ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74b22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0559000:Os04g0559000 30 1.2
2AK110062: 29 1.5
3Os07g0567500:Os07g0567500 29 1.5
4Os02g0516400:Os02g0516400 28 4.4
5AK068489:Os01g0832900 27 5.7
6AK107263:Os04g0309500 27 7.5
7Os07g0161900:Os07g0161900 27 9.8

>Os04g0559000:Os04g0559000 |
          Length = 760
 Score = 29.6 bits (65), Expect = 1.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 233 PPKKEAWTSSEHGGNGDLGAAVVTIPD 153
           PP+ + W+SS HGG+G     +V + D
Sbjct: 120 PPQGKRWSSSSHGGSGAGAGVIVGVID 146



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>AK110062: |
          Length = 998

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 239 FEPPKKEAWTSSEHGGNGDL 180
           F+  + E WT SEH G+GD+
Sbjct: 801 FQTARMEVWTGSEHDGDGDV 820



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>Os07g0567500:Os07g0567500 |
          Length = 478

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +1

Query: 73  PPFPALFFK*HQRSGSLMPIRCSCKYLSGIVTTAAPRSPFPPC 201
           PP P    +   RS   +P R       G+ TTA+  SPFPPC
Sbjct: 109 PPGPDAARRQQPRSPRPLPTRPR----RGVTTTASSLSPFPPC 147



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>Os02g0516400:Os02g0516400 |
          Length = 408

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -2

Query: 224 KEAWTSSEHG-GNGDLGAAVVTIPDRYLHEHLMGIKEPLR*CYLKNRAGKGGG 69
           +E    S HG G G  G  VV + D     ++  I   LR C L    G GGG
Sbjct: 85  RERERESGHGKGEGWGGGVVVVVVDLMTAPNIEMIASSLRNCSLNGGGGGGGG 137



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>AK068489:Os01g0832900 |
          Length = 729

 Score = 27.3 bits (59), Expect = 5.7
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = -2

Query: 263 KKKLNQEQFEPPKKEAWTSSEHGGNGDLGAAVVTIPDRYLHEHL 132
           K +L+ +  E  +++ +    H G+G +   V++  D + HEH+
Sbjct: 145 KSELDDDNGEDKEEDKFVLGVHDGSGRIEMGVLSAGDDHRHEHV 188



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>AK107263:Os04g0309500 |
          Length = 209

 Score = 26.9 bits (58), Expect = 7.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 290 TR*QPTKKEKKKLNQEQFEPPKKEAWTSSEHGGNGDLGAA 171
           TR   +  + +  ++  F  PKK+ WT++  GG+G  GAA
Sbjct: 14  TRRHTSNADNQPGSRPPFADPKKKGWTATGVGGDGG-GAA 52



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>Os07g0161900:Os07g0161900 |
          Length = 479

 Score = 26.6 bits (57), Expect = 9.8
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = -2

Query: 233 PPKKEAWTSSEHGGNGDLGAAVV-TIPDRYLH---EHLMGIKEPL 111
           PPKK    +S  GG GD G  +V  +  R +H   E  M + + L
Sbjct: 45  PPKKPRVVASGGGGGGDAGPVIVYELTPRVVHVEPEEFMAVVQKL 89


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,948,373
Number of extensions: 338665
Number of successful extensions: 938
Number of sequences better than 10.0: 7
Number of HSP's gapped: 937
Number of HSP's successfully gapped: 7
Length of query: 169
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 76
Effective length of database: 11,676,042
Effective search space: 887379192
Effective search space used: 887379192
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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