Clone Information

BLAST Search Result

Clone Name	FLbaf74b22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOC_Os03g47800:12003.t04141:unspliced-genomic heterogeneous ...	31	0.098
2	LOC_Os01g01600:12001.t00058:unspliced-genomic expressed protein	30	0.18
3	LOC_Os08g43880:12008.t04113:unspliced-genomic expressed protein	35	0.27
4	LOC_Os12g44300:12012.t04096:unspliced-genomic monovalent cat...	32	0.37
5	LOC_Os08g41440:12008.t03873:unspliced-genomic NAD-dependent ...	35	0.52
6	LOC_Os03g26610:12003.t02346:unspliced-genomic transposon pro...	29	0.57
7	LOC_Os02g56920:12002.t05264:unspliced-genomic CER1, putative...	34	0.98
8	LOC_Os09g28340:12009.t02512:unspliced-genomic expressed protein	34	0.98
9	LOC_Os01g08810:12001.t00759:unspliced-genomic cytochrome P45...	33	1.3
10	LOC_Os05g15510:12005.t01322:unspliced-genomic cellulase cont...	33	1.8
11	LOC_Os04g47160:12004.t04243:unspliced-genomic subtilisin-lik...	33	1.8
12	LOC_Os09g01610:12009.t00063:unspliced-genomic clumping facto...	27	2.1
13	LOC_Os07g15430:12007.t01406:unspliced-genomic expressed protein	32	2.5
14	LOC_Os07g02150:12007.t00108:unspliced-genomic 3-5 exonucleas...	27	2.7
15	LOC_Os10g41880:12010.t03418:unspliced-genomic conserved hypo...	32	3.5
16	LOC_Os09g21120:12009.t01846:unspliced-genomic ubiquitin-prot...	32	3.5
17	LOC_Os06g07700:12006.t00652:unspliced-genomic conserved hypo...	32	3.5
18	LOC_Os12g39800:12012.t03659:unspliced-genomic retrotransposo...	32	3.5
19	LOC_Os09g13430:12009.t01133:unspliced-genomic transposon pro...	32	3.5
20	LOC_Os02g38260:12002.t03464:unspliced-genomic hydrolase, hyd...	32	3.5
21	LOC_Os06g11650:12006.t01042:unspliced-genomic erg-1, putativ...	25	3.6
22	LOC_Os12g44010:12012.t04067:unspliced-genomic purple acid ph...	31	4.8
23	LOC_Os08g35010:12008.t03241:unspliced-genomic DNA binding pr...	31	4.8
24	LOC_Os08g12840:12008.t01162:unspliced-genomic 3-hydroxyacyl-...	31	4.8
25	LOC_Os01g53940:12001.t04811:unspliced-genomic expressed protein	31	4.8
26	LOC_Os11g28780:12011.t02489:unspliced-genomic retrotransposo...	26	6.1
27	LOC_Os11g14280:12011.t01259:unspliced-genomic transposon pro...	31	6.6
28	LOC_Os11g02720:12011.t00164:unspliced-genomic expressed protein	31	6.6
29	LOC_Os04g28010:12004.t02502:unspliced-genomic expressed protein	31	6.6
30	LOC_Os02g33590:12002.t03002:unspliced-genomic ubiquitin-prot...	31	6.6
31	LOC_Os07g38020:12007.t03470:unspliced-genomic hypothetical p...	31	6.6
32	LOC_Os01g48874:12001.t04328:unspliced-genomic expressed protein	31	6.6
33	LOC_Os11g15400:12011.t01369:unspliced-genomic retrotransposo...	28	7.3
34	LOC_Os03g54150:12003.t04729:unspliced-genomic expressed protein	25	7.9
35	LOC_Os11g08590:12011.t00751:unspliced-genomic expressed protein	30	9.0
36	LOC_Os11g05210:12011.t00414:unspliced-genomic retrotransposo...	30	9.0
37	LOC_Os10g33830:12010.t02684:unspliced-genomic MATH domain co...	30	9.0
38	LOC_Os05g01780:12005.t00078:unspliced-genomic ZIK1 protein, ...	30	9.0
39	LOC_Os04g23330:12004.t02059:unspliced-genomic hypothetical p...	30	9.0
40	LOC_Os02g41520:12002.t03738:unspliced-genomic glycosyl trans...	30	9.0
41	LOC_Os01g67880:12001.t06145:unspliced-genomic vacuolar prote...	30	9.0
42	LOC_Os08g21590:12008.t01952:unspliced-genomic phosphatidylin...	30	9.1
43	LOC_Os03g01120:12003.t00012:unspliced-genomic plasma membran...	30	9.1
44	LOC_Os01g28244:12001.t02521:unspliced-genomic retrotransposo...	30	9.1

>LOC_Os03g47800:12003.t04141:unspliced-genomic heterogeneous nuclear ribonucleoprotein A2 homolog 2, putative,|
            expressed
          Length = 4563
 Score = 30.9 bits (61), Expect(2) = 0.098
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = -3 / -3

                                                   
Query: 388  WTYIHHNTLCSCCDYLFCHIFKEHNTN*QNDQEQGSNRQ 272
            ++ +HH     CC     H+F   + +  +  ++GS +Q
Sbjct: 2083 YSQVHHGKCLMCCQACLAHMFTRQSYDTTSGADEGSTKQ 1967



 Score = 27.6 bits (54), Expect(2) = 0.098
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1 / -3

                                    
Query: 126 HQRTTSLMLFEEQSREGRWHPFEMI 52
           HQ  TS +LFEE +    W+  E+I
Sbjct: 634 HQELTSFILFEE*NGNNIWNKTELI 560

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>LOC_Os01g01600:12001.t00058:unspliced-genomic expressed protein|
          Length = 3698

 Score = 30.4 bits (60), Expect(3) = 0.18
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3 / +1

                                  
Query: 385 TYIHHNTLCSCCDYLFCHIFKEH 317
           T I H ++C+C  YLF   +KEH
Sbjct: 112 TCIDHVSMCACVAYLFLLSWKEH 180



 Score = 23.1 bits (44), Expect(3) = 0.18
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2 / +2

                        
Query: 41   CTTYTESDNGWW 6
            CT+Y  ++NG W
Sbjct: 3329 CTSYVTNENGVW 3364



 Score = 22.1 bits (42), Expect(3) = 0.18
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1 / +3

                                  
Query: 99   FEEQSREGRWHPFEMIGSSVHN 34
            +E  S   RW P+E  G+ + N
Sbjct: 2481 YECSSSRERWPPWEFNGAQIIN 2546

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>LOC_Os08g43880:12008.t04113:unspliced-genomic expressed protein|
          Length = 1815

 Score = 35.4 bits (71), Expect = 0.27
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2 / +1

                                         
Query: 5   STTRCHSPCMLCTDEPIISNGCHLPSLLCS 94
           S  +C++PC+ C+D P I  G  LP  L S
Sbjct: 163 SRFQCNTPCLSCSDHPCIIAGMSLPGHLAS 252

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>LOC_Os12g44300:12012.t04096:unspliced-genomic monovalent cation proton antiporter, putative, expressed|
          Length = 2749

 Score = 31.8 bits (63), Expect(2) = 0.37
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1 / +2

                         
Query: 198 WWKWGSRRCSGDNP 157
           WW+W  RRC+G  P
Sbjct: 746 WWRWWRRRCAGSPP 787



 Score = 24.0 bits (46), Expect(2) = 0.37
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2 / +2

                                          
Query: 95   KNRAGKGGGTHSR*LARPCTTYTESDNGWW 6
            ++R G+GG     *     TT   S   WW
Sbjct: 1277 RSRRGRGGACSGG*WGCSTTTRRRSSAWWW 1366

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>LOC_Os08g41440:12008.t03873:unspliced-genomic NAD-dependent epimerase/dehydratase family protein, putative,|
            expressed
          Length = 2014

 Score = 34.5 bits (69), Expect = 0.52
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +1 / +2

                        
Query: 352  NKNTRCCDGCKS 387
            NKNTRCC GCKS
Sbjct: 1862 NKNTRCCSGCKS 1897



 Score = 30.9 bits (61), Expect = 6.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3 / -3

                         
Query: 388  WTYIHHNTLCSCC 350
            W Y H++ LCSCC
Sbjct: 1898 WIYTHYSILCSCC 1860



 Score = 30.4 bits (60), Expect = 9.0
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -2 / -2

                         
Query: 389  MDLHPSQHLVFLL 351
            +DLHP QHLVFLL
Sbjct: 1899 LDLHPLQHLVFLL 1861

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>LOC_Os03g26610:12003.t02346:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 3007

 Score = 28.6 bits (56), Expect(2) = 0.57
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3 / -1

                        
Query: 370 NTLCSCCDYLFCH 332
           +T+C+C  Y FCH
Sbjct: 124 DTICTCSSYFFCH 86



 Score = 23.1 bits (44), Expect(2) = 0.57
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2 / -1

                        
Query: 233 PPKKEAWTSSEHG 195
           PP    WT+ EHG
Sbjct: 58  PPLYTLWTNDEHG 20

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>LOC_Os02g56920:12002.t05264:unspliced-genomic CER1, putative, expressed|
          Length = 4319

 Score = 33.6 bits (67), Expect = 0.98
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3 / -1

                                       
Query: 30   VCCARTSQSSRMGATSLPCSVLQIAST 110
            V C R + S R  A+SLPCSVL  +S+
Sbjct: 1658 VRCVRCTTSGRHAASSLPCSVLSYSSS 1578

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>LOC_Os09g28340:12009.t02512:unspliced-genomic expressed protein|
          Length = 1606

 Score = 33.6 bits (67), Expect = 0.98
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1 / +1

                                   
Query: 133 RCSCKYLSGIVTTAAPRSPFPPCS 204
           RCSC+  +G    AAP SP  PCS
Sbjct: 595 RCSCRCSTGATFPAAPVSPGTPCS 666

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>LOC_Os01g08810:12001.t00759:unspliced-genomic cytochrome P450 86A1, putative, expressed|
          Length = 1790

 Score = 33.1 bits (66), Expect = 1.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3 / +2

                                               
Query: 3   APPPVVTLRVCCARTSQSSRMGATSLPCSVLQIAST 110
           +PP   T R C  RTS ++  G +S PCS    A++
Sbjct: 323 SPPTRRTWRTCSRRTSATTPRGRSSPPCSTCSAAAS 430

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>LOC_Os05g15510:12005.t01322:unspliced-genomic cellulase containing protein, expressed|
          Length = 7644

 Score = 32.7 bits (65), Expect = 1.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3 / +1

                                                 
Query: 6   PPPVVTLRVCCARTSQSSRMGATSLPCSVLQIASTKWF 119
           PPP+ +    CA  + SSR   +S P S   +  T W+
Sbjct: 154 PPPLASPSGRCASVAGSSRRAGSSPPSSTPSLTRTSWY 267

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>LOC_Os04g47160:12004.t04243:unspliced-genomic subtilisin-like protease precursor, putative, expressed|
          Length = 2283

 Score = 32.7 bits (65), Expect = 1.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2 / +1

                                      
Query: 233 PPKKEAWTSSEHGGNGDLGAAVVTIPD 153
           PP+ + W+SS HGG+G     +V + D
Sbjct: 358 PPQGKRWSSSSHGGSGAGAGVIVGVID 438

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>LOC_Os09g01610:12009.t00063:unspliced-genomic clumping factor B precursor, putative, expressed|
          Length = 2622

 Score = 27.2 bits (53), Expect(2) = 2.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3 / +2

                        
Query: 153  IRDCHHCSAEIP 188
            I+DCHHC   IP
Sbjct: 1151 IQDCHHCYLHIP 1186



 Score = 25.8 bits (50), Expect(2) = 2.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1 / +3

                            
Query: 70  PPPFPALFFK*HQRSGS 120
           PPP P LFF  H+  G+
Sbjct: 21  PPPLPLLFFFHHRSRGN 71

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>LOC_Os07g15430:12007.t01406:unspliced-genomic expressed protein|
          Length = 2843

 Score = 32.2 bits (64), Expect = 2.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1 / -3

                     
Query: 198 WWKWGSRRCS 169
           WW+WG RRCS
Sbjct: 153 WWRWGGRRCS 124

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>LOC_Os07g02150:12007.t00108:unspliced-genomic 3-5 exonuclease/ nucleic acid binding protein, putative, expressed|
          Length = 980

 Score = 26.7 bits (52), Expect(2) = 2.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1 / +1

                       
Query: 204 GTWWKWGSRRCS 169
           G W  WG+RRCS
Sbjct: 742 GRWPAWGTRRCS 777



 Score = 22.6 bits (43), Expect(2) = 2.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2 / +1

                                
Query: 95  KNRAGKGGGTHSR*LARPCTT 33
           + R+G+ GGT + *    C+T
Sbjct: 823 RGRSGRAGGTRAG*ARSRCST 885

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>LOC_Os10g41880:12010.t03418:unspliced-genomic conserved hypothetical protein|
          Length = 693

 Score = 31.8 bits (63), Expect = 3.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2 / +1

                                                   
Query: 233 PPKKEAWTSSEHGGNGDLGAAVVTIPDRYLHEHLMGIKEP 114
           PP+ + W+SS HGG+G     +V +   +L     G+  P
Sbjct: 304 PPQGKRWSSSSHGGSGAGSGVIVGVFPDHLSFSDAGMPPP 423

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>LOC_Os09g21120:12009.t01846:unspliced-genomic ubiquitin-protein ligase, putative, expressed|
          Length = 2531

 Score = 31.8 bits (63), Expect = 3.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3 / -2

                                       
Query: 6   PPPVVTLRVCCARTSQSSRMGATSLPCS 89
           PPPV T    C RT++      TSL CS
Sbjct: 829 PPPVATCSRQCGRTARRGSTPGTSLSCS 746

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>LOC_Os06g07700:12006.t00652:unspliced-genomic conserved hypothetical protein|
          Length = 1797

 Score = 31.8 bits (63), Expect = 3.5
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3 / +1

                                                      
Query: 502 FFFFLEYIPENATLIE*QF*ETLFCNSNIKIEKLLLFKWTYIH 374
           F FF   + +N+T +E + * T FC   IKI    ++ + YI+
Sbjct: 475 FCFFACLVNQNSTFLEMKI*LTSFCACLIKIPVFWIYIYIYIY 603

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>LOC_Os12g39800:12012.t03659:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 12157

 Score = 31.8 bits (63), Expect = 3.5
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1 / -1

                                                       
Query: 450  NSKKHYSAIAISK*KNCCYSNGLTSITTPCVLVVTTYFVTFSK 322
            N KKH S  A S+*+  C+S  L S TT  +  ++T   T +K
Sbjct: 6364 NPKKHKSKNAQSR*QLYCFSLCLQSATTALLTKISTKLETLTK 6236

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>LOC_Os09g13430:12009.t01133:unspliced-genomic transposon protein, putative, unclassified|
          Length = 2363

 Score = 31.8 bits (63), Expect = 3.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1 / +2

                                      
Query: 58  LEWVPPPFPALFFK*HQRSGSLMPIRC 138
           +EW+P PFP   F+    + ++ P+RC
Sbjct: 824 MEWLPGPFPNTIFRSFTVAITIFPLRC 904

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>LOC_Os02g38260:12002.t03464:unspliced-genomic hydrolase, hydrolyzing O-glycosyl compounds, putative, expressed|
          Length = 2258

 Score = 31.8 bits (63), Expect = 3.5
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1 / -3

                                         
Query: 103  HQRSGSLMPIRCSCKYLSGIVTTAAPRSP 189
            H  SGS  P   S ++L G VTT  P SP
Sbjct: 1926 HWVSGSHSPAAASSRHLHGFVTTLRPSSP 1840

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>LOC_Os06g11650:12006.t01042:unspliced-genomic erg-1, putative, expressed|
          Length = 1311

 Score = 25.4 bits (49), Expect(2) = 3.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1 / -3

                          
Query: 178  PRSPFPPCSDEVQA 219
            PR+P PPC D+  A
Sbjct: 1042 PRAPLPPCLDKCLA 1001



 Score = 23.5 bits (45), Expect(2) = 3.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1 / -1

                       
Query: 331 CDKIGSHNKNTR 366
           CD +GSHN  +R
Sbjct: 999 CDVVGSHNAGSR 964

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>LOC_Os12g44010:12012.t04067:unspliced-genomic purple acid phosphatase precursor, putative, expressed|
          Length = 2433

 Score = 31.3 bits (62), Expect = 4.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3 / -2

                                       
Query: 6    PPPVVTLRVCCARTSQSSRMGATSLPC 86
            PPP   +R CC   S  +R    S PC
Sbjct: 1022 PPPCSGIRCCCTTASARTRSAMASPPC 942

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>LOC_Os08g35010:12008.t03241:unspliced-genomic DNA binding protein, putative, expressed|
          Length = 4667

 Score = 31.3 bits (62), Expect = 4.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2 / -2

                                         
Query: 5    STTRCHSPCMLCTDEPIISNGCHLPSLLC 91
            +TT CH PC+L   E  + N   +P + C
Sbjct: 4378 TTTNCHCPCILHLAEKNVKNNRLIPFIRC 4292

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>LOC_Os08g12840:12008.t01162:unspliced-genomic 3-hydroxyacyl-[acyl-carrier protein] dehydratase/ catalytic,|
            putative, expressed
          Length = 4113

 Score = 31.3 bits (62), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2 / +3

                                        
Query: 263  KKKLNQEQFEPPKKEAWTSSEHGGNGDL 180
            +K+ + EQ +PP +  WTS    G+G L
Sbjct: 3567 QKRRHSEQTKPPPRRRWTSRFSSGSGSL 3650

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>LOC_Os01g53940:12001.t04811:unspliced-genomic expressed protein|
          Length = 1641

 Score = 31.3 bits (62), Expect = 4.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2 / +1

                                    
Query: 68  CHLPSLLCSSNSINEVVL*CPLGVH 142
           C LP ++CS  +IN+  L CPL +H
Sbjct: 901 CALPFVVCSIKTINQN*LHCPLTLH 975

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>LOC_Os11g28780:12011.t02489:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3292

 Score = 25.8 bits (50), Expect(2) = 6.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1 / +3

                       
Query: 198  WWKWGSRRCSG 166
            WWKW +R  +G
Sbjct: 2055 WWKWAARHTAG 2087



 Score = 22.1 bits (42), Expect(2) = 6.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2 / +3

                            
Query: 242  QFEPPKKEAWTSSEHG 195
            ++ P K+  W+S+ HG
Sbjct: 1971 RWRPCKQSGWSSTPHG 2018

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>LOC_Os11g14280:12011.t01259:unspliced-genomic transposon protein, putative, unclassified|
          Length = 6360

 Score = 30.9 bits (61), Expect = 6.6
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3 / +1

                                                   
Query: 448  F*ETLFCNSNIKIEKLLLFKWTYIHHNTLCSCCDYLFCH 332
            F*E L+C++N+  E +L   + Y+      S    L+C+
Sbjct: 4690 F*ERLYCSANLLFEMILKLLYVYVLCQLFISTYSKLYCN 4806

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>LOC_Os11g02720:12011.t00164:unspliced-genomic expressed protein|
          Length = 3795

 Score = 30.9 bits (61), Expect = 6.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2 / +1

                                      
Query: 506 YFFFFFGIYTGECYSDRMTILRNIILQ 426
           +FFF FGIY      D+MT L ++I +
Sbjct: 349 FFFFVFGIYDNMIKPDKMTHLPHLIAE 429

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>LOC_Os04g28010:12004.t02502:unspliced-genomic expressed protein|
          Length = 6554

 Score = 30.9 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2 / +3

                                      
Query: 17   CHSPCMLCTDEPIISNGCHLPSLLCS 94
            CHS  ++C D+  IS G H   ++CS
Sbjct: 4326 CHSLSLVCNDKIYISIGYHFCHMVCS 4403

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>LOC_Os02g33590:12002.t03002:unspliced-genomic ubiquitin-protein ligase, putative, expressed|
          Length = 1672

 Score = 30.9 bits (61), Expect = 6.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2 / +2

                              
Query: 209 SSEHGGNGDLGAAVVTIPD 153
           SSEHGG G  GA ++ +PD
Sbjct: 92  SSEHGGGGGGGAVLLPVPD 148

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>LOC_Os07g38020:12007.t03470:unspliced-genomic hypothetical protein|
          Length = 732

 Score = 30.9 bits (61), Expect = 6.6
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1 / -1

                          
Query: 157 GIVTTAAPRSPFPPC 201
           G+ TTA+  SPFPPC
Sbjct: 471 GVTTTASSLSPFPPC 427

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>LOC_Os01g48874:12001.t04328:unspliced-genomic expressed protein|
          Length = 19015

 Score = 30.9 bits (61), Expect = 6.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1 / -2

                            
Query: 207  IGTWWKWGSRRCSGDN 160
            +G+ W WG R+CSG N
Sbjct: 2889 LGSTWIWGQRQCSGAN 2842

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>LOC_Os11g15400:12011.t01369:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed|
          Length = 5573

 Score = 27.6 bits (54), Expect(2) = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3 / +1

                               
Query: 418  IKIEKLLLFKWTYIHHNTL 362
            +K+ K++LF W  IHH+ L
Sbjct: 958  MKLSKVVLF*WVMIHHSGL 1014



 Score = 24.4 bits (47), Expect(2) = 7.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1 / +2

                       
Query: 204  GTWWKWGSRRC 172
            G WW W  R+C
Sbjct: 2198 GRWWCWPRRQC 2230

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>LOC_Os03g54150:12003.t04729:unspliced-genomic expressed protein|
          Length = 5028

 Score = 25.4 bits (49), Expect(2) = 7.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1 / -1

                       
Query: 195 WKWGSRRCSGDN 160
           WKWG R   G+N
Sbjct: 207 WKWGDRAYGGEN 172



 Score = 22.1 bits (42), Expect(2) = 7.9
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -2 / -2

                                                  
Query: 296 PRTR*QPTKKEKKKLNQEQFEPPKKEAWTSSEHGGNGDL 180
           PR   +PT           F+ P +     ++ GGNG +
Sbjct: 308 PRNAKKPTPIPIPTPKNPSFQEPDRARTERNKRGGNGGI 192

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>LOC_Os11g08590:12011.t00751:unspliced-genomic expressed protein|
          Length = 8853

 Score = 30.4 bits (60), Expect = 9.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3 / +2

                                   
Query: 403  LLLFKWTYIHHNTLCSCCDYLFC 335
            ++++     H NTLCS C+++ C
Sbjct: 5912 VVMYSCLLFHSNTLCSICNHIMC 5980

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>LOC_Os11g05210:12011.t00414:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 6929

 Score = 30.4 bits (60), Expect = 9.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2 / +3

                                
Query: 494  FFGIYTGECYSDRMTILRNI 435
            FFGIY G  +S R T+LR I
Sbjct: 6444 FFGIYVGA*FSPRTTLLREI 6503

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>LOC_Os10g33830:12010.t02684:unspliced-genomic MATH domain containing protein|
          Length = 11645

 Score = 30.4 bits (60), Expect = 9.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2 / -1

                               
Query: 491  FGIYTGECYSDRMTILRNI 435
            FGIY GE +S R T+LR I
Sbjct: 2525 FGIYVGE*FSPRTTLLREI 2469

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>LOC_Os05g01780:12005.t00078:unspliced-genomic ZIK1 protein, putative, expressed|
          Length = 4884

 Score = 30.4 bits (60), Expect = 9.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3 / +3

                                   
Query: 379  IHHNTLCSCCDYLFCHIFKEHNT 311
            IH    CSC D+ FC +F E  T
Sbjct: 4593 IHIRY*CSCLDFCFCFLFLEGKT 4661

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>LOC_Os04g23330:12004.t02059:unspliced-genomic hypothetical protein|
          Length = 2212

 Score = 30.4 bits (60), Expect = 9.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3 / -3

                                       
Query: 424  SNIKIEKLLLFKWTYIHHNTLCSCCDY 344
            SN++ +++  F+  Y HH   C CC Y
Sbjct: 1316 SNVRFDRM*NFRVGYKHHLKNCQCCLY 1236

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>LOC_Os02g41520:12002.t03738:unspliced-genomic glycosyl transferase family 8 protein, expressed|
          Length = 5540

 Score = 30.4 bits (60), Expect = 9.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3 / +2

                                       
Query: 33  CCARTSQSSRMGATSLPCSVLQIASTKW 116
           CC  TS SS  G+++ P +    A+T W
Sbjct: 275 CCTGTSSSSACGSSASPSATRTPAATSW 358

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>LOC_Os01g67880:12001.t06145:unspliced-genomic vacuolar protein sorting protein 53, putative, expressed|
          Length = 5071

 Score = 30.4 bits (60), Expect = 9.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2 / -1

                            
Query: 182  DPHFHHVPMKSRLLFW 229
            D HF H+P+KSRL  W
Sbjct: 2716 DSHFFHLPIKSRLWAW 2669

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>LOC_Os08g21590:12008.t01952:unspliced-genomic phosphatidylinositol 3-kinase, root isoform, putative, expressed|
          Length = 20040

 Score = 30.4 bits (60), Expect = 9.1
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1 / -3

                                 
Query: 501   FFFFWNIYRRMLL**NDNSK 442
             ++F WN Y+RML * N NSK
Sbjct: 10837 YWFSWNSYKRMLQ*LNANSK 10778

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>LOC_Os03g01120:12003.t00012:unspliced-genomic plasma membrane ATPase 1, putative, expressed|
          Length = 10362

 Score = 30.4 bits (60), Expect = 9.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1 / +1

                                       
Query: 349  HNKNTRCCDGCKSI*IATVFLF*YCYC 429
            H +   C DGCK   I     +*+CYC
Sbjct: 2866 H*EGRCCIDGCKGFKIGKSRCY*FCYC 2946

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>LOC_Os01g28244:12001.t02521:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 6141

 Score = 30.4 bits (60), Expect = 9.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1 / -3

                                  
Query: 127  PIRCSCKYLSGIVTTAAPRSPF 192
            P+ C C  L G+ T+  P+SPF
Sbjct: 4465 PMPC*CMQLGGLATSVQPQSPF 4400


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 224,041,311
Number of extensions: 3741153
Number of successful extensions: 18692
Number of sequences better than 10.0: 44
Length of query: 169
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 121
Effective length of database: 52,912,542
Effective search space: 6402417582
Effective search space used: 6402417582
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result