ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf83c16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O95159:ZFPL1_HUMAN Zinc finger protein-like 1 - Homo sapiens (Hu... 88 7e-17
2Q9DB43:ZFPL1_MOUSE Zinc finger protein-like 1 - Mus musculus (Mo... 86 3e-16
3P62447:ZFPL1_DANRE Zinc finger protein-like 1 - Danio rerio (Zeb... 78 7e-14
4P28829:BYR2_SCHPO Protein kinase byr2 - Schizosaccharomyces pomb... 32 4.7
5P26013:ITB8_RABIT Integrin beta-8 precursor - Oryctolagus cunicu... 32 8.0

>O95159:ZFPL1_HUMAN Zinc finger protein-like 1 - Homo sapiens (Human)|
          Length = 310
 Score = 88.2 bits (217), Expect = 7e-17
 Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
 Frame = +2

Query: 74  MVVCKC--RKATRVYCFVHQVPVCGECICSPEHQLCVVKNYAEWVVNSDYDWPQHCSLCN 247
           M +CKC  RK T ++CF H+V VC  C+ +  H  C+V++Y +W+ +SDY+   +C LCN
Sbjct: 1   MGLCKCPKRKVTNLFCFEHRVNVCEHCLVA-NHAKCIVQSYLQWLQDSDYN--PNCRLCN 57

Query: 248 LVLEAASEETTRLGCLHVMHTKCLISHVQSFPAQTAPAGF 367
           + L  AS ETTRL C  + H  CL       P  TAPAG+
Sbjct: 58  IPL--ASRETTRLVCYDLFHWACLNERAAQLPRNTAPAGY 95



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>Q9DB43:ZFPL1_MOUSE Zinc finger protein-like 1 - Mus musculus (Mouse)|
          Length = 310

 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
 Frame = +2

Query: 74  MVVCKC--RKATRVYCFVHQVPVCGECICSPEHQLCVVKNYAEWVVNSDYDWPQHCSLCN 247
           M +CKC  RK T ++CF H+V VC  C+ +  H  C+V++Y +W+ +SDY+   +C LCN
Sbjct: 1   MGLCKCPKRKVTNLFCFEHRVNVCEHCLVA-NHAKCIVQSYLQWLQDSDYN--PNCRLCN 57

Query: 248 LVLEAASEETTRLGCLHVMHTKCLISHVQSFPAQTAPAGF 367
             L  AS ETTRL C  + H  C+       P  TAPAG+
Sbjct: 58  TPL--ASRETTRLVCYDLFHWACINERAAQLPRNTAPAGY 95



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>P62447:ZFPL1_DANRE Zinc finger protein-like 1 - Danio rerio (Zebrafish) (Brachydanio|
           rerio)
          Length = 317

 Score = 78.2 bits (191), Expect = 7e-14
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
 Frame = +2

Query: 74  MVVCKC--RKATRVYCFVHQVPVCGECICSPEHQLCVVKNYAEWVVNSDYDWPQHCSLCN 247
           M +CKC  +K T ++CF H+V VC  C+ S  H  C+V++Y +W+ +SDY+   +CSLC 
Sbjct: 1   MGLCKCPKKKVTNLFCFKHRVNVCEHCLVS-NHNKCIVQSYLQWLQDSDYN--PNCSLCI 57

Query: 248 LVLEAASEETTRLGCLHVMHTKCLISHVQSFPAQTAPAGF 367
             L+  S++T RL C  + H  CL       P  TAP G+
Sbjct: 58  QPLD--SQDTVRLVCYDLFHWSCLNELASHQPLNTAPDGY 95



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>P28829:BYR2_SCHPO Protein kinase byr2 - Schizosaccharomyces pombe (Fission yeast)|
          Length = 659

 Score = 32.3 bits (72), Expect = 4.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 749 PEQEPNFIRSPSPHGPSATTRKGANYVERQNSEMS 853
           P   P+FI  PSP  P++TT +  N +E    + S
Sbjct: 357 PGSSPSFIEQPSPISPTSTTSEDTNTLEEDTDDQS 391



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>P26013:ITB8_RABIT Integrin beta-8 precursor - Oryctolagus cuniculus (Rabbit)|
          Length = 768

 Score = 31.6 bits (70), Expect = 8.0
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 83  CKCRKATRVYCFVHQVPVCGECICSPEHQLCVVKNYAEWVVNSDYDWP-QHCSLC 244
           CK  +   V C    V VCG+C+C   H++ + K Y ++    D+  P  H SLC
Sbjct: 511 CKAHEDQPV-CSGRGVCVCGKCLC---HKMKLGKVYGKYCEKDDFSCPYHHGSLC 561


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 248,855,114
Number of extensions: 5700839
Number of successful extensions: 14703
Number of sequences better than 10.0: 5
Number of HSP's gapped: 14686
Number of HSP's successfully gapped: 5
Length of query: 453
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 336
Effective length of database: 68,593,924
Effective search space: 23047558464
Effective search space used: 23047558464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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