| Clone Name | FLbaf82o11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066902.1| Oryza sativa (japonica cultivar-group) Os07g0632600 (Os07g0632600) mRNA, complete cds Length = 2719 Score = 1138 bits (574), Expect = 0.0 Identities = 1093/1266 (86%) Strand = Plus / Plus Query: 53 atggcgattccggaggaggtgcgccgctactggctgccgatcctcctcgccgccggcggc 112 ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 373 atggcgattccggcggaggtgcgccgctactggctgcccatcctcctcgccgccgtcggg 432 Query: 113 ttcctcttccagctcctcgtcctgcccaaatcatttccgccctcccactacgacgcgctc 172 |||||||||||||||||||||||||||| || || |||||| |||||||| ||||||| Sbjct: 433 ttcctcttccagctcctcgtcctgcccatctccttcccgcccacccactactacgcgctt 492 Query: 173 ggaatccagaggtttgcgccggtcgagaaggtggtcgaggcatacgagctgctctccagg 232 || ||| ||||||| |||||||| |||| |||||| ||||| ||||||| |||||||| | Sbjct: 493 gggatcgagaggttcgcgccggtggagagggtggtggaggcctacgagcagctctccaag 552 Query: 233 gagtgggttgctgaaacgaatgaccagtcaactgttgatattataaagatccgttatgcg 292 |||||| | ||||| |||||| | || |||||||||||||||||||||| |||||||| Sbjct: 553 gagtggctcgctgagacgaatcagcaaacaactgttgatattataaagattcgttatgca 612 Query: 293 tatgagttgttgacaaatccagttttgaagcgggactatgatctttttggtctggatcat 352 |||||| |||||||||||||| ||||||| |||| |||||||||||||||||||| ||| Sbjct: 613 tatgagctgttgacaaatccaattttgaaaagggattatgatctttttggtctggaccat 672 Query: 353 catacggatgtcctcgagagtgtcaaagaacaatatcaaagggagcactttctgaaaata 412 |||| ||||||||| |||| ||||||||||| ||||||| ||| |||||| |||||||| Sbjct: 673 cataaggatgtccttgagaaagtcaaagaacagtatcaaaaggaacactttttgaaaata 732 Query: 413 gatctacccattttaaaagattctttaattcaatcgactgatgatgccttcaatgtactc 472 ||||| ||| | ||||| ||||||| | ||||||| |||||| | |||||||| ||||| Sbjct: 733 gatctccccttgttaaaggattcttcagttcaatcaactgattacgccttcaacgtactg 792 Query: 473 acatatgaggcattggtgtctgctattggtgaagattacccgttgctcatactggtttat 532 || ||| |||| || | |||||| ||| || |||| |||||||| |||| ||| Sbjct: 793 ggctacgagtcattcatgcatactattgctgacgaacacccactgctcataatggtgtat 852 Query: 533 tcaaaggggagtcctcgctgcgctcaattttttgagtattggaagcaaattgacactcga 592 |||||||| |||||||| || ||||||||| |||| | ||||||||||| | || ||| Sbjct: 853 tcaaagggtagtcctcggtgtgctcaatttattgaaaaatggaagcaaatcggcagccga 912 Query: 593 ctggatggcgtggccaacactgctatggtagaacttggtgatacacgactggcagggtat 652 |||||||| || || ||||||||||||||||||||||||||| | |||| | || || Sbjct: 913 ctggatggtgtagcaaacactgctatggtagaacttggtgatgtgcaactgactggtcat 972 Query: 653 tttgcagaaaaaaggttctctcagcagccatttttccgcaacggtataccagctcttgtt 712 ||||||||| ||||||||||| | |||||||||||||| || ||| |||| |||||||| Sbjct: 973 tttgcagaacaaaggttctctaaacagccatttttccgtaatggtctacccactcttgtt 1032 Query: 713 gcatatcctgctaactgcagaagtccatcctgttatatgaggtacccaggtgagctaact 772 ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 1033 gcataccctgcagactgcagaagtccatcctgttacatgaggtacccaggtgagcttttt 1092 Query: 773 gtggattctgttgtcaactgggttgcatcgtcaattgttggtttacctcggatcttgtac 832 |||||||||||||| ||||||| ||| ||||| |||||||||||||||| ||||||||| Sbjct: 1093 gtggattctgttgttgactgggtggcaacgtcagttgttggtttacctcgtatcttgtac 1152 Query: 833 tattcaaaggagacactgggaccccagttcattgggaagaatagccatcataaggtgaag 892 ||||| ||||||||| |||| || ||||||||||||||| ||||||||||||| ||| Sbjct: 1153 tattccaaggagacattggggcctgagttcattgggaagagcggccatcataaggtcaag 1212 Query: 893 gctatctttttctcaagcaccggggagcgtgcggctccatttcttcgccaagctgcccaa 952 | ||||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 1213 gttatctttttctcaagtaccggggaacgtgctgctccattccttcgccaagctgcccaa 1272 Query: 953 gagtattcgagctatgcatcgtttgcatttgtcctatggaaagaagaggaatcccagatc 1012 |||||||||| ||||||||| |||||||||||| ||||||||||||| ||||| ||||| Sbjct: 1273 gagtattcgacctatgcatcatttgcatttgtcttatggaaagaagatgaatctcagatt 1332 Query: 1013 tggtggaattcattaggagtggaatcggctcctgcacttgttttcttgaagggaccaggt 1072 ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1333 tggtggaattcgttaggagtggaatcagctccatcacttgttttcttgaagggaccaggt 1392 Query: 1073 gccaagcctgttgtataccatggaacttttagcaagtcagagttcacagagataatggag 1132 |||||||| ||||||||||||||||||||| |||||||||||| ||| ||||||||||| Sbjct: 1393 gccaagcccattgtataccatggaacttttaccaagtcagagtttacaaagataatggag 1452 Query: 1133 gagcacaagcaccaagaactccagcagctaagaagcgacacatctttggatcttggttgt 1192 ||||| |||||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 1453 gagcataagcaccaagaactcccacagctaagaagcgatacatctttggagctgggttgt 1512 Query: 1193 gatgctagaggtcattcacgcgctggaaaagaaatgatgatatggtactgtgtaatagct 1252 ||||| |||||| ||||||| |||||||| || || || ||||| |||||||| | | Sbjct: 1513 gatgccagaggttattcacgtgctggaaatgatatagcaatttggtattgtgtaattgtt 1572 Query: 1253 gcaggccgccctggtgtagaattaagtaaaaagagacaaattttgaggaaggcccaggac 1312 || || || |||||| |||| ||||||||| |||||| |||||| |||||||||| ||| Sbjct: 1573 gctggtcgtcctggtatagagctaagtaaaaggagacagattttgcggaaggcccaagac 1632 Query: 1313 caacta 1318 |||||| Sbjct: 1633 caacta 1638 Score = 468 bits (236), Expect = e-128 Identities = 488/572 (85%) Strand = Plus / Plus Query: 1366 ggtagcaagtgctgcaactgccttaaaagatgacaggcttacctttgtttggttggatgg 1425 |||| ||||||| || |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1689 ggtatcaagtgccgcggctgccttaaaagatgacaggttgacctttgtttggttggatgg 1748 Query: 1426 agaattacagaagaaactttgtgccttctaccttgccactgattaccatggagcctgtgg 1485 |||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 1749 agaagtgcagaagaaactttgtgccttctaccttgcaactgattacagtggagcctgtgg 1808 Query: 1486 tcctagaggctttgaagatgacaatgataagcctgaagtattcattgtccgtttccaaag 1545 |||| |||| |||| |||||| |||||||| ||||| | || ||||| ||||||||||| Sbjct: 1809 tcctggaggttttggagatgataatgataaatctgaactgtttattgttcgtttccaaag 1868 Query: 1546 aaatgcaacatatgaggcgttgaaagctgacaaaaagaataatcttatagagactctcca 1605 ||||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 1869 aaatgcaacatttgaggcgttgaaagctgagaaaacaaataatcttatggaggctctcca 1928 Query: 1606 gggacaggatattcctgatgcctcccagcttgtggctaggtataatggcccggatgaaat 1665 ||||| ||| |||||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 1929 aagacagcataccgctgatgcctcccagctagtggcaaggtataaaggcccggacgaaat 1988 Query: 1666 tctggagataaacaagtgggtctctcagattatcaaagatggagatactagagaaatccc 1725 |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| || Sbjct: 1989 agaggagataaacaaatggatctctcagattatcaaagatggagatactagggaaatacc 2048 Query: 1726 ttattttacttcaaaggtaccggatcttttacccgaggaaacaagtaaagaatggttaag 1785 ||| ||||||||||||||||| |||||| | || |||||||||||||| |||||| ||| Sbjct: 2049 ttactttacttcaaaggtaccagatcttgtgcctgaggaaacaagtaaggaatggataaa 2108 Query: 1786 tggtaccaaaagcatccgctcggccgggaaaagtttaaaagagagggttcagaacagtgg 1845 |||||||||| |||||||| || || || ||| ||||| ||||| | |||| |||||| Sbjct: 2109 aagtaccaaaagtatccgctcagcaggaaacagtgtaaaacagaggatccagagcagtgg 2168 Query: 1846 cttcagtttcagtgattacttaacagacccaagggttggtccagctttgctgatgcttgc 1905 || |||| | |||||| | || ||||||||| | || ||||||||||| ||| ||| Sbjct: 2169 atttcatttcggagattacctgactgacccaaggatcggcccagctttgcttatgtctgc 2228 Query: 1906 gtgcatttcatggggaacaatatggttcaaga 1937 ||||||||| ||||| |||||||| ||||| Sbjct: 2229 atgcatttcaatgggaataatatggtacaaga 2260 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 2052 ctgatcctgagcccaaagatgctcgtgagtgggagat 2088 |||||||||| ||||||||||||||| |||||||||| Sbjct: 2381 ctgatcctgaacccaaagatgctcgtcagtgggagat 2417
>dbj|AK102629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099L01, full insert sequence Length = 2720 Score = 1130 bits (570), Expect = 0.0 Identities = 1092/1266 (86%) Strand = Plus / Plus Query: 53 atggcgattccggaggaggtgcgccgctactggctgccgatcctcctcgccgccggcggc 112 ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 374 atggcgattccggcggaggtgcgccgctactggctgcccatcctcctcgccgccgtcggg 433 Query: 113 ttcctcttccagctcctcgtcctgcccaaatcatttccgccctcccactacgacgcgctc 172 |||||||||||||||||||||||||||| || || |||||| |||||||| ||||||| Sbjct: 434 ttcctcttccagctcctcgtcctgcccatctccttcccgcccacccactactacgcgctt 493 Query: 173 ggaatccagaggtttgcgccggtcgagaaggtggtcgaggcatacgagctgctctccagg 232 || ||| ||||||| |||||||| |||| |||||| ||||| ||||||| |||||||| | Sbjct: 494 gggatcgagaggttcgcgccggtggagagggtggtggaggcctacgagcagctctccaag 553 Query: 233 gagtgggttgctgaaacgaatgaccagtcaactgttgatattataaagatccgttatgcg 292 |||||| | ||||| |||||| | || |||||||||||||||||||||| |||||||| Sbjct: 554 gagtggctcgctgagacgaatcagcaaacaactgttgatattataaagattcgttatgca 613 Query: 293 tatgagttgttgacaaatccagttttgaagcgggactatgatctttttggtctggatcat 352 |||||| |||||||||||||| ||||||| |||| |||||||||||||||||||| ||| Sbjct: 614 tatgagctgttgacaaatccaattttgaaaagggattatgatctttttggtctggaccat 673 Query: 353 catacggatgtcctcgagagtgtcaaagaacaatatcaaagggagcactttctgaaaata 412 |||| ||||||||| |||| ||||||||||| ||||||| ||| |||||| |||||||| Sbjct: 674 cataaggatgtccttgagaaagtcaaagaacagtatcaaaaggaacactttttgaaaata 733 Query: 413 gatctacccattttaaaagattctttaattcaatcgactgatgatgccttcaatgtactc 472 ||||| ||| | ||||| ||||||| | ||||||| |||||| | |||||||| ||||| Sbjct: 734 gatctccccttgttaaaggattcttcagttcaatcaactgattacgccttcaacgtactg 793 Query: 473 acatatgaggcattggtgtctgctattggtgaagattacccgttgctcatactggtttat 532 || ||| |||| || | |||||| ||| || |||| |||||||| |||| ||| Sbjct: 794 ggctacgagtcattcatgcatactattgctgacgaacacccactgctcataatggtgtat 853 Query: 533 tcaaaggggagtcctcgctgcgctcaattttttgagtattggaagcaaattgacactcga 592 |||||||| |||||||| || ||||||||| |||| | ||||||||||| | || ||| Sbjct: 854 tcaaagggtagtcctcggtgtgctcaatttattgaaaaatggaagcaaatcggcagccga 913 Query: 593 ctggatggcgtggccaacactgctatggtagaacttggtgatacacgactggcagggtat 652 |||||||| || || ||||||||||||||||||||||||||| | |||| | || || Sbjct: 914 ctggatggtgtagcaaacactgctatggtagaacttggtgatgtgcaactgactggtcat 973 Query: 653 tttgcagaaaaaaggttctctcagcagccatttttccgcaacggtataccagctcttgtt 712 ||||||||| ||||||||||| | |||||||||||||| || ||| |||| |||||||| Sbjct: 974 tttgcagaacaaaggttctctaaacagccatttttccgtaatggtctacccactcttgtt 1033 Query: 713 gcatatcctgctaactgcagaagtccatcctgttatatgaggtacccaggtgagctaact 772 ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 1034 gcataccctgcagactgcagaagtccatcctgttacatgaggtacccaggtgagcttttt 1093 Query: 773 gtggattctgttgtcaactgggttgcatcgtcaattgttggtttacctcggatcttgtac 832 |||||||||||||| ||||||| ||| ||||| |||||||||||||||| ||||||||| Sbjct: 1094 gtggattctgttgttgactgggtggcaacgtcagttgttggtttacctcgtatcttgtac 1153 Query: 833 tattcaaaggagacactgggaccccagttcattgggaagaatagccatcataaggtgaag 892 ||||| ||||||||| |||| || ||||||||||||||| ||||||||||||| ||| Sbjct: 1154 tattccaaggagacattggggcctgagttcattgggaagagcggccatcataaggtcaag 1213 Query: 893 gctatctttttctcaagcaccggggagcgtgcggctccatttcttcgccaagctgcccaa 952 | ||||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 1214 gttatctttttctcaagtaccggggaacgtgctgctccattccttcgccaagctgcccaa 1273 Query: 953 gagtattcgagctatgcatcgtttgcatttgtcctatggaaagaagaggaatcccagatc 1012 ||||||| || ||||||||| |||||||||||| ||||||||||||| ||||| ||||| Sbjct: 1274 gagtattagacctatgcatcatttgcatttgtcttatggaaagaagatgaatctcagatt 1333 Query: 1013 tggtggaattcattaggagtggaatcggctcctgcacttgttttcttgaagggaccaggt 1072 ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1334 tggtggaattcgttaggagtggaatcagctccatcacttgttttcttgaagggaccaggt 1393 Query: 1073 gccaagcctgttgtataccatggaacttttagcaagtcagagttcacagagataatggag 1132 |||||||| ||||||||||||||||||||| |||||||||||| ||| ||||||||||| Sbjct: 1394 gccaagcccattgtataccatggaacttttaccaagtcagagtttacaaagataatggag 1453 Query: 1133 gagcacaagcaccaagaactccagcagctaagaagcgacacatctttggatcttggttgt 1192 ||||| |||||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 1454 gagcataagcaccaagaactcccacagctaagaagcgatacatctttggagctgggttgt 1513 Query: 1193 gatgctagaggtcattcacgcgctggaaaagaaatgatgatatggtactgtgtaatagct 1252 ||||| |||||| ||||||| |||||||| || || || ||||| |||||||| | | Sbjct: 1514 gatgccagaggttattcacgtgctggaaatgatatagcaatttggtattgtgtaattgtt 1573 Query: 1253 gcaggccgccctggtgtagaattaagtaaaaagagacaaattttgaggaaggcccaggac 1312 || || || |||||| |||| ||||||||| |||||| |||||| |||||||||| ||| Sbjct: 1574 gctggtcgtcctggtatagagctaagtaaaaggagacagattttgcggaaggcccaagac 1633 Query: 1313 caacta 1318 |||||| Sbjct: 1634 caacta 1639 Score = 468 bits (236), Expect = e-128 Identities = 488/572 (85%) Strand = Plus / Plus Query: 1366 ggtagcaagtgctgcaactgccttaaaagatgacaggcttacctttgtttggttggatgg 1425 |||| ||||||| || |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1690 ggtatcaagtgccgcggctgccttaaaagatgacaggttgacctttgtttggttggatgg 1749 Query: 1426 agaattacagaagaaactttgtgccttctaccttgccactgattaccatggagcctgtgg 1485 |||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 1750 agaagtgcagaagaaactttgtgccttctaccttgcaactgattacagtggagcctgtgg 1809 Query: 1486 tcctagaggctttgaagatgacaatgataagcctgaagtattcattgtccgtttccaaag 1545 |||| |||| |||| |||||| |||||||| ||||| | || ||||| ||||||||||| Sbjct: 1810 tcctggaggttttggagatgataatgataaatctgaactgtttattgttcgtttccaaag 1869 Query: 1546 aaatgcaacatatgaggcgttgaaagctgacaaaaagaataatcttatagagactctcca 1605 ||||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 1870 aaatgcaacatttgaggcgttgaaagctgagaaaacaaataatcttatggaggctctcca 1929 Query: 1606 gggacaggatattcctgatgcctcccagcttgtggctaggtataatggcccggatgaaat 1665 ||||| ||| |||||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 1930 aagacagcataccgctgatgcctcccagctagtggcaaggtataaaggcccggacgaaat 1989 Query: 1666 tctggagataaacaagtgggtctctcagattatcaaagatggagatactagagaaatccc 1725 |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| || Sbjct: 1990 agaggagataaacaaatggatctctcagattatcaaagatggagatactagggaaatacc 2049 Query: 1726 ttattttacttcaaaggtaccggatcttttacccgaggaaacaagtaaagaatggttaag 1785 ||| ||||||||||||||||| |||||| | || |||||||||||||| |||||| ||| Sbjct: 2050 ttactttacttcaaaggtaccagatcttgtgcctgaggaaacaagtaaggaatggataaa 2109 Query: 1786 tggtaccaaaagcatccgctcggccgggaaaagtttaaaagagagggttcagaacagtgg 1845 |||||||||| |||||||| || || || ||| ||||| ||||| | |||| |||||| Sbjct: 2110 aagtaccaaaagtatccgctcagcaggaaacagtgtaaaacagaggatccagagcagtgg 2169 Query: 1846 cttcagtttcagtgattacttaacagacccaagggttggtccagctttgctgatgcttgc 1905 || |||| | |||||| | || ||||||||| | || ||||||||||| ||| ||| Sbjct: 2170 atttcatttcggagattacctgactgacccaaggatcggcccagctttgcttatgtctgc 2229 Query: 1906 gtgcatttcatggggaacaatatggttcaaga 1937 ||||||||| ||||| |||||||| ||||| Sbjct: 2230 atgcatttcaatgggaataatatggtacaaga 2261 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 2052 ctgatcctgagcccaaagatgctcgtgagtgggagat 2088 |||||||||| ||||||||||||||| |||||||||| Sbjct: 2382 ctgatcctgaacccaaagatgctcgtcagtgggagat 2418
>dbj|AK058943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-H08, full insert sequence Length = 956 Score = 452 bits (228), Expect = e-123 Identities = 468/548 (85%) Strand = Plus / Plus Query: 1390 aaaagatgacaggcttacctttgtttggttggatggagaattacagaagaaactttgtgc 1449 ||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 1 aaaagatgacaggttgacctttgtttggttggatggagaagtgcagaagaaactttgtgc 60 Query: 1450 cttctaccttgccactgattaccatggagcctgtggtcctagaggctttgaagatgacaa 1509 |||||||||||| ||||||||| |||||||||||||||| |||| |||| |||||| || Sbjct: 61 cttctaccttgcaactgattacagtggagcctgtggtcctggaggttttggagatgataa 120 Query: 1510 tgataagcctgaagtattcattgtccgtttccaaagaaatgcaacatatgaggcgttgaa 1569 |||||| ||||| | || ||||| |||||||||||||||||||||| |||||||||||| Sbjct: 121 tgataaatctgaactgtttattgttcgtttccaaagaaatgcaacatttgaggcgttgaa 180 Query: 1570 agctgacaaaaagaataatcttatagagactctccagggacaggatattcctgatgcctc 1629 |||||| |||| ||||||||||| ||| ||||||| ||||| ||| |||||||||| Sbjct: 181 agctgagaaaacaaataatcttatggaggctctccaaagacagcataccgctgatgcctc 240 Query: 1630 ccagcttgtggctaggtataatggcccggatgaaattctggagataaacaagtgggtctc 1689 |||||| ||||| |||||||| |||||||| ||||| |||||||||||| ||| |||| Sbjct: 241 ccagctagtggcaaggtataaaggcccggacgaaatagaggagataaacaaatggatctc 300 Query: 1690 tcagattatcaaagatggagatactagagaaatcccttattttacttcaaaggtaccgga 1749 ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| || Sbjct: 301 tcagattatcaaagatggagatactagggaaataccttactttacttcaaaggtaccaga 360 Query: 1750 tcttttacccgaggaaacaagtaaagaatggttaagtggtaccaaaagcatccgctcggc 1809 |||| | || |||||||||||||| |||||| ||| |||||||||| |||||||| || Sbjct: 361 tcttgtgcctgaggaaacaagtaaggaatggataaaaagtaccaaaagtatccgctcagc 420 Query: 1810 cgggaaaagtttaaaagagagggttcagaacagtggcttcagtttcagtgattacttaac 1869 || || ||| ||||| ||||| | |||| |||||| || |||| | |||||| | || Sbjct: 421 aggaaacagtgtaaaacagaggatccagagcagtggatttcatttcggagattacctgac 480 Query: 1870 agacccaagggttggtccagctttgctgatgcttgcgtgcatttcatggggaacaatatg 1929 ||||||||| | || ||||||||||| ||| ||| ||||||||| ||||| |||||| Sbjct: 481 tgacccaaggatcggcccagctttgcttatgtctgcatgcatttcaatgggaataatatg 540 Query: 1930 gttcaaga 1937 || ||||| Sbjct: 541 gtacaaga 548 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 2052 ctgatcctgagcccaaagatgctcgtgagtgggagat 2088 |||||||||| ||||||||||||||| |||||||||| Sbjct: 669 ctgatcctgaacccaaagatgctcgtcagtgggagat 705
>gb|BT017197.1| Zea mays clone EL01N0371D11.c mRNA sequence Length = 1492 Score = 234 bits (118), Expect = 1e-57 Identities = 211/242 (87%) Strand = Plus / Plus Query: 1371 caagtgctgcaactgccttaaaagatgacaggcttacctttgtttggttggatggagaat 1430 ||||||||||||||||||| |||||||| ||| | |||||||||||||| ||||||||| Sbjct: 348 caagtgctgcaactgccttcaaagatgataggttaacctttgtttggttagatggagaag 407 Query: 1431 tacagaagaaactttgtgccttctaccttgccactgattaccatggagcctgtggtccta 1490 |||| ||| || |||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 408 tacaaaagcaaatttgtgccttctaccttgccactgattatactggagcctgtggccctc 467 Query: 1491 gaggctttgaagatgacaatgataagcctgaagtattcattgtccgtttccaaagaaatg 1550 ||| ||||| ||||||||||||||| |||||| | || ||||| || ||||||||||||| Sbjct: 468 gagactttggagatgacaatgataaacctgaaatttttattgttcgattccaaagaaatg 527 Query: 1551 caacatatgaggcgttgaaagctgacaaaaagaataatcttatagagactctccagggac 1610 ||||||||||||| |||||||||| |||||||| |||||| | || ||||||||||| Sbjct: 528 caacatatgaggcactgaaagctgaaaaaaagaacaatcttgtggatgttctccagggac 587 Query: 1611 ag 1612 || Sbjct: 588 ag 589 Score = 210 bits (106), Expect = 2e-50 Identities = 229/270 (84%) Strand = Plus / Plus Query: 1036 atcggctcctgcacttgttttcttgaagggaccaggtgccaagcctgttgtataccatgg 1095 ||||||||| |||||||||||||||||||| ||||| | | |||| ||||| ||||||| Sbjct: 13 atcggctccagcacttgttttcttgaaggggccaggcacaacgccttttgtacaccatgg 72 Query: 1096 aacttttagcaagtcagagttcacagagataatggaggagcacaagcaccaagaactcca 1155 | |||||||||||||||||||| |||||| |||||||||||||||||||| ||||| | Sbjct: 73 attttttagcaagtcagagttcatagagatgatggaggagcacaagcaccatgaactgcg 132 Query: 1156 gcagctaagaagcgacacatctttggatcttggttgtgatgctagaggtcattcacgcgc 1215 ||||||||||| |||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 133 acagctaagaagtgacacatctttggaactgggttgtgatgctagaggtcattcacgtgc 192 Query: 1216 tggaaaagaaatgatgatatggtactgtgtaatagctgcaggccgccctggtgtagaatt 1275 ||| || || || ||||| |||||||| | ||| || || || |||| |||||| Sbjct: 193 tggcaatgatgcagcaatttggtattgtgtaattgttgctggtcgtccaggtgcagaatt 252 Query: 1276 aagtaaaaagagacaaattttgaggaaggc 1305 ||| || ||||||||||||||| ||||||| Sbjct: 253 aagcaagaagagacaaattttgcggaaggc 282 Score = 133 bits (67), Expect = 3e-27 Identities = 100/111 (90%) Strand = Plus / Plus Query: 1670 gagataaacaagtgggtctctcagattatcaaagatggagatactagagaaatcccttat 1729 |||||||| | |||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 646 gagataaataggtggatctctcagattatcaaagatggagatactagagaaattccttac 705 Query: 1730 tttacttcaaaggtaccggatcttttacccgaggaaacaagtaaagaatgg 1780 |||||||||||||| || |||||| |||| ||||||||||| |||| |||| Sbjct: 706 tttacttcaaaggtgccagatcttgtaccagaggaaacaagcaaagcatgg 756
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 224 bits (113), Expect = 1e-54 Identities = 200/229 (87%) Strand = Plus / Plus Query: 1437 agaaactttgtgccttctaccttgccactgattaccatggagcctgtggtcctagaggct 1496 ||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| | Sbjct: 26185082 agaaactttgtgccttctaccttgcaactgattacagtggagcctgtggtcctggaggtt 26185141 Query: 1497 ttgaagatgacaatgataagcctgaagtattcattgtccgtttccaaagaaatgcaacat 1556 ||| |||||| |||||||| ||||| | || ||||| |||||||||||||||||||||| Sbjct: 26185142 ttggagatgataatgataaatctgaactgtttattgttcgtttccaaagaaatgcaacat 26185201 Query: 1557 atgaggcgttgaaagctgacaaaaagaataatcttatagagactctccagggacaggata 1616 |||||||||||||||||| |||| ||||||||||| ||| ||||||| ||||| ||| Sbjct: 26185202 ttgaggcgttgaaagctgagaaaacaaataatcttatggaggctctccaaagacagcata 26185261 Query: 1617 ttcctgatgcctcccagcttgtggctaggtataatggcccggatgaaat 1665 |||||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 26185262 ccgctgatgcctcccagctagtggcaaggtataaaggcccggacgaaat 26185310 Score = 180 bits (91), Expect = 2e-41 Identities = 127/139 (91%) Strand = Plus / Plus Query: 885 aggtgaaggctatctttttctcaagcaccggggagcgtgcggctccatttcttcgccaag 944 |||| |||| ||||||||||||||| |||||||| ||||| |||||||| |||||||||| Sbjct: 26182834 aggtcaaggttatctttttctcaagtaccggggaacgtgctgctccattccttcgccaag 26182893 Query: 945 ctgcccaagagtattcgagctatgcatcgtttgcatttgtcctatggaaagaagaggaat 1004 |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| |||| Sbjct: 26182894 ctgcccaagagtattcgacctatgcatcatttgcatttgtcttatggaaagaagatgaat 26182953 Query: 1005 cccagatctggtggaattc 1023 | ||||| ||||||||||| Sbjct: 26182954 ctcagatttggtggaattc 26182972 Score = 149 bits (75), Expect = 6e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 53 atggcgattccggaggaggtgcgccgctactggctgccgatcctcctcgccgccggcggc 112 ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 26178533 atggcgattccggcggaggtgcgccgctactggctgcccatcctcctcgccgccgtcggg 26178592 Query: 113 ttcctcttccagctcctcgtcctgcccaaatcatttccgccctcccactac 163 |||||||||||||||||||||||||||| || || |||||| |||||||| Sbjct: 26178593 ttcctcttccagctcctcgtcctgcccatctccttcccgcccacccactac 26178643 Score = 111 bits (56), Expect = 1e-20 Identities = 86/96 (89%) Strand = Plus / Plus Query: 752 aggtacccaggtgagctaactgtggattctgttgtcaactgggttgcatcgtcaattgtt 811 ||||||||||||||||| ||||||||||||||| ||||||| ||| ||||| ||||| Sbjct: 26182003 aggtacccaggtgagctttttgtggattctgttgttgactgggtggcaacgtcagttgtt 26182062 Query: 812 ggtttacctcggatcttgtactattcaaaggagaca 847 ||||||||||| |||||||||||||| ||||||||| Sbjct: 26182063 ggtttacctcgtatcttgtactattccaaggagaca 26182098 Score = 101 bits (51), Expect = 1e-17 Identities = 66/71 (92%) Strand = Plus / Plus Query: 1025 ttaggagtggaatcggctcctgcacttgttttcttgaagggaccaggtgccaagcctgtt 1084 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| || Sbjct: 26183834 ttaggagtggaatcagctccatcacttgttttcttgaagggaccaggtgccaagcccatt 26183893 Query: 1085 gtataccatgg 1095 ||||||||||| Sbjct: 26183894 gtataccatgg 26183904 Score = 97.6 bits (49), Expect = 2e-16 Identities = 166/205 (80%) Strand = Plus / Plus Query: 1733 acttcaaaggtaccggatcttttacccgaggaaacaagtaaagaatggttaagtggtacc 1792 |||||||||||||| |||||| | || |||||||||||||| |||||| ||| ||||| Sbjct: 26185974 acttcaaaggtaccagatcttgtgcctgaggaaacaagtaaggaatggataaaaagtacc 26186033 Query: 1793 aaaagcatccgctcggccgggaaaagtttaaaagagagggttcagaacagtggcttcagt 1852 ||||| |||||||| || || || ||| ||||| ||||| | |||| |||||| || | Sbjct: 26186034 aaaagtatccgctcagcaggaaacagtgtaaaacagaggatccagagcagtggatttcat 26186093 Query: 1853 ttcagtgattacttaacagacccaagggttggtccagctttgctgatgcttgcgtgcatt 1912 ||| | |||||| | || ||||||||| | || ||||||||||| ||| ||| |||||| Sbjct: 26186094 ttcggagattacctgactgacccaaggatcggcccagctttgcttatgtctgcatgcatt 26186153 Query: 1913 tcatggggaacaatatggttcaaga 1937 ||| ||||| |||||||| ||||| Sbjct: 26186154 tcaatgggaataatatggtacaaga 26186178 Score = 91.7 bits (46), Expect = 1e-14 Identities = 70/78 (89%) Strand = Plus / Plus Query: 279 agatccgttatgcgtatgagttgttgacaaatccagttttgaagcgggactatgatcttt 338 |||| |||||||| |||||| |||||||||||||| ||||||| |||| |||||||||| Sbjct: 26179886 agattcgttatgcatatgagctgttgacaaatccaattttgaaaagggattatgatcttt 26179945 Query: 339 ttggtctggatcatcata 356 |||||||||| ||||||| Sbjct: 26179946 ttggtctggaccatcata 26179963 Score = 89.7 bits (45), Expect = 5e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 590 cgactggatggcgtggccaacactgctatggtagaacttggtgatacacgactggcaggg 649 ||||||||||| || || ||||||||||||||||||||||||||| | |||| | || Sbjct: 26181263 cgactggatggtgtagcaaacactgctatggtagaacttggtgatgtgcaactgactggt 26181322 Query: 650 tattttgcagaaaaaaggttctctcagcagccatttttccg 690 ||||||||||| ||||||||||| | |||||||||||||| Sbjct: 26181323 cattttgcagaacaaaggttctctaaacagccatttttccg 26181363 Score = 87.7 bits (44), Expect = 2e-13 Identities = 119/144 (82%) Strand = Plus / Plus Query: 1147 agaactccagcagctaagaagcgacacatctttggatcttggttgtgatgctagaggtca 1206 |||||||| |||||||||||||| ||||||||||| || ||||||||||| |||||| | Sbjct: 26184157 agaactcccacagctaagaagcgatacatctttggagctgggttgtgatgccagaggtta 26184216 Query: 1207 ttcacgcgctggaaaagaaatgatgatatggtactgtgtaatagctgcaggccgccctgg 1266 |||||| |||||||| || || || ||||| |||||||| | ||| || || ||||| Sbjct: 26184217 ttcacgtgctggaaatgatatagcaatttggtattgtgtaattgttgctggtcgtcctgg 26184276 Query: 1267 tgtagaattaagtaaaaagagaca 1290 | |||| ||||||||| |||||| Sbjct: 26184277 tatagagctaagtaaaaggagaca 26184300 Score = 83.8 bits (42), Expect = 3e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 1671 agataaacaagtgggtctctcagattatcaaagatggagatactagagaaatccctta 1728 |||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 26185448 agataaacaaatggatctctcagattatcaaagatggagatactagggaaatacctta 26185505 Score = 81.8 bits (41), Expect = 1e-11 Identities = 65/73 (89%) Strand = Plus / Plus Query: 1366 ggtagcaagtgctgcaactgccttaaaagatgacaggcttacctttgtttggttggatgg 1425 |||| ||||||| || |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 26184488 ggtatcaagtgccgcggctgccttaaaagatgacaggttgacctttgtttggttggatgg 26184547 Query: 1426 agaattacagaag 1438 |||| | |||||| Sbjct: 26184548 agaagtgcagaag 26184560 Score = 77.8 bits (39), Expect = 2e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 1094 ggaacttttagcaagtcagagttcacagagataatggaggagcacaagcaccaag 1148 |||||||||| |||||||||||| ||| |||||||||||||||| |||||||||| Sbjct: 26183992 ggaacttttaccaagtcagagtttacaaagataatggaggagcataagcaccaag 26184046 Score = 71.9 bits (36), Expect = 1e-08 Identities = 69/80 (86%) Strand = Plus / Plus Query: 358 ggatgtcctcgagagtgtcaaagaacaatatcaaagggagcactttctgaaaatagatct 417 ||||||||| |||| ||||||||||| ||||||| ||| |||||| ||||||||||||| Sbjct: 26180102 ggatgtccttgagaaagtcaaagaacagtatcaaaaggaacactttttgaaaatagatct 26180161 Query: 418 acccattttaaaagattctt 437 ||| | ||||| ||||||| Sbjct: 26180162 ccccttgttaaaggattctt 26180181 Score = 69.9 bits (35), Expect = 4e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 705 ctcttgttgcatatcctgctaactgcagaagtccatcctgttatatgaggt 755 ||||||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 26181778 ctcttgttgcataccctgcagactgcagaagtccatcctgttacatgaggt 26181828 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 2052 ctgatcctgagcccaaagatgctcgtgagtgggagat 2088 |||||||||| ||||||||||||||| |||||||||| Sbjct: 26186923 ctgatcctgaacccaaagatgctcgtcagtgggagat 26186959 Score = 50.1 bits (25), Expect = 0.039 Identities = 46/53 (86%) Strand = Plus / Plus Query: 530 tattcaaaggggagtcctcgctgcgctcaattttttgagtattggaagcaaat 582 ||||||||||| |||||||| || ||||||||| |||| | ||||||||||| Sbjct: 26180492 tattcaaagggtagtcctcggtgtgctcaatttattgaaaaatggaagcaaat 26180544
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 224 bits (113), Expect = 1e-54 Identities = 200/229 (87%) Strand = Plus / Plus Query: 1437 agaaactttgtgccttctaccttgccactgattaccatggagcctgtggtcctagaggct 1496 ||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| | Sbjct: 76940 agaaactttgtgccttctaccttgcaactgattacagtggagcctgtggtcctggaggtt 76999 Query: 1497 ttgaagatgacaatgataagcctgaagtattcattgtccgtttccaaagaaatgcaacat 1556 ||| |||||| |||||||| ||||| | || ||||| |||||||||||||||||||||| Sbjct: 77000 ttggagatgataatgataaatctgaactgtttattgttcgtttccaaagaaatgcaacat 77059 Query: 1557 atgaggcgttgaaagctgacaaaaagaataatcttatagagactctccagggacaggata 1616 |||||||||||||||||| |||| ||||||||||| ||| ||||||| ||||| ||| Sbjct: 77060 ttgaggcgttgaaagctgagaaaacaaataatcttatggaggctctccaaagacagcata 77119 Query: 1617 ttcctgatgcctcccagcttgtggctaggtataatggcccggatgaaat 1665 |||||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 77120 ccgctgatgcctcccagctagtggcaaggtataaaggcccggacgaaat 77168 Score = 180 bits (91), Expect = 2e-41 Identities = 127/139 (91%) Strand = Plus / Plus Query: 885 aggtgaaggctatctttttctcaagcaccggggagcgtgcggctccatttcttcgccaag 944 |||| |||| ||||||||||||||| |||||||| ||||| |||||||| |||||||||| Sbjct: 74692 aggtcaaggttatctttttctcaagtaccggggaacgtgctgctccattccttcgccaag 74751 Query: 945 ctgcccaagagtattcgagctatgcatcgtttgcatttgtcctatggaaagaagaggaat 1004 |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| |||| Sbjct: 74752 ctgcccaagagtattcgacctatgcatcatttgcatttgtcttatggaaagaagatgaat 74811 Query: 1005 cccagatctggtggaattc 1023 | ||||| ||||||||||| Sbjct: 74812 ctcagatttggtggaattc 74830 Score = 149 bits (75), Expect = 6e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 53 atggcgattccggaggaggtgcgccgctactggctgccgatcctcctcgccgccggcggc 112 ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 70391 atggcgattccggcggaggtgcgccgctactggctgcccatcctcctcgccgccgtcggg 70450 Query: 113 ttcctcttccagctcctcgtcctgcccaaatcatttccgccctcccactac 163 |||||||||||||||||||||||||||| || || |||||| |||||||| Sbjct: 70451 ttcctcttccagctcctcgtcctgcccatctccttcccgcccacccactac 70501 Score = 111 bits (56), Expect = 1e-20 Identities = 86/96 (89%) Strand = Plus / Plus Query: 752 aggtacccaggtgagctaactgtggattctgttgtcaactgggttgcatcgtcaattgtt 811 ||||||||||||||||| ||||||||||||||| ||||||| ||| ||||| ||||| Sbjct: 73861 aggtacccaggtgagctttttgtggattctgttgttgactgggtggcaacgtcagttgtt 73920 Query: 812 ggtttacctcggatcttgtactattcaaaggagaca 847 ||||||||||| |||||||||||||| ||||||||| Sbjct: 73921 ggtttacctcgtatcttgtactattccaaggagaca 73956 Score = 101 bits (51), Expect = 1e-17 Identities = 66/71 (92%) Strand = Plus / Plus Query: 1025 ttaggagtggaatcggctcctgcacttgttttcttgaagggaccaggtgccaagcctgtt 1084 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| || Sbjct: 75692 ttaggagtggaatcagctccatcacttgttttcttgaagggaccaggtgccaagcccatt 75751 Query: 1085 gtataccatgg 1095 ||||||||||| Sbjct: 75752 gtataccatgg 75762 Score = 97.6 bits (49), Expect = 2e-16 Identities = 166/205 (80%) Strand = Plus / Plus Query: 1733 acttcaaaggtaccggatcttttacccgaggaaacaagtaaagaatggttaagtggtacc 1792 |||||||||||||| |||||| | || |||||||||||||| |||||| ||| ||||| Sbjct: 77832 acttcaaaggtaccagatcttgtgcctgaggaaacaagtaaggaatggataaaaagtacc 77891 Query: 1793 aaaagcatccgctcggccgggaaaagtttaaaagagagggttcagaacagtggcttcagt 1852 ||||| |||||||| || || || ||| ||||| ||||| | |||| |||||| || | Sbjct: 77892 aaaagtatccgctcagcaggaaacagtgtaaaacagaggatccagagcagtggatttcat 77951 Query: 1853 ttcagtgattacttaacagacccaagggttggtccagctttgctgatgcttgcgtgcatt 1912 ||| | |||||| | || ||||||||| | || ||||||||||| ||| ||| |||||| Sbjct: 77952 ttcggagattacctgactgacccaaggatcggcccagctttgcttatgtctgcatgcatt 78011 Query: 1913 tcatggggaacaatatggttcaaga 1937 ||| ||||| |||||||| ||||| Sbjct: 78012 tcaatgggaataatatggtacaaga 78036 Score = 91.7 bits (46), Expect = 1e-14 Identities = 70/78 (89%) Strand = Plus / Plus Query: 279 agatccgttatgcgtatgagttgttgacaaatccagttttgaagcgggactatgatcttt 338 |||| |||||||| |||||| |||||||||||||| ||||||| |||| |||||||||| Sbjct: 71744 agattcgttatgcatatgagctgttgacaaatccaattttgaaaagggattatgatcttt 71803 Query: 339 ttggtctggatcatcata 356 |||||||||| ||||||| Sbjct: 71804 ttggtctggaccatcata 71821 Score = 89.7 bits (45), Expect = 5e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 590 cgactggatggcgtggccaacactgctatggtagaacttggtgatacacgactggcaggg 649 ||||||||||| || || ||||||||||||||||||||||||||| | |||| | || Sbjct: 73121 cgactggatggtgtagcaaacactgctatggtagaacttggtgatgtgcaactgactggt 73180 Query: 650 tattttgcagaaaaaaggttctctcagcagccatttttccg 690 ||||||||||| ||||||||||| | |||||||||||||| Sbjct: 73181 cattttgcagaacaaaggttctctaaacagccatttttccg 73221 Score = 87.7 bits (44), Expect = 2e-13 Identities = 119/144 (82%) Strand = Plus / Plus Query: 1147 agaactccagcagctaagaagcgacacatctttggatcttggttgtgatgctagaggtca 1206 |||||||| |||||||||||||| ||||||||||| || ||||||||||| |||||| | Sbjct: 76015 agaactcccacagctaagaagcgatacatctttggagctgggttgtgatgccagaggtta 76074 Query: 1207 ttcacgcgctggaaaagaaatgatgatatggtactgtgtaatagctgcaggccgccctgg 1266 |||||| |||||||| || || || ||||| |||||||| | ||| || || ||||| Sbjct: 76075 ttcacgtgctggaaatgatatagcaatttggtattgtgtaattgttgctggtcgtcctgg 76134 Query: 1267 tgtagaattaagtaaaaagagaca 1290 | |||| ||||||||| |||||| Sbjct: 76135 tatagagctaagtaaaaggagaca 76158 Score = 83.8 bits (42), Expect = 3e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 1671 agataaacaagtgggtctctcagattatcaaagatggagatactagagaaatccctta 1728 |||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 77306 agataaacaaatggatctctcagattatcaaagatggagatactagggaaatacctta 77363 Score = 81.8 bits (41), Expect = 1e-11 Identities = 65/73 (89%) Strand = Plus / Plus Query: 1366 ggtagcaagtgctgcaactgccttaaaagatgacaggcttacctttgtttggttggatgg 1425 |||| ||||||| || |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 76346 ggtatcaagtgccgcggctgccttaaaagatgacaggttgacctttgtttggttggatgg 76405 Query: 1426 agaattacagaag 1438 |||| | |||||| Sbjct: 76406 agaagtgcagaag 76418 Score = 77.8 bits (39), Expect = 2e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 1094 ggaacttttagcaagtcagagttcacagagataatggaggagcacaagcaccaag 1148 |||||||||| |||||||||||| ||| |||||||||||||||| |||||||||| Sbjct: 75850 ggaacttttaccaagtcagagtttacaaagataatggaggagcataagcaccaag 75904 Score = 71.9 bits (36), Expect = 1e-08 Identities = 69/80 (86%) Strand = Plus / Plus Query: 358 ggatgtcctcgagagtgtcaaagaacaatatcaaagggagcactttctgaaaatagatct 417 ||||||||| |||| ||||||||||| ||||||| ||| |||||| ||||||||||||| Sbjct: 71960 ggatgtccttgagaaagtcaaagaacagtatcaaaaggaacactttttgaaaatagatct 72019 Query: 418 acccattttaaaagattctt 437 ||| | ||||| ||||||| Sbjct: 72020 ccccttgttaaaggattctt 72039 Score = 69.9 bits (35), Expect = 4e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 705 ctcttgttgcatatcctgctaactgcagaagtccatcctgttatatgaggt 755 ||||||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 73636 ctcttgttgcataccctgcagactgcagaagtccatcctgttacatgaggt 73686 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 2052 ctgatcctgagcccaaagatgctcgtgagtgggagat 2088 |||||||||| ||||||||||||||| |||||||||| Sbjct: 78781 ctgatcctgaacccaaagatgctcgtcagtgggagat 78817 Score = 50.1 bits (25), Expect = 0.039 Identities = 46/53 (86%) Strand = Plus / Plus Query: 530 tattcaaaggggagtcctcgctgcgctcaattttttgagtattggaagcaaat 582 ||||||||||| |||||||| || ||||||||| |||| | ||||||||||| Sbjct: 72350 tattcaaagggtagtcctcggtgtgctcaatttattgaaaaatggaagcaaat 72402
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Minus Query: 112 cttcctcttccagctcctcgtcct 135 |||||||||||||||||||||||| Sbjct: 132896 cttcctcttccagctcctcgtcct 132873
>ref|NW_001091928.1| Theileria annulata strain Ankara clone C9 Length = 1842271 Score = 46.1 bits (23), Expect = 0.61 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 ttttaaaagattctttaattcaa 445 ||||||||||||||||||||||| Sbjct: 821782 ttttaaaagattctttaattcaa 821804
>ref|XM_947983.1| Theileria annulata strain Ankara hypothetical protein (TA08302) partial mRNA Length = 660 Score = 46.1 bits (23), Expect = 0.61 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 ttttaaaagattctttaattcaa 445 ||||||||||||||||||||||| Sbjct: 572 ttttaaaagattctttaattcaa 594
>emb|BX957317.12| Zebrafish DNA sequence from clone DKEY-150K17 in linkage group 19, complete sequence Length = 222684 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 cggcggcttcctcttccagctc 127 |||||||||||||||||||||| Sbjct: 60450 cggcggcttcctcttccagctc 60471
>dbj|AP003062.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-555G19, complete sequence Length = 171428 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 523 actggtttattcaaaggggagt 544 |||||||||||||||||||||| Sbjct: 122558 actggtttattcaaaggggagt 122537
>gb|AC127537.8| Homo sapiens chromosome 17, clone RP1-178F10, complete sequence Length = 131300 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1616 attcctgatgcctcccagctt 1636 ||||||||||||||||||||| Sbjct: 7603 attcctgatgcctcccagctt 7623
>ref|NM_001058115.1| Oryza sativa (japonica cultivar-group) Os03g0799900 (Os03g0799900) mRNA, complete cds Length = 2660 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cgccgctactggctgccgatc 94 ||||||||||||||||||||| Sbjct: 137 cgccgctactggctgccgatc 157
>emb|AM180355.1| Clostridium difficile 630 complete genome Length = 4290252 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 cccattttaaaagattcttta 439 ||||||||||||||||||||| Sbjct: 422682 cccattttaaaagattcttta 422662
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tcctcttccagctcctcgtcc 134 ||||||||||||||||||||| Sbjct: 1921755 tcctcttccagctcctcgtcc 1921735
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 gatcctcctcgccgccggcgg 111 ||||||||||||||||||||| Sbjct: 7021562 gatcctcctcgccgccggcgg 7021542
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2040 ctgaaaccggcactgatcctg 2060 ||||||||||||||||||||| Sbjct: 1962339 ctgaaaccggcactgatcctg 1962319
>gb|AC183991.2| Pan troglodytes BAC clone CH251-80D2 from chromosome 2, complete sequence Length = 152207 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1271 gaattaagtaaaaagagacaa 1291 ||||||||||||||||||||| Sbjct: 2709 gaattaagtaaaaagagacaa 2689
>gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome 12, complete sequence Length = 239046 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1972 agcccctaaagacaggactaa 1992 ||||||||||||||||||||| Sbjct: 89411 agcccctaaagacaggactaa 89391
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 cccattttaaaagattcttta 439 ||||||||||||||||||||| Sbjct: 18613 cccattttaaaagattcttta 18633
>gb|AF046784.1| Macaca mulatta Mamu IgM-rh heavy chain (Mamu IGHM-rh) mRNA, partial cds Length = 1418 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2318 gttagagttgttcttgaattt 2338 ||||||||||||||||||||| Sbjct: 147 gttagagttgttcttgaattt 127
>gb|AC138715.3| Mus musculus BAC clone RP23-283E23 from chromosome 15, complete sequence Length = 164806 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2250 ttttggcctggtttcatccat 2270 ||||||||||||||||||||| Sbjct: 112010 ttttggcctggtttcatccat 111990
>ref|NM_139419.1| Drosophila melanogaster CG13925-RA (CG13925), mRNA Length = 543 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tcctcttccagctcctcgtcc 134 ||||||||||||||||||||| Sbjct: 341 tcctcttccagctcctcgtcc 321
>gb|AC113518.9| Mus musculus chromosome 1, clone RP23-477L7, complete sequence Length = 194281 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 465 atgtactcacatatgaggcat 485 ||||||||||||||||||||| Sbjct: 69675 atgtactcacatatgaggcat 69655
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 tcctcgccgccggcggcttcc 116 ||||||||||||||||||||| Sbjct: 570405 tcctcgccgccggcggcttcc 570385
>gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome 1, complete sequence Length = 235490 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 atgtactcacatatgaggcat 485 ||||||||||||||||||||| Sbjct: 42204 atgtactcacatatgaggcat 42224
>dbj|AK139133.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730041O18 product:fucosyltransferase 9, full insert sequence Length = 3797 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 tttaaaagattctttaattca 444 ||||||||||||||||||||| Sbjct: 2467 tttaaaagattctttaattca 2447
>gb|AC100805.2| Homo sapiens chromosome 8, clone CTC-789J18, complete sequence Length = 155955 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1572 ctgacaaaaagaataatctta 1592 ||||||||||||||||||||| Sbjct: 150981 ctgacaaaaagaataatctta 150961
>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194006 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tcctcttccagctcctcgtcc 134 ||||||||||||||||||||| Sbjct: 147969 tcctcttccagctcctcgtcc 147989
>gb|AC109515.6| Homo sapiens chromosome 17, clone CTD-2503K16, complete sequence Length = 144448 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1616 attcctgatgcctcccagctt 1636 ||||||||||||||||||||| Sbjct: 6263 attcctgatgcctcccagctt 6243
>dbj|AK049167.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330009O11 product:hypothetical protein, full insert sequence Length = 1861 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 tttaaaagattctttaattca 444 ||||||||||||||||||||| Sbjct: 1857 tttaaaagattctttaattca 1837
>ref|XM_643104.1| Entamoeba histolytica HM-1:IMSS DNA polymerase (520.t00002) partial mRNA Length = 3651 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 attttaaaagattctttaatt 442 ||||||||||||||||||||| Sbjct: 2006 attttaaaagattctttaatt 2026
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 cccattttaaaagattcttta 439 ||||||||||||||||||||| Sbjct: 3389131 cccattttaaaagattcttta 3389151
>gb|AC139053.15| Mus musculus chromosome 1, clone RP23-2I19, complete sequence Length = 232850 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 831 actattcaaaggagacactgg 851 ||||||||||||||||||||| Sbjct: 131230 actattcaaaggagacactgg 131210
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cgccgctactggctgccgatc 94 ||||||||||||||||||||| Sbjct: 33133037 cgccgctactggctgccgatc 33133057
>emb|AL451130.8| Human DNA sequence from clone RP11-10G21 on chromosome 9, complete sequence Length = 100228 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1815 aaagtttaaaagagagggttc 1835 ||||||||||||||||||||| Sbjct: 73374 aaagtttaaaagagagggttc 73394
>emb|AL365227.19| Human DNA sequence from clone RP3-422A11 on chromosome 6, complete sequence Length = 100477 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2325 ttgttcttgaatttatgtttg 2345 ||||||||||||||||||||| Sbjct: 18695 ttgttcttgaatttatgtttg 18675
>gb|AC022915.14| Homo sapiens chromosome 8, clone RP11-770E5, complete sequence Length = 188408 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1572 ctgacaaaaagaataatctta 1592 ||||||||||||||||||||| Sbjct: 156133 ctgacaaaaagaataatctta 156153
>gb|AC020915.6|AC020915 Homo sapiens chromosome 19 clone CTD-3138B18, complete sequence Length = 160852 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1352 gaaattttagtacaggtagca 1372 ||||||||||||||||||||| Sbjct: 129096 gaaattttagtacaggtagca 129076
>gb|AC024595.5| Homo sapiens BAC clone RP11-84N19 from 4, complete sequence Length = 166394 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 561 tttttgagtattggaagcaaattga 585 ||||||| ||||||||||||||||| Sbjct: 41904 tttttgattattggaagcaaattga 41880
>gb|AC010105.12| Homo sapiens BAC clone RP11-563E24 from 2, complete sequence Length = 193320 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1330 tgatgaaagtactggcaattt 1350 ||||||||||||||||||||| Sbjct: 120298 tgatgaaagtactggcaattt 120318
>gb|AC087231.1|AC087231 Caenorhabditis briggsae cosmid CB034P13, complete sequence Length = 71462 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 773 gtggattctgttgtcaactgg 793 ||||||||||||||||||||| Sbjct: 37341 gtggattctgttgtcaactgg 37361
>gb|AC009237.3| Homo sapiens BAC clone RP11-440D17 from 2, complete sequence Length = 170102 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1271 gaattaagtaaaaagagacaa 1291 ||||||||||||||||||||| Sbjct: 96699 gaattaagtaaaaagagacaa 96719
>gb|AC062029.7| Homo sapiens BAC clone RP11-450E9 from 2, complete sequence Length = 129832 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1342 tggcaatttggaaattttagt 1362 ||||||||||||||||||||| Sbjct: 64650 tggcaatttggaaattttagt 64670
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 cgccgctactggctgccgatc 94 ||||||||||||||||||||| Sbjct: 80781 cgccgctactggctgccgatc 80761
>dbj|AK111711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024A21, full insert sequence Length = 2659 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cgccgctactggctgccgatc 94 ||||||||||||||||||||| Sbjct: 136 cgccgctactggctgccgatc 156
>gb|AC099736.10| Mus musculus chromosome 15, clone RP23-228F5, complete sequence Length = 186137 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2250 ttttggcctggtttcatccat 2270 ||||||||||||||||||||| Sbjct: 177844 ttttggcctggtttcatccat 177864
>gb|AC118684.9| Mus musculus chromosome 17, clone RP23-414B17, complete sequence Length = 202561 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 755 tacccaggtgagctaactgtg 775 ||||||||||||||||||||| Sbjct: 117437 tacccaggtgagctaactgtg 117457
>gb|AY107725.1| Zea mays PCO106440 mRNA sequence Length = 1176 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cctcctcgccgccggcggcttcctc 118 |||||||| |||||||||||||||| Sbjct: 305 cctcctcggcgccggcggcttcctc 281
>gb|AC154870.4| Monodelphis domestica, clone XX-218A9, complete sequence Length = 133508 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 aaatagatctacccattttaa 428 ||||||||||||||||||||| Sbjct: 45672 aaatagatctacccattttaa 45692
>emb|AL954321.8| Mouse DNA sequence from clone RP23-407M22 on chromosome 4, complete sequence Length = 65324 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 tttaaaagattctttaattca 444 ||||||||||||||||||||| Sbjct: 24939 tttaaaagattctttaattca 24959
>gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, region 62B8-62B11, P1 clone DS04710, complete sequence Length = 72327 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tcctcttccagctcctcgtcc 134 ||||||||||||||||||||| Sbjct: 55450 tcctcttccagctcctcgtcc 55430
>emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1, COMPLETE SEQUENCE Length = 122965 Score = 42.1 bits (21), Expect = 9.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ttgttgacaaatccagttttgaagc 323 ||||||||||||||| ||||||||| Sbjct: 52486 ttgttgacaaatccatttttgaagc 52462
>emb|AL035367.5|HSF10178 Homo sapiens chromosome 17 sequence from PAC RP1-178F10 region D17S842-D17S953 map 17p11.2, complete sequence Length = 132486 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1616 attcctgatgcctcccagctt 1636 ||||||||||||||||||||| Sbjct: 8789 attcctgatgcctcccagctt 8809
>gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome 12, complete sequence Length = 185710 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1972 agcccctaaagacaggactaa 1992 ||||||||||||||||||||| Sbjct: 178776 agcccctaaagacaggactaa 178756
>emb|AL732413.4| Mouse DNA sequence from clone RP23-366N13 on chromosome 2, complete sequence Length = 111921 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 cattttaaaagattctttaat 441 ||||||||||||||||||||| Sbjct: 55939 cattttaaaagattctttaat 55919 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 471,595,688 Number of extensions: 24804368 Number of successful extensions: 135494 Number of sequences better than 10.0: 56 Number of HSP's gapped: 135494 Number of HSP's successfully gapped: 100 Length of query: 2471 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2448 Effective length of database: 18,503,978,556 Effective search space: 45297739505088 Effective search space used: 45297739505088 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)