ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74b22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q5XIG0:NUDT9_RAT ADP-ribose pyrophosphatase, mitochondrial precu... 32 1.2

>Q5XIG0:NUDT9_RAT ADP-ribose pyrophosphatase, mitochondrial precursor - Rattus|
           norvegicus (Rat)
          Length = 350
 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 154 SGIVTTAAPRSPFPPCSDEVQASFLGGSN 240
           SG     APR+PFP C   ++A+ + GSN
Sbjct: 27  SGCRAIPAPRNPFPSCGFHLKANIMSGSN 55


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 90,023,042
Number of extensions: 1963155
Number of successful extensions: 4457
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4456
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 100,686,439
Length adjustment: 105
Effective length of query: 64
Effective length of database: 71,885,464
Effective search space: 4600669696
Effective search space used: 4600669696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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