ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf79p20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059937.1| Oryza sativa (japonica cultivar-group) Os04g0532100 (Os04g0532100) mRNA, complete cds Length = 1244 Score = 256 bits (129), Expect = 2e-64 Identities = 360/437 (82%) Strand = Plus / Plus Query: 561 cgacagacgtacgaaactgcaaagcagggcctgcagacgaactactacggcacaaagcgg 620 |||||||||||||| |||||||| |||||| ||||||||||||| ||||| ||| Sbjct: 465 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactactatggcacgaagaat 524 Query: 621 gtgacggaggcgctcctgcccctgctccgatcctcatcggacggaagaatcgtcaatgtc 680 || || || || ||||| || || || | |||||| || || ||||||||||| || ||| Sbjct: 525 gtcactgaagcactcctccctctcctgcaatcctcctccgatggaagaatcgttaacgtc 584 Query: 681 tcctccaacttcggattgctcagctttttcaggaacgaggagctgaagaaggagctgaac 740 | || | |||||| |||| || || |||| ||||||||||||||| ||||||||| Sbjct: 585 gcatcaagcttcgggctgctaagattcttcacaaacgaggagctgaagcgagagctgaac 644 Query: 741 gacgtcgacagcctgacggaggagaggctggacgagctgctggccatgttcctgaaggac 800 |||| ||||||||| | ||||||||||||||||||||||||| ||||||| ||| ||| Sbjct: 645 gacgccgacagcctcagcgaggagaggctggacgagctgctgggcatgttcgtgagagac 704 Query: 801 ttcgaggccggcgcggtggaggcgcacgggtggccggccgagttctcggcgtacaaggtg 860 |||||||||||||| |||| || || |||||||||| | ||||||||||||||||||||| Sbjct: 705 ttcgaggccggcgcagtggcggagcgcgggtggccgacggagttctcggcgtacaaggtg 764 Query: 861 gccaaggccgccatgaacgcctactcgaggatcctggccaagaggcatccggagctgcgc 920 |||||||| || |||| ||| ||| ||||||||||||||| || || || | ||||||| Sbjct: 765 gccaaggcggcgatgagcgcgtacgcgaggatcctggccaggaagcgccccgcgctgcgc 824 Query: 921 gtcaactgcgcgcaccccggctacgtgaagacagacatcaccaggaactccgggatcctg 980 || ||||||| | |||| || ||||||||||| ||| | ||||||||||| || ||||| Sbjct: 825 gtgaactgcgtggacccagggtacgtgaagaccgacctgaccaggaactcgggcctcctg 884 Query: 981 acgccggaggagggcgc 997 ||||| ||||| ||||| Sbjct: 885 acgcccgaggaaggcgc 901 Score = 103 bits (52), Expect = 1e-18 Identities = 211/264 (79%) Strand = Plus / Plus Query: 185 cacaaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagca 244 ||||||||||||||| |||||||| |||| ||| |||||||||||||||| |||| ||| Sbjct: 89 cacaaggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggca 148 Query: 245 gctggccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggc 304 ||||||||| | ||| ||| |||||| |||| |||||||||||| ||| ||| |||| Sbjct: 149 gctggccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggc 208 Query: 305 ggctgtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacat 364 ||| || ||| || || | ||||||| | ||| |||||| ||||| ||| | || | Sbjct: 209 ggccgtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgt 268 Query: 365 cacggatgcttccagcatcgctcggctggcagatttcctcaagacccgtttcgggaagct 424 |||||| |||||||||||||| | | || || ||| | || |||| || |||| ||| Sbjct: 269 cacggacgcttccagcatcgccagattagccgaattcttggagtcccgctttgggaggct 328 Query: 425 tgacatcctggtgaataatgccgc 448 ||||||||||||||||||||||| Sbjct: 329 ggacatcctggtgaataatgccgc 352
>dbj|AK109281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B09, full insert sequence Length = 1245 Score = 256 bits (129), Expect = 2e-64 Identities = 360/437 (82%) Strand = Plus / Plus Query: 561 cgacagacgtacgaaactgcaaagcagggcctgcagacgaactactacggcacaaagcgg 620 |||||||||||||| |||||||| |||||| ||||||||||||| ||||| ||| Sbjct: 465 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactactatggcacgaagaat 524 Query: 621 gtgacggaggcgctcctgcccctgctccgatcctcatcggacggaagaatcgtcaatgtc 680 || || || || ||||| || || || | |||||| || || ||||||||||| || ||| Sbjct: 525 gtcactgaagcactcctccctctcctgcaatcctcctccgatggaagaatcgttaacgtc 584 Query: 681 tcctccaacttcggattgctcagctttttcaggaacgaggagctgaagaaggagctgaac 740 | || | |||||| |||| || || |||| ||||||||||||||| ||||||||| Sbjct: 585 gcatcaagcttcgggctgctaagattcttcacaaacgaggagctgaagcgagagctgaac 644 Query: 741 gacgtcgacagcctgacggaggagaggctggacgagctgctggccatgttcctgaaggac 800 |||| ||||||||| | ||||||||||||||||||||||||| ||||||| ||| ||| Sbjct: 645 gacgccgacagcctcagcgaggagaggctggacgagctgctgggcatgttcgtgagagac 704 Query: 801 ttcgaggccggcgcggtggaggcgcacgggtggccggccgagttctcggcgtacaaggtg 860 |||||||||||||| |||| || || |||||||||| | ||||||||||||||||||||| Sbjct: 705 ttcgaggccggcgcagtggcggagcgcgggtggccgacggagttctcggcgtacaaggtg 764 Query: 861 gccaaggccgccatgaacgcctactcgaggatcctggccaagaggcatccggagctgcgc 920 |||||||| || |||| ||| ||| ||||||||||||||| || || || | ||||||| Sbjct: 765 gccaaggcggcgatgagcgcgtacgcgaggatcctggccaggaagcgccccgcgctgcgc 824 Query: 921 gtcaactgcgcgcaccccggctacgtgaagacagacatcaccaggaactccgggatcctg 980 || ||||||| | |||| || ||||||||||| ||| | ||||||||||| || ||||| Sbjct: 825 gtgaactgcgtggacccagggtacgtgaagaccgacctgaccaggaactcgggcctcctg 884 Query: 981 acgccggaggagggcgc 997 ||||| ||||| ||||| Sbjct: 885 acgcccgaggaaggcgc 901 Score = 103 bits (52), Expect = 1e-18 Identities = 211/264 (79%) Strand = Plus / Plus Query: 185 cacaaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagca 244 ||||||||||||||| |||||||| |||| ||| |||||||||||||||| |||| ||| Sbjct: 89 cacaaggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggca 148 Query: 245 gctggccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggc 304 ||||||||| | ||| ||| |||||| |||| |||||||||||| ||| ||| |||| Sbjct: 149 gctggccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggc 208 Query: 305 ggctgtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacat 364 ||| || ||| || || | ||||||| | ||| |||||| ||||| ||| | || | Sbjct: 209 ggccgtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgt 268 Query: 365 cacggatgcttccagcatcgctcggctggcagatttcctcaagacccgtttcgggaagct 424 |||||| |||||||||||||| | | || || ||| | || |||| || |||| ||| Sbjct: 269 cacggacgcttccagcatcgccagattagccgaattcttggagtcccgctttgggaggct 328 Query: 425 tgacatcctggtgaataatgccgc 448 ||||||||||||||||||||||| Sbjct: 329 ggacatcctggtgaataatgccgc 352
>gb|BT016438.1| Zea mays clone Contig271 mRNA sequence Length = 1127 Score = 246 bits (124), Expect = 2e-61 Identities = 253/296 (85%) Strand = Plus / Plus Query: 670 tcgtcaatgtctcctccaacttcggattgctcagctttttcaggaacgaggagctgaaga 729 ||||||| ||||||||| ||||||| |||| ||| | |||||||||||||| | ||| Sbjct: 478 tcgtcaacgtctcctccgacttcgggctgctacgctatctcaggaacgaggaggtaaagc 537 Query: 730 aggagctgaacgacgtcgacagcctgacggaggagaggctggacgagctgctggccatgt 789 | |||||| ||||| | || ||||||||||||||||| |||||||||||||| || || Sbjct: 538 atgagctggacgacattgagggcctgacggaggagaggttggacgagctgctgagcacgt 597 Query: 790 tcctgaaggacttcgaggccggcgcggtggaggcgcacgggtggccggccgagttctcgg 849 |||| ||||||||||||||||||| |||| || | |||||||||| | |||||| | | Sbjct: 598 tcctccgggacttcgaggccggcgcgctggaagcccgcgggtggccgacggagttcgccg 657 Query: 850 cgtacaaggtggccaaggccgccatgaacgcctactcgaggatcctggccaagaggcatc 909 ||||||||||||||||||||||| ||||| ||||||||||| ||||||| | | |||| | Sbjct: 658 cgtacaaggtggccaaggccgccctgaactcctactcgagggtcctggcgaggcggcacc 717 Query: 910 cggagctgcgcgtcaactgcgcgcaccccggctacgtgaagacagacatcaccagg 965 | |||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 718 ccgagctgcgcgtcaactgcgcgcacccgggctacgtgaagaccgacatgaccagg 773 Score = 73.8 bits (37), Expect = 1e-09 Identities = 88/105 (83%) Strand = Plus / Plus Query: 187 caaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagc 246 ||||| |||| || |||||||| |||| |||||||||||||||||||| ||||| ||||| Sbjct: 1 caagggttgccgttgtcaccggcgggaacaaagggatcgggctggaggtgtgcaggcagc 60 Query: 247 tggccggtagaggcatcacggtcgttctgacggccagggacgaga 291 || | | | |||||||| ||||| ||||| ||||| ||||||| Sbjct: 61 tgttcagcaacggcatcaccgtcgtcctgacagccagagacgaga 105 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 417 gggaagcttgacatcctggtgaataatgccgcta 450 |||||||| ||||||||||| || |||||||||| Sbjct: 231 gggaagctagacatcctggtaaacaatgccgcta 264
>gb|AY109840.1| Zea mays CL5708_1 mRNA sequence Length = 1284 Score = 246 bits (124), Expect = 2e-61 Identities = 253/296 (85%) Strand = Plus / Plus Query: 670 tcgtcaatgtctcctccaacttcggattgctcagctttttcaggaacgaggagctgaaga 729 ||||||| ||||||||| ||||||| |||| ||| | |||||||||||||| ||||| Sbjct: 673 tcgtcaacgtctcctccgacttcgggctgctacgctatctcaggaacgaggaggtgaagc 732 Query: 730 aggagctgaacgacgtcgacagcctgacggaggagaggctggacgagctgctggccatgt 789 |||||| ||||| | || ||||||||||||||||||||||||||||||||| || || Sbjct: 733 gtgagctggacgacattgagggcctgacggaggagaggctggacgagctgctgggcacgt 792 Query: 790 tcctgaaggacttcgaggccggcgcggtggaggcgcacgggtggccggccgagttctcgg 849 |||| ||||||||||||||||||| ||||| | | ||| |||||| | |||||| | | Sbjct: 793 tcctccgggacttcgaggccggcgcgctggagtcccgcggctggccgacggagttcgccg 852 Query: 850 cgtacaaggtggccaaggccgccatgaacgcctactcgaggatcctggccaagaggcatc 909 ||||||||||||||||||||||| ||||| ||||||||||| ||||||| | | |||| | Sbjct: 853 cgtacaaggtggccaaggccgccctgaactcctactcgagggtcctggcgaggcggcacc 912 Query: 910 cggagctgcgcgtcaactgcgcgcaccccggctacgtgaagacagacatcaccagg 965 | |||||||||||||||||||||||||| |||||||| ||||| ||||| |||||| Sbjct: 913 ccgagctgcgcgtcaactgcgcgcacccgggctacgtcaagaccgacatgaccagg 968 Score = 89.7 bits (45), Expect = 2e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 187 caaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagc 246 ||||| |||| || |||||||| |||| |||||||||||||||||||| ||||| ||||| Sbjct: 196 caagggttgccgttgtcaccggcgggaacaaagggatcgggctggaggtgtgcaggcagc 255 Query: 247 tggccggtagaggcatcacggtcgttctgacggccagggacgaga 291 ||||| | | |||||||| ||||| ||||| ||||| ||||||| Sbjct: 256 tggccagcaacggcatcaccgtcgtcctgacagccagagacgaga 300 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 417 gggaagcttgacatcctggtgaataatgccgcta 450 |||||||| ||||||||||| || |||||||||| Sbjct: 426 gggaagctagacatcctggtaaacaatgccgcta 459
>emb|CT827958.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0125M19, complete sequence Length = 84482 Score = 238 bits (120), Expect = 4e-59 Identities = 243/284 (85%) Strand = Plus / Minus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 ||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||| Sbjct: 66722 aacgaggagctgaagcgagagctgaacgacgccgacagcctcagcgaggagaggctggac 66663 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 |||||||||| ||||||| ||| ||||||||||||||||| |||| || || ||||||| Sbjct: 66662 gagctgctgggcatgttcgtgagagacttcgaggccggcgcagtggcggagcgcgggtgg 66603 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | ||||||||||||||||||||||||||||| || |||| ||| ||| |||||||| Sbjct: 66602 ccgacggagttctcggcgtacaaggtggccaaggcggcgatgagcgcgtacgcgaggatc 66543 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||||||| || || || | ||||||||| ||||||| | |||| || ||||||||||| Sbjct: 66542 ctggccaggaagcgccccgcgctgcgcgtgaactgcgtggacccagggtacgtgaagacc 66483 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgc 997 ||| | ||||||||||| || |||||||||| ||||| ||||| Sbjct: 66482 gacctgaccaggaactcgggcctcctgacgcccgaggaaggcgc 66439 Score = 236 bits (119), Expect = 1e-58 Identities = 242/283 (85%) Strand = Plus / Minus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||||| || | ||| || ||||| |||||||| Sbjct: 45601 aacgaggatctgaggaaggagctggacgacgttgataacctcaccgaggaacggctggac 45542 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| |||||| || |||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 45541 gaggtgctggacagcttcctgaaagacttcgaggccggcgcgctggaggcgcacgggtgg 45482 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | | |||| ||||||||||| |||||||| ||||||||||| ||| |||||||| Sbjct: 45481 ccgacggcgttcgcggcgtacaagacggccaaggtggccatgaacgcgtacacgaggatc 45422 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 |||| | |||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 45421 ttggcgaggaggcacccggagctgcgcgtcaactgcgcgcacccgggctacgtcaagacg 45362 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcg 996 ||||| |||| |||| || |||||||||| |||||||||| Sbjct: 45361 gacatgaccatcgactcgggattcctgacgcccgaggagggcg 45319 Score = 222 bits (112), Expect = 2e-54 Identities = 243/286 (84%), Gaps = 3/286 (1%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||||| || | ||| || ||||| |||||||| Sbjct: 38897 aacgaggatctgaggaaggagctggacgacgttgataacctcaccgaggaacggctggac 38956 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| |||||| || |||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 38957 gaggtgctggacagcttcctgaaagacttcgaggccggcgcgctggaggcgcacgggtgg 39016 Query: 834 ccggccgag---ttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgagg 890 ||| | | | ||| |||||||||| ||||||||| ||||||||||| ||| ||||| Sbjct: 39017 ccgacggcgccgttcgtggcgtacaagatggccaaggtggccatgaacgcgtacacgagg 39076 Query: 891 atcctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaag 950 ||| |||| | |||||| |||||||||||||||||||||| |||||| |||||||| ||| Sbjct: 39077 atcttggcgaggaggcacccggagctgcgcgtcaactgcgtgcacccgggctacgtcaag 39136 Query: 951 acagacatcaccaggaactccgggatcctgacgccggaggagggcg 996 || ||||| |||| ||||| ||| |||||||||| |||||||||| Sbjct: 39137 acggacatgaccatcaactcggggttcctgacgcccgaggagggcg 39182 Score = 192 bits (97), Expect = 2e-45 Identities = 306/373 (82%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||| | |||| ||| || ||||| |||||||| Sbjct: 72916 aacgaggatctgaggaaggagctggacgacattgacaacctcaccgaggaacggctggac 72975 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| ||||||||| |||||||| |||||||||||||||| | ||||||||||||| ||| Sbjct: 72976 gaggtgctggccagcttcctgaaagacttcgaggccggcgagctggaggcgcacggatgg 73035 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | || ||||||||||||||||||||| ||||||||||| ||| |||||||| Sbjct: 73036 ccgatggggtcggcggcgtacaaggtggccaaggtggccatgaacgcgtacacgaggatc 73095 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||| | || ||| || | ||||||| |||||||||||||||| |||||||| ||||| Sbjct: 73096 tcggcgaggaagcacccagcgctgcgcatcaactgcgcgcacccaggctacgtcaagacg 73155 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgctcggaacatcactggc 1013 ||| | |||| ||||| ||| |||||||||| ||||||||||| ||||| || || | Sbjct: 73156 gacctgaccatcaactcggggttcctgacgcccgaggagggcgcgaggaacgtc-gtgac 73214 Query: 1014 -gttgcgctgctgccggaaggcgggcagaccggcaagtacttctccgaaggcgaggaggc 1072 || || ||||||||||| ||||||| |||||| || |||| ||| ||| ||||||| Sbjct: 73215 ggtggccctgctgccggacggcgggccaaccggcgcgttcttcgacgagggcaaggaggc 73274 Query: 1073 atcgttcgtgtga 1085 |||||||||||| Sbjct: 73275 gtcgttcgtgtga 73287 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | |||||||||||||||||||| |||| ||||||||||| Sbjct: 38028 ttgctgtggtcaccggcggcaacaaagggatcgggctggaggtgtgccggcagctggccg 38087 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 38088 ccgacggcatcacggttgttctgacagccagggacgagacgagggg 38133 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | ||||| |||||||||||||| |||| ||||||||||| Sbjct: 72034 ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 72093 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 72094 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 72139 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | |||||||||||| ||||||| |||| ||||||||| | Sbjct: 46472 ttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagctggctg 46413 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 46412 ccgacggcatcacggtggttctgacggccagggacgagacgagggg 46367 Score = 89.7 bits (45), Expect = 2e-14 Identities = 159/197 (80%) Strand = Plus / Minus Query: 189 aggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctg 248 ||||||||||| |||||||| |||| ||| |||||||||||||||| |||| ||||||| Sbjct: 67641 aggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggcagctg 67582 Query: 249 gccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggcggct 308 ||||| | ||| ||| |||||| |||| |||||||||||| ||| ||| ||||||| Sbjct: 67581 gccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggcggcc 67522 Query: 309 gtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacatcacg 368 || ||| || || | ||||||| | ||| |||||| ||||| ||| | || ||||| Sbjct: 67521 gtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgtcacg 67462 Query: 369 gatgcttccagcatcgc 385 || |||||||||||||| Sbjct: 67461 gacgcttccagcatcgc 67445 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactacta 607 |||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 72668 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 72710 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactactacggcacaaagc 618 |||||||||| | |||||| | ||| |||||||||||||||||||||| |||| Sbjct: 38636 agacgtacgacgccgcaaagaacggcgtgcagacgaactactacggcacgaagc 38689 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Minus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||| | |||||| | ||| |||||||||||||||||||||| Sbjct: 45858 agacgtacgacgccgcaaagaacggcgtgcagacgaactactacggcac 45810 Score = 50.1 bits (25), Expect = 0.019 Identities = 46/53 (86%) Strand = Plus / Minus Query: 561 cgacagacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 66955 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactactatggcac 66903
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 238 bits (120), Expect = 4e-59 Identities = 243/284 (85%) Strand = Plus / Minus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 ||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||| Sbjct: 26585807 aacgaggagctgaagcgagagctgaacgacgccgacagcctcagcgaggagaggctggac 26585748 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 |||||||||| ||||||| ||| ||||||||||||||||| |||| || || ||||||| Sbjct: 26585747 gagctgctgggcatgttcgtgagagacttcgaggccggcgcagtggcggagcgcgggtgg 26585688 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | ||||||||||||||||||||||||||||| || |||| ||| ||| |||||||| Sbjct: 26585687 ccgacggagttctcggcgtacaaggtggccaaggcggcgatgagcgcgtacgcgaggatc 26585628 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||||||| || || || | ||||||||| ||||||| | |||| || ||||||||||| Sbjct: 26585627 ctggccaggaagcgccccgcgctgcgcgtgaactgcgtggacccagggtacgtgaagacc 26585568 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgc 997 ||| | ||||||||||| || |||||||||| ||||| ||||| Sbjct: 26585567 gacctgaccaggaactcgggcctcctgacgcccgaggaaggcgc 26585524 Score = 236 bits (119), Expect = 1e-58 Identities = 242/283 (85%) Strand = Plus / Minus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||||| || | ||| || ||||| |||||||| Sbjct: 26564719 aacgaggatctgaggaaggagctggacgacgttgataacctcaccgaggaacggctggac 26564660 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| |||||| || |||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 26564659 gaggtgctggacagcttcctgaaagacttcgaggccggcgcgctggaggcgcacgggtgg 26564600 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | | |||| ||||||||||| |||||||| ||||||||||| ||| |||||||| Sbjct: 26564599 ccgacggcgttcgcggcgtacaagacggccaaggtggccatgaacgcgtacacgaggatc 26564540 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 |||| | |||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 26564539 ttggcgaggaggcacccggagctgcgcgtcaactgcgcgcacccgggctacgtcaagacg 26564480 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcg 996 ||||| |||| |||| || |||||||||| |||||||||| Sbjct: 26564479 gacatgaccatcgactcgggattcctgacgcccgaggagggcg 26564437 Score = 222 bits (112), Expect = 2e-54 Identities = 243/286 (84%), Gaps = 3/286 (1%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||||| || | ||| || ||||| |||||||| Sbjct: 26558009 aacgaggatctgaggaaggagctggacgacgttgataacctcaccgaggaacggctggac 26558068 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| |||||| || |||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 26558069 gaggtgctggacagcttcctgaaagacttcgaggccggcgcgctggaggcgcacgggtgg 26558128 Query: 834 ccggccgag---ttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgagg 890 ||| | | | ||| |||||||||| ||||||||| ||||||||||| ||| ||||| Sbjct: 26558129 ccgacggcgccgttcgtggcgtacaagatggccaaggtggccatgaacgcgtacacgagg 26558188 Query: 891 atcctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaag 950 ||| |||| | |||||| |||||||||||||||||||||| |||||| |||||||| ||| Sbjct: 26558189 atcttggcgaggaggcacccggagctgcgcgtcaactgcgtgcacccgggctacgtcaag 26558248 Query: 951 acagacatcaccaggaactccgggatcctgacgccggaggagggcg 996 || ||||| |||| ||||| ||| |||||||||| |||||||||| Sbjct: 26558249 acggacatgaccatcaactcggggttcctgacgcccgaggagggcg 26558294 Score = 192 bits (97), Expect = 2e-45 Identities = 306/373 (82%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||| | |||| ||| || ||||| |||||||| Sbjct: 26592001 aacgaggatctgaggaaggagctggacgacattgacaacctcaccgaggaacggctggac 26592060 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| ||||||||| |||||||| |||||||||||||||| | ||||||||||||| ||| Sbjct: 26592061 gaggtgctggccagcttcctgaaagacttcgaggccggcgagctggaggcgcacggatgg 26592120 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | || ||||||||||||||||||||| ||||||||||| ||| |||||||| Sbjct: 26592121 ccgatggggtcggcggcgtacaaggtggccaaggtggccatgaacgcgtacacgaggatc 26592180 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||| | || ||| || | ||||||| |||||||||||||||| |||||||| ||||| Sbjct: 26592181 tcggcgaggaagcacccagcgctgcgcatcaactgcgcgcacccaggctacgtcaagacg 26592240 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgctcggaacatcactggc 1013 ||| | |||| ||||| ||| |||||||||| ||||||||||| ||||| || || | Sbjct: 26592241 gacctgaccatcaactcggggttcctgacgcccgaggagggcgcgaggaacgtc-gtgac 26592299 Query: 1014 -gttgcgctgctgccggaaggcgggcagaccggcaagtacttctccgaaggcgaggaggc 1072 || || ||||||||||| ||||||| |||||| || |||| ||| ||| ||||||| Sbjct: 26592300 ggtggccctgctgccggacggcgggccaaccggcgcgttcttcgacgagggcaaggaggc 26592359 Query: 1073 atcgttcgtgtga 1085 |||||||||||| Sbjct: 26592360 gtcgttcgtgtga 26592372 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | |||||||||||||||||||| |||| ||||||||||| Sbjct: 26557140 ttgctgtggtcaccggcggcaacaaagggatcgggctggaggtgtgccggcagctggccg 26557199 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 26557200 ccgacggcatcacggttgttctgacagccagggacgagacgagggg 26557245 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | ||||| |||||||||||||| |||| ||||||||||| Sbjct: 26591119 ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 26591178 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 26591179 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 26591224 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | |||||||||||| ||||||| |||| ||||||||| | Sbjct: 26565590 ttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagctggctg 26565531 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 26565530 ccgacggcatcacggtggttctgacggccagggacgagacgagggg 26565485 Score = 89.7 bits (45), Expect = 2e-14 Identities = 159/197 (80%) Strand = Plus / Minus Query: 189 aggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctg 248 ||||||||||| |||||||| |||| ||| |||||||||||||||| |||| ||||||| Sbjct: 26586726 aggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggcagctg 26586667 Query: 249 gccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggcggct 308 ||||| | ||| ||| |||||| |||| |||||||||||| ||| ||| ||||||| Sbjct: 26586666 gccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggcggcc 26586607 Query: 309 gtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacatcacg 368 || ||| || || | ||||||| | ||| |||||| ||||| ||| | || ||||| Sbjct: 26586606 gtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgtcacg 26586547 Query: 369 gatgcttccagcatcgc 385 || |||||||||||||| Sbjct: 26586546 gacgcttccagcatcgc 26586530 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactacta 607 |||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 26591753 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 26591795 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactactacggcacaaagc 618 |||||||||| | |||||| | ||| |||||||||||||||||||||| |||| Sbjct: 26557748 agacgtacgacgccgcaaagaacggcgtgcagacgaactactacggcacgaagc 26557801 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Minus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||| | |||||| | ||| |||||||||||||||||||||| Sbjct: 26564976 agacgtacgacgccgcaaagaacggcgtgcagacgaactactacggcac 26564928 Score = 50.1 bits (25), Expect = 0.019 Identities = 46/53 (86%) Strand = Plus / Minus Query: 561 cgacagacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 26586040 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactactatggcac 26585988
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24, complete sequence Length = 121056 Score = 238 bits (120), Expect = 4e-59 Identities = 243/284 (85%) Strand = Plus / Minus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 ||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||| Sbjct: 25365 aacgaggagctgaagcgagagctgaacgacgccgacagcctcagcgaggagaggctggac 25306 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 |||||||||| ||||||| ||| ||||||||||||||||| |||| || || ||||||| Sbjct: 25305 gagctgctgggcatgttcgtgagagacttcgaggccggcgcagtggcggagcgcgggtgg 25246 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | ||||||||||||||||||||||||||||| || |||| ||| ||| |||||||| Sbjct: 25245 ccgacggagttctcggcgtacaaggtggccaaggcggcgatgagcgcgtacgcgaggatc 25186 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||||||| || || || | ||||||||| ||||||| | |||| || ||||||||||| Sbjct: 25185 ctggccaggaagcgccccgcgctgcgcgtgaactgcgtggacccagggtacgtgaagacc 25126 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgc 997 ||| | ||||||||||| || |||||||||| ||||| ||||| Sbjct: 25125 gacctgaccaggaactcgggcctcctgacgcccgaggaaggcgc 25082 Score = 236 bits (119), Expect = 1e-58 Identities = 242/283 (85%) Strand = Plus / Minus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||||| || | ||| || ||||| |||||||| Sbjct: 4277 aacgaggatctgaggaaggagctggacgacgttgataacctcaccgaggaacggctggac 4218 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| |||||| || |||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 4217 gaggtgctggacagcttcctgaaagacttcgaggccggcgcgctggaggcgcacgggtgg 4158 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | | |||| ||||||||||| |||||||| ||||||||||| ||| |||||||| Sbjct: 4157 ccgacggcgttcgcggcgtacaagacggccaaggtggccatgaacgcgtacacgaggatc 4098 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 |||| | |||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 4097 ttggcgaggaggcacccggagctgcgcgtcaactgcgcgcacccgggctacgtcaagacg 4038 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcg 996 ||||| |||| |||| || |||||||||| |||||||||| Sbjct: 4037 gacatgaccatcgactcgggattcctgacgcccgaggagggcg 3995 Score = 192 bits (97), Expect = 2e-45 Identities = 306/373 (82%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||| | |||| ||| || ||||| |||||||| Sbjct: 31559 aacgaggatctgaggaaggagctggacgacattgacaacctcaccgaggaacggctggac 31618 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| ||||||||| |||||||| |||||||||||||||| | ||||||||||||| ||| Sbjct: 31619 gaggtgctggccagcttcctgaaagacttcgaggccggcgagctggaggcgcacggatgg 31678 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | || ||||||||||||||||||||| ||||||||||| ||| |||||||| Sbjct: 31679 ccgatggggtcggcggcgtacaaggtggccaaggtggccatgaacgcgtacacgaggatc 31738 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||| | || ||| || | ||||||| |||||||||||||||| |||||||| ||||| Sbjct: 31739 tcggcgaggaagcacccagcgctgcgcatcaactgcgcgcacccaggctacgtcaagacg 31798 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgctcggaacatcactggc 1013 ||| | |||| ||||| ||| |||||||||| ||||||||||| ||||| || || | Sbjct: 31799 gacctgaccatcaactcggggttcctgacgcccgaggagggcgcgaggaacgtc-gtgac 31857 Query: 1014 -gttgcgctgctgccggaaggcgggcagaccggcaagtacttctccgaaggcgaggaggc 1072 || || ||||||||||| ||||||| |||||| || |||| ||| ||| ||||||| Sbjct: 31858 ggtggccctgctgccggacggcgggccaaccggcgcgttcttcgacgagggcaaggaggc 31917 Query: 1073 atcgttcgtgtga 1085 |||||||||||| Sbjct: 31918 gtcgttcgtgtga 31930 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | ||||| |||||||||||||| |||| ||||||||||| Sbjct: 30677 ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 30736 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 30737 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 30782 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | |||||||||||| ||||||| |||| ||||||||| | Sbjct: 5148 ttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagctggctg 5089 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5088 ccgacggcatcacggtggttctgacggccagggacgagacgagggg 5043 Score = 89.7 bits (45), Expect = 2e-14 Identities = 159/197 (80%) Strand = Plus / Minus Query: 189 aggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctg 248 ||||||||||| |||||||| |||| ||| |||||||||||||||| |||| ||||||| Sbjct: 26284 aggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggcagctg 26225 Query: 249 gccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggcggct 308 ||||| | ||| ||| |||||| |||| |||||||||||| ||| ||| ||||||| Sbjct: 26224 gccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggcggcc 26165 Query: 309 gtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacatcacg 368 || ||| || || | ||||||| | ||| |||||| ||||| ||| | || ||||| Sbjct: 26164 gtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgtcacg 26105 Query: 369 gatgcttccagcatcgc 385 || |||||||||||||| Sbjct: 26104 gacgcttccagcatcgc 26088 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactacta 607 |||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 31311 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 31353 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Minus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||| | |||||| | ||| |||||||||||||||||||||| Sbjct: 4534 agacgtacgacgccgcaaagaacggcgtgcagacgaactactacggcac 4486 Score = 50.1 bits (25), Expect = 0.019 Identities = 46/53 (86%) Strand = Plus / Minus Query: 561 cgacagacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 25598 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactactatggcac 25546
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 238 bits (120), Expect = 4e-59 Identities = 243/284 (85%) Strand = Plus / Minus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 ||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||| Sbjct: 122693 aacgaggagctgaagcgagagctgaacgacgccgacagcctcagcgaggagaggctggac 122634 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 |||||||||| ||||||| ||| ||||||||||||||||| |||| || || ||||||| Sbjct: 122633 gagctgctgggcatgttcgtgagagacttcgaggccggcgcagtggcggagcgcgggtgg 122574 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | ||||||||||||||||||||||||||||| || |||| ||| ||| |||||||| Sbjct: 122573 ccgacggagttctcggcgtacaaggtggccaaggcggcgatgagcgcgtacgcgaggatc 122514 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||||||| || || || | ||||||||| ||||||| | |||| || ||||||||||| Sbjct: 122513 ctggccaggaagcgccccgcgctgcgcgtgaactgcgtggacccagggtacgtgaagacc 122454 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgc 997 ||| | ||||||||||| || |||||||||| ||||| ||||| Sbjct: 122453 gacctgaccaggaactcgggcctcctgacgcccgaggaaggcgc 122410 Score = 236 bits (119), Expect = 1e-58 Identities = 242/283 (85%) Strand = Plus / Minus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||||| || | ||| || ||||| |||||||| Sbjct: 101605 aacgaggatctgaggaaggagctggacgacgttgataacctcaccgaggaacggctggac 101546 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| |||||| || |||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 101545 gaggtgctggacagcttcctgaaagacttcgaggccggcgcgctggaggcgcacgggtgg 101486 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | | |||| ||||||||||| |||||||| ||||||||||| ||| |||||||| Sbjct: 101485 ccgacggcgttcgcggcgtacaagacggccaaggtggccatgaacgcgtacacgaggatc 101426 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 |||| | |||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 101425 ttggcgaggaggcacccggagctgcgcgtcaactgcgcgcacccgggctacgtcaagacg 101366 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcg 996 ||||| |||| |||| || |||||||||| |||||||||| Sbjct: 101365 gacatgaccatcgactcgggattcctgacgcccgaggagggcg 101323 Score = 222 bits (112), Expect = 2e-54 Identities = 243/286 (84%), Gaps = 3/286 (1%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||||| || | ||| || ||||| |||||||| Sbjct: 94895 aacgaggatctgaggaaggagctggacgacgttgataacctcaccgaggaacggctggac 94954 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| |||||| || |||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 94955 gaggtgctggacagcttcctgaaagacttcgaggccggcgcgctggaggcgcacgggtgg 95014 Query: 834 ccggccgag---ttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgagg 890 ||| | | | ||| |||||||||| ||||||||| ||||||||||| ||| ||||| Sbjct: 95015 ccgacggcgccgttcgtggcgtacaagatggccaaggtggccatgaacgcgtacacgagg 95074 Query: 891 atcctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaag 950 ||| |||| | |||||| |||||||||||||||||||||| |||||| |||||||| ||| Sbjct: 95075 atcttggcgaggaggcacccggagctgcgcgtcaactgcgtgcacccgggctacgtcaag 95134 Query: 951 acagacatcaccaggaactccgggatcctgacgccggaggagggcg 996 || ||||| |||| ||||| ||| |||||||||| |||||||||| Sbjct: 95135 acggacatgaccatcaactcggggttcctgacgcccgaggagggcg 95180 Score = 192 bits (97), Expect = 2e-45 Identities = 306/373 (82%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||| | |||| ||| || ||||| |||||||| Sbjct: 128887 aacgaggatctgaggaaggagctggacgacattgacaacctcaccgaggaacggctggac 128946 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| ||||||||| |||||||| |||||||||||||||| | ||||||||||||| ||| Sbjct: 128947 gaggtgctggccagcttcctgaaagacttcgaggccggcgagctggaggcgcacggatgg 129006 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | || ||||||||||||||||||||| ||||||||||| ||| |||||||| Sbjct: 129007 ccgatggggtcggcggcgtacaaggtggccaaggtggccatgaacgcgtacacgaggatc 129066 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||| | || ||| || | ||||||| |||||||||||||||| |||||||| ||||| Sbjct: 129067 tcggcgaggaagcacccagcgctgcgcatcaactgcgcgcacccaggctacgtcaagacg 129126 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgctcggaacatcactggc 1013 ||| | |||| ||||| ||| |||||||||| ||||||||||| ||||| || || | Sbjct: 129127 gacctgaccatcaactcggggttcctgacgcccgaggagggcgcgaggaacgtc-gtgac 129185 Query: 1014 -gttgcgctgctgccggaaggcgggcagaccggcaagtacttctccgaaggcgaggaggc 1072 || || ||||||||||| ||||||| |||||| || |||| ||| ||| ||||||| Sbjct: 129186 ggtggccctgctgccggacggcgggccaaccggcgcgttcttcgacgagggcaaggaggc 129245 Query: 1073 atcgttcgtgtga 1085 |||||||||||| Sbjct: 129246 gtcgttcgtgtga 129258 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | |||||||||||||||||||| |||| ||||||||||| Sbjct: 94026 ttgctgtggtcaccggcggcaacaaagggatcgggctggaggtgtgccggcagctggccg 94085 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 94086 ccgacggcatcacggttgttctgacagccagggacgagacgagggg 94131 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | ||||| |||||||||||||| |||| ||||||||||| Sbjct: 128005 ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 128064 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 128065 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 128110 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | |||||||||||| ||||||| |||| ||||||||| | Sbjct: 102476 ttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagctggctg 102417 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 102416 ccgacggcatcacggtggttctgacggccagggacgagacgagggg 102371 Score = 89.7 bits (45), Expect = 2e-14 Identities = 159/197 (80%) Strand = Plus / Minus Query: 189 aggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctg 248 ||||||||||| |||||||| |||| ||| |||||||||||||||| |||| ||||||| Sbjct: 123612 aggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggcagctg 123553 Query: 249 gccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggcggct 308 ||||| | ||| ||| |||||| |||| |||||||||||| ||| ||| ||||||| Sbjct: 123552 gccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggcggcc 123493 Query: 309 gtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacatcacg 368 || ||| || || | ||||||| | ||| |||||| ||||| ||| | || ||||| Sbjct: 123492 gtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgtcacg 123433 Query: 369 gatgcttccagcatcgc 385 || |||||||||||||| Sbjct: 123432 gacgcttccagcatcgc 123416 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactacta 607 |||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 128639 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 128681 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactactacggcacaaagc 618 |||||||||| | |||||| | ||| |||||||||||||||||||||| |||| Sbjct: 94634 agacgtacgacgccgcaaagaacggcgtgcagacgaactactacggcacgaagc 94687 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Minus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||| | |||||| | ||| |||||||||||||||||||||| Sbjct: 101862 agacgtacgacgccgcaaagaacggcgtgcagacgaactactacggcac 101814 Score = 50.1 bits (25), Expect = 0.019 Identities = 46/53 (86%) Strand = Plus / Minus Query: 561 cgacagacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 122926 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactactatggcac 122874
>ref|NM_001059936.1| Oryza sativa (japonica cultivar-group) Os04g0531900 (Os04g0531900) mRNA, complete cds Length = 1303 Score = 236 bits (119), Expect = 1e-58 Identities = 242/283 (85%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||||| || | ||| || ||||| |||||||| Sbjct: 646 aacgaggatctgaggaaggagctggacgacgttgataacctcaccgaggaacggctggac 705 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| |||||| || |||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 706 gaggtgctggacagcttcctgaaagacttcgaggccggcgcgctggaggcgcacgggtgg 765 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | | |||| ||||||||||| |||||||| ||||||||||| ||| |||||||| Sbjct: 766 ccgacggcgttcgcggcgtacaagacggccaaggtggccatgaacgcgtacacgaggatc 825 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 |||| | |||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 826 ttggcgaggaggcacccggagctgcgcgtcaactgcgcgcacccgggctacgtcaagacg 885 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcg 996 ||||| |||| |||| || |||||||||| |||||||||| Sbjct: 886 gacatgaccatcgactcgggattcctgacgcccgaggagggcg 928 Score = 101 bits (51), Expect = 6e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 188 aaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagct 247 |||| |||||||||||||||| || | |||||||||||| ||||||| |||| |||||| Sbjct: 129 aagggttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagct 188 Query: 248 ggccggtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 189 ggctgccgacggcatcacggtggttctgacggccagggacgagacgagggg 239 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||| | |||||| | ||| |||||||||||||||||||||| Sbjct: 494 agacgtacgacgccgcaaagaacggcgtgcagacgaactactacggcac 542 Score = 44.1 bits (22), Expect = 1.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 384 gctcggctggcagatttcctcaagacccgtttcgggaagcttgacatcctggtgaataat 443 |||||| |||| |||||| | ||||| ||||| || ||||| || || |||||||||||| Sbjct: 325 gctcggttggctgatttcttgaagactcgttttggcaagctagatatactggtgaataat 384 Query: 444 gc 445 || Sbjct: 385 gc 386
>dbj|AK071069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081M12, full insert sequence Length = 1304 Score = 236 bits (119), Expect = 1e-58 Identities = 242/283 (85%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||||| || | ||| || ||||| |||||||| Sbjct: 647 aacgaggatctgaggaaggagctggacgacgttgataacctcaccgaggaacggctggac 706 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| |||||| || |||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 707 gaggtgctggacagcttcctgaaagacttcgaggccggcgcgctggaggcgcacgggtgg 766 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | | |||| ||||||||||| |||||||| ||||||||||| ||| |||||||| Sbjct: 767 ccgacggcgttcgcggcgtacaagacggccaaggtggccatgaacgcgtacacgaggatc 826 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 |||| | |||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 827 ttggcgaggaggcacccggagctgcgcgtcaactgcgcgcacccgggctacgtcaagacg 886 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcg 996 ||||| |||| |||| || |||||||||| |||||||||| Sbjct: 887 gacatgaccatcgactcgggattcctgacgcccgaggagggcg 929 Score = 101 bits (51), Expect = 6e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 188 aaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagct 247 |||| |||||||||||||||| || | |||||||||||| ||||||| |||| |||||| Sbjct: 130 aagggttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagct 189 Query: 248 ggccggtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 190 ggctgccgacggcatcacggtggttctgacggccagggacgagacgagggg 240 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactactacggcac 613 |||||||||| | |||||| | ||| |||||||||||||||||||||| Sbjct: 495 agacgtacgacgccgcaaagaacggcgtgcagacgaactactacggcac 543 Score = 44.1 bits (22), Expect = 1.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 384 gctcggctggcagatttcctcaagacccgtttcgggaagcttgacatcctggtgaataat 443 |||||| |||| |||||| | ||||| ||||| || ||||| || || |||||||||||| Sbjct: 326 gctcggttggctgatttcttgaagactcgttttggcaagctagatatactggtgaataat 385 Query: 444 gc 445 || Sbjct: 386 gc 387
>emb|CT837680.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA008P23, full insert sequence Length = 1160 Score = 192 bits (97), Expect = 2e-45 Identities = 306/373 (82%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||| | |||| ||| || ||||| |||||||| Sbjct: 644 aacgaggatctgaggaaggagctggacgacattgacaacctcaccgaggaacggctggac 703 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| ||||||||| |||||||| |||||||||||||||| | ||||||||||||| ||| Sbjct: 704 gaggtgctggccagcttcctgaaagacttcgaggccggcgagctggaggcgcacggatgg 763 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | || ||||||||||||||||||||| ||||||||||| ||| |||||||| Sbjct: 764 ccgatggggtcggcggcgtacaaggtggccaaggtggccatgaacgcgtacacgaggatc 823 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||| | || ||| || | ||||||| |||||||||||||||| |||||||| ||||| Sbjct: 824 tcggcgaggaagcacccagcgctgcgcatcaactgcgcgcacccaggctacgtcaagacg 883 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgctcggaacatcactggc 1013 ||| | |||| ||||| ||| |||||||||| ||||||||||| ||||| || || | Sbjct: 884 gacctgaccatcaactcggggttcctgacgcccgaggagggcgcgaggaacgtc-gtgac 942 Query: 1014 -gttgcgctgctgccggaaggcgggcagaccggcaagtacttctccgaaggcgaggaggc 1072 || || ||||||||||| ||||||| |||||| || |||| ||| ||| ||||||| Sbjct: 943 ggtggccctgctgccggacggcgggccaaccggcgcgttcttcgacgagggcaaggaggc 1002 Query: 1073 atcgttcgtgtga 1085 |||||||||||| Sbjct: 1003 gtcgttcgtgtga 1015 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | ||||| |||||||||||||| |||| ||||||||||| Sbjct: 130 ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 189 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 190 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 235 Score = 60.0 bits (30), Expect = 2e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 375 tccagcatcgctcggctggcagatttcctcaagacccgtttcgggaagcttgacatcctg 434 |||||| | |||||| |||| |||||| | ||||| ||||| || ||||| ||||| ||| Sbjct: 312 tccagcgttgctcggttggctgatttcttgaagactcgttttggcaagctagacatactg 371 Query: 435 gtgaataatgccgc 448 |||||||||||||| Sbjct: 372 gtgaataatgccgc 385 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactacta 607 |||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 490 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 532
>ref|NM_001059939.1| Oryza sativa (japonica cultivar-group) Os04g0532400 (Os04g0532400) mRNA, complete cds Length = 1041 Score = 192 bits (97), Expect = 2e-45 Identities = 306/373 (82%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 714 aacgaggagctgaagaaggagctgaacgacgtcgacagcctgacggaggagaggctggac 773 |||||||| |||| |||||||||| ||||| | |||| ||| || ||||| |||||||| Sbjct: 670 aacgaggatctgaggaaggagctggacgacattgacaacctcaccgaggaacggctggac 729 Query: 774 gagctgctggccatgttcctgaaggacttcgaggccggcgcggtggaggcgcacgggtgg 833 ||| ||||||||| |||||||| |||||||||||||||| | ||||||||||||| ||| Sbjct: 730 gaggtgctggccagcttcctgaaagacttcgaggccggcgagctggaggcgcacggatgg 789 Query: 834 ccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcctactcgaggatc 893 ||| | || ||||||||||||||||||||| ||||||||||| ||| |||||||| Sbjct: 790 ccgatggggtcggcggcgtacaaggtggccaaggtggccatgaacgcgtacacgaggatc 849 Query: 894 ctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggctacgtgaagaca 953 ||| | || ||| || | ||||||| |||||||||||||||| |||||||| ||||| Sbjct: 850 tcggcgaggaagcacccagcgctgcgcatcaactgcgcgcacccaggctacgtcaagacg 909 Query: 954 gacatcaccaggaactccgggatcctgacgccggaggagggcgctcggaacatcactggc 1013 ||| | |||| ||||| ||| |||||||||| ||||||||||| ||||| || || | Sbjct: 910 gacctgaccatcaactcggggttcctgacgcccgaggagggcgcgaggaacgtc-gtgac 968 Query: 1014 -gttgcgctgctgccggaaggcgggcagaccggcaagtacttctccgaaggcgaggaggc 1072 || || ||||||||||| ||||||| |||||| || |||| ||| ||| ||||||| Sbjct: 969 ggtggccctgctgccggacggcgggccaaccggcgcgttcttcgacgagggcaaggaggc 1028 Query: 1073 atcgttcgtgtga 1085 |||||||||||| Sbjct: 1029 gtcgttcgtgtga 1041 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 193 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 252 |||||||||||||||| || | ||||| |||||||||||||| |||| ||||||||||| Sbjct: 44 ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 103 Query: 253 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 298 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 149 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 565 agacgtacgaaactgcaaagcagggcctgcagacgaactacta 607 |||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 521 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 563
>gb|AY107867.1| Zea mays PCO096967 mRNA sequence Length = 458 Score = 103 bits (52), Expect = 1e-18 Identities = 145/176 (82%) Strand = Plus / Minus Query: 822 gcgcacgggtggccggccgagttctcggcgtacaaggtggccaaggccgccatgaacgcc 881 |||| |||||||||||| | |||| ||||||||||||||| |||||| ||||||||||| Sbjct: 445 gcgcgcgggtggccggcggcgttcgcggcgtacaaggtgggcaaggcggccatgaacgcg 386 Query: 882 tactcgaggatcctggccaagaggcatccggagctgcgcgtcaactgcgcgcaccccggc 941 ||||||||||||||||| | ||| ||| ||||||||||||||||| ||| || || Sbjct: 385 tactcgaggatcctggcggcggagcagccgacgctgcgcgtcaactgcgtgcatcctggt 326 Query: 942 tacgtgaagacagacatcaccaggaactccgggatcctgacgccggaggagggcgc 997 ||| | ||||| ||||| ||| | ||| ||| |||||||||| ||||| ||||| Sbjct: 325 tacatcaagaccgacataaccttgcgctcggggctcctgacgcccgaggaaggcgc 270
>gb|AY107601.1| Zea mays PCO136665 mRNA sequence Length = 519 Score = 67.9 bits (34), Expect = 8e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 363 atcacggatgcttccagcatcgctcggctggcagatttcctcaagacccgtttcgggaag 422 ||||||||||||||||||||||||||| |||| | ||| | ||| |||| ||| ||||| Sbjct: 260 atcacggatgcttccagcatcgctcggttggccaacttcttgaaggcccgattcaggaag 319 Query: 423 cttgacatcctggtgaataatgccgc 448 | || |||||||| ||||||||||| Sbjct: 320 ttggatatcctggtcaataatgccgc 345 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Plus Query: 589 gcctgcagacgaactactacggcacaaagc 618 |||||||||| ||||||||||||||||||| Sbjct: 486 gcctgcagacaaactactacggcacaaagc 515 Score = 46.1 bits (23), Expect = 0.29 Identities = 71/87 (81%) Strand = Plus / Plus Query: 185 cacaaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagca 244 |||||| ||||| ||||||||||| | || || ||| |||||||| |||| |||| ||| Sbjct: 82 cacaagaattgccgtggtcaccggcgcgaacagaggtatcgggctagaggtgtgccggca 141 Query: 245 gctggccggtagaggcatcacggtcgt 271 |||||| || || ||| |||| ||||| Sbjct: 142 gctggctggcagtggcgtcaccgtcgt 168
>ref|NM_001067214.1| Oryza sativa (japonica cultivar-group) Os07g0685800 (Os07g0685800) mRNA, complete cds Length = 1310 Score = 61.9 bits (31), Expect = 5e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 888 aggatcctggccaagaggcatccggagctgcgcgtcaactgcg 930 |||||||||||||||||||| |||||| ||||| ||||||||| Sbjct: 961 aggatcctggccaagaggcacccggagatgcgcatcaactgcg 1003
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 61.9 bits (31), Expect = 5e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 888 aggatcctggccaagaggcatccggagctgcgcgtcaactgcg 930 |||||||||||||||||||| |||||| ||||| ||||||||| Sbjct: 29071012 aggatcctggccaagaggcacccggagatgcgcatcaactgcg 29071054
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 61.9 bits (31), Expect = 5e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 888 aggatcctggccaagaggcatccggagctgcgcgtcaactgcg 930 |||||||||||||||||||| |||||| ||||| ||||||||| Sbjct: 6130 aggatcctggccaagaggcacccggagatgcgcatcaactgcg 6172
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 61.9 bits (31), Expect = 5e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 888 aggatcctggccaagaggcatccggagctgcgcgtcaactgcg 930 |||||||||||||||||||| |||||| ||||| ||||||||| Sbjct: 18969 aggatcctggccaagaggcacccggagatgcgcatcaactgcg 19011
>dbj|AK064532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-H04, full insert sequence Length = 1310 Score = 61.9 bits (31), Expect = 5e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 888 aggatcctggccaagaggcatccggagctgcgcgtcaactgcg 930 |||||||||||||||||||| |||||| ||||| ||||||||| Sbjct: 961 aggatcctggccaagaggcacccggagatgcgcatcaactgcg 1003
>tpg|BK001744.1| TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 909 ccggagctgcgcgtcaactgcgcgcac 935 |||||||||||||||||| |||||||| Sbjct: 68928 ccggagctgcgcgtcaacggcgcgcac 68954
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 769 tggacgagctgctggccatgttc 791 ||||||||||||||||||||||| Sbjct: 1079315 tggacgagctgctggccatgttc 1079293
>ref|XM_572094.1| Cryptococcus neoformans var. neoformans JEC21 protein kinase (CNG03850) partial mRNA Length = 3907 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 769 tggacgagctgctggccatgttc 791 ||||||||||||||||||||||| Sbjct: 3273 tggacgagctgctggccatgttc 3295
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 766 ggctggacgagctgctggccatg 788 ||||||||||||||||||||||| Sbjct: 287222 ggctggacgagctgctggccatg 287244
>ref|XM_309861.2| Anopheles gambiae str. PEST ENSANGP00000018238 (ENSANGG00000015749), partial mRNA Length = 999 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 720 gagctgaagaaggagctgaacga 742 ||||||||||||||||||||||| Sbjct: 565 gagctgaagaaggagctgaacga 587
>ref|XM_564094.1| Anopheles gambiae str. PEST ENSANGP00000029217 (ENSANGG00000015749), partial mRNA Length = 1208 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 720 gagctgaagaaggagctgaacga 742 ||||||||||||||||||||||| Sbjct: 508 gagctgaagaaggagctgaacga 530
>gb|L00676.1|SH1ULGNS Pseudorabies virus (Suid herpesvirus 1) UL18 through UL21 genes, complete cds and UL15 gene, 3' end Length = 9382 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 909 ccggagctgcgcgtcaactgcgcgcac 935 |||||||||||||||||| |||||||| Sbjct: 5196 ccggagctgcgcgtcaacggcgcgcac 5222
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 968 ctccgggatcctgacgccggaggagg 993 ||||||||||||||||||| |||||| Sbjct: 288600 ctccgggatcctgacgccgcaggagg 288625
>ref|XR_026876.1| PREDICTED: Gallus gallus hypothetical LOC430610 (LOC430610), mRNA Length = 1745 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 717 gaggagctgaagaaggagctg 737 ||||||||||||||||||||| Sbjct: 820 gaggagctgaagaaggagctg 840
>ref|XM_001217988.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_09367) mRNA, complete cds Length = 2847 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 ctgaacgacgtcgacagcctg 755 ||||||||||||||||||||| Sbjct: 219 ctgaacgacgtcgacagcctg 199
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 198 gtggtcaccggtgggagcaaagggatcgg 226 ||||||||||| |||||||| |||||||| Sbjct: 6007790 gtggtcaccggcgggagcaaggggatcgg 6007762
>ref|XM_370143.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06640.4) partial mRNA Length = 666 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 715 acgaggagctgaagaaggagc 735 ||||||||||||||||||||| Sbjct: 296 acgaggagctgaagaaggagc 316
>gb|AC063922.23| Homo sapiens 3 BAC RP11-315A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 97817 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1140 aataatctgtgagttgaagaa 1160 ||||||||||||||||||||| Sbjct: 87834 aataatctgtgagttgaagaa 87854
>gb|AC027510.7| Homo sapiens chromosome 18, clone RP11-118I2, complete sequence Length = 159205 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 atcctggtgaataatgccgct 449 ||||||||||||||||||||| Sbjct: 71304 atcctggtgaataatgccgct 71284
>gb|AC105104.7| Homo sapiens chromosome 18, clone RP11-909J22, complete sequence Length = 131296 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 atcctggtgaataatgccgct 449 ||||||||||||||||||||| Sbjct: 104878 atcctggtgaataatgccgct 104858
>emb|AL138762.20| Human DNA sequence from clone RP11-179B2 on chromosome 10, complete sequence Length = 113297 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 gatctgtggctgggagctcacactt 129 |||||||||||||| |||||||||| Sbjct: 61581 gatctgtggctgggggctcacactt 61557
>emb|AJ538832.1|NTA538832 Nicotiana tabacum cDNA-AFLP-fragment BT1-M44-017 Length = 285 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 417 gggaagcttgacatcctggtgaataatgc 445 ||||||||||||||||| || |||||||| Sbjct: 31 gggaagcttgacatcctcgtaaataatgc 59
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 806 ggccggcgcggtggaggcgcacggg 830 ||||||||||| ||||||||||||| Sbjct: 1509607 ggccggcgcggcggaggcgcacggg 1509631
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 767 gctggacgagctgctggccat 787 ||||||||||||||||||||| Sbjct: 3181351 gctggacgagctgctggccat 3181371 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 181,826,093 Number of extensions: 9759413 Number of successful extensions: 218419 Number of sequences better than 10.0: 38 Number of HSP's gapped: 218404 Number of HSP's successfully gapped: 123 Length of query: 1197 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1174 Effective length of database: 18,503,978,556 Effective search space: 21723670824744 Effective search space used: 21723670824744 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
