ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf77d07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009377.1| Triticum aestivum clone wlm96.pk030.m18:fis, full insert mRNA sequence Length = 643 Score = 1029 bits (519), Expect = 0.0 Identities = 590/614 (96%), Gaps = 6/614 (0%) Strand = Plus / Minus Query: 460 atccgcaatagacattctggagtttctgagggttatggttttgtagagttctattcccat 519 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 621 atccgcaatagacattccggagtttctgagggttatggttttgtagagttctgttcccat 562 Query: 520 gcatcagcagagaaagcacttcagaatttcgctggtcatgtaatgcctaatactgaccga 579 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 561 gcatcagcagagaaagcacttcagaattttgctggtcatgtaatgcctaatactgaccga 502 Query: 580 gcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaacttgcttct 639 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 501 gcttttaagttaaattgggcatcgtatagtgttggagaaaaacgctctgaacttgcttct 442 Query: 640 gatcactcaatttttgttggtgatctagctgttgatgttactgatgacatgttgatggaa 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 gatcactcaatttttgttggtgatctagctgttgatgttactgatgacatgttgatggaa 382 Query: 700 ctttttgctaacaaatatcgttctgtgaaaggagctaaagttattattgatgcaaacacg 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctttttgctaacaaatatcgttctgtgaaaggagctaaagttattattgatgcaaacacg 322 Query: 760 ggccgttctaggggatatggatttgttaggtttggagatgatattgacagaactcatgct 819 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 321 ggccgttctaggggctatggatttgttaggtttggagatgatattgatagaactcatgct 262 Query: 820 atgactgaaatgaatggcatgtattgctctactcgaccaattcgcattggacctgcaact 879 ||||||||||||||||| |||||||||| ||||| ||||||||||||| |||||||||| Sbjct: 261 atgactgaaatgaatggtgtgtattgctccactcggccaattcgcattgcacctgcaact 202 Query: 880 cctagaagaact------tcaggtgattctggcacctctccaacaacacaatcagatggt 933 |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 201 cctagaagaacttcagtttcaggtgattttggcacctctccaccaacacaatcagatggt 142 Query: 934 gactcaactaacaggacagtatatgttggcgggcttgaccccaatgttagtgaagatgaa 993 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 141 gactcgactaacaggacagtatatgttggcgggcttgaccccaacgttagtgaagatgaa 82 Query: 994 ctaagaaaaacatttgcaaaatatggtgatgttgcttctgtcaaaattcctgttgggaaa 1053 ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 ctaaggaaagcatttgcgaaatatggtgatgttgcttctgtcaaaattcctgttgggaaa 22 Query: 1054 caatgcggttttgt 1067 |||||||||||||| Sbjct: 21 caatgcggttttgt 8
>ref|NM_001053715.1| Oryza sativa (japonica cultivar-group) Os02g0567900 (Os02g0567900) mRNA, partial cds Length = 1037 Score = 862 bits (435), Expect = 0.0 Identities = 696/783 (88%) Strand = Plus / Plus Query: 556 catgtaatgcctaatactgaccgagcttttaagttaaattgggcatcatatagtgttgga 615 ||||||||||||||||| |||||||||||||||||||| |||||||||||||| | ||| Sbjct: 1 catgtaatgcctaataccgaccgagcttttaagttaaactgggcatcatatagcatggga 60 Query: 616 gaaaaacgctctgaacttgcttctgatcactcaatttttgttggtgatctagctgttgat 675 ||||| ||| | ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 61 gaaaagcgcgccgaacttgcttctgatcactcaatatttgttggtgatctggctgttgat 120 Query: 676 gttactgatgacatgttgatggaactttttgctaacaaatatcgttctgtgaaaggagct 735 ||||| ||||| ||||||||||| |||||||| || ||||| || ||||||||||||||| Sbjct: 121 gttacggatgaaatgttgatggatctttttgccaaaaaataccgatctgtgaaaggagct 180 Query: 736 aaagttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttgga 795 ||||||||||||||||||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 181 aaagttattattgatgcaaacaccggacgttctaggggctacggctttgttaggtttgga 240 Query: 796 gatgatattgacagaactcatgctatgactgaaatgaatggcatgtattgctctactcga 855 ||||||| |||| ||||||||| ||||||||||||||||| ||||||||||| || Sbjct: 241 gatgataacgacaaaactcatgcgatgactgaaatgaatggtgcatattgctctacccgg 300 Query: 856 ccaattcgcattggacctgcaactcctagaagaacttcaggtgattctggcacctctcca 915 |||||||| || ||||||||||| ||||||||| ||||||||||||||||| |||| ||| Sbjct: 301 ccaattcgtataggacctgcaacacctagaagatcttcaggtgattctggctcctcgcca 360 Query: 916 acaacacaatcagatggtgactcaactaacaggacagtatatgttggcgggcttgacccc 975 ||| || |||||| ||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 361 ccaaggcagtcagatagtgactcaactaacaggacgatatatgttggcgggcttgatccc 420 Query: 976 aatgttagtgaagatgaactaagaaaaacatttgcaaaatatggtgatgttgcttctgtc 1035 || | || ||||||||||||||| ||| ||||||| || ||||||||| |||| ||||| Sbjct: 421 aacgctactgaagatgaactaaggaaagcatttgctaagtatggtgatcttgcctctgtt 480 Query: 1036 aaaattcctgttgggaaacaatgcggttttgttcagtttatcaacagagctgatgcggaa 1095 |||||||||||||| ||||| || ||||||||||| ||| |||||||| ||||||| ||| Sbjct: 481 aaaattcctgttggcaaacagtgtggttttgttcaatttgtcaacagacctgatgcagaa 540 Query: 1096 gaagcattacaagggttgagtggatcaacaattgggaagcaggctgttcgtctttcttgg 1155 |||||| | |||||||||| ||||||||||||||| |||||||| || |||||||| ||| Sbjct: 541 gaagcactgcaagggttgaatggatcaacaattggaaagcaggcagtgcgtctttcctgg 600 Query: 1156 ggccgcagtccagcaagcaaacagtctaggggtgattctggccatcgacggaatggcatg 1215 |||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||| Sbjct: 601 ggccgcagtccagcaagcaaacagtctaggggtgattccggccaccggcgcaatggcatg 660 Query: 1216 tactatggcatgcctttctacggtggatatggctatgcgtcgccagttccacacccaaac 1275 ||||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 661 tactacggtacacctttctacggtggatatggctatgcgtcgccacttccacacccaaac 720 Query: 1276 gtgtatgctgcggcttatggagcctaccctttctacggtaaccagcaactagtgagctga 1335 ||||||| || || |||||||||||||||| ||||||||||||||| || ||||| ||| Sbjct: 721 atgtatgcagcagcatatggagcctacccttactacggtaaccagcagcttgtgagttga 780 Query: 1336 tga 1338 ||| Sbjct: 781 tga 783 Score = 50.1 bits (25), Expect = 0.025 Identities = 56/65 (86%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1373 gaaaacaaggttttggtccagtaagaatactatcatgggatgacata-ctatagatggcc 1431 |||||| |||||||||||||||||| ||| || | || ||||| ||| ||||||||||| Sbjct: 811 gaaaacgaggttttggtccagtaagcatagtagcgtgtgatgagatatttatagatggcc 870 Query: 1432 ataaa 1436 ||||| Sbjct: 871 ataaa 875 Score = 46.1 bits (23), Expect = 0.39 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaaact 1574 |||||||||||||| |||||||||||| Sbjct: 991 aagaaattttgactcgctaataaaact 1017
>dbj|AK060161.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H10, full insert sequence Length = 1037 Score = 862 bits (435), Expect = 0.0 Identities = 696/783 (88%) Strand = Plus / Plus Query: 556 catgtaatgcctaatactgaccgagcttttaagttaaattgggcatcatatagtgttgga 615 ||||||||||||||||| |||||||||||||||||||| |||||||||||||| | ||| Sbjct: 1 catgtaatgcctaataccgaccgagcttttaagttaaactgggcatcatatagcatggga 60 Query: 616 gaaaaacgctctgaacttgcttctgatcactcaatttttgttggtgatctagctgttgat 675 ||||| ||| | ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 61 gaaaagcgcgccgaacttgcttctgatcactcaatatttgttggtgatctggctgttgat 120 Query: 676 gttactgatgacatgttgatggaactttttgctaacaaatatcgttctgtgaaaggagct 735 ||||| ||||| ||||||||||| |||||||| || ||||| || ||||||||||||||| Sbjct: 121 gttacggatgaaatgttgatggatctttttgccaaaaaataccgatctgtgaaaggagct 180 Query: 736 aaagttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttgga 795 ||||||||||||||||||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 181 aaagttattattgatgcaaacaccggacgttctaggggctacggctttgttaggtttgga 240 Query: 796 gatgatattgacagaactcatgctatgactgaaatgaatggcatgtattgctctactcga 855 ||||||| |||| ||||||||| ||||||||||||||||| ||||||||||| || Sbjct: 241 gatgataacgacaaaactcatgcgatgactgaaatgaatggtgcatattgctctacccgg 300 Query: 856 ccaattcgcattggacctgcaactcctagaagaacttcaggtgattctggcacctctcca 915 |||||||| || ||||||||||| ||||||||| ||||||||||||||||| |||| ||| Sbjct: 301 ccaattcgtataggacctgcaacacctagaagatcttcaggtgattctggctcctcgcca 360 Query: 916 acaacacaatcagatggtgactcaactaacaggacagtatatgttggcgggcttgacccc 975 ||| || |||||| ||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 361 ccaaggcagtcagatagtgactcaactaacaggacgatatatgttggcgggcttgatccc 420 Query: 976 aatgttagtgaagatgaactaagaaaaacatttgcaaaatatggtgatgttgcttctgtc 1035 || | || ||||||||||||||| ||| ||||||| || ||||||||| |||| ||||| Sbjct: 421 aacgctactgaagatgaactaaggaaagcatttgctaagtatggtgatcttgcctctgtt 480 Query: 1036 aaaattcctgttgggaaacaatgcggttttgttcagtttatcaacagagctgatgcggaa 1095 |||||||||||||| ||||| || ||||||||||| ||| |||||||| ||||||| ||| Sbjct: 481 aaaattcctgttggcaaacagtgtggttttgttcaatttgtcaacagacctgatgcagaa 540 Query: 1096 gaagcattacaagggttgagtggatcaacaattgggaagcaggctgttcgtctttcttgg 1155 |||||| | |||||||||| ||||||||||||||| |||||||| || |||||||| ||| Sbjct: 541 gaagcactgcaagggttgaatggatcaacaattggaaagcaggcagtgcgtctttcctgg 600 Query: 1156 ggccgcagtccagcaagcaaacagtctaggggtgattctggccatcgacggaatggcatg 1215 |||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||| Sbjct: 601 ggccgcagtccagcaagcaaacagtctaggggtgattccggccaccggcgcaatggcatg 660 Query: 1216 tactatggcatgcctttctacggtggatatggctatgcgtcgccagttccacacccaaac 1275 ||||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 661 tactacggtacacctttctacggtggatatggctatgcgtcgccacttccacacccaaac 720 Query: 1276 gtgtatgctgcggcttatggagcctaccctttctacggtaaccagcaactagtgagctga 1335 ||||||| || || |||||||||||||||| ||||||||||||||| || ||||| ||| Sbjct: 721 atgtatgcagcagcatatggagcctacccttactacggtaaccagcagcttgtgagttga 780 Query: 1336 tga 1338 ||| Sbjct: 781 tga 783 Score = 50.1 bits (25), Expect = 0.025 Identities = 56/65 (86%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1373 gaaaacaaggttttggtccagtaagaatactatcatgggatgacata-ctatagatggcc 1431 |||||| |||||||||||||||||| ||| || | || ||||| ||| ||||||||||| Sbjct: 811 gaaaacgaggttttggtccagtaagcatagtagcgtgtgatgagatatttatagatggcc 870 Query: 1432 ataaa 1436 ||||| Sbjct: 871 ataaa 875 Score = 46.1 bits (23), Expect = 0.39 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaaact 1574 |||||||||||||| |||||||||||| Sbjct: 991 aagaaattttgactcgctaataaaact 1017
>ref|NM_001059469.1| Oryza sativa (japonica cultivar-group) Os04g0449900 (Os04g0449900) mRNA, complete cds Length = 1632 Score = 753 bits (380), Expect = 0.0 Identities = 845/1000 (84%) Strand = Plus / Plus Query: 334 ggatccggcgggaacggaggtgacgagaaccggacgatctgggtcggcgacctccagtac 393 ||||||||||||||||| | || |||||| |||||||||||| |||||||||||||| Sbjct: 357 ggatccggcgggaacgggtgcgaggagaacaagacgatctgggttggcgacctccagtat 416 Query: 394 tggatggacgagaactacctccacagctgcttcggccccagcggcgaggtcgtgacgatt 453 ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 417 tggatggacgagaactacctccacagctgtttcggacccagcggcgaggtagtgacgata 476 Query: 454 aaagttatccgcaatagacattctggagtttctgagggttatggttttgtagagttctat 513 |||||||||||||||||||| ||||| || ||||| |||||||||||||||||||| Sbjct: 477 aaagttatccgcaatagacaaactggacaatccgagggatatggttttgtagagttctac 536 Query: 514 tcccatgcatcagcagagaaagcacttcagaatttcgctggtcatgtaatgcctaatact 573 || || | ||| |||||||| || ||||||||||| |||||||||| |||||||| ||| Sbjct: 537 tctcacggatcggcagagaaggctcttcagaattttactggtcatgtgatgcctaacact 596 Query: 574 gaccgagcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaactt 633 || ||| |||| |||||||| ||||| |||||||| | || ||||| || |||||| || Sbjct: 597 gatcgacctttcaagttaaactgggcttcatatagcatgggtgaaaagcgatctgaagtt 656 Query: 634 gcttctgatcactcaatttttgttggtgatctagctgttgatgttactgatgacatgttg 693 |||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||| Sbjct: 657 gcttctgactactcaattttcgttggtgatctagctgctgatgttactgatgaaatgttg 716 Query: 694 atggaactttttgctaacaaatatcgttctgtgaaaggagctaaagttattattgatgca 753 ||||| ||||||||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 717 atggagctttttgctaataagtaccgctctgtgaaaggagctaaagttattattgatgca 776 Query: 754 aacacgggccgttctaggggatatggatttgttaggtttggagatgatattgacagaact 813 ||||| |||||||||||||| ||||| |||||||| ||||||||||| | ||||| | | Sbjct: 777 aacacaggccgttctaggggctatgggtttgttagatttggagatgacaatgacaaatcc 836 Query: 814 catgctatgactgaaatgaatggcatgtattgctctactcgaccaattcgcattggacct 873 ||||| ||||||||||||||||| ||||||||||||| | |||||||| ||||||||| Sbjct: 837 catgcaatgactgaaatgaatggtgcgtattgctctactaggccaattcgtattggacct 896 Query: 874 gcaactcctagaagaacttcaggtgattctggcacctctccaacaacacaatcagatggt 933 |||||||| ||||| ||||||||||||||||| |||| || | || |||||||| Sbjct: 897 gcaactcccagaaggtcttcaggtgattctggctcctcaacacctgggcattcagatggc 956 Query: 934 gactcaactaacaggacagtatatgttggcgggcttgaccccaatgttagtgaagatgaa 993 || || |||||||| || ||||||||||| ||||| || || ||||| || |||||||| Sbjct: 957 gattctactaacagaacggtatatgttggtgggctcgatccaaatgtcagcgaagatgag 1016 Query: 994 ctaagaaaaacatttgcaaaatatggtgatgttgcttctgtcaaaattcctgttgggaaa 1053 || || || ||||||| ||||||||||||||||| ||||| ||||||||| | ||||| Sbjct: 1017 ctgaggaaggcatttgccaaatatggtgatgttgcctctgtaaaaattcctctagggaag 1076 Query: 1054 caatgcggttttgttcagtttatcaacagagctgatgcggaagaagcattacaagggttg 1113 ||||| || |||||||| || ||| |||| ||||||||||||||||| | ||||| ||| Sbjct: 1077 caatgtggctttgttcaattcgtcagcagaactgatgcggaagaagcactgcaaggattg 1136 Query: 1114 agtggatcaacaattgggaagcaggctgttcgtctttcttggggccgcagtccagcaagc 1173 | ||||||| ||||| |||||||| ||||| ||||| ||||||||||| ||| || Sbjct: 1137 aatggatcagtcattggaaagcaggcagttcgcctttcatggggccgcagcccatcacat 1196 Query: 1174 aaacagtctaggggtgattctggccatcgacggaatggcatgtactatggcatgcctttc 1233 ||||||||||||| |||||||||| ||| | || ||||||||||| | ||| ||| Sbjct: 1197 aaacagtctagggctgattctggcagccgaagaaacaatatgtactatgggacgccattc 1256 Query: 1234 tacggtggatatggctatgcgtcgccagttccacacccaaacgtgtatgctgcggcttat 1293 ||||||||||| || ||||| || || || || ||||| ||| |||||||||| || ||| Sbjct: 1257 tacggtggatacggttatgcctcccccgtcccgcaccctaacatgtatgctgctgcatat 1316 Query: 1294 ggagcctaccctttctacggtaaccagcaactagtgagct 1333 |||||||||||| |||| || | ||||| |||||||||| Sbjct: 1317 ggagcctaccctgtctatggcagtcagcagctagtgagct 1356 Score = 60.0 bits (30), Expect = 3e-05 Identities = 89/108 (82%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 177 gcacccgcatcctcaccaccacatgccgcagccgcggtgggtggtacttccctacccgcc 236 ||||||||| || ||||||| |||| ||||| |||||||||| || || || |||||||| Sbjct: 173 gcacccgcacccgcaccaccccatggcgcaggcgcggtgggtcgtcctgccttacccgcc 232 Query: 237 ---gccgccgcctatggtggccacgccgccccctcctacgccgcagta 281 ||||||||| ||||||||| | ||||| || || |||||||||| Sbjct: 233 tccgccgccgcccatggtggccgctccgccgcccccgccgccgcagta 280 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaa 1571 |||||||||||||||||||||||| Sbjct: 1573 aagaaattttgacttgctaataaa 1596
>gb|AY109533.1| Zea mays CL775_1 mRNA sequence Length = 1689 Score = 747 bits (377), Expect = 0.0 Identities = 730/853 (85%) Strand = Plus / Plus Query: 361 aaccggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagc 420 |||||||| |||||||| |||||||| ||||||||||||||||| ||||| || |||||| Sbjct: 401 aaccggaccatctgggtgggcgacctgcagtactggatggacgaaaactatcttcacagc 460 Query: 421 tgcttcggccccagcggcgaggtcgtgacgattaaagttatccgcaatagacattctgga 480 ||||||||| | ||||||||||| |||| |||||||| || ||||||||||| || ||| Sbjct: 461 tgcttcggctctagcggcgaggtggtgaatattaaagtcattcgcaatagacactcggga 520 Query: 481 gtttctgagggttatggttttgtagagttctattcccatgcatcagcagagaaagcactt 540 ||||||||||||||||||||| ||||||| ||| | || | ||||||||||| ||||| Sbjct: 521 gtttctgagggttatggttttatagagttttatactcacgtttcagcagagaaggcactg 580 Query: 541 cagaatttcgctggtcatgtaatgcctaatactgaccgagcttttaagttaaattgggca 600 ||||| ||||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 581 cagaannnnnctggtcacgtaatgcctaatactgaccgggcttttaagttaaactgggca 640 Query: 601 tcatatagtgttggagaaaaacgctctgaacttgcttctgatcactcaatttttgttggt 660 ||||||||| | |||| ||||| ||| || | ||||||||||| || |||||||| Sbjct: 641 tcatatagtatgggagnnnnncgctcggaaatttcgtctgatcactcgatatttgttggc 700 Query: 661 gatctagctgttgatgttactgatgacatgttgatggaactttttgctaacaaatatcgt 720 ||| | ||||||||||||||||||| |||||| |||||| |||||||||| || Sbjct: 701 gatttggctgttgatgttactgatgcgatgttgctggaacnnnnnnctaacaaataccga 760 Query: 721 tctgtgaaaggagctaaagttattattgatgcaaacacgggccgttctaggggatatgga 780 || ||||||||||||||||||||||||||||||||||| ||||||||||| || || || Sbjct: 761 tcggtgaaaggagctaaagttattattgatgcaaacacaggccgttctagaggctacggc 820 Query: 781 tttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaatggcatg 840 |||||||||||||||||||||| ||||| || |||||| ||||||||||||||||| | Sbjct: 821 tttgttaggtttggagatgataatgacaaaattcatgcaatgactgaaatgaatggtgtt 880 Query: 841 tattgctctactcgaccaattcgcattggacctgcaactcctagaagaacttcaggtgat 900 || || || || |||||||||| | ||||| || |||||||||||| || ||||||| Sbjct: 881 tactgttccacaagaccaattcgtgtaggaccagcgactcctagaagatctcaaggtgat 940 Query: 901 tctggcacctctccaacaacacaatcagatggtgactcaactaacaggacagtatatgtt 960 |||||||| |||||| ||| ||||| ||| |||||| ||||||||||| ||||||||| Sbjct: 941 tctggcacttctccaccaaggcaatctcatgttgactctactaacaggacggtatatgtt 1000 Query: 961 ggcgggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaaaatatggt 1020 || |||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| Sbjct: 1001 ggtgggcttgaccccaatgttagcgaagatgaactgaggaaagcatttgcaaaatatggt 1060 Query: 1021 gatgttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaac 1080 ||| |||| ||||||||||||||| ||||||||||||| || |||||||| ||| | ||| Sbjct: 1061 gatcttgcctctgtcaaaattccttttgggaaacaatgtgggtttgttcaatttgtaaac 1120 Query: 1081 agagctgatgcggaagaagcattacaagggttgagtggatcaacaattgggaagcaggct 1140 |||| |||||| ||||||||| | || ||||||| ||||||||| |||||||||||||| Sbjct: 1121 agagttgatgctgaagaagcactgcatgggttgaatggatcaactattgggaagcaggca 1180 Query: 1141 gttcgtctttcttggggccgcagtccagcaagcaaacagtctaggggtgattctggccat 1200 ||||| ||||| ||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 1181 gttcgactttcctggggccgcagccctgcaagtaaacagtctaggggtgattctggccac 1240 Query: 1201 cgacggaatggca 1213 || || ||||||| Sbjct: 1241 cggcgcaatggca 1253 Score = 79.8 bits (40), Expect = 3e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 1210 ggcatgtactatggcatgcctttctacggtggatatggctatgcgtcgccagttccacac 1269 ||||||||||| || | || |||||||||||||||||||| || || || |||| ||| Sbjct: 1262 ggcatgtactacgggacaccattctacggtggatatggctacgcctccccgattccgcac 1321 Query: 1270 ccaaacgtgtatgctgcggcttatggagcctaccctttctacggtaaccagcaactagtg 1329 |||||| |||| || ||||| || | ||||||||| | ||| || |||||||| |||||| Sbjct: 1322 ccaaacatgtacgccgcggcctacgaagcctacccgtactatgggaaccagcagctagtg 1381 Query: 1330 agctgatg 1337 |||||||| Sbjct: 1382 agctgatg 1389 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1472 ctgcagatttgtgttgctagtagaacctaaa 1502 ||||||||||||| ||||||||||||||||| Sbjct: 1546 ctgcagatttgtgctgctagtagaacctaaa 1576 Score = 46.1 bits (23), Expect = 0.39 Identities = 35/39 (89%) Strand = Plus / Plus Query: 183 gcatcctcaccaccacatgccgcagccgcggtgggtggt 221 |||||| || ||||| |||||||| |||||||||||||| Sbjct: 223 gcatccgcatcaccatatgccgcaaccgcggtgggtggt 261
>dbj|AK069926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036B01, full insert sequence Length = 1632 Score = 745 bits (376), Expect = 0.0 Identities = 844/1000 (84%) Strand = Plus / Plus Query: 334 ggatccggcgggaacggaggtgacgagaaccggacgatctgggtcggcgacctccagtac 393 ||||||||||||||||| | || |||||| |||||||||||| |||||||||||||| Sbjct: 357 ggatccggcgggaacgggtgcgaggagaacaagacgatctgggttggcgacctccagtat 416 Query: 394 tggatggacgagaactacctccacagctgcttcggccccagcggcgaggtcgtgacgatt 453 ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 417 tggatggacgagaactacctccacagctgtttcggacccagcggcgaggtagtgacgata 476 Query: 454 aaagttatccgcaatagacattctggagtttctgagggttatggttttgtagagttctat 513 |||||||||||||||||||| ||||| || ||||| |||||||||||||||||||| Sbjct: 477 aaagttatccgcaatagacaaactggacaatccgagggatatggttttgtagagttctac 536 Query: 514 tcccatgcatcagcagagaaagcacttcagaatttcgctggtcatgtaatgcctaatact 573 || || | ||| |||||||| || ||||||||||| |||||||||| |||||||| ||| Sbjct: 537 tctcacggatcggcagagaaggctcttcagaattttactggtcatgtgatgcctaacact 596 Query: 574 gaccgagcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaactt 633 || ||| |||| |||||||| ||||| |||||||| | || ||||| || |||||| || Sbjct: 597 gatcgacctttcaagttaaactgggcttcatatagcatgggtgaaaagcgatctgaagtt 656 Query: 634 gcttctgatcactcaatttttgttggtgatctagctgttgatgttactgatgacatgttg 693 |||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||| Sbjct: 657 gcttctgactactcaattttcgttggtgatctagctgctgatgttactgatgaaatgttg 716 Query: 694 atggaactttttgctaacaaatatcgttctgtgaaaggagctaaagttattattgatgca 753 ||||| ||||||||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 717 atggagctttttgctaataagtaccgctctgtgaaaggagctaaagttattattgatgca 776 Query: 754 aacacgggccgttctaggggatatggatttgttaggtttggagatgatattgacagaact 813 ||||| |||||||||||||| ||||| |||||||| ||||||||||| | ||||| | | Sbjct: 777 aacacaggccgttctaggggctatgggtttgttagatttggagatgacaatgacaaatcc 836 Query: 814 catgctatgactgaaatgaatggcatgtattgctctactcgaccaattcgcattggacct 873 ||||| ||||||||||||||||| ||||||||||||| | |||||||| ||||||||| Sbjct: 837 catgcaatgactgaaatgaatggtgcgtattgctctactaggccaattcgtattggacct 896 Query: 874 gcaactcctagaagaacttcaggtgattctggcacctctccaacaacacaatcagatggt 933 |||||||| ||||| ||||||||||||||||| |||| || | || |||||||| Sbjct: 897 gcaactcccagaaggtcttcaggtgattctggctcctcaacacctgggcattcagatggc 956 Query: 934 gactcaactaacaggacagtatatgttggcgggcttgaccccaatgttagtgaagatgaa 993 || || |||||||| || ||||||||||| ||||| || || ||||| || |||||||| Sbjct: 957 gattctactaacagaacggtatatgttggtgggctcgatccaaatgtcagcgaagatgag 1016 Query: 994 ctaagaaaaacatttgcaaaatatggtgatgttgcttctgtcaaaattcctgttgggaaa 1053 || || || ||||||| ||||||||||||||||| ||||| ||||||||| | ||||| Sbjct: 1017 ctgaggaaggcatttgccaaatatggtgatgttgcctctgtaaaaattcctctagggaag 1076 Query: 1054 caatgcggttttgttcagtttatcaacagagctgatgcggaagaagcattacaagggttg 1113 ||||| || |||||||| || ||| |||| ||||||||||||||||| | ||||| ||| Sbjct: 1077 caatgtggctttgttcaattcgtcagcagaactgatgcggaagaagcactgcaaggattg 1136 Query: 1114 agtggatcaacaattgggaagcaggctgttcgtctttcttggggccgcagtccagcaagc 1173 | ||||||| ||||| |||||||| ||||| ||||| ||||||||||| ||| || Sbjct: 1137 aatggatcagtcattggaaagcaggcagttcgcctttcatggggccgcagcccatcacat 1196 Query: 1174 aaacagtctaggggtgattctggccatcgacggaatggcatgtactatggcatgcctttc 1233 | ||||||||||| |||||||||| ||| | || ||||||||||| | ||| ||| Sbjct: 1197 agacagtctagggctgattctggcagccgaagaaacaatatgtactatgggacgccattc 1256 Query: 1234 tacggtggatatggctatgcgtcgccagttccacacccaaacgtgtatgctgcggcttat 1293 ||||||||||| || ||||| || || || || ||||| ||| |||||||||| || ||| Sbjct: 1257 tacggtggatacggttatgcctcccccgtcccgcaccctaacatgtatgctgctgcatat 1316 Query: 1294 ggagcctaccctttctacggtaaccagcaactagtgagct 1333 |||||||||||| |||| || | ||||| |||||||||| Sbjct: 1317 ggagcctaccctgtctatggcagtcagcagctagtgagct 1356 Score = 54.0 bits (27), Expect = 0.002 Identities = 92/113 (81%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 172 cacgggcacccgcatcctcaccaccacatgccgcagccgcggtgggtggtacttccctac 231 |||| |||| |||| || ||||||| |||| ||||| |||||||||| || || || ||| Sbjct: 168 cacgcgcacacgcacccgcaccaccccatggcgcaggcgcggtgggtcgtcctgccttac 227 Query: 232 ccgcc---gccgccgcctatggtggccacgccgccccctcctacgccgcagta 281 ||||| ||||||||| ||||||||| | ||||| || || |||||||||| Sbjct: 228 ccgcctccgccgccgcccatggtggccgctccgccgcccccgccgccgcagta 280 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaa 1571 |||||||||||||||||||||||| Sbjct: 1573 aagaaattttgacttgctaataaa 1596
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 537 bits (271), Expect = e-149 Identities = 403/447 (90%) Strand = Plus / Plus Query: 451 attaaagttatccgcaatagacattctggagtttctgagggttatggttttgtagagttc 510 ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 21617426 attaaagttattcgtaatagacattctggagtttctgagggttatggttttgttgagttc 21617485 Query: 511 tattcccatgcatcagcagagaaagcacttcagaatttcgctggtcatgtaatgcctaat 570 | ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 21617486 ttttctcatgcatcagcagagaaagcactccagaatttttctggtcatgtaatgcctaat 21617545 Query: 571 actgaccgagcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaa 630 || |||||||||||||||||||| |||||||||||||| | |||||||| ||| | ||| Sbjct: 21617546 accgaccgagcttttaagttaaactgggcatcatatagcatgggagaaaagcgcgccgaa 21617605 Query: 631 cttgcttctgatcactcaatttttgttggtgatctagctgttgatgttactgatgacatg 690 |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||| Sbjct: 21617606 cttgcttctgatcactcaatatttgttggtgatctggctgttgatgttacggatgaaatg 21617665 Query: 691 ttgatggaactttttgctaacaaatatcgttctgtgaaaggagctaaagttattattgat 750 |||||||| |||||||| || ||||| || |||||||||||||||||||||||||||||| Sbjct: 21617666 ttgatggatctttttgccaaaaaataccgatctgtgaaaggagctaaagttattattgat 21617725 Query: 751 gcaaacacgggccgttctaggggatatggatttgttaggtttggagatgatattgacaga 810 |||||||| || ||||||||||| || || |||||||||||||||||||||| |||| | Sbjct: 21617726 gcaaacaccggacgttctaggggctacggctttgttaggtttggagatgataacgacaaa 21617785 Query: 811 actcatgctatgactgaaatgaatggcatgtattgctctactcgaccaattcgcattgga 870 |||||||| ||||||||||||||||| ||||||||||| || |||||||| || ||| Sbjct: 21617786 actcatgcgatgactgaaatgaatggtgcatattgctctacccggccaattcgtatagga 21617845 Query: 871 cctgcaactcctagaagaacttcaggt 897 |||||||| ||||||||| |||||||| Sbjct: 21617846 cctgcaacacctagaagatcttcaggt 21617872 Score = 186 bits (94), Expect = 2e-43 Identities = 145/162 (89%) Strand = Plus / Plus Query: 1177 cagtctaggggtgattctggccatcgacggaatggcatgtactatggcatgcctttctac 1236 ||||||||||||||||| ||||| || || |||||||||||||| || | ||||||||| Sbjct: 21621354 cagtctaggggtgattccggccaccggcgcaatggcatgtactacggtacacctttctac 21621413 Query: 1237 ggtggatatggctatgcgtcgccagttccacacccaaacgtgtatgctgcggcttatgga 1296 |||||||||||||||||||||||| |||||||||||||| ||||||| || || |||||| Sbjct: 21621414 ggtggatatggctatgcgtcgccacttccacacccaaacatgtatgcagcagcatatgga 21621473 Query: 1297 gcctaccctttctacggtaaccagcaactagtgagctgatga 1338 |||||||||| ||||||||||||||| || ||||| |||||| Sbjct: 21621474 gcctacccttactacggtaaccagcagcttgtgagttgatga 21621515 Score = 131 bits (66), Expect = 9e-27 Identities = 114/130 (87%) Strand = Plus / Plus Query: 953 tatatgttggcgggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaa 1012 ||||||||||||||||||| ||||| | || ||||||||||||||| ||| ||||||| | Sbjct: 21618308 tatatgttggcgggcttgatcccaacgctactgaagatgaactaaggaaagcatttgcta 21618367 Query: 1013 aatatggtgatgttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttcagt 1072 | ||||||||| |||| ||||| |||||||||||||| ||||| || ||||||||||| | Sbjct: 21618368 agtatggtgatcttgcctctgttaaaattcctgttggcaaacagtgtggttttgttcaat 21618427 Query: 1073 ttatcaacag 1082 || ||||||| Sbjct: 21618428 ttgtcaacag 21618437 Score = 125 bits (63), Expect = 5e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 1085 ctgatgcggaagaagcattacaagggttgagtggatcaacaattgggaagcaggctgttc 1144 ||||||| ||||||||| | |||||||||| ||||||||||||||| |||||||| || | Sbjct: 21618567 ctgatgcagaagaagcactgcaagggttgaatggatcaacaattggaaagcaggcagtgc 21618626 Query: 1145 gtctttcttggggccgcagtccagcaagcaaacag 1179 ||||||| ||||||||||||||||||||||||||| Sbjct: 21618627 gtctttcctggggccgcagtccagcaagcaaacag 21618661 Score = 115 bits (58), Expect = 5e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 355 gacgagaaccggacgatctgggtcggcgacctccagtactggatggacgagaactacctc 414 ||||||||||||||||| |||||||| || ||||||||||||||||||||| |||||| Sbjct: 21616069 gacgagaaccggacgatttgggtcggggatctccagtactggatggacgagggctacctg 21616128 Query: 415 cacagctgcttcggccccagcggcgaggtc 444 |||| |||||| |||||||||||||||||| Sbjct: 21616129 cacaactgctttggccccagcggcgaggtc 21616158 Score = 69.9 bits (35), Expect = 3e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 889 acttcaggtgattctggcacctctccaacaacacaatcagatggtgactcaactaacagg 948 |||||||||||||||||| |||| ||| ||| || |||||| ||||||||||||||||| Sbjct: 21618155 acttcaggtgattctggctcctcgccaccaaggcagtcagatagtgactcaactaacagg 21618214 Query: 949 acagtat 955 || |||| Sbjct: 21618215 acggtat 21618221 Score = 50.1 bits (25), Expect = 0.025 Identities = 56/65 (86%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1373 gaaaacaaggttttggtccagtaagaatactatcatgggatgacata-ctatagatggcc 1431 |||||| |||||||||||||||||| ||| || | || ||||| ||| ||||||||||| Sbjct: 21621543 gaaaacgaggttttggtccagtaagcatagtagcgtgtgatgagatatttatagatggcc 21621602 Query: 1432 ataaa 1436 ||||| Sbjct: 21621603 ataaa 21621607 Score = 46.1 bits (23), Expect = 0.39 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaaact 1574 |||||||||||||| |||||||||||| Sbjct: 21621723 aagaaattttgactcgctaataaaact 21621749
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 537 bits (271), Expect = e-149 Identities = 403/447 (90%) Strand = Plus / Plus Query: 451 attaaagttatccgcaatagacattctggagtttctgagggttatggttttgtagagttc 510 ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106376 attaaagttattcgtaatagacattctggagtttctgagggttatggttttgttgagttc 106435 Query: 511 tattcccatgcatcagcagagaaagcacttcagaatttcgctggtcatgtaatgcctaat 570 | ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 106436 ttttctcatgcatcagcagagaaagcactccagaatttttctggtcatgtaatgcctaat 106495 Query: 571 actgaccgagcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaa 630 || |||||||||||||||||||| |||||||||||||| | |||||||| ||| | ||| Sbjct: 106496 accgaccgagcttttaagttaaactgggcatcatatagcatgggagaaaagcgcgccgaa 106555 Query: 631 cttgcttctgatcactcaatttttgttggtgatctagctgttgatgttactgatgacatg 690 |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||| Sbjct: 106556 cttgcttctgatcactcaatatttgttggtgatctggctgttgatgttacggatgaaatg 106615 Query: 691 ttgatggaactttttgctaacaaatatcgttctgtgaaaggagctaaagttattattgat 750 |||||||| |||||||| || ||||| || |||||||||||||||||||||||||||||| Sbjct: 106616 ttgatggatctttttgccaaaaaataccgatctgtgaaaggagctaaagttattattgat 106675 Query: 751 gcaaacacgggccgttctaggggatatggatttgttaggtttggagatgatattgacaga 810 |||||||| || ||||||||||| || || |||||||||||||||||||||| |||| | Sbjct: 106676 gcaaacaccggacgttctaggggctacggctttgttaggtttggagatgataacgacaaa 106735 Query: 811 actcatgctatgactgaaatgaatggcatgtattgctctactcgaccaattcgcattgga 870 |||||||| ||||||||||||||||| ||||||||||| || |||||||| || ||| Sbjct: 106736 actcatgcgatgactgaaatgaatggtgcatattgctctacccggccaattcgtatagga 106795 Query: 871 cctgcaactcctagaagaacttcaggt 897 |||||||| ||||||||| |||||||| Sbjct: 106796 cctgcaacacctagaagatcttcaggt 106822 Score = 186 bits (94), Expect = 2e-43 Identities = 145/162 (89%) Strand = Plus / Plus Query: 1177 cagtctaggggtgattctggccatcgacggaatggcatgtactatggcatgcctttctac 1236 ||||||||||||||||| ||||| || || |||||||||||||| || | ||||||||| Sbjct: 110304 cagtctaggggtgattccggccaccggcgcaatggcatgtactacggtacacctttctac 110363 Query: 1237 ggtggatatggctatgcgtcgccagttccacacccaaacgtgtatgctgcggcttatgga 1296 |||||||||||||||||||||||| |||||||||||||| ||||||| || || |||||| Sbjct: 110364 ggtggatatggctatgcgtcgccacttccacacccaaacatgtatgcagcagcatatgga 110423 Query: 1297 gcctaccctttctacggtaaccagcaactagtgagctgatga 1338 |||||||||| ||||||||||||||| || ||||| |||||| Sbjct: 110424 gcctacccttactacggtaaccagcagcttgtgagttgatga 110465 Score = 131 bits (66), Expect = 9e-27 Identities = 114/130 (87%) Strand = Plus / Plus Query: 953 tatatgttggcgggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaa 1012 ||||||||||||||||||| ||||| | || ||||||||||||||| ||| ||||||| | Sbjct: 107258 tatatgttggcgggcttgatcccaacgctactgaagatgaactaaggaaagcatttgcta 107317 Query: 1013 aatatggtgatgttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttcagt 1072 | ||||||||| |||| ||||| |||||||||||||| ||||| || ||||||||||| | Sbjct: 107318 agtatggtgatcttgcctctgttaaaattcctgttggcaaacagtgtggttttgttcaat 107377 Query: 1073 ttatcaacag 1082 || ||||||| Sbjct: 107378 ttgtcaacag 107387 Score = 125 bits (63), Expect = 5e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 1085 ctgatgcggaagaagcattacaagggttgagtggatcaacaattgggaagcaggctgttc 1144 ||||||| ||||||||| | |||||||||| ||||||||||||||| |||||||| || | Sbjct: 107517 ctgatgcagaagaagcactgcaagggttgaatggatcaacaattggaaagcaggcagtgc 107576 Query: 1145 gtctttcttggggccgcagtccagcaagcaaacag 1179 ||||||| ||||||||||||||||||||||||||| Sbjct: 107577 gtctttcctggggccgcagtccagcaagcaaacag 107611 Score = 115 bits (58), Expect = 5e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 355 gacgagaaccggacgatctgggtcggcgacctccagtactggatggacgagaactacctc 414 ||||||||||||||||| |||||||| || ||||||||||||||||||||| |||||| Sbjct: 105019 gacgagaaccggacgatttgggtcggggatctccagtactggatggacgagggctacctg 105078 Query: 415 cacagctgcttcggccccagcggcgaggtc 444 |||| |||||| |||||||||||||||||| Sbjct: 105079 cacaactgctttggccccagcggcgaggtc 105108 Score = 69.9 bits (35), Expect = 3e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 889 acttcaggtgattctggcacctctccaacaacacaatcagatggtgactcaactaacagg 948 |||||||||||||||||| |||| ||| ||| || |||||| ||||||||||||||||| Sbjct: 107105 acttcaggtgattctggctcctcgccaccaaggcagtcagatagtgactcaactaacagg 107164 Query: 949 acagtat 955 || |||| Sbjct: 107165 acggtat 107171 Score = 50.1 bits (25), Expect = 0.025 Identities = 56/65 (86%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1373 gaaaacaaggttttggtccagtaagaatactatcatgggatgacata-ctatagatggcc 1431 |||||| |||||||||||||||||| ||| || | || ||||| ||| ||||||||||| Sbjct: 110493 gaaaacgaggttttggtccagtaagcatagtagcgtgtgatgagatatttatagatggcc 110552 Query: 1432 ataaa 1436 ||||| Sbjct: 110553 ataaa 110557 Score = 46.1 bits (23), Expect = 0.39 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaaact 1574 |||||||||||||| |||||||||||| Sbjct: 110673 aagaaattttgactcgctaataaaact 110699
>gb|AY104980.1| Zea mays PCO111857 mRNA sequence Length = 1651 Score = 513 bits (259), Expect = e-142 Identities = 786/961 (81%), Gaps = 3/961 (0%) Strand = Plus / Plus Query: 373 tgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggcccc 432 |||||||| |||||||||||||||||||| || |||||||| || | ||||||||| ||| Sbjct: 375 tgggtcggtgacctccagtactggatggatgaaaactacctacataactgcttcgggccc 434 Query: 433 agcggcgaggtcgtgacgattaaagttatccgcaatagacattctggagtttctgagggt 492 ||||||||||| || || || ||||||||||||||||| || | ||| || ||||| Sbjct: 435 agcggcgaggtggttacaataaaagttatccgcaataggcaaacaggacagtcagagggg 494 Query: 493 tatggttttgtagagttctattcccatgcatcagcagagaaagcacttcagaatttcgct 552 ||||| ||||| ||||||| ||| |||||||||||||||||||| ||||||||||| || Sbjct: 495 tatggatttgttgagttcttttctcatgcatcagcagagaaagctcttcagaattttact 554 Query: 553 ggtcatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcatatagtgtt 612 |||||||| ||||| || |||||||| | ||||| || || |||||||| ||||| | Sbjct: 555 ggtcatgtgatgccaaacactgaccggccatttaaattgaactgggcatcgtatagcatg 614 Query: 613 ggagaaaaacgctctgaacttgcttctgatcactcaatttttgttggtgatctagctgtt 672 || ||||| || |||||| | |||||||||||||| || |||||||| |||||||||| | Sbjct: 615 ggtgaaaagcgatctgaagtggcttctgatcactcgatatttgttggcgatctagctgct 674 Query: 673 gatgttactgatgacatgttgatggaactttttgctaacaaatatcgttctgtgaaagga 732 ||||| |||||||| ||| || |||| ||||| | | ||| || || || ||||||||| Sbjct: 675 gatgtcactgatgaaatgctgctggagcttttctccagcaagtaccgctcggtgaaagga 734 Query: 733 gctaaagttattattgatgcaaacacgggccgttctaggggatatggatttgttaggttt 792 |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 735 gctaaagttattattgatgcaaacacaggccgttccaggggctatggatttgtcaggttt 794 Query: 793 ggagatgatattgacagaactcatgctatgactgaaatgaatggcatgtattgctctact 852 ||||| || | |||| | ||||||| ||| ||||||||||||| | ||||||||||| Sbjct: 795 ggagacgacaacgacaaatctcatgccatgtctgaaatgaatggtgtatattgctctacg 854 Query: 853 cgaccaattcgcattggacctgcaactcctagaagaacttcaggtgattctggcacctct 912 | |||||||| || |||||||| ||||| |||||| ||||||||||||||||| |||| Sbjct: 855 aggccaattcgtataggacctgcgactcccagaagatcttcaggtgattctggctcctcg 914 Query: 913 ccaacaacacaatcagatggtgactcaactaacaggacagtatatgttggcgggcttgac 972 | | || ||||||||||| || ||||||| || ||||||||||| ||||||||| Sbjct: 915 actcctggtcattcagatggtgattcttctaacagaacggtatatgttggtgggcttgac 974 Query: 973 cccaatgttagtgaagatgaactaagaaaaacatttgcaaaatatggtgatgttgcttct 1032 |||||||| |||||||||||||| |||||| | ||||| ||||| |||| |||| ||| Sbjct: 975 cccaatgtcagtgaagatgaactgagaaaagcctttgccaaata---tgatcttgcctct 1031 Query: 1033 gtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacagagctgatgcg 1092 || ||||||||| | || || ||||| || |||||||| ||| | | |||| ||||||| Sbjct: 1032 gtgaaaattcctctaggaaagcaatgtggctttgttcaatttgttagcagaactgatgct 1091 Query: 1093 gaagaagcattacaagggttgagtggatcaacaattgggaagcaggctgttcgtctttct 1152 ||||||||| ||||||| || | ||||||| ||||| |||||||| ||||| ||||| Sbjct: 1092 gaagaagcactacaaggattaaatggatcactcattggaaagcaggcagttcgcctttca 1151 Query: 1153 tggggccgcagtccagcaagcaaacagtctaggggtgattctggccatcgacggaatggc 1212 |||| |||||| ||| | || |||||||||||||| || | | | | |||| | Sbjct: 1152 tgggtccgcagcccatcgcataagcagtctaggggtgactccgtcaacaggaggaacaac 1211 Query: 1213 atgtactatggcatgcctttctacggtggatatggctatgcgtcgccagttccacaccca 1272 ||||||||||||| || |||||||| |||||||||||||| || || || ||||||||| Sbjct: 1212 atgtactatggcacaccattctacggcggatatggctatgcctccccggtgccacaccca 1271 Query: 1273 aacgtgtatgctgcggcttatggagcctaccctttctacggtaaccagcaactagtgagc 1332 ||| |||| ||||| || ||||| | ||||| | || || |||||||| ||||||||| Sbjct: 1272 aacatgtacgctgcagcgtatggcacgtacccgctatatggcaaccagcagctagtgagc 1331 Query: 1333 t 1333 | Sbjct: 1332 t 1332 Score = 77.8 bits (39), Expect = 1e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 190 caccaccacatgccgcagccgcggtgggtggtacttccctacccgccgccgccgcctatg 249 |||||||||||||||||||| |||||||| || | || ||||||||||||||||| ||| Sbjct: 168 caccaccacatgccgcagccacggtgggtcgtcatcccgtacccgccgccgccgcccatg 227 Query: 250 gtggccacgcc 260 |||||| |||| Sbjct: 228 gtggccgcgcc 238
>gb|BT018995.1| Zea mays clone Contig483.F mRNA sequence Length = 1456 Score = 440 bits (222), Expect = e-120 Identities = 540/646 (83%) Strand = Plus / Plus Query: 373 tgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggcccc 432 |||||||| |||||||||||||||||||| || |||||||| || | ||||||||| ||| Sbjct: 166 tgggtcggtgacctccagtactggatggatgaaaactacctacataactgcttcgggccc 225 Query: 433 agcggcgaggtcgtgacgattaaagttatccgcaatagacattctggagtttctgagggt 492 ||||||||||| || || || ||||||||||||||||| || | ||| || ||||| Sbjct: 226 agcggcgaggtggttacaataaaagttatccgcaataggcaaacaggacagtcagagggg 285 Query: 493 tatggttttgtagagttctattcccatgcatcagcagagaaagcacttcagaatttcgct 552 ||||| ||||| ||||||| ||| |||||||||||||||||||| ||||||||||| || Sbjct: 286 tatggatttgttgagttcttttctcatgcatcagcagagaaagctcttcagaattttact 345 Query: 553 ggtcatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcatatagtgtt 612 |||||||| ||||| || |||||||| | ||||| || || |||||||| ||||| | Sbjct: 346 ggtcatgtgatgccaaacactgaccggccatttaaattgaactgggcatcgtatagcatg 405 Query: 613 ggagaaaaacgctctgaacttgcttctgatcactcaatttttgttggtgatctagctgtt 672 || ||||| || |||||| | |||||||||||||| || |||||||| |||||||||| | Sbjct: 406 ggtgaaaagcgatctgaagtggcttctgatcactcgatatttgttggcgatctagctgct 465 Query: 673 gatgttactgatgacatgttgatggaactttttgctaacaaatatcgttctgtgaaagga 732 ||||| |||||||| ||| || |||| ||||| | | ||| || || || ||||||||| Sbjct: 466 gatgtcactgatgaaatgctgctggagcttttctccagcaagtaccgctcggtgaaagga 525 Query: 733 gctaaagttattattgatgcaaacacgggccgttctaggggatatggatttgttaggttt 792 |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 526 gctaaagttattattgatgcaaacacaggccgttccaggggctatggatttgtcaggttt 585 Query: 793 ggagatgatattgacagaactcatgctatgactgaaatgaatggcatgtattgctctact 852 ||||| || | |||| | ||||||| ||| ||||||||||||| | ||||||||||| Sbjct: 586 ggagacgacaacgacaaatctcatgccatgtctgaaatgaatggtgtatattgctctacg 645 Query: 853 cgaccaattcgcattggacctgcaactcctagaagaacttcaggtgattctggcacctct 912 | |||||||| || |||||||| ||||| |||||| ||||||||||||||||| |||| Sbjct: 646 aggccaattcgtataggacctgcgactcccagaagatcttcaggtgattctggctcctcg 705 Query: 913 ccaacaacacaatcagatggtgactcaactaacaggacagtatatgttggcgggcttgac 972 | | || ||||||||||| || ||||||| || ||||||||||| ||||||||| Sbjct: 706 actcctggtcattcagatggtgattcttctaacagaacggtatatgttggtgggcttgac 765 Query: 973 cccaatgttagtgaagatgaactaagaaaaacatttgcaaaatatg 1018 |||||||| |||||||||||||| |||||| | ||||| ||||||| Sbjct: 766 cccaatgtcagtgaagatgaactgagaaaagcctttgccaaatatg 811
>emb|CR855170.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818E04, complete sequence Length = 146307 Score = 424 bits (214), Expect = e-115 Identities = 397/458 (86%) Strand = Plus / Plus Query: 440 aggtcgtgacgattaaagttatccgcaatagacattctggagtttctgagggttatggtt 499 |||| |||||||| |||||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 68155 aggtagtgacgataaaagttatccgcaatagacaaactggacaatccgagggatatggtt 68214 Query: 500 ttgtagagttctattcccatgcatcagcagagaaagcacttcagaatttcgctggtcatg 559 ||||||||||||| || || | ||| |||||||| || ||||||||||| ||||||||| Sbjct: 68215 ttgtagagttctactctcacggatcggcagagaaggctcttcagaattttactggtcatg 68274 Query: 560 taatgcctaatactgaccgagcttttaagttaaattgggcatcatatagtgttggagaaa 619 | |||||||| ||||| ||| |||| |||||||| ||||| |||||||| | || |||| Sbjct: 68275 tgatgcctaacactgatcgacctttcaagttaaactgggcttcatatagcatgggtgaaa 68334 Query: 620 aacgctctgaacttgcttctgatcactcaatttttgttggtgatctagctgttgatgtta 679 | || |||||| |||||||||| |||||||||| |||||||||||||||| |||||||| Sbjct: 68335 agcgatctgaagttgcttctgactactcaattttcgttggtgatctagctgctgatgtta 68394 Query: 680 ctgatgacatgttgatggaactttttgctaacaaatatcgttctgtgaaaggagctaaag 739 ||||||| ||||||||||| ||||||||||| || || || ||||||||||||||||||| Sbjct: 68395 ctgatgaaatgttgatggagctttttgctaataagtaccgctctgtgaaaggagctaaag 68454 Query: 740 ttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttggagatg 799 ||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||| Sbjct: 68455 ttattattgatgcaaacacaggccgttctaggggctatgggtttgttagatttggagatg 68514 Query: 800 atattgacagaactcatgctatgactgaaatgaatggcatgtattgctctactcgaccaa 859 | | ||||| | | ||||| ||||||||||||||||| ||||||||||||| | |||| Sbjct: 68515 acaatgacaaatcccatgcaatgactgaaatgaatggtgcgtattgctctactaggccaa 68574 Query: 860 ttcgcattggacctgcaactcctagaagaacttcaggt 897 |||| ||||||||||||||||| ||||| |||||||| Sbjct: 68575 ttcgtattggacctgcaactcccagaaggtcttcaggt 68612 Score = 139 bits (70), Expect = 4e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 334 ggatccggcgggaacggaggtgacgagaaccggacgatctgggtcggcgacctccagtac 393 ||||||||||||||||| | || |||||| |||||||||||| |||||||||||||| Sbjct: 67143 ggatccggcgggaacgggtgcgaggagaacaagacgatctgggttggcgacctccagtat 67202 Query: 394 tggatggacgagaactacctccacagctgcttcggccccagcggcgaggt 443 ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 67203 tggatggacgagaactacctccacagctgtttcggacccagcggcgaggt 67252 Score = 85.7 bits (43), Expect = 5e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 952 gtatatgttggcgggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgca 1011 ||||||||||| ||||| || || ||||| || |||||||| || || || ||||||| Sbjct: 69386 gtatatgttggtgggctcgatccaaatgtcagcgaagatgagctgaggaaggcatttgcc 69445 Query: 1012 aaatatggtgatgttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttca 1070 ||||||||||||||||| ||||| ||||||||| | ||||| ||||| || |||||||| Sbjct: 69446 aaatatggtgatgttgcctctgtaaaaattcctctagggaagcaatgtggctttgttca 69504 Score = 81.8 bits (41), Expect = 7e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 1213 atgtactatggcatgcctttctacggtggatatggctatgcgtcgccagttccacaccca 1272 ||||||||||| | ||| |||||||||||||| || ||||| || || || || ||||| Sbjct: 70991 atgtactatgggacgccattctacggtggatacggttatgcctcccccgtcccgcaccct 71050 Query: 1273 aacgtgtatgctgcggcttatggagcctaccctttctacggtaaccagcaactagtgagc 1332 ||| |||||||||| || ||||||||||||||| |||| || | ||||| ||||||||| Sbjct: 71051 aacatgtatgctgctgcatatggagcctaccctgtctatggcagtcagcagctagtgagc 71110 Query: 1333 t 1333 | Sbjct: 71111 t 71111 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 1085 ctgatgcggaagaagcattacaagggttgagtggatcaacaattgggaagcaggctgttc 1144 ||||||||||||||||| | ||||| |||| ||||||| ||||| |||||||| |||| Sbjct: 69607 ctgatgcggaagaagcactgcaaggattgaatggatcagtcattggaaagcaggcagttc 69666 Query: 1145 gtctttcttggggccgcag 1163 | ||||| ||||||||||| Sbjct: 69667 gcctttcatggggccgcag 69685 Score = 58.0 bits (29), Expect = 1e-04 Identities = 88/107 (82%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 178 cacccgcatcctcaccaccacatgccgcagccgcggtgggtggtacttccctacccgcc- 236 |||||||| || ||||||| |||| ||||| |||||||||| || || || |||||||| Sbjct: 66960 cacccgcacccgcaccaccccatggcgcaggcgcggtgggtcgtcctgccttacccgcct 67019 Query: 237 --gccgccgcctatggtggccacgccgccccctcctacgccgcagta 281 ||||||||| ||||||||| | ||||| || || |||||||||| Sbjct: 67020 ccgccgccgcccatggtggccgctccgccgcccccgccgccgcagta 67066 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaa 1571 |||||||||||||||||||||||| Sbjct: 71326 aagaaattttgacttgctaataaa 71349
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 424 bits (214), Expect = e-115 Identities = 397/458 (86%) Strand = Plus / Plus Query: 440 aggtcgtgacgattaaagttatccgcaatagacattctggagtttctgagggttatggtt 499 |||| |||||||| |||||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 22390526 aggtagtgacgataaaagttatccgcaatagacaaactggacaatccgagggatatggtt 22390585 Query: 500 ttgtagagttctattcccatgcatcagcagagaaagcacttcagaatttcgctggtcatg 559 ||||||||||||| || || | ||| |||||||| || ||||||||||| ||||||||| Sbjct: 22390586 ttgtagagttctactctcacggatcggcagagaaggctcttcagaattttactggtcatg 22390645 Query: 560 taatgcctaatactgaccgagcttttaagttaaattgggcatcatatagtgttggagaaa 619 | |||||||| ||||| ||| |||| |||||||| ||||| |||||||| | || |||| Sbjct: 22390646 tgatgcctaacactgatcgacctttcaagttaaactgggcttcatatagcatgggtgaaa 22390705 Query: 620 aacgctctgaacttgcttctgatcactcaatttttgttggtgatctagctgttgatgtta 679 | || |||||| |||||||||| |||||||||| |||||||||||||||| |||||||| Sbjct: 22390706 agcgatctgaagttgcttctgactactcaattttcgttggtgatctagctgctgatgtta 22390765 Query: 680 ctgatgacatgttgatggaactttttgctaacaaatatcgttctgtgaaaggagctaaag 739 ||||||| ||||||||||| ||||||||||| || || || ||||||||||||||||||| Sbjct: 22390766 ctgatgaaatgttgatggagctttttgctaataagtaccgctctgtgaaaggagctaaag 22390825 Query: 740 ttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttggagatg 799 ||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||| Sbjct: 22390826 ttattattgatgcaaacacaggccgttctaggggctatgggtttgttagatttggagatg 22390885 Query: 800 atattgacagaactcatgctatgactgaaatgaatggcatgtattgctctactcgaccaa 859 | | ||||| | | ||||| ||||||||||||||||| ||||||||||||| | |||| Sbjct: 22390886 acaatgacaaatcccatgcaatgactgaaatgaatggtgcgtattgctctactaggccaa 22390945 Query: 860 ttcgcattggacctgcaactcctagaagaacttcaggt 897 |||| ||||||||||||||||| ||||| |||||||| Sbjct: 22390946 ttcgtattggacctgcaactcccagaaggtcttcaggt 22390983 Score = 139 bits (70), Expect = 4e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 334 ggatccggcgggaacggaggtgacgagaaccggacgatctgggtcggcgacctccagtac 393 ||||||||||||||||| | || |||||| |||||||||||| |||||||||||||| Sbjct: 22389506 ggatccggcgggaacgggtgcgaggagaacaagacgatctgggttggcgacctccagtat 22389565 Query: 394 tggatggacgagaactacctccacagctgcttcggccccagcggcgaggt 443 ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 22389566 tggatggacgagaactacctccacagctgtttcggacccagcggcgaggt 22389615 Score = 85.7 bits (43), Expect = 5e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 952 gtatatgttggcgggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgca 1011 ||||||||||| ||||| || || ||||| || |||||||| || || || ||||||| Sbjct: 22391757 gtatatgttggtgggctcgatccaaatgtcagcgaagatgagctgaggaaggcatttgcc 22391816 Query: 1012 aaatatggtgatgttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttca 1070 ||||||||||||||||| ||||| ||||||||| | ||||| ||||| || |||||||| Sbjct: 22391817 aaatatggtgatgttgcctctgtaaaaattcctctagggaagcaatgtggctttgttca 22391875 Score = 81.8 bits (41), Expect = 7e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 1213 atgtactatggcatgcctttctacggtggatatggctatgcgtcgccagttccacaccca 1272 ||||||||||| | ||| |||||||||||||| || ||||| || || || || ||||| Sbjct: 22393362 atgtactatgggacgccattctacggtggatacggttatgcctcccccgtcccgcaccct 22393421 Query: 1273 aacgtgtatgctgcggcttatggagcctaccctttctacggtaaccagcaactagtgagc 1332 ||| |||||||||| || ||||||||||||||| |||| || | ||||| ||||||||| Sbjct: 22393422 aacatgtatgctgctgcatatggagcctaccctgtctatggcagtcagcagctagtgagc 22393481 Query: 1333 t 1333 | Sbjct: 22393482 t 22393482 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 1085 ctgatgcggaagaagcattacaagggttgagtggatcaacaattgggaagcaggctgttc 1144 ||||||||||||||||| | ||||| |||| ||||||| ||||| |||||||| |||| Sbjct: 22391978 ctgatgcggaagaagcactgcaaggattgaatggatcagtcattggaaagcaggcagttc 22392037 Query: 1145 gtctttcttggggccgcag 1163 | ||||| ||||||||||| Sbjct: 22392038 gcctttcatggggccgcag 22392056 Score = 60.0 bits (30), Expect = 3e-05 Identities = 89/108 (82%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 177 gcacccgcatcctcaccaccacatgccgcagccgcggtgggtggtacttccctacccgcc 236 ||||||||| || ||||||| |||| ||||| |||||||||| || || || |||||||| Sbjct: 22389322 gcacccgcacccgcaccaccccatggcgcaggcgcggtgggtcgtcctgccttacccgcc 22389381 Query: 237 ---gccgccgcctatggtggccacgccgccccctcctacgccgcagta 281 ||||||||| ||||||||| | ||||| || || |||||||||| Sbjct: 22389382 tccgccgccgcccatggtggccgctccgccgcccccgccgccgcagta 22389429 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 366 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 425 |||| ||||| |||||||||| ||| |||||||||||||| |||| || ||| |||||| Sbjct: 31853713 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 31853772 Query: 426 cg 427 || Sbjct: 31853773 cg 31853774 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaa 1571 |||||||||||||||||||||||| Sbjct: 22393699 aagaaattttgacttgctaataaa 22393722
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 424 bits (214), Expect = e-115 Identities = 397/458 (86%) Strand = Plus / Plus Query: 440 aggtcgtgacgattaaagttatccgcaatagacattctggagtttctgagggttatggtt 499 |||| |||||||| |||||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 141432 aggtagtgacgataaaagttatccgcaatagacaaactggacaatccgagggatatggtt 141491 Query: 500 ttgtagagttctattcccatgcatcagcagagaaagcacttcagaatttcgctggtcatg 559 ||||||||||||| || || | ||| |||||||| || ||||||||||| ||||||||| Sbjct: 141492 ttgtagagttctactctcacggatcggcagagaaggctcttcagaattttactggtcatg 141551 Query: 560 taatgcctaatactgaccgagcttttaagttaaattgggcatcatatagtgttggagaaa 619 | |||||||| ||||| ||| |||| |||||||| ||||| |||||||| | || |||| Sbjct: 141552 tgatgcctaacactgatcgacctttcaagttaaactgggcttcatatagcatgggtgaaa 141611 Query: 620 aacgctctgaacttgcttctgatcactcaatttttgttggtgatctagctgttgatgtta 679 | || |||||| |||||||||| |||||||||| |||||||||||||||| |||||||| Sbjct: 141612 agcgatctgaagttgcttctgactactcaattttcgttggtgatctagctgctgatgtta 141671 Query: 680 ctgatgacatgttgatggaactttttgctaacaaatatcgttctgtgaaaggagctaaag 739 ||||||| ||||||||||| ||||||||||| || || || ||||||||||||||||||| Sbjct: 141672 ctgatgaaatgttgatggagctttttgctaataagtaccgctctgtgaaaggagctaaag 141731 Query: 740 ttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttggagatg 799 ||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||| Sbjct: 141732 ttattattgatgcaaacacaggccgttctaggggctatgggtttgttagatttggagatg 141791 Query: 800 atattgacagaactcatgctatgactgaaatgaatggcatgtattgctctactcgaccaa 859 | | ||||| | | ||||| ||||||||||||||||| ||||||||||||| | |||| Sbjct: 141792 acaatgacaaatcccatgcaatgactgaaatgaatggtgcgtattgctctactaggccaa 141851 Query: 860 ttcgcattggacctgcaactcctagaagaacttcaggt 897 |||| ||||||||||||||||| ||||| |||||||| Sbjct: 141852 ttcgtattggacctgcaactcccagaaggtcttcaggt 141889 Score = 139 bits (70), Expect = 4e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 334 ggatccggcgggaacggaggtgacgagaaccggacgatctgggtcggcgacctccagtac 393 ||||||||||||||||| | || |||||| |||||||||||| |||||||||||||| Sbjct: 140412 ggatccggcgggaacgggtgcgaggagaacaagacgatctgggttggcgacctccagtat 140471 Query: 394 tggatggacgagaactacctccacagctgcttcggccccagcggcgaggt 443 ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 140472 tggatggacgagaactacctccacagctgtttcggacccagcggcgaggt 140521 Score = 85.7 bits (43), Expect = 5e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 952 gtatatgttggcgggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgca 1011 ||||||||||| ||||| || || ||||| || |||||||| || || || ||||||| Sbjct: 142663 gtatatgttggtgggctcgatccaaatgtcagcgaagatgagctgaggaaggcatttgcc 142722 Query: 1012 aaatatggtgatgttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttca 1070 ||||||||||||||||| ||||| ||||||||| | ||||| ||||| || |||||||| Sbjct: 142723 aaatatggtgatgttgcctctgtaaaaattcctctagggaagcaatgtggctttgttca 142781 Score = 81.8 bits (41), Expect = 7e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 1213 atgtactatggcatgcctttctacggtggatatggctatgcgtcgccagttccacaccca 1272 ||||||||||| | ||| |||||||||||||| || ||||| || || || || ||||| Sbjct: 144268 atgtactatgggacgccattctacggtggatacggttatgcctcccccgtcccgcaccct 144327 Query: 1273 aacgtgtatgctgcggcttatggagcctaccctttctacggtaaccagcaactagtgagc 1332 ||| |||||||||| || ||||||||||||||| |||| || | ||||| ||||||||| Sbjct: 144328 aacatgtatgctgctgcatatggagcctaccctgtctatggcagtcagcagctagtgagc 144387 Query: 1333 t 1333 | Sbjct: 144388 t 144388 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 1085 ctgatgcggaagaagcattacaagggttgagtggatcaacaattgggaagcaggctgttc 1144 ||||||||||||||||| | ||||| |||| ||||||| ||||| |||||||| |||| Sbjct: 142884 ctgatgcggaagaagcactgcaaggattgaatggatcagtcattggaaagcaggcagttc 142943 Query: 1145 gtctttcttggggccgcag 1163 | ||||| ||||||||||| Sbjct: 142944 gcctttcatggggccgcag 142962 Score = 60.0 bits (30), Expect = 3e-05 Identities = 89/108 (82%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 177 gcacccgcatcctcaccaccacatgccgcagccgcggtgggtggtacttccctacccgcc 236 ||||||||| || ||||||| |||| ||||| |||||||||| || || || |||||||| Sbjct: 140228 gcacccgcacccgcaccaccccatggcgcaggcgcggtgggtcgtcctgccttacccgcc 140287 Query: 237 ---gccgccgcctatggtggccacgccgccccctcctacgccgcagta 281 ||||||||| ||||||||| | ||||| || || |||||||||| Sbjct: 140288 tccgccgccgcccatggtggccgctccgccgcccccgccgccgcagta 140335 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaa 1571 |||||||||||||||||||||||| Sbjct: 144605 aagaaattttgacttgctaataaa 144628
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 186 bits (94), Expect = 2e-43 Identities = 145/162 (89%) Strand = Plus / Plus Query: 1177 cagtctaggggtgattctggccatcgacggaatggcatgtactatggcatgcctttctac 1236 ||||||||||||||||| ||||| || || |||||||||||||| || | ||||||||| Sbjct: 2751 cagtctaggggtgattccggccaccggcgcaatggcatgtactacggtacacctttctac 2810 Query: 1237 ggtggatatggctatgcgtcgccagttccacacccaaacgtgtatgctgcggcttatgga 1296 |||||||||||||||||||||||| |||||||||||||| ||||||| || || |||||| Sbjct: 2811 ggtggatatggctatgcgtcgccacttccacacccaaacatgtatgcagcagcatatgga 2870 Query: 1297 gcctaccctttctacggtaaccagcaactagtgagctgatga 1338 |||||||||| ||||||||||||||| || ||||| |||||| Sbjct: 2871 gcctacccttactacggtaaccagcagcttgtgagttgatga 2912 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 1122 aacaattgggaagcaggctgttcgtctttcttggggccgcagtccagcaagcaaacag 1179 ||||||||| |||||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 1 aacaattggaaagcaggcagtgcgtctttcctggggccgcagtccagcaagcaaacag 58 Score = 50.1 bits (25), Expect = 0.025 Identities = 56/65 (86%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1373 gaaaacaaggttttggtccagtaagaatactatcatgggatgacata-ctatagatggcc 1431 |||||| |||||||||||||||||| ||| || | || ||||| ||| ||||||||||| Sbjct: 2940 gaaaacgaggttttggtccagtaagcatagtagcgtgtgatgagatatttatagatggcc 2999 Query: 1432 ataaa 1436 ||||| Sbjct: 3000 ataaa 3004 Score = 46.1 bits (23), Expect = 0.39 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaaact 1574 |||||||||||||| |||||||||||| Sbjct: 3120 aagaaattttgactcgctaataaaact 3146
>gb|AY110611.1| Zea mays CL773_-1 mRNA sequence Length = 1771 Score = 129 bits (65), Expect = 3e-26 Identities = 89/97 (91%) Strand = Plus / Plus Query: 371 tctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggcc 430 ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 448 tctgggtcggcgacctccattactggatggacgagaactacctacacagctgcttcggct 507 Query: 431 ccagcggcgaggtcgtgacgattaaagttatccgcaa 467 || ||||||||| ||| |||| |||||||||||||| Sbjct: 508 acaccggcgaggttgtggcgatcaaagttatccgcaa 544
>ref|NM_001069938.1| Oryza sativa (japonica cultivar-group) Os09g0462700 (Os09g0462700) mRNA, partial cds Length = 1614 Score = 127 bits (64), Expect = 1e-25 Identities = 195/236 (82%), Gaps = 2/236 (0%) Strand = Plus / Plus Query: 370 atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 429 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 350 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 409 Query: 430 cccagcggcgaggtcgtgacgattaaagttatccgcaatagacattctggagtttctgag 489 || ||||||||| || | || || ||||| || |||| || ||||| || ||| Sbjct: 410 tacaccggcgaggttgtagcaataaaggttattcgtaataagcaaactggacaatcggag 469 Query: 490 ggttatggttttgtagagttctattcccatgcatcagcagagaaagcactt-cagaattt 548 |||||||| |||||||||||||| ||||| | || ||||||| |||| || |||| Sbjct: 470 ggttatggatttgtagagttctacagtcatgctgctgctgagaaagtacttgaaggattt 529 Query: 549 cgctggtcatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 604 ||||||||| ||||||| || ||||||| | |||||| | ||||||||||||||| Sbjct: 530 -gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 584 Score = 65.9 bits (33), Expect = 4e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 721 tctgtgaaaggagctaaagttattattgatgcaaacacgggccgttctaggggatatgga 780 ||||| ||||| || |||||| |||||||||| || || || | || | ||| ||||| Sbjct: 701 tctgtcaaaggtgcgaaagttgttattgatgctaatactggtagatcaaagggctatggt 760 Query: 781 tttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaatggcatg 840 ||||| || ||||||||||||| || | || ||||| |||||||| |||||||| || Sbjct: 761 tttgtgagatttggagatgataacgagaagacacatgccatgactgagatgaatggtgtg 820 Query: 841 tattgctctactcgaccaattcgcattggacctgcaactcctagaagaacttcaggt 897 ||||||||||| | ||||| | ||||| ||||||||||| |||| ||| |||||| Sbjct: 821 tattgctctaccaggccaatgagaattggccctgcaactcccagaaaaacctcaggt 877 Score = 46.1 bits (23), Expect = 0.39 Identities = 89/111 (80%) Strand = Plus / Plus Query: 964 gggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaaaatatggtgat 1023 |||||||| || ||||||||||||||||| || || |||||||| | |||| ||||| Sbjct: 947 gggcttgatccaaatgttagtgaagatgaccttaggcaaacattttcgcaatacggtgaa 1006 Query: 1024 gttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttcagttt 1074 || | || || || || || ||||||||||| ||||| ||||| |||||| Sbjct: 1007 atttcatcggtaaagatcccagttgggaaacagtgcggctttgtgcagttt 1057
>dbj|AK067260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096N13, full insert sequence Length = 1615 Score = 127 bits (64), Expect = 1e-25 Identities = 195/236 (82%), Gaps = 2/236 (0%) Strand = Plus / Plus Query: 370 atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 429 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 351 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 410 Query: 430 cccagcggcgaggtcgtgacgattaaagttatccgcaatagacattctggagtttctgag 489 || ||||||||| || | || || ||||| || |||| || ||||| || ||| Sbjct: 411 tacaccggcgaggttgtagcaataaaggttattcgtaataagcaaactggacaatcggag 470 Query: 490 ggttatggttttgtagagttctattcccatgcatcagcagagaaagcactt-cagaattt 548 |||||||| |||||||||||||| ||||| | || ||||||| |||| || |||| Sbjct: 471 ggttatggatttgtagagttctacagtcatgctgctgctgagaaagtacttgaaggattt 530 Query: 549 cgctggtcatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 604 ||||||||| ||||||| || ||||||| | |||||| | ||||||||||||||| Sbjct: 531 -gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 585 Score = 65.9 bits (33), Expect = 4e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 721 tctgtgaaaggagctaaagttattattgatgcaaacacgggccgttctaggggatatgga 780 ||||| ||||| || |||||| |||||||||| || || || | || | ||| ||||| Sbjct: 702 tctgtcaaaggtgcgaaagttgttattgatgctaatactggtagatcaaagggctatggt 761 Query: 781 tttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaatggcatg 840 ||||| || ||||||||||||| || | || ||||| |||||||| |||||||| || Sbjct: 762 tttgtgagatttggagatgataacgagaagacacatgccatgactgagatgaatggtgtg 821 Query: 841 tattgctctactcgaccaattcgcattggacctgcaactcctagaagaacttcaggt 897 ||||||||||| | ||||| | ||||| ||||||||||| |||| ||| |||||| Sbjct: 822 tattgctctaccaggccaatgagaattggccctgcaactcccagaaaaacctcaggt 878 Score = 46.1 bits (23), Expect = 0.39 Identities = 89/111 (80%) Strand = Plus / Plus Query: 964 gggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaaaatatggtgat 1023 |||||||| || ||||||||||||||||| || || |||||||| | |||| ||||| Sbjct: 948 gggcttgatccaaatgttagtgaagatgaccttaggcaaacattttcgcaatacggtgaa 1007 Query: 1024 gttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttcagttt 1074 || | || || || || || ||||||||||| ||||| ||||| |||||| Sbjct: 1008 atttcatcggtaaagatcccagttgggaaacagtgcggctttgtgcagttt 1058
>dbj|AK060597.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G08, full insert sequence Length = 1356 Score = 127 bits (64), Expect = 1e-25 Identities = 195/236 (82%), Gaps = 2/236 (0%) Strand = Plus / Plus Query: 370 atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 429 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 95 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 154 Query: 430 cccagcggcgaggtcgtgacgattaaagttatccgcaatagacattctggagtttctgag 489 || ||||||||| || | || || ||||| || |||| || ||||| || ||| Sbjct: 155 tacaccggcgaggttgtagcaataaaggttattcgtaataagcaaactggacaatcggag 214 Query: 490 ggttatggttttgtagagttctattcccatgcatcagcagagaaagcactt-cagaattt 548 |||||||| |||||||||||||| ||||| | || ||||||| |||| || |||| Sbjct: 215 ggttatggatttgtagagttctacagtcatgctgctgctgagaaagtacttgaaggattt 274 Query: 549 cgctggtcatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 604 ||||||||| ||||||| || ||||||| | |||||| | ||||||||||||||| Sbjct: 275 -gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 329 Score = 65.9 bits (33), Expect = 4e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 721 tctgtgaaaggagctaaagttattattgatgcaaacacgggccgttctaggggatatgga 780 ||||| ||||| || |||||| |||||||||| || || || | || | ||| ||||| Sbjct: 446 tctgtcaaaggtgcgaaagttgttattgatgctaatactggtagatcaaagggctatggt 505 Query: 781 tttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaatggcatg 840 ||||| || ||||||||||||| || | || ||||| |||||||| |||||||| || Sbjct: 506 tttgtgagatttggagatgataacgagaagacacatgccatgactgagatgaatggtgtg 565 Query: 841 tattgctctactcgaccaattcgcattggacctgcaactcctagaagaacttcaggt 897 ||||||||||| | ||||| | ||||| ||||||||||| |||| ||| |||||| Sbjct: 566 tattgctctaccaggccaatgagaattggccctgcaactcccagaaaaacctcaggt 622 Score = 46.1 bits (23), Expect = 0.39 Identities = 89/111 (80%) Strand = Plus / Plus Query: 964 gggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaaaatatggtgat 1023 |||||||| || ||||||||||||||||| || || |||||||| | |||| ||||| Sbjct: 692 gggcttgatccaaatgttagtgaagatgaccttaggcaaacattttcgcaatacggtgaa 751 Query: 1024 gttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttcagttt 1074 || | || || || || || ||||||||||| ||||| ||||| |||||| Sbjct: 752 atttcatcggtaaagatcccagttgggaaacagtgcggctttgtgcagttt 802
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 115 bits (58), Expect = 5e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 370 atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 429 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 17444594 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 17444653 Query: 430 cccagcggcgaggt 443 || ||||||||| Sbjct: 17444654 tacaccggcgaggt 17444667 Score = 65.9 bits (33), Expect = 4e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 721 tctgtgaaaggagctaaagttattattgatgcaaacacgggccgttctaggggatatgga 780 ||||| ||||| || |||||| |||||||||| || || || | || | ||| ||||| Sbjct: 17446253 tctgtcaaaggtgcgaaagttgttattgatgctaatactggtagatcaaagggctatggt 17446312 Query: 781 tttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaatggcatg 840 ||||| || ||||||||||||| || | || ||||| |||||||| |||||||| || Sbjct: 17446313 tttgtgagatttggagatgataacgagaagacacatgccatgactgagatgaatggtgtg 17446372 Query: 841 tattgctctactcgaccaattcgcattggacctgcaactcctagaagaacttcaggt 897 ||||||||||| | ||||| | ||||| ||||||||||| |||| ||| |||||| Sbjct: 17446373 tattgctctaccaggccaatgagaattggccctgcaactcccagaaaaacctcaggt 17446429 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 550 gctggtcatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 604 ||||||||| ||||||| || ||||||| | |||||| | ||||||||||||||| Sbjct: 17446082 gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 17446136 Score = 46.1 bits (23), Expect = 0.39 Identities = 89/111 (80%) Strand = Plus / Plus Query: 964 gggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaaaatatggtgat 1023 |||||||| || ||||||||||||||||| || || |||||||| | |||| ||||| Sbjct: 17447519 gggcttgatccaaatgttagtgaagatgaccttaggcaaacattttcgcaatacggtgaa 17447578 Query: 1024 gttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttcagttt 1074 || | || || || || || ||||||||||| ||||| ||||| |||||| Sbjct: 17447579 atttcatcggtaaagatcccagttgggaaacagtgcggctttgtgcagttt 17447629
>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0019B14 Length = 127570 Score = 115 bits (58), Expect = 5e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 370 atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 429 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 8772 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 8831 Query: 430 cccagcggcgaggt 443 || ||||||||| Sbjct: 8832 tacaccggcgaggt 8845 Score = 65.9 bits (33), Expect = 4e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 721 tctgtgaaaggagctaaagttattattgatgcaaacacgggccgttctaggggatatgga 780 ||||| ||||| || |||||| |||||||||| || || || | || | ||| ||||| Sbjct: 10431 tctgtcaaaggtgcgaaagttgttattgatgctaatactggtagatcaaagggctatggt 10490 Query: 781 tttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaatggcatg 840 ||||| || ||||||||||||| || | || ||||| |||||||| |||||||| || Sbjct: 10491 tttgtgagatttggagatgataacgagaagacacatgccatgactgagatgaatggtgtg 10550 Query: 841 tattgctctactcgaccaattcgcattggacctgcaactcctagaagaacttcaggt 897 ||||||||||| | ||||| | ||||| ||||||||||| |||| ||| |||||| Sbjct: 10551 tattgctctaccaggccaatgagaattggccctgcaactcccagaaaaacctcaggt 10607 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 550 gctggtcatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 604 ||||||||| ||||||| || ||||||| | |||||| | ||||||||||||||| Sbjct: 10260 gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 10314 Score = 46.1 bits (23), Expect = 0.39 Identities = 89/111 (80%) Strand = Plus / Plus Query: 964 gggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaaaatatggtgat 1023 |||||||| || ||||||||||||||||| || || |||||||| | |||| ||||| Sbjct: 11697 gggcttgatccaaatgttagtgaagatgaccttaggcaaacattttcgcaatacggtgaa 11756 Query: 1024 gttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttcagttt 1074 || | || || || || || ||||||||||| ||||| ||||| |||||| Sbjct: 11757 atttcatcggtaaagatcccagttgggaaacagtgcggctttgtgcagttt 11807
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 115 bits (58), Expect = 5e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 370 atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 429 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 168507 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 168566 Query: 430 cccagcggcgaggt 443 || ||||||||| Sbjct: 168567 tacaccggcgaggt 168580 Score = 65.9 bits (33), Expect = 4e-07 Identities = 141/177 (79%) Strand = Plus / Plus Query: 721 tctgtgaaaggagctaaagttattattgatgcaaacacgggccgttctaggggatatgga 780 ||||| ||||| || |||||| |||||||||| || || || | || | ||| ||||| Sbjct: 170166 tctgtcaaaggtgcgaaagttgttattgatgctaatactggtagatcaaagggctatggt 170225 Query: 781 tttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaatggcatg 840 ||||| || ||||||||||||| || | || ||||| |||||||| |||||||| || Sbjct: 170226 tttgtgagatttggagatgataacgagaagacacatgccatgactgagatgaatggtgtg 170285 Query: 841 tattgctctactcgaccaattcgcattggacctgcaactcctagaagaacttcaggt 897 ||||||||||| | ||||| | ||||| ||||||||||| |||| ||| |||||| Sbjct: 170286 tattgctctaccaggccaatgagaattggccctgcaactcccagaaaaacctcaggt 170342 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 550 gctggtcatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 604 ||||||||| ||||||| || ||||||| | |||||| | ||||||||||||||| Sbjct: 169995 gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 170049 Score = 46.1 bits (23), Expect = 0.39 Identities = 89/111 (80%) Strand = Plus / Plus Query: 964 gggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaaaatatggtgat 1023 |||||||| || ||||||||||||||||| || || |||||||| | |||| ||||| Sbjct: 171432 gggcttgatccaaatgttagtgaagatgaccttaggcaaacattttcgcaatacggtgaa 171491 Query: 1024 gttgcttctgtcaaaattcctgttgggaaacaatgcggttttgttcagttt 1074 || | || || || || || ||||||||||| ||||| ||||| |||||| Sbjct: 171492 atttcatcggtaaagatcccagttgggaaacagtgcggctttgtgcagttt 171542
>emb|AJ344538.1|NTA344538 Nicotiana tabacum mRNA for nucleic acid binding protein (nbp1 gene) Length = 1623 Score = 83.8 bits (42), Expect = 2e-12 Identities = 111/134 (82%) Strand = Plus / Plus Query: 712 aaatatcgttctgtgaaaggagctaaagttattattgatgcaaacacgggccgttctagg 771 ||||||| |||||| |||| ||||||||| | ||||||| ||||| || || || | Sbjct: 714 aaatatccttctgttaaagctgctaaagttgtctttgatgccaacactggtcgctcaaaa 773 Query: 772 ggatatggatttgttaggtttggagatgatattgacagaactcatgctatgactgaaatg 831 |||||||| ||||| |||||||||||||||| ||| || |||| ||||||||||||||| Sbjct: 774 ggatatggctttgtaaggtttggagatgataatgagaggtctcaagctatgactgaaatg 833 Query: 832 aatggcatgtattg 845 ||||| ||||||| Sbjct: 834 aatggtgtgtattg 847 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 358 gagaaccggacgatctgggtcggcgacct 386 |||||||| |||||||||||||| ||||| Sbjct: 360 gagaaccgaacgatctgggtcggtgacct 388
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 77.8 bits (39), Expect = 1e-10 Identities = 69/79 (87%) Strand = Plus / Plus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 424 ||||| ||||| |||||||||||||||||||| ||||||||||||||| ||| ||||| Sbjct: 3952141 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 3952200 Query: 425 tcggccccagcggcgaggt 443 ||| || || ||||||||| Sbjct: 3952201 tcgcccacaccggcgaggt 3952219 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 377 tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 426 ||||||||||||||| ||||||||| ||||||||||| ||| ||||||| Sbjct: 20461319 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 20461270 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 775 tatggatttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaat 834 ||||||||||| | ||||| |||||| | ||| | | || ||| ||||| ||||||||| Sbjct: 3953464 tatggatttgtaaagtttgcagatgaaaatgaaaagaatcgtgcaatgacagaaatgaat 3953523 Query: 835 ggcatgtattgctc 848 || ||||||||||| Sbjct: 3953524 ggtatgtattgctc 3953537
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 77.8 bits (39), Expect = 1e-10 Identities = 69/79 (87%) Strand = Plus / Minus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 424 ||||| ||||| |||||||||||||||||||| ||||||||||||||| ||| ||||| Sbjct: 147338 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 147279 Query: 425 tcggccccagcggcgaggt 443 ||| || || ||||||||| Sbjct: 147278 tcgcccacaccggcgaggt 147260 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Minus Query: 775 tatggatttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaat 834 ||||||||||| | ||||| |||||| | ||| | | || ||| ||||| ||||||||| Sbjct: 146015 tatggatttgtaaagtttgcagatgaaaatgaaaagaatcgtgcaatgacagaaatgaat 145956 Query: 835 ggcatgtattgctc 848 || ||||||||||| Sbjct: 145955 ggtatgtattgctc 145942
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 77.8 bits (39), Expect = 1e-10 Identities = 69/79 (87%) Strand = Plus / Plus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 424 ||||| ||||| |||||||||||||||||||| ||||||||||||||| ||| ||||| Sbjct: 158503 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 158562 Query: 425 tcggccccagcggcgaggt 443 ||| || || ||||||||| Sbjct: 158563 tcgcccacaccggcgaggt 158581 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 775 tatggatttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaat 834 ||||||||||| | ||||| |||||| | ||| | | || ||| ||||| ||||||||| Sbjct: 159826 tatggatttgtaaagtttgcagatgaaaatgaaaagaatcgtgcaatgacagaaatgaat 159885 Query: 835 ggcatgtattgctc 848 || ||||||||||| Sbjct: 159886 ggtatgtattgctc 159899
>gb|AY109704.1| Zea mays CL776_1 mRNA sequence Length = 1722 Score = 77.8 bits (39), Expect = 1e-10 Identities = 48/51 (94%) Strand = Plus / Plus Query: 377 tcggcgacctccagtactggatggacgagaactacctccacagctgcttcg 427 ||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 238 tcggcgacctccagtactggaccgacgagaactacctctacagctgcttcg 288
>ref|NM_001055659.1| Oryza sativa (japonica cultivar-group) Os03g0174100 (Os03g0174100) mRNA, partial cds Length = 1569 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 424 ||||| ||||| |||||||||||||||||||| ||||||||||||||| ||| ||||| Sbjct: 114 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 173 Query: 425 tcggccccagcggcgag 441 ||| || || ||||||| Sbjct: 174 tcgcccacaccggcgag 190 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 775 tatggatttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaat 834 ||||||||||| | ||||| |||||| | ||| | | || ||| ||||| ||||||||| Sbjct: 524 tatggatttgtaaagtttgcagatgaaaatgaaaagaatcgtgcaatgacagaaatgaat 583 Query: 835 ggcatgtattgctc 848 || ||||||||||| Sbjct: 584 ggtatgtattgctc 597
>dbj|AK104916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E08, full insert sequence Length = 1569 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 424 ||||| ||||| |||||||||||||||||||| ||||||||||||||| ||| ||||| Sbjct: 114 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 173 Query: 425 tcggccccagcggcgag 441 ||| || || ||||||| Sbjct: 174 tcgcccacaccggcgag 190 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 775 tatggatttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaat 834 ||||||||||| | ||||| |||||| | ||| | | || ||| ||||| ||||||||| Sbjct: 524 tatggatttgtaaagtttgcagatgaaaatgaaaagaatcgtgcaatgacagaaatgaat 583 Query: 835 ggcatgtattgctc 848 || ||||||||||| Sbjct: 584 ggtatgtattgctc 597
>dbj|AK065337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M06, full insert sequence Length = 1559 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 424 ||||| ||||| |||||||||||||||||||| ||||||||||||||| ||| ||||| Sbjct: 140 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 199 Query: 425 tcggccccagcggcgag 441 ||| || || ||||||| Sbjct: 200 tcgcccacaccggcgag 216 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 775 tatggatttgttaggtttggagatgatattgacagaactcatgctatgactgaaatgaat 834 ||||||||||| | ||||| |||||| | ||| | | || ||| ||||| ||||||||| Sbjct: 550 tatggatttgtaaagtttgcagatgaaaatgaaaagaatcgtgcaatgacagaaatgaat 609 Query: 835 ggcatgtattgctc 848 || ||||||||||| Sbjct: 610 ggtatgtattgctc 623
>gb|BT012902.1| Lycopersicon esculentum clone 114011F, mRNA sequence Length = 1635 Score = 65.9 bits (33), Expect = 4e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 745 attgatgcaaacacgggccgttctaggggatatggatttgttaggtttggagatgatatt 804 |||||||| ||||| || ||||||| |||||||| ||||| |||||||||||||||| | Sbjct: 741 attgatgccaacactggtcgttctaaaggatatggttttgtaaggtttggagatgataat 800 Query: 805 gacagaactcatgctatgactgaaatgaatggcatgtattg 845 || || || ||||||| |||||||||||| ||||||| Sbjct: 801 gagaggtcttcagctatgaatgaaatgaatggtgtgtattg 841 Score = 42.1 bits (21), Expect = 6.2 Identities = 78/97 (80%) Strand = Plus / Plus Query: 957 tgttggcgggcttgaccccaatgttagtgaagatgaactaagaaaaacatttgcaaaata 1016 |||||| || |||||||||||||| ||||| || || || ||| | | |||||| | || Sbjct: 989 tgttggaggtcttgaccccaatgtcagtgatgaagatcttagacagccttttgcacagta 1048 Query: 1017 tggtgatgttgcttctgtcaaaattcctgttgggaaa 1053 |||||| | | |||||| |||||||| ||||||||| Sbjct: 1049 tggtgaaatagtttctgtaaaaattccagttgggaaa 1085
>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence Length = 36906 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 366 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 425 |||| ||||||| ||||| ||||||||||||||||||||| ||||||| | |||||||| Sbjct: 7110 gacgctctgggtgggcgatctccagtactggatggacgagggctacctctatagctgctt 7169
>gb|AY107267.1| Zea mays PCO073795 mRNA sequence Length = 1599 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 371 tctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttc 426 ||||| |||| ||||| |||||||||||||| |||||||||||| | ||||||||| Sbjct: 351 tctggatcggggacctgcagtactggatggatgagaactacctctatagctgcttc 406
>dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13P22, TM0079c, complete sequence Length = 109022 Score = 61.9 bits (31), Expect = 7e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 1126 attgggaagcaggctgttcgtctttcttggggccgcagtccag 1168 |||||||||||| | || ||||||||||||||||||||||||| Sbjct: 7094 attgggaagcagacagtgcgtctttcttggggccgcagtccag 7052
>dbj|AP004625.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT14E05b, TM0089b, complete sequence Length = 126514 Score = 61.9 bits (31), Expect = 7e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1121 caacaattgggaagcaggctgttcgtctttcttggggccgcagtccagcaa 1171 |||||||||| ||||| | |||||||||||||||||||||| |||||||| Sbjct: 61146 caacaattggaaagcaaacagttcgtctttcttggggccgcaatccagcaa 61096 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 487 gagggttatggttttgtagagttctattc 515 ||||||||||| ||||| ||||||||||| Sbjct: 62577 gagggttatggatttgtggagttctattc 62549
>ref|NM_001057051.1| Oryza sativa (japonica cultivar-group) Os03g0569900 (Os03g0569900) mRNA, partial cds Length = 1709 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 377 tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 426 ||||||||||||||| ||||||||| ||||||||||| ||| ||||||| Sbjct: 346 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 395
>emb|AM293620.1| Platanus x acerifolia partial mRNA for ACBF-like dna binding protein (dbdA gene), clone C4E Length = 651 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 721 tctgtgaaaggagctaaagttattattgatgcaaacacgggccgttctaggggatatgga 780 ||||| ||||| || |||||| ||||||||||||| || |||||||| | || ||||| Sbjct: 444 tctgtaaaaggtgcaaaagttgttattgatgcaaatactggccgttcaaaaggttatggc 503 Query: 781 tttgttaggtttggagatgata 802 ||||| |||||||| ||||||| Sbjct: 504 tttgtgaggtttggtgatgata 525 Score = 48.1 bits (24), Expect = 0.100 Identities = 42/48 (87%) Strand = Plus / Plus Query: 366 gacgatctgggtcggcgacctccagtactggatggacgagaactacct 413 |||||||||||| || ||||| || ||||||||||||| ||| ||||| Sbjct: 89 gacgatctgggttggtgaccttcattactggatggacgggaattacct 136
>gb|BT009238.1| Triticum aestivum clone wlk1.pk0001.f8:fis, full insert mRNA sequence Length = 1160 Score = 60.0 bits (30), Expect = 3e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 636 ttctgatcactcaatttttgttggtgatctagctgttgatgttactgatgacatgttg 693 |||||||||| |||| |||||||||||| | |||| |||||||||||| | ||||||| Sbjct: 134 ttctgatcacacaatatttgttggtgatttggctgctgatgttactgacgccatgttg 191
>emb|AJ292768.1|NPL292768 Nicotiana plumbaginifolia partial mRNA for RNA Binding Protein 47 (rbp47 gene) Length = 1621 Score = 60.0 bits (30), Expect = 3e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 1114 agtggatcaacaattgggaagcaggctgttcgtctttcttggggccgcagtccagcaa 1171 |||||| ||| |||||| |||||||| ||||||||||| ||||| || |||||||||| Sbjct: 1175 agtggagcaataattggcaagcaggcagttcgtctttcctgggggcgaagtccagcaa 1232
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 377 tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 426 ||||||||||||||| ||||||||| ||||||||||| ||| ||||||| Sbjct: 112590 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 112541
>dbj|AK119985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-F11, full insert sequence Length = 1084 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 377 tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 426 ||||||||||||||| ||||||||| ||||||||||| ||| ||||||| Sbjct: 243 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 292
>dbj|AK101593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051E20, full insert sequence Length = 1710 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 377 tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 426 ||||||||||||||| ||||||||| ||||||||||| ||| ||||||| Sbjct: 347 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 396
>gb|AF029351.1|AF029351 Nicotiana tabacum putative RNA binding protein (QRRBP-1) mRNA, partial cds Length = 1682 Score = 60.0 bits (30), Expect = 3e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 1114 agtggatcaacaattgggaagcaggctgttcgtctttcttggggccgcagtccagcaa 1171 |||||| ||| |||||| |||||||| ||||||||||| ||||| || |||||||||| Sbjct: 1215 agtggagcaataattggcaagcaggcagttcgtctttcctggggacgaagtccagcaa 1272
>ref|NM_001067700.1| Oryza sativa (japonica cultivar-group) Os08g0190200 (Os08g0190200) mRNA, complete cds Length = 1467 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactac 411 ||||| ||||| |||| || ||||||||||||||||| ||||||||| Sbjct: 308 ggacgctctggatcggggatctccagtactggatggatgagaactac 354 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Plus Query: 638 ctgatcactcaatttttgttggtgatctagctgttgatgttac 680 ||||| || ||||||||||||||||| | |||| ||||||||| Sbjct: 572 ctgattacacaatttttgttggtgatttggctgctgatgttac 614
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactac 411 ||||| ||||| |||| || ||||||||||||||||| ||||||||| Sbjct: 5266425 ggacgctctggatcggggatctccagtactggatggatgagaactac 5266379 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Minus Query: 638 ctgatcactcaatttttgttggtgatctagctgttgatgttac 680 ||||| || ||||||||||||||||| | |||| ||||||||| Sbjct: 5265538 ctgattacacaatttttgttggtgatttggctgctgatgttac 5265496
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1099H05 Length = 186036 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactac 411 ||||| ||||| |||| || ||||||||||||||||| ||||||||| Sbjct: 134781 ggacgctctggatcggggatctccagtactggatggatgagaactac 134735 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Minus Query: 638 ctgatcactcaatttttgttggtgatctagctgttgatgttac 680 ||||| || ||||||||||||||||| | |||| ||||||||| Sbjct: 133894 ctgattacacaatttttgttggtgatttggctgctgatgttac 133852
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0610E02 Length = 135816 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaactac 411 ||||| ||||| |||| || ||||||||||||||||| ||||||||| Sbjct: 58013 ggacgctctggatcggggatctccagtactggatggatgagaactac 57967 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Minus Query: 638 ctgatcactcaatttttgttggtgatctagctgttgatgttac 680 ||||| || ||||||||||||||||| | |||| ||||||||| Sbjct: 57126 ctgattacacaatttttgttggtgatttggctgctgatgttac 57084
>gb|DQ284479.1| Solanum tuberosum clone 150D12 DNA binding protein ACBF-like mRNA, complete cds Length = 1562 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1125 aattgggaagcaggctgttcgtctttcttggggccgcagtccagcaa 1171 |||||| |||||||| ||||||||||| ||||| || |||||||||| Sbjct: 1166 aattggaaagcaggcagttcgtctttcctgggggcgaagtccagcaa 1212
>emb|CR855147.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0148A10, complete sequence Length = 96027 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 366 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 425 |||| ||||| |||||||||| ||| |||||||||||||| |||| || ||| |||||| Sbjct: 49679 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 49738 Query: 426 cg 427 || Sbjct: 49739 cg 49740
>ref|NM_001060476.1| Oryza sativa (japonica cultivar-group) Os04g0625800 (Os04g0625800) mRNA, complete cds Length = 1597 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 366 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 425 |||| ||||| |||||||||| ||| |||||||||||||| |||| || ||| |||||| Sbjct: 330 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 389 Query: 426 cg 427 || Sbjct: 390 cg 391
>dbj|AK227406.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-06-F04 Length = 1669 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 1113 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1166
>ref|NM_103642.2| Arabidopsis thaliana ATRBP47C; RNA binding (ATRBP47C) mRNA, complete cds Length = 1724 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 1126 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1179
>ref|NM_202255.1| Arabidopsis thaliana ATRBP47C; RNA binding (ATRBP47C) mRNA, complete cds Length = 1837 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 1239 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1292
>ref|NM_103643.2| Arabidopsis thaliana ATRBP47C'; RNA binding (ATRBP47C') mRNA, complete cds Length = 1728 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 1164 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1217
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence Length = 64224 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 366 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 425 |||| ||||| |||||||||| ||| |||||||||||||| |||| || ||| |||||| Sbjct: 20652 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 20711 Query: 426 cg 427 || Sbjct: 20712 cg 20713
>gb|BT018852.1| Zea mays clone EL01N0555H08.d mRNA sequence Length = 1780 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 388 cagtactggatggacgagaactacctccac 417 ||||||||||||||||||||||| |||||| Sbjct: 484 cagtactggatggacgagaactatctccac 513
>gb|AF344325.1| Arabidopsis thaliana putative DNA binding protein (At1g47490) mRNA, complete cds Length = 1299 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 994 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1047
>gb|AY062960.1| Arabidopsis thaliana putative DNA binding protein (At1g47490) mRNA, complete cds Length = 1330 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 994 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1047
>gb|AY035180.1| Arabidopsis thaliana putative DNA binding protein (At1g47490) mRNA, complete cds Length = 1709 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 1126 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1179
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 366 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 425 |||| ||||| |||||||||| ||| |||||||||||||| |||| || ||| |||||| Sbjct: 26579 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 26638 Query: 426 cg 427 || Sbjct: 26639 cg 26640
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19, complete sequence Length = 187601 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 366 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 425 |||| ||||| |||||||||| ||| |||||||||||||| |||| || ||| |||||| Sbjct: 186983 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 187042 Query: 426 cg 427 || Sbjct: 187043 cg 187044
>dbj|AK120834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P13, full insert sequence Length = 1599 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 366 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 425 |||| ||||| |||||||||| ||| |||||||||||||| |||| || ||| |||||| Sbjct: 331 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 390 Query: 426 cg 427 || Sbjct: 391 cg 392
>emb|BX814965.1|CNS0ADXI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZE04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1617 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 1099 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1152
>emb|BX813781.1|CNS0AC3C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB39ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1614 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 1079 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1132
>emb|BX815706.1|CNS0AAGP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS86ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1618 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagtttatcaacaga 1083 |||||||| ||||||||||| ||| |||||| |||||||||||| | |||||| Sbjct: 1095 tctgtcaagattcctgttggtaaaggatgcggatttgttcagtttgttaacaga 1148
>gb|AY109669.1| Zea mays CL866_1 mRNA sequence Length = 1821 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 388 cagtactggatggacgagaactacctccac 417 ||||||||||||||||||||||| |||||| Sbjct: 497 cagtactggatggacgagaactatctccac 526
>gb|AY109460.1| Zea mays CL862_1 mRNA sequence Length = 1796 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Plus Query: 365 ggacgatctgggtcggcgacctccagtactggatggacgagaacta 410 ||||| ||||| |||| ||||| || |||||||||||||||||||| Sbjct: 421 ggacgctctggatcggggacctgcaatactggatggacgagaacta 466 Score = 46.1 bits (23), Expect = 0.39 Identities = 32/35 (91%) Strand = Plus / Plus Query: 957 tgttggcgggcttgaccccaatgttagtgaagatg 991 |||||| ||||||||||||||||| | |||||||| Sbjct: 1019 tgttggtgggcttgaccccaatgtcactgaagatg 1053
>gb|AY107556.1| Zea mays PCO141359 mRNA sequence Length = 378 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 392 actggatggacgagaactacctccac 417 |||||||||||||||||||||||||| Sbjct: 280 actggatggacgagaactacctccac 305
>dbj|AK072804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135B10, full insert sequence Length = 1693 Score = 50.1 bits (25), Expect = 0.025 Identities = 37/41 (90%) Strand = Plus / Plus Query: 371 tctgggtcggcgacctccagtactggatggacgagaactac 411 ||||| |||| || ||||||||||||||||| ||||||||| Sbjct: 442 tctggatcggggatctccagtactggatggatgagaactac 482 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Plus Query: 638 ctgatcactcaatttttgttggtgatctagctgttgatgttac 680 ||||| || ||||||||||||||||| | |||| ||||||||| Sbjct: 700 ctgattacacaatttttgttggtgatttggctgctgatgttac 742
>gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 171769 Score = 50.1 bits (25), Expect = 0.025 Identities = 40/45 (88%) Strand = Plus / Minus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagttt 1074 |||||||| ||||||||||| ||| |||||| |||||||||||| Sbjct: 132147 tctgtcaagattcctgttggtaaaggatgcggatttgttcagttt 132103 Score = 50.1 bits (25), Expect = 0.025 Identities = 40/45 (88%) Strand = Plus / Minus Query: 1030 tctgtcaaaattcctgttgggaaacaatgcggttttgttcagttt 1074 |||||||| ||||||||||| ||| |||||| |||||||||||| Sbjct: 139962 tctgtcaagattcctgttggtaaaggatgcggatttgttcagttt 139918
>dbj|AK122097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125F07, full insert sequence Length = 239 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1548 aagaaattttgacttgctaataaa 1571 |||||||||||||||||||||||| Sbjct: 197 aagaaattttgacttgctaataaa 220
>gb|U90212.1|NTU90212 Nicotiana tabacum DNA binding protein ACBF mRNA, complete cds Length = 1556 Score = 48.1 bits (24), Expect = 0.100 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1114 agtggatcaacaattgggaagcaggctgttcgtctttcttgggg 1157 |||||| ||| |||||| |||||||| ||||||||||| ||||| Sbjct: 1090 agtggagcaataattggcaagcaggcagttcgtctttcctgggg 1133
>gb|AY506544.1| Lycopersicon esculentum DNA-binding protein mRNA, complete cds Length = 1503 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 820 atgactgaaatgaatggcatgtattgctcta 850 |||||||||||||||||||| ||||| |||| Sbjct: 755 atgactgaaatgaatggcatatattgttcta 785
>gb|DQ284458.1| Solanum tuberosum clone 032F12 DNA-binding protein-like mRNA, complete cds Length = 1359 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 820 atgactgaaatgaatggcatgtattgctcta 850 |||||||||||||||||||| ||||| |||| Sbjct: 759 atgactgaaatgaatggcatatattgttcta 789
>gb|BT018319.1| Zea mays clone EL01T0208A09.c mRNA sequence Length = 1019 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 957 tgttggcgggcttgaccccaatgttagtgaagat 990 |||||| ||||||||||||||||| | ||||||| Sbjct: 279 tgttggtgggcttgaccccaatgtcactgaagat 312
>dbj|AB236792.1| Trifolium pratense RNA for putative DNA binding protein, partial cds, clone: C1861 Length = 1438 Score = 44.1 bits (22), Expect = 1.6 Identities = 49/58 (84%) Strand = Plus / Plus Query: 371 tctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcgg 428 ||||| ||||||| | ||||| |||||||||||||| || ||| ||| ||||||||| Sbjct: 178 tctggatcggcgatttgcagtattggatggacgagaattatctctacacctgcttcgg 235
>gb|BT009008.1| Triticum aestivum clone wdk3c.pk0003.a5:fis, full insert mRNA sequence Length = 548 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 385 ctccagtactggatggacgagaactacctc 414 ||||||||||||||||| |||| ||||||| Sbjct: 152 ctccagtactggatggatgagacctacctc 123
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 385 ctccagtactggatggacgagaactacctc 414 ||||||||||||||||| |||| ||||||| Sbjct: 19867159 ctccagtactggatggatgagagctacctc 19867188 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 ctccgcctccgccaccggctg 334 ||||||||||||||||||||| Sbjct: 7699484 ctccgcctccgccaccggctg 7699504
>gb|AC021199.7|AC021199 Arabidopsis thaliana chromosome 1 BAC F7F23 genomic sequence, complete sequence Length = 73252 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 646 tcaatttttgttggtgatctag 667 |||||||||||||||||||||| Sbjct: 55964 tcaatttttgttggtgatctag 55943
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 385 ctccagtactggatggacgagaactacctc 414 ||||||||||||||||| |||| ||||||| Sbjct: 31809 ctccagtactggatggatgagagctacctc 31838
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 385 ctccagtactggatggacgagaactacctc 414 ||||||||||||||||| |||| ||||||| Sbjct: 107318 ctccagtactggatggatgagagctacctc 107347
>dbj|AK062798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C10, full insert sequence Length = 1157 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 385 ctccagtactggatggacgagaactacctc 414 ||||||||||||||||| |||| ||||||| Sbjct: 297 ctccagtactggatggatgagagctacctc 326
>gb|EF051297.1| Gymnadenia conopsea RNA-binding protein-like mRNA, complete sequence Length = 1449 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tactggatggacgagaactac 411 ||||||||||||||||||||| Sbjct: 159 tactggatggacgagaactac 179
>ref|NM_009575.2| Mus musculus zinc finger protein of the cerebellum 3 (Zic3), mRNA Length = 4035 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 996 aagaaaaacatttgcaaaata 1016 ||||||||||||||||||||| Sbjct: 3480 aagaaaaacatttgcaaaata 3500
>ref|NM_001065787.1| Oryza sativa (japonica cultivar-group) Os07g0237700 (Os07g0237700) mRNA, partial cds Length = 596 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 ctccgcctccgccaccggctg 334 ||||||||||||||||||||| Sbjct: 59 ctccgcctccgccaccggctg 39
>emb|CT987621.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 859 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 736 aaagttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttgga 795 |||||| || |||||| ||||| |||||||| | || ||||||||||| |||||||| Sbjct: 226 aaagttgtttttgatgtcaacactggccgttcaaaaggctatggatttgtgaggtttggg 285 Query: 796 gatga 800 ||||| Sbjct: 286 gatga 290
>emb|CT987083.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 826 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 736 aaagttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttgga 795 |||||| || |||||| ||||| |||||||| | || ||||||||||| |||||||| Sbjct: 226 aaagttgtttttgatgtcaacactggccgttcaaaaggctatggatttgtgaggtttggg 285 Query: 796 gatga 800 ||||| Sbjct: 286 gatga 290
>emb|CT986857.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 886 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 736 aaagttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttgga 795 |||||| || |||||| ||||| |||||||| | || ||||||||||| |||||||| Sbjct: 221 aaagttgtttttgatgtcaacactggccgttcaaaaggctatggatttgtgaggtttggg 280 Query: 796 gatga 800 ||||| Sbjct: 281 gatga 285
>emb|CT985991.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 928 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 736 aaagttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttgga 795 |||||| || |||||| ||||| |||||||| | || ||||||||||| |||||||| Sbjct: 216 aaagttgtttttgatgtcaacactggccgttcaaaaggctatggatttgtgaggtttggg 275 Query: 796 gatga 800 ||||| Sbjct: 276 gatga 280
>emb|CT980989.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 826 Score = 42.1 bits (21), Expect = 6.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 736 aaagttattattgatgcaaacacgggccgttctaggggatatggatttgttaggtttgga 795 |||||| || |||||| ||||| |||||||| | || ||||||||||| |||||||| Sbjct: 226 aaagttgtttttgatgtcaacactggccgttcaaaaggctatggatttgtgaggtttggg 285 Query: 796 gatga 800 ||||| Sbjct: 286 gatga 290
>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence Length = 200423 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 tcaccaccacatgccgcagcc 209 ||||||||||||||||||||| Sbjct: 159348 tcaccaccacatgccgcagcc 159368
>gb|AC100511.12| Mus musculus chromosome 3, clone RP23-144N19, complete sequence Length = 200790 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 tcaccaccacatgccgcagcc 209 ||||||||||||||||||||| Sbjct: 168043 tcaccaccacatgccgcagcc 168023
>gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 map X, complete sequence Length = 203953 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 996 aagaaaaacatttgcaaaata 1016 ||||||||||||||||||||| Sbjct: 45536 aagaaaaacatttgcaaaata 45556
>dbj|AK134355.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030442C01 product:zinc finger protein of the cerebellum 3, full insert sequence Length = 3191 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 996 aagaaaaacatttgcaaaata 1016 ||||||||||||||||||||| Sbjct: 3098 aagaaaaacatttgcaaaata 3118
>ref|XM_751105.1| Ustilago maydis 521 hypothetical protein (UM00051.1) partial mRNA Length = 2946 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 510 ctattcccatgcatcagcaga 530 ||||||||||||||||||||| Sbjct: 2681 ctattcccatgcatcagcaga 2701
>gb|AC090259.5| Homo sapiens chromosome 15, clone RP11-424E9, complete sequence Length = 143479 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 885 aagaacttcaggtgattctgg 905 ||||||||||||||||||||| Sbjct: 37221 aagaacttcaggtgattctgg 37201
>gb|AC105014.5| Homo sapiens chromosome 15, clone RP11-466P9, complete sequence Length = 189047 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 885 aagaacttcaggtgattctgg 905 ||||||||||||||||||||| Sbjct: 7146 aagaacttcaggtgattctgg 7166
>emb|AL929171.9| Zebrafish DNA sequence from clone CH211-132P20 in linkage group 4, complete sequence Length = 176577 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 gcacttcagaatttcgctggt 555 ||||||||||||||||||||| Sbjct: 118278 gcacttcagaatttcgctggt 118258
>gb|AC016370.17|AC016370 Homo sapiens chromosome 15 clone RP11-424E9, complete sequence Length = 162773 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 885 aagaacttcaggtgattctgg 905 ||||||||||||||||||||| Sbjct: 56516 aagaacttcaggtgattctgg 56496
>gb|AC109472.4| Homo sapiens chromosome 5 clone RP11-398J12, complete sequence Length = 89357 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 997 agaaaaacatttgcaaaatat 1017 ||||||||||||||||||||| Sbjct: 36831 agaaaaacatttgcaaaatat 36851
>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0565A07 Length = 152191 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 ctccgcctccgccaccggctg 334 ||||||||||||||||||||| Sbjct: 43573 ctccgcctccgccaccggctg 43593
>dbj|AK062400.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E01, full insert sequence Length = 608 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 ctccgcctccgccaccggctg 334 ||||||||||||||||||||| Sbjct: 71 ctccgcctccgccaccggctg 51
>emb|AL592183.10| Human DNA sequence from clone RP11-297D8 on chromosome 22, complete sequence Length = 179198 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 892 tcaggtgattctggcacctct 912 ||||||||||||||||||||| Sbjct: 74595 tcaggtgattctggcacctct 74615
>gb|AY109586.1| Zea mays CL860_-1 mRNA sequence Length = 1420 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 394 tggatggacgagaactacctccacagctgcttc 426 |||||||||||| |||||||| || |||||||| Sbjct: 236 tggatggacgaggactacctctacggctgcttc 268
>emb|AL844850.9| Mouse DNA sequence from clone RP23-255B16 on chromosome 2, complete sequence Length = 179361 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 586 aagttaaattgggcatcatatagtg 610 |||||||||||||||||| |||||| Sbjct: 74338 aagttaaattgggcatcaaatagtg 74314
>emb|AL954389.5| Mouse DNA sequence from clone RP23-321F18 on chromosome X, complete sequence Length = 25193 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 996 aagaaaaacatttgcaaaata 1016 ||||||||||||||||||||| Sbjct: 20009 aagaaaaacatttgcaaaata 20029
>emb|AL772408.4| Mouse DNA sequence from clone RP23-339B20 on chromosome 2, complete sequence Length = 208703 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 caatttttgttggtgatctag 667 ||||||||||||||||||||| Sbjct: 195525 caatttttgttggtgatctag 195505 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 269,907,965 Number of extensions: 14690299 Number of successful extensions: 420573 Number of sequences better than 10.0: 106 Number of HSP's gapped: 420546 Number of HSP's successfully gapped: 208 Length of query: 1616 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1593 Effective length of database: 18,503,978,556 Effective search space: 29476837839708 Effective search space used: 29476837839708 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
