ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74b22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL591611.8| Mouse DNA sequence from clone RP23-228D6 on chro... 44 0.47
2gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 42 1.9
3ref|NM_140776.2| Drosophila melanogaster CG13699-RA (CG13699), mRNA 42 1.9
4gb|AC104507.5| Drosophila melanogaster 3L BAC RP98-26J11 (Roswel... 42 1.9
5gb|AC010003.8| Drosophila melanogaster 3L BAC RP98-6L11 (Roswell... 42 1.9
6gb|AY070905.1| Drosophila melanogaster RE02096 full length cDNA 42 1.9
7gb|AC188062.1| Callithrix jacchus chromosome UNK clone CH259-60H... 40 7.4
8gb|AC185971.2| Pan troglodytes BAC clone CH251-648P12 from chrom... 40 7.4
9gb|AC182652.2| Populus trichocarpa clone Pop1-120B14, complete s... 40 7.4
10dbj|AB232919.1| Oryzias latipes hox gene cluster, complete cds, ... 40 7.4
11ref|XM_390818.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 7.4
12gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 7.4
13gb|AC104437.2| Homo sapiens chromosome 3 clone RP11-734E15, comp... 40 7.4
14gb|AC096756.3| Homo sapiens BAC clone RP11-526A4 from 4, complet... 40 7.4
15gb|AC093661.4| Homo sapiens BAC clone RP11-472K22 from 4, comple... 40 7.4
16emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chro... 40 7.4
17dbj|AP000045.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 7.4
18dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 7.4
19emb|CR380949.1| Candida glabrata strain CBS138 chromosome C comp... 40 7.4
20gb|AC104686.2| Homo sapiens BAC clone RP11-74M11 from 4, complet... 40 7.4
21gb|AC119043.4| Homo sapiens 3 BAC RP11-582I9 (Roswell Park Cance... 40 7.4
22dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Gloss... 40 7.4
23dbj|BS000154.1| Pan troglodytes chromosome 22 clone:RP43-091K15,... 40 7.4
24gb|AC010175.4| Homo sapiens 12 BAC RP11-118B22 (Roswell Park Can... 40 7.4
25gb|AF039906.1|AF039906 Homo sapiens cosmid D16B8, chromosome 21 ... 40 7.4
26emb|AL954218.1| Pan troglodytes chromosome 22 clone PTB-451A22 m... 40 7.4
27dbj|AP001717.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.4
28emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chr... 40 7.4
29dbj|AP000189.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.4
30dbj|AP000301.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.4
31dbj|AP000113.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 7.4 
>emb|AL591611.8| Mouse DNA sequence from clone RP23-228D6 on chromosome 4 Contains three
             novel genes, complete sequence
          Length = 140771
 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 318   tgttctttgaaaatgtgacaaa 339
             ||||||||||||||||||||||
Sbjct: 21931 tgttctttgaaaatgtgacaaa 21910
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>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 5        tccaccacccgttgtcactct 25
                |||||||||||||||||||||
Sbjct: 18152618 tccaccacccgttgtcactct 18152638
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>ref|NM_140776.2| Drosophila melanogaster CG13699-RA (CG13699), mRNA
          Length = 3752

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   tccaccacccgttgtcactct 25
           |||||||||||||||||||||
Sbjct: 506 tccaccacccgttgtcactct 486
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>gb|AC104507.5| Drosophila melanogaster 3L BAC RP98-26J11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 183911

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      tccaccacccgttgtcactct 25
              |||||||||||||||||||||
Sbjct: 165463 tccaccacccgttgtcactct 165483
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>gb|AC010003.8| Drosophila melanogaster 3L BAC RP98-6L11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 183291

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     tccaccacccgttgtcactct 25
             |||||||||||||||||||||
Sbjct: 45870 tccaccacccgttgtcactct 45890
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>gb|AY070905.1| Drosophila melanogaster RE02096 full length cDNA
          Length = 3763

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   tccaccacccgttgtcactct 25
           |||||||||||||||||||||
Sbjct: 506 tccaccacccgttgtcactct 486
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>gb|AC188062.1| Callithrix jacchus chromosome UNK clone CH259-60H12, complete sequence
          Length = 178365

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   gaataatgtttcttagaatt 450
             ||||||||||||||||||||
Sbjct: 83859 gaataatgtttcttagaatt 83840
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>gb|AC185971.2| Pan troglodytes BAC clone CH251-648P12 from chromosome unknown, complete
              sequence
          Length = 227874

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 385    tccatttgaatagcaacagttttt 408
              |||||||||||||||||| |||||
Sbjct: 175672 tccatttgaatagcaacatttttt 175695
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>gb|AC182652.2| Populus trichocarpa clone Pop1-120B14, complete sequence
          Length = 103155

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   tccatttgaatagcaacagttttt 408
             ||||||||||||||||||| ||||
Sbjct: 11207 tccatttgaatagcaacagatttt 11230
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>dbj|AB232919.1| Oryzias latipes hox gene cluster, complete cds, contains hoxAb
          Length = 240727

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  tgtgttctttgaaaatgtgacaaa 339
            |||| |||||||||||||||||||
Sbjct: 3673 tgtgctctttgaaaatgtgacaaa 3696
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>ref|XM_390818.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10642.1)
           partial mRNA
          Length = 354

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  cttccctgctctgttcttca 97
           ||||||||||||||||||||
Sbjct: 220 cttccctgctctgttcttca 201
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 200     gttccgatgaagtccaggct 219
               ||||||||||||||||||||
Sbjct: 1227168 gttccgatgaagtccaggct 1227187
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>gb|AC104437.2| Homo sapiens chromosome 3 clone RP11-734E15, complete sequence
          Length = 177100

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   cccattaggtgttcatgcaa 146
             ||||||||||||||||||||
Sbjct: 47321 cccattaggtgttcatgcaa 47302
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>gb|AC096756.3| Homo sapiens BAC clone RP11-526A4 from 4, complete sequence
          Length = 151018

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    tcattttgttaattggtatt 316
              ||||||||||||||||||||
Sbjct: 103922 tcattttgttaattggtatt 103941
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>gb|AC093661.4| Homo sapiens BAC clone RP11-472K22 from 4, complete sequence
          Length = 152381

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    agaataatgtttcttagaat 449
              ||||||||||||||||||||
Sbjct: 127003 agaataatgtttcttagaat 127022
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>emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chromosome 9, complete
              sequence
          Length = 117273

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    atccccatttccaccatgtt 202
              ||||||||||||||||||||
Sbjct: 109600 atccccatttccaccatgtt 109581
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>dbj|AP000045.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 16/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   tccatttgaatagcaacagttttt 408
             |||||||||||||||||| |||||
Sbjct: 86903 tccatttgaatagcaacatttttt 86926
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     gttcaaattgttcttggttt 252
               ||||||||||||||||||||
Sbjct: 1649818 gttcaaattgttcttggttt 1649837
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>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence
          Length = 558804

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    ttttgatattgctattgcag 431
              ||||||||||||||||||||
Sbjct: 544839 ttttgatattgctattgcag 544820
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>gb|AC104686.2| Homo sapiens BAC clone RP11-74M11 from 4, complete sequence
          Length = 149964

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    tttgaaaatgtgacaaaata 342
              ||||||||||||||||||||
Sbjct: 101258 tttgaaaatgtgacaaaata 101277
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>gb|AC119043.4| Homo sapiens 3 BAC RP11-582I9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164027

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    gtttttctattttgatattg 422
              ||||||||||||||||||||
Sbjct: 146247 gtttttctattttgatattg 146266
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>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA,
              complete genome
          Length = 697724

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    tattttgatattgctattgcagaa 433
              ||||||||| ||||||||||||||
Sbjct: 169961 tattttgatgttgctattgcagaa 169938
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>dbj|BS000154.1| Pan troglodytes chromosome 22 clone:RP43-091K15, map 22, complete
             sequences
          Length = 155153

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   tccatttgaatagcaacagttttt 408
             |||||||||||||||||| |||||
Sbjct: 35307 tccatttgaatagcaacatttttt 35330
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>gb|AC010175.4| Homo sapiens 12 BAC RP11-118B22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 127277

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   cacaacaagaacacaaggtg 368
             ||||||||||||||||||||
Sbjct: 45615 cacaacaagaacacaaggtg 45634
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>gb|AF039906.1|AF039906 Homo sapiens cosmid D16B8, chromosome 21 3' of IFNGR2
          Length = 25746

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 385  tccatttgaatagcaacagttttt 408
            |||||||||||||||||| |||||
Sbjct: 7554 tccatttgaatagcaacatttttt 7577
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>emb|AL954218.1| Pan troglodytes chromosome 22 clone PTB-451A22 map 22q22.11, complete
             sequence
          Length = 124250

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   tccatttgaatagcaacagttttt 408
             |||||||||||||||||| |||||
Sbjct: 77971 tccatttgaatagcaacatttttt 77994
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>dbj|AP001717.1| Homo sapiens genomic DNA, chromosome 21q, section 61/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   tccatttgaatagcaacagttttt 408
             |||||||||||||||||| |||||
Sbjct: 74053 tccatttgaatagcaacatttttt 74076
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>emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chromosome 11, complete
              sequence
          Length = 221399

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 129    cattaggtgttcatgcaaatacct 152
              ||||||||||||| ||||||||||
Sbjct: 186714 cattaggtgttcaggcaaatacct 186737
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>dbj|AP000189.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 16/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   tccatttgaatagcaacagttttt 408
             |||||||||||||||||| |||||
Sbjct: 92879 tccatttgaatagcaacatttttt 92902
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>dbj|AP000301.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:D16B8, complete sequence
          Length = 17471

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 385  tccatttgaatagcaacagttttt 408
            |||||||||||||||||| |||||
Sbjct: 3693 tccatttgaatagcaacatttttt 3716
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>dbj|AP000113.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 16/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   tccatttgaatagcaacagttttt 408
             |||||||||||||||||| |||||
Sbjct: 92879 tccatttgaatagcaacatttttt 92902


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 96,839,422
Number of extensions: 5368819
Number of successful extensions: 107480
Number of sequences better than 10.0: 31
Number of HSP's gapped: 107480
Number of HSP's successfully gapped: 31
Length of query: 507
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 485
Effective length of database: 18,508,616,841
Effective search space: 8976679167885
Effective search space used: 8976679167885
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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