL-- 996 M + +++ A +R + + S + + D R + L V+EDEL Sbjct: 354 MQLGDKQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKA 413 Query: 997 -----------RKTFAKYGDVASVKIP----------VGKQCGFVQFINRADAEEALQGL 1113 R +KYG V S++IP VGK FV+F + +D + A L Sbjct: 414 DDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKV--FVEFASTSDCQRAQAAL 471 Query: 1114 SGSTIGKQAVRLSW 1155 +G + V S+ Sbjct: 472 TGRKFANRTVVTSY 485
>P90727:U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit - Caenorhabditis briggsae| Length = 488 Score = 49.7 bits (117), Expect = 4e-05 Identities = 67/308 (21%), Positives = 126/308 (40%), Gaps = 42/308 (13%) Frame = +1 Query: 358 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNR-----HSGVSEGYGFVEFYS-- 516 ++R ++VG++ + +E + F + + + + + F+EF S Sbjct: 173 QSRRLYVGNIPFGCNEEAMLDFFNQQMHLCNLAQAPGNPILLCQINLDKNFAFIEFRSID 232 Query: 517 HASAEKALQ--NFAGHVMP-NTDRAFKLNWASYSVGEKR--SELASD--HSIFVGDLAVD 675 +A A NF G + R ++ + ++ + + S + D + IF+G L Sbjct: 233 ETTAGMAFDGINFMGQQLKVRRPRDYQPSQNTFDMNARMPVSSIVVDSANKIFIGGLPNY 292 Query: 676 VTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTR 855 +T+D + EL + + +K + +D+ G S+GY F + D A+ +NGM + Sbjct: 293 LTEDQVKELLCS-FGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDK 350 Query: 856 PIRIGPATPRRTS-----GDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL-------- 996 + + A +T +S ++ R + L V+EDEL Sbjct: 351 QLVVQLACANQTRHNTHLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELRSDEDYEE 410 Query: 997 -----RKTFAKYGDVASVKIP----------VGKQCGFVQFINRADAEEALQGLSGSTIG 1131 R+ +KYG V S++IP VGK FV+F +D + A L+G Sbjct: 411 ILEDVREECSKYGIVRSLEIPRPYDDHPVPGVGKV--FVEFATTSDCQRAQAALTGRKFA 468 Query: 1132 KQAVRLSW 1155 + V S+ Sbjct: 469 NRTVVTSY 476
>Q921F2:TADBP_MOUSE TAR DNA-binding protein 43 - Mus musculus (Mouse)| Length = 414 Score = 49.7 bits (117), Expect = 4e-05 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 3/180 (1%) Frame = +1 Query: 598 ASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGY 777 AS +V KR+ + I +G L T+ L + F+ + V +V D TG S+G+ Sbjct: 90 ASSAVKVKRAVQKTSDLIVLG-LPWKTTEQDLKDYFST-FGEVLMVQVKKDLKTGHSKGF 147 Query: 778 GFVRFGDDIDRTHAMTE---MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNR 948 GFVRF + + M++ ++G +C + +S SP D +R Sbjct: 148 GFVRFTEYETQVKVMSQRHMIDGRWCDCK------------LPNSKQSP----DEPLRSR 191 Query: 949 TVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSGSTI 1128 V+VG +++ +EL++ F +YG+V V IP K F+ AD ++ Q L G + Sbjct: 192 KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIP--KPFRAFAFVTFAD-DKVAQSLCGEDL 248 Score = 38.1 bits (87), Expect = 0.11 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 1/134 (0%) Frame = +1 Query: 403 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRA 582 E L F GEV+ ++V ++ +G S+G+GFV F + + K + H++ Sbjct: 117 EQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCD 174 Query: 583 FKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTG 762 KL + S E +FVG D+T + L + F +Y V +D Sbjct: 175 CKLPNSKQSPDEP----LRSRKVFVGRCTEDMTAEELQQFFC-QYGEV------VDVFIP 223 Query: 763 RS-RGYGFVRFGDD 801 + R + FV F DD Sbjct: 224 KPFRAFAFVTFADD 237
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 49.7 bits (117), Expect = 4e-05 Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +F+G L V ++ L F + ++ V+++ T RSR +GFV + +++ A Sbjct: 9 LFIGGLNVQTSESGLRGHF-EAFGTLTDCVVVVNPQTKRSRCFGFVTY-SNVEEADAAMA 66 Query: 829 MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF 1008 + + + A R S G + ++VGGL +V+E +L + F Sbjct: 67 ASPHAVDGNTVELKRAVSREDSARPGAHAKV--------KKLFVGGLKGDVAEGDLIEHF 118 Query: 1009 AKYGDVASVKIPVGKQC------GFVQFINRADAEEA----LQGLSGSTIG-KQAVR--- 1146 +++G V +I KQ GFV F N A++A + G + K+AV Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178 Query: 1147 -LSWGRSPASKQSRGDSGHR 1203 S G S+ SRG G R Sbjct: 179 IYSGGGGGGSRSSRGGRGGR 198 Score = 49.7 bits (117), Expect = 4e-05 Identities = 39/141 (27%), Positives = 66/141 (46%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++G L E+ L F G + V+ N + S +GFV + + A+ A+ Sbjct: 9 LFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAAS 68 Query: 550 AGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVK 729 V NT + S + A +FVG L DV + L+E F+ ++ +V+ Sbjct: 69 PHAVDGNTVELKRA--VSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFS-QFGTVE 125 Query: 730 GAKVIIDANTGRSRGYGFVRF 792 A++I D +G+ RG+GFV F Sbjct: 126 KAEIIADKQSGKKRGFGFVYF 146
>Q3ZC34:RBMS2_BOVIN RNA-binding motif, single-stranded-interacting protein 2 - Bos| taurus (Bovine) Length = 407 Score = 49.7 bits (117), Expect = 4e-05 Identities = 39/166 (23%), Positives = 74/166 (44%) Frame = +1 Query: 436 GEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVG 615 G++V+ K I ++ + +GYGFV+F S ++A+KA+ A K + + Sbjct: 80 GKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAV------------TALKASGVQAQMA 127 Query: 616 EKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFG 795 +++ + ++++ +L + + D+ +E + V +++ D +G SRG GF R Sbjct: 128 KQQEQ--DPTNLYISNLPLSM-DEQELEGMLKPFGQVISTRILRD-TSGTSRGVGFARME 183 Query: 796 DDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDG 933 +T NG Y T P P+ P G Q+ G Sbjct: 184 STEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQG 229 Score = 43.1 bits (100), Expect = 0.003 Identities = 36/145 (24%), Positives = 57/145 (39%) Frame = +1 Query: 607 SVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFV 786 S G + S ++++ L TD L++L Y + K I+D T + +GYGFV Sbjct: 44 SSGSTAHDQLSKTNLYIRGLQPSTTDQDLVKL-CQSYGKIVSTKAILDKTTNKCKGYGFV 102 Query: 787 RFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGG 966 F A+T + + SG Q + D TN +Y+ Sbjct: 103 DFDSPSAAQKAVTAL------------------KASGVQ-AQMAKQQEQDPTN--LYISN 141 Query: 967 LDPNVSEDELRKTFAKYGDVASVKI 1041 L ++ E EL +G V S +I Sbjct: 142 LPLSMDEQELEGMLKPFGQVISTRI 166 Score = 38.1 bits (87), Expect = 0.11 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L MDE L P G+V++ +++R+ SG S G GF S E + +F Sbjct: 137 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHF 195 Query: 550 AG 555 G Sbjct: 196 NG 197
>P29558:RBMS1_HUMAN RNA-binding motif, single-stranded-interacting protein 1 - Homo| sapiens (Human) Length = 406 Score = 49.7 bits (117), Expect = 4e-05 Identities = 38/161 (23%), Positives = 75/161 (46%) Frame = +1 Query: 400 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDR 579 D++ + C P G++V+ K I ++ + +GYGFV+F S A+A+KA+ Sbjct: 75 DQDLVKLC-QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS------------ 121 Query: 580 AFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANT 759 A K + + +++ + ++++ +L + + D+ +E + V +++ D ++ Sbjct: 122 ALKASGVQAQMAKQQEQ--DPTNLYISNLPLSM-DEQELENMLKPFGQVISTRILRD-SS 177 Query: 760 GRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATP 882 G SRG GF R + NG + T P P P Sbjct: 178 GTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 218 Score = 40.4 bits (93), Expect = 0.021 Identities = 33/135 (24%), Positives = 54/135 (40%) Frame = +1 Query: 637 SDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTH 816 S ++++ L TD L++L Y + K I+D T + +GYGFV F Sbjct: 60 SKTNLYIRGLPPHTTDQDLVKL-CQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQK 118 Query: 817 AMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDEL 996 A++ + + SG Q + D TN +Y+ L ++ E EL Sbjct: 119 AVSAL------------------KASGVQ-AQMAKQQEQDPTN--LYISNLPLSMDEQEL 157 Query: 997 RKTFAKYGDVASVKI 1041 +G V S +I Sbjct: 158 ENMLKPFGQVISTRI 172 Score = 38.5 bits (88), Expect = 0.082 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = +1 Query: 370 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 549 +++ +L MDE L + P G+V++ +++R+ SG S G GF S E + +F Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHF 201 Query: 550 AG 555 G Sbjct: 202 NG 203
>Q8BHN5:DRBP1_MOUSE Developmentally-regulated RNA-binding protein 1 - Mus musculus| (Mouse) Length = 476 Score = 49.7 bits (117), Expect = 4e-05 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%) Frame = +1 Query: 403 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVM-PNTDR 579 E L F P G++ I V+R++H+ S+G FV+F + A +A++ G + P+ + Sbjct: 38 ELVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCLGPSDTK 97 Query: 580 AFKLNWA-SYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDAN 756 K+ A S S G R + + + T++ L E F Y ++ +I + Sbjct: 98 PIKVFIAQSRSSGSHRDVEDEELTRIFVMIPKSYTEEDLREKF-KVYGDIEYCSIIKNKV 156 Query: 757 TGRSRGYGFVRF 792 TG S+G G+VR+ Sbjct: 157 TGESKGLGYVRY 168 Score = 45.8 bits (107), Expect = 5e-04 Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 9/157 (5%) Frame = +1 Query: 679 TDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMY---CS 849 T ++++ + + ++ V+ D +T S+G FV+F AM EM+G Sbjct: 36 TSELVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCLGPSD 95 Query: 850 TRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVA 1029 T+PI++ A R S + D + T + + +E++LR+ F YGD+ Sbjct: 96 TKPIKVFIAQSR--------SSGSHRDVEDEELTRIFVMIPKSYTEEDLREKFKVYGDIE 147 Query: 1030 SVKI------PVGKQCGFVQFINRADAEEALQGLSGS 1122 I K G+V+++ + A +A++ S Sbjct: 148 YCSIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRS 184 Score = 31.6 bits (70), Expect = 10.0 Identities = 14/48 (29%), Positives = 27/48 (56%) Frame = +1 Query: 403 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 546 E L F G++ +I+N+ +G S+G G+V + + A +A++N Sbjct: 133 EEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 49.7 bits (117), Expect = 4e-05 Identities = 24/81 (29%), Positives = 44/81 (54%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 S+FVG++ + T++ L ++F+ + V +++ D TG+ +GYGF + D AM Sbjct: 17 SVFVGNIPYEATEEQLKDIFS-EVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 826 EMNGMYCSTRPIRIGPATPRR 888 +NG S R +R+ A + Sbjct: 76 NLNGREFSGRALRVDNAASEK 96
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 49.7 bits (117), Expect = 4e-05 Identities = 24/81 (29%), Positives = 44/81 (54%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 S+FVG++ + T++ L ++F+ + V +++ D TG+ +GYGF + D AM Sbjct: 17 SVFVGNIPYEATEEQLKDIFS-EVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 826 EMNGMYCSTRPIRIGPATPRR 888 +NG S R +R+ A + Sbjct: 76 NLNGREFSGRALRVDNAASEK 96
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 49.7 bits (117), Expect = 4e-05 Identities = 24/81 (29%), Positives = 44/81 (54%) Frame = +1 Query: 646 SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMT 825 S+FVG++ + T++ L ++F+ + V +++ D TG+ +GYGF + D AM Sbjct: 17 SVFVGNIPYEATEEQLKDIFS-EVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 826 EMNGMYCSTRPIRIGPATPRR 888 +NG S R +R+ A + Sbjct: 76 NLNGREFSGRALRVDNAASEK 96
>Q12046:CWC2_YEAST Pre-mRNA-splicing factor CWC2 - Saccharomyces cerevisiae (Baker's| yeast) Length = 339 Score = 49.3 bits (116), Expect = 5e-05 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 9/71 (12%) Frame = +1 Query: 943 NRTVYVGGLD---------PNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAE 1095 N+T+YVGG+D P E +R F++ GD+ ++ K CGFV+F +A+AE Sbjct: 134 NKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAE 193 Query: 1096 EALQGLSGSTI 1128 A + +S T+ Sbjct: 194 FAKEAMSNQTL 204
>Q5R9H4:ACF_PONPY APOBEC1 complementation factor - Pongo pygmaeus (Orangutan)| Length = 587 Score = 49.3 bits (116), Expect = 5e-05 Identities = 54/222 (24%), Positives = 87/222 (39%), Gaps = 10/222 (4%) Frame = +1 Query: 484 SEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGD 663 + G+ FVE+ SH +A A + + ++WA V ++S ++V + Sbjct: 178 NRGFAFVEYESHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRN 237 Query: 664 LAVDVTDDMLMELFAN-KYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGM 840 L + +++M+ + F N K +V+ K I R Y FV F + D AM +NG Sbjct: 238 LMLSTSEEMIEKEFNNIKPGAVERVKKI--------RDYAFVHFSNREDAVEAMKALNGK 289 Query: 841 YCSTRPIRIGPATP-------RRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELR 999 PI + A P R T G G Q + + VY DP + Sbjct: 290 VLDGSPIEVTLAKPVDKDSYVRYTRGTGGRGTMLQGEYTYSLGQVY----DPTTTYLGAP 345 Query: 1000 KTFA--KYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSG 1119 +A Y + S+ P K + I RA + G+ G Sbjct: 346 VFYAPQAYAAIPSLHFPATKGHLSNRAIIRAPSVRGAAGVRG 387 Score = 37.4 bits (85), Expect = 0.18 Identities = 20/62 (32%), Positives = 37/62 (59%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 IF+G L D+ +D L+ L K + ++++D N G +RGY FV F + ++ +A+ + Sbjct: 58 IFIGKLPRDLFEDELIPL-CEKIGKIYEMRMMMDFN-GNNRGYAFVTFSNKLEAKNAIKQ 115 Query: 829 MN 834 +N Sbjct: 116 LN 117
>Q9NQ94:ACF_HUMAN APOBEC1 complementation factor - Homo sapiens (Human)| Length = 594 Score = 49.3 bits (116), Expect = 5e-05 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 8/157 (5%) Frame = +1 Query: 484 SEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGD 663 + G+ FVE+ SH +A A + + ++WA V ++S ++V + Sbjct: 178 NRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRN 237 Query: 664 LAVDVTDDMLMELFAN-KYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGM 840 L + +++M+ + F N K +V+ K I R Y FV F + D AM +NG Sbjct: 238 LMLSTSEEMIEKEFNNIKPGAVERVKKI--------RDYAFVHFSNREDAVEAMKALNGK 289 Query: 841 YCSTRPIRIGPATP-------RRTSGDSGTSPTTQSD 930 PI + A P R T G G Q + Sbjct: 290 VLDGSPIEVTLAKPVDKDSYVRYTRGTGGRGTMLQGE 326 Score = 37.7 bits (86), Expect = 0.14 Identities = 20/62 (32%), Positives = 37/62 (59%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 IF+G L D+ +D L+ L K + ++++D N G +RGY FV F + ++ +A+ + Sbjct: 58 IFIGKLPRDLFEDELIPL-CEKIGKIYEMRMMMDFN-GNNRGYAFVTFSNKVEAKNAIKQ 115 Query: 829 MN 834 +N Sbjct: 116 LN 117
>O14369:SCE3_SCHPO Probable RNA-binding protein sce3 - Schizosaccharomyces pombe| (Fission yeast) Length = 388 Score = 48.9 bits (115), Expect = 6e-05 Identities = 29/79 (36%), Positives = 46/79 (58%) Frame = +1 Query: 655 VGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMN 834 VG+L+ D+T++ L + F S++ ++ID T RSRG+G+V F + D A ++ Sbjct: 98 VGNLSFDLTENDLGDFFGEGVTSIR---LVIDPLTERSRGFGYVEF-ETADTLSAALALS 153 Query: 835 GMYCSTRPIRIGPATPRRT 891 G RP+RI A PRR+ Sbjct: 154 GEDLMGRPVRITVAEPRRS 172
>O22315:SFRS1_ARATH Pre-mRNA-splicing factor SF2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 303 Score = 48.5 bits (114), Expect = 8e-05 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%) Frame = +1 Query: 940 TNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQ---CGFVQFINRADAEEALQG 1110 ++RTVYVG L ++ E E+ F+KYG V + + V + FV+F + DAE+A+ G Sbjct: 5 SSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHG 64 Query: 1111 LSGSTIG--KQAVRLSWGRSPASKQSRG 1188 G + V L+ G +S +RG Sbjct: 65 RDGYDFDGHRLRVELAHGGRRSSDDTRG 92
>Q8VIJ6:SFPQ_MOUSE Splicing factor, proline- and glutamine-rich - Mus musculus (Mouse)| Length = 699 Score = 48.5 bits (114), Expect = 8e-05 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 6/120 (5%) Frame = +1 Query: 868 GPATPRRTSGDSGTSPTT---QSDGDSTNRT---VYVGGLDPNVSEDELRKTFAKYGDVA 1029 GP T + S G + G+ T ++VG L +++EDE ++ FAKYG+ Sbjct: 257 GPRTEEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPG 316 Query: 1030 SVKIPVGKQCGFVQFINRADAEEALQGLSGSTIGKQAVRLSWGRSPASKQSRGDSGHRRN 1209 V I GK GF++ +RA AE A L + + + +R+ + A+ R S + N Sbjct: 317 EVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSN 376 Score = 37.0 bits (84), Expect = 0.24 Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 5/161 (3%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +FVG+L D+T+D LFA KY + +V I+ + +G+GF++ A E Sbjct: 291 LFVGNLPADITEDEFKRLFA-KYG--EPGEVFIN----KGKGFGFIKLESRALAEIAKAE 343 Query: 829 MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTF 1008 ++ R +R+ AT + V L P VS + L + F Sbjct: 344 LDDTPMRGRQLRVRFATHA--------------------AALSVRNLSPYVSNELLEEAF 383 Query: 1009 AKYGDVASVKIPVGKQ-----CGFVQFINRADAEEALQGLS 1116 +++G + + V + G V+F ++ A +A + S Sbjct: 384 SQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCS 424
>Q9JLI8:SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 - Mus| musculus (Mouse) Length = 962 Score = 48.5 bits (114), Expect = 8e-05 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 9/181 (4%) Frame = +1 Query: 367 TIWVGDLQYWMDENY--LHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 T++V +L Y ++E L F GEVV I+ I + G GY +VEF SA++AL Sbjct: 705 TVFVSNLPYSIEEPEVKLRPLFEVCGEVVQIRPIFSNR-GDFRGYCYVEFGEEKSAQQAL 763 Query: 541 -------QNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLME 699 + V P D++ ++ + + S H +F+ L T + L + Sbjct: 764 ELDRKIVEGRPMFVSPCVDKSKNPDFKVF----RYSTTLEKHKLFISGLPFSCTKEELED 819 Query: 700 LFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPAT 879 + + +VK +++ + G+ +G +V + ++ + A+ +M+GM I++ + Sbjct: 820 I-CKAHGTVKDLRLVTN-RAGKPKGLAYVEYENESQASQAVMKMDGMTIRENVIKVAISN 877 Query: 880 P 882 P Sbjct: 878 P 878 Score = 45.4 bits (106), Expect = 7e-04 Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 8/152 (5%) Frame = +1 Query: 745 IDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQ 924 I +N G RGY +V FG++ A+ E++ RP+ + P D +P + Sbjct: 738 IFSNRGDFRGYCYVEFGEEKSAQQAL-ELDRKIVEGRPMFVSPCV------DKSKNPDFK 790 Query: 925 SDGDST---NRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVG-----KQCGFVQFIN 1080 ST +++ GL + +++EL +G V +++ K +V++ N Sbjct: 791 VFRYSTTLEKHKLFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKGLAYVEYEN 850 Query: 1081 RADAEEALQGLSGSTIGKQAVRLSWGRSPASK 1176 + A +A+ + G TI + ++++ P K Sbjct: 851 ESQASQAVMKMDGMTIRENVIKVAISNPPQRK 882
>Q9UPN6:RBM16_HUMAN Putative RNA-binding protein 16 - Homo sapiens (Human)| Length = 1271 Score = 48.5 bits (114), Expect = 8e-05 Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Frame = +1 Query: 904 GTSPTTQSDGDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINR 1083 G P + T++VG +D ++ +L F ++G + S+ + + C +V ++R Sbjct: 463 GLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHR 522 Query: 1084 ADAEEALQGLSGST--IGKQAVRLSWGRSPASK 1176 DA ALQ LS + IG + ++++W + K Sbjct: 523 QDAFRALQKLSSGSYKIGSKVIKIAWALNKGVK 555
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 48.5 bits (114), Expect = 8e-05 Identities = 35/138 (25%), Positives = 65/138 (47%) Frame = +1 Query: 463 RNRHSGVSEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASD 642 + ++ +S G+GFVEF + A + G V+ KL+ + G + + A + Sbjct: 678 KQKNKVLSMGFGFVEFRTKEQATAVISAMDGTVIDGHKIQLKLSHRQGNAGSQEKKKAKN 737 Query: 643 HSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAM 822 I V +L + T + ELF N + +K +V + +RG+ FV F + +AM Sbjct: 738 GKIIVKNLPFEATRKDVFELF-NSFGQLKSVRVPKKFDKS-ARGFAFVEFVLPKEAENAM 795 Query: 823 TEMNGMYCSTRPIRIGPA 876 ++ G++ R + + PA Sbjct: 796 DQLQGVHLLGRRLVMQPA 813
>Q5YD48:ACF_MOUSE APOBEC1 complementation factor - Mus musculus (Mouse)| Length = 595 Score = 48.5 bits (114), Expect = 8e-05 Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 7/156 (4%) Frame = +1 Query: 484 SEGYGFVEFYSHASAEKALQNFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGD 663 + G+ FVE+ SH +A A + + ++WA V ++S ++V + Sbjct: 178 NRGFAFVEYESHRAAAMARRRLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRN 237 Query: 664 LAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTEMNGMY 843 L + +++M+ + ++ S+K V + R Y FV F + D AM +NG Sbjct: 238 LMLSTSEEMIEK----EFNSIKPGAV---ERVKKIRDYAFVHFSNREDAVEAMKALNGKV 290 Query: 844 CSTRPIRIGPATP-------RRTSGDSGTSPTTQSD 930 PI + A P R T G G + Q + Sbjct: 291 LDGSPIEVTLAKPVDKDSYVRYTRGTGGRNTMLQGE 326 Score = 35.4 bits (80), Expect = 0.69 Identities = 20/62 (32%), Positives = 36/62 (58%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 IF+G L D+ +D L+ L K + ++++D N G +RGY FV F + + +A+ + Sbjct: 58 IFIGKLPRDLFEDELIPL-CEKIGKIYEMRLMMDFN-GNNRGYAFVTFSNKQEAKNAIKQ 115 Query: 829 MN 834 +N Sbjct: 116 LN 117
>Q9NEW6:RSP3_CAEEL Probable splicing factor, arginine/serine-rich 3 - Caenorhabditis| elegans Length = 258 Score = 48.1 bits (113), Expect = 1e-04 Identities = 52/206 (25%), Positives = 78/206 (37%), Gaps = 18/206 (8%) Frame = +1 Query: 634 ASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRT 813 + D ++VG+L DV + + ++F +KY +K +D +GR + FV F D D Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIF-HKYGRIK----YVDIKSGRGPAFAFVEFEDHRDAE 60 Query: 814 HAMTEMNGMYCSTRPIR------IGPATP---------RRTSGDSGTSPTTQSDGDSTNR 948 A+ +G R IR +GP P GD G R Sbjct: 61 DAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRR 120 Query: 949 TVY---VGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFINRADAEEALQGLSG 1119 T Y V GL P S +L+ GDV + G V+F D + A++ L Sbjct: 121 TGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADV-ARDGTGVVEFTRYEDVKYAVRKLDD 179 Query: 1120 STIGKQAVRLSWGRSPASKQSRGDSG 1197 + ++ R S G SG Sbjct: 180 TKFRSHEGETAYIRVREDNSSGGGSG 205 Score = 46.6 bits (109), Expect = 3e-04 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 7/98 (7%) Frame = +1 Query: 931 GDSTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGK--QCGFVQFINRADAEEAL 1104 G S ++ VYVG L +V E E+ F KYG + V I G+ FV+F + DAE+A+ Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAV 63 Query: 1105 QGLSGSTIGKQAVRLSW-----GRSPASKQSRGDSGHR 1203 + G + +R+ + R P + + HR Sbjct: 64 RARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHR 101
>P25299:RNA15_YEAST mRNA 3'-end-processing protein RNA15 - Saccharomyces cerevisiae| (Baker's yeast) Length = 296 Score = 48.1 bits (113), Expect = 1e-04 Identities = 28/99 (28%), Positives = 51/99 (51%) Frame = +1 Query: 649 IFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDIDRTHAMTE 828 +++G + D T++ +++L +N V K++ D TGRS+GY F+ F D A+ Sbjct: 20 VYLGSIPYDQTEEQILDLCSN-VGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 78 Query: 829 MNGMYCSTRPIRIGPATPRRTSGDSGTSPTTQSDGDSTN 945 +NG +R ++ G ++ S SG S Q ++ N Sbjct: 79 LNGYQLGSRFLKCGYSS---NSDISGVSQQQQQQYNNIN 114 Score = 40.8 bits (94), Expect = 0.016 Identities = 22/83 (26%), Positives = 44/83 (53%) Frame = +1 Query: 361 NRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKAL 540 +R +++G + Y E + G V+ +K++ + +G S+GY F+EF S+ A+ Sbjct: 17 SRVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAV 76 Query: 541 QNFAGHVMPNTDRAFKLNWASYS 609 +N G+ + + R K ++S S Sbjct: 77 RNLNGYQLGS--RFLKCGYSSNS 97 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 225,008,909 Number of extensions: 4451033 Number of successful extensions: 12625 Number of sequences better than 10.0: 576 Number of HSP's gapped: 11962 Number of HSP's successfully gapped: 1148 Length of query: 538 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 420 Effective length of database: 68,319,629 Effective search space: 28694244180 Effective search space used: 28694244180 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
