ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf82n11 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os04g47690:12004.t04293:unspliced-genomic HMG1/2-like protein, putative, expressed| Length = 2966 Score = 46.4 bits (95), Expect(7) = 6e-27 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = -3 / -3 Query: 325 LVTAATPFASGCFSMYCGLNSA 260 ++TAATP GCFSMYCGLNSA Sbjct: 594 VLTAATPLVFGCFSMYCGLNSA 529 Score = 42.3 bits (86), Expect(7) = 6e-27 Identities = 15/19 (78%), Positives = 15/19 (78%) Frame = -1 / -3 Query: 513 HHPQRQTWTCQNLLPPHQH 457 HHPQ QT TCQNLLPP H Sbjct: 2454 HHPQHQTSTCQNLLPPVPH 2398 Score = 41.8 bits (85), Expect(7) = 6e-27 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = -1 / -2 Query: 708 FRLFFATSQTETPPACRRPGV 646 F +FFATS TETPPAC PGV Sbjct: 2773 FSIFFATS*TETPPACHGPGV 2711 Score = 29.9 bits (59), Expect(7) = 6e-27 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 / -3 Query: 754 VSTCCGGPRKISSQGF*AF 698 V TCCGG +K SSQ + AF Sbjct: 2820 VYTCCGGSQKKSSQQYSAF 2764 Score = 29.0 bits (57), Expect(7) = 6e-27 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -3 / -3 Query: 355 DMLRHFSPAALVT 317 D+ RHFSPAALVT Sbjct: 723 DIARHFSPAALVT 685 Score = 26.7 bits (52), Expect(7) = 6e-27 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = -3 / -3 Query: 817 INSKPTAG*SSDQ*IKTSIIT 755 IN KP A *SSDQ*I + T Sbjct: 2874 INRKPIAD*SSDQ*ISKIVYT 2812 Score = 24.0 bits (46), Expect(7) = 6e-27 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -2 / -3 Query: 587 KP*AARADLHHCCS 546 KP*A DLH C S Sbjct: 2646 KP*AVNTDLHSCSS 2605 Score = 47.8 bits (98), Expect(8) = 6e-25 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = +1 / +2 Query: 613 CNVM*GECLDAYSWSAACWRSLCLTSSEEKPKTLDCLSFVD 735 C V+ C YSW+ ACWR LCLTSSEE + L F + Sbjct: 2678 CPVVRKTCE*RYSWAVACWRCLCLTSSEENAEYC*LLFFCE 2800 Score = 37.3 bits (75), Expect(8) = 6e-25 Identities = 15/18 (83%), Positives = 17/18 (94%) Frame = +2 / +1 Query: 260 G*VQAAVHGEAPRGKGRR 313 G*VQAAVHGEAP+ +GRR Sbjct: 529 G*VQAAVHGEAPKHQGRR 582 Score = 36.8 bits (74), Expect(8) = 6e-25 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +2 / +2 Query: 209 RRRRQAEARPDPLLRLP 259 RRRRQA+ARP P+LRLP Sbjct: 353 RRRRQAQARPHPVLRLP 403 Score = 26.3 bits (51), Expect(8) = 6e-25 Identities = 14/18 (77%), Positives = 15/18 (83%) Frame = +2 / +2 Query: 458 C**GGRRF*QVQV*R*G* 511 C GGRRF*QV+V* *G* Sbjct: 2399 CGTGGRRF*QVEV*C*G* 2452 Score = 26.3 bits (51), Expect(8) = 6e-25 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +3 / +2 Query: 714 *LLIFRGPPQHVETVIML 767 *LL F PPQHV T++++ Sbjct: 2780 *LLFFCEPPQHV*TILLI 2833 Score = 25.8 bits (50), Expect(8) = 6e-25 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = +1 / +3 Query: 322 PRRPGRSGAAC 354 PR PGRSGA C Sbjct: 690 PRLPGRSGALC 722 Score = 25.4 bits (49), Expect(8) = 6e-25 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +3 / +3 Query: 363 EKAKYGGKKAD 395 EKA+YGGKK D Sbjct: 2196 EKAQYGGKKPD 2228 Score = 24.0 bits (46), Expect(8) = 6e-25 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +3 / +2 Query: 765 LVFIYWSDD*PAVGLLLI 818 ++ I+ SDD* A+G LLI Sbjct: 2822 ILLIH*SDD*SAIGFLLI 2875 Score = 37.7 bits (76), Expect(7) = 3e-17 Identities = 17/26 (65%), Positives = 19/26 (73%) Frame = +2 / +3 Query: 647 TPGLRHAGGVSV*LVAKKSLKPLTAY 724 TPG HAGGVSV*LVAKK L + + Sbjct: 2712 TPGPWHAGGVSV*LVAKKMLNTVDCF 2789 Score = 35.4 bits (71), Expect(7) = 3e-17 Identities = 14/22 (63%), Positives = 14/22 (63%) Frame = +3 / +3 Query: 210 GGVAKPKRAPTPFFVFLAEFRP 275 GG KPKR TPFF FL F P Sbjct: 354 GGAGKPKRGLTPFFAFL*AFPP 419 Score = 34.5 bits (69), Expect(7) = 3e-17 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +3 / +2 Query: 261 AEFRPQYMEKHP 296 AEFRPQYMEKHP Sbjct: 530 AEFRPQYMEKHP 565 Score = 27.2 bits (53), Expect(7) = 3e-17 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +1 / +3 Query: 709 TLDCLSFVDLRSMWK 753 T+DC SF +LRSM K Sbjct: 2775 TVDCFSFANLRSMCK 2819 Score = 24.4 bits (47), Expect(7) = 3e-17 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +1 / +1 Query: 472 KKVLTSPSLTLRMM 513 +KVLTS SL LRMM Sbjct: 2413 EKVLTSRSLMLRMM 2454 Score = 24.0 bits (46), Expect(7) = 3e-17 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2 / +1 Query: 773 YLLV**LARCWLAVN 817 Y L+**L R WL+VN Sbjct: 2830 YSLI**LVRDWLSVN 2874 Score = 22.1 bits (42), Expect(7) = 3e-17 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +3 / +2 Query: 339 KWRSMSDE 362 KWR+MSDE Sbjct: 707 KWRAMSDE 730 Score = 48.3 bits (99), Expect(3) = 5e-10 Identities = 25/50 (50%), Positives = 27/50 (54%) Frame = -2 / -3 Query: 734 STKDKQSRVLGFSSLLVKQRLLQHAADQEYASKHSPHITLHHKDIDMAAK 585 S K + FSSLLVKQR LQHA QEY H T H+KD AK Sbjct: 2799 SQKKSSQQYSAFSSLLVKQRHLQHATAQEYLHSHVFLTTGHNKDNSNIAK 2650 Score = 31.8 bits (63), Expect(3) = 5e-10 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -2 / -2 Query: 311 DALCLGVLLHVLRPELS 261 DAL + VLLHVLRPELS Sbjct: 580 DALGVWVLLHVLRPELS 530 Score = 28.6 bits (56), Expect(3) = 5e-10 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -2 / -2 Query: 356 RHAAPLLPGRLGN 318 RH+APLLPG LG+ Sbjct: 724 RHSAPLLPGSLGH 686 Score = 36.8 bits (74), Expect(3) = 2e-05 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = -3 / -1 Query: 700 FLRY*SNRDSSSMPQTRSTHL 638 FLRY* NRD+SSMP+ RST + Sbjct: 2765 FLRY*LNRDTSSMPRPRSTFI 2703 Score = 28.1 bits (55), Expect(3) = 2e-05 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -2 / -2 Query: 758 NGFHMLRRSTKDKQSRV 708 N HMLRR K+KQS V Sbjct: 2824 NSLHMLRRFAKEKQSTV 2774 Score = 27.6 bits (54), Expect(3) = 2e-05 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 / -1 Query: 294 GASPCTAA*TQ 262 GASPCTAA*TQ Sbjct: 563 GASPCTAA*TQ 531 Score = 32.7 bits (65), Expect(2) = 0.054 Identities = 19/35 (54%), Positives = 23/35 (65%) Frame = +3 / +1 Query: 603 VLMM*CYVRRMFRCVLLVCGMLEESLFD**RRKA* 707 +L+M C + VLL GMLE SLF+**RRK * Sbjct: 2668 ILVMSCCKENVRMKVLLGRGMLEVSLFN**RRKC* 2772 Score = 23.5 bits (45), Expect(2) = 0.054 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 / +1 Query: 713 LTAYLSWTSAACGNRY 760 LTA+L TSAAC N + Sbjct: 2779 LTAFLLRTSAACVNYF 2826
>LOC_Os02g44930:12002.t04083:unspliced-genomic HMG1/2-like protein, putative, expressed| Length = 1939 Score = 29.5 bits (58), Expect(3) = 0.005 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 / -2 Query: 510 HPQRQTWTCQNLLPPH 463 H + QTWTCQ+LL H Sbjct: 1251 HRRPQTWTCQSLLHHH 1204 Score = 27.6 bits (54), Expect(3) = 0.005 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -3 / -2 Query: 355 DMLRHFSPAALVT 317 D+ RHFSPAAL+T Sbjct: 711 DIARHFSPAALLT 673 Score = 25.4 bits (49), Expect(3) = 0.005 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 322 VTAATPFASGCFSMYCGLNS 263 +TAAT SGC + Y LNS Sbjct: 588 LTAATLLLSGCAAWYSCLNS 529 Score = 26.7 bits (52), Expect(2) = 6.5 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +3 / +2 Query: 222 KPKRAPTPFFVFL 260 KPKR P+ FFVF+ Sbjct: 353 KPKRPPSAFFVFM 391 Score = 22.1 bits (42), Expect(2) = 6.5 Identities = 7/17 (41%), Positives = 10/17 (58%) Frame = +3 / +2 Query: 246 FFVFLAEFRPQYMEKHP 296 F+ +EFR +Y HP Sbjct: 512 FYFCRSEFRQEYQAAHP 562
>LOC_Os08g01100:12008.t00010:unspliced-genomic HMG1/2-like protein, putative, expressed| Length = 1370 Score = 38.6 bits (78), Expect = 0.058 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +3 / +2 Query: 261 AEFRPQYMEKHPXXXXXXXXXXXXXXKWRSMSDEEKAKYGGKKAD 395 ++FR +Y +HP +W+SMSDE+K Y K A+ Sbjct: 611 SDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAE 745 Score = 34.5 bits (69), Expect = 1.0 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = -2 / -2 Query: 356 RHAAPLLPGRLGNGSDALCLGVLLHVLRPELS 261 RH P LP LG+ DAL + VL VL PE++ Sbjct: 706 RHGFPPLPSFLGDSGDALVVRVLRLVLLPEVT 611
>LOC_Os01g65380:12001.t05904:unspliced-genomic patellin-5, putative, expressed| Length = 3162 Score = 38.6 bits (78), Expect = 0.058 Identities = 20/37 (54%), Positives = 25/37 (67%) Frame = -3 / -3 Query: 685 SNRDSSSMPQTRSTHLNILLT*HYIIRTLTWQLSPKQ 575 S+R SS +PQ S+ LN HYII TL++QLS KQ Sbjct: 2998 SSRYSSVLPQFLSSALNKPSRCHYIISTLSFQLSQKQ 2888
>LOC_Os08g37810:12008.t03517:unspliced-genomic expressed protein| Length = 1649 Score = 36.8 bits (74), Expect(2) = 0.14 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +2 / +2 Query: 5 RPLHHHTSHSPPFVVLPRLIPSAPQSAA 88 RP HHH H P P LIP P+SA+ Sbjct: 233 RPPHHHHHHPYPSSASPHLIPPTPESAS 316 Score = 21.7 bits (41), Expect(2) = 0.14 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +2 / +2 Query: 296 RGKGRRCRYQGGR 334 RG+ RCR GGR Sbjct: 434 RGRRGRCRSGGGR 472
>LOC_Os06g51220:12006.t04805:unspliced-genomic DNA-binding protein MNB1B, putative, expressed| Length = 2029 Score = 37.3 bits (75), Expect = 0.15 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +3 / +1 Query: 156 KANGDAAFKASGKSKTATGGVAKPKRAPTPFFVFLAEFRPQYM 284 K+ G A G+ A KPKRAP+ FFVF+++ P ++ Sbjct: 436 KSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMSDHFPDFL 564
>LOC_Os01g37690:12001.t03309:unspliced-genomic vacuolar cation/proton exchanger 1a, putative, expressed| Length = 5361 Score = 27.6 bits (54), Expect(3) = 0.87 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +1 / +3 Query: 295 PRQRASLPLPRRPGR 339 PR +A PLPRRP R Sbjct: 384 PRHQARRPLPRRPAR 428 Score = 25.8 bits (50), Expect(3) = 0.87 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +1 / +2 Query: 655 SAACWRSLCLTSSEEKPKTLDCLS 726 +++CWR TSS +T C S Sbjct: 3182 ASSCWRPTSPTSSSSSRRTASCSS 3253 Score = 23.5 bits (45), Expect(3) = 0.87 Identities = 6/13 (46%), Positives = 9/13 (69%) Frame = +2 / +3 Query: 731 WTSAACGNRYYAC 769 W+ A C NR++ C Sbjct: 4215 WSLAGCTNRFHEC 4253
>LOC_Os09g29950:12009.t02673:unspliced-genomic protease 2, putative, expressed| Length = 7077 Score = 34.5 bits (69), Expect = 1.0 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = +2 / -3 Query: 290 APRGKGRRCRYQGGRG 337 APRG+GRRCR GRG Sbjct: 283 APRGRGRRCRASSGRG 236
>LOC_Os08g32870:12008.t03030:unspliced-genomic betaine-aldehyde dehydrogenase, putative, expressed| Length = 6268 Score = 34.1 bits (68), Expect = 1.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -2 / -2 Query: 821 NN*QQANSGLVIRPVDKNKHNNGFHMLRRSTK 726 +N* Q+NS LV R KH N H+L R+ + Sbjct: 1077 SN*YQSNSDLVTRTCQLTKHTNNIHLLLRTNQ 982
>LOC_Os04g29210:12004.t02615:unspliced-genomic FAD binding domain containing protein, putative| Length = 1837 Score = 34.1 bits (68), Expect = 1.4 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +2 / +3 Query: 209 RRRRQAEARPDPLLRLPG*VQAAVHGEAPRGKGRRCR 319 RRR P P +R G AA G PRG+ RR R Sbjct: 765 RRRHGRRVGPPPRVRRRGVAAAAARGRVPRGRPRRRR 875
>LOC_Os12g05210:12012.t00410:unspliced-genomic expressed protein| Length = 823 Score = 33.6 bits (67), Expect = 1.9 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = +2 / +2 Query: 203 GHRRRRQAEARPDPLLRLPG*VQAAVHGEAPRGKGRRCRYQGGR 334 G R+ R+ AR P P Q G PR +GRR R GGR Sbjct: 407 GPRQHRRQPARSPPGRHRPQRPQLRGGGRRPRARGRRRRRGGGR 538
>LOC_Os10g28200:12010.t02174:unspliced-genomic GDP-mannose 3,5-epimerase 1, putative, expressed| Length = 3325 Score = 33.6 bits (67), Expect = 1.9 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 / +3 Query: 8 PLHHHTSHSPPFVVLPRLIPSAPQSAA 88 P HHH PP+ +LP L S P++AA Sbjct: 21 PSHHHHHPPPPYPLLPPLSLSPPRAAA 101
>LOC_Os03g03410:12003.t00223:unspliced-genomic BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor, putative, expressed Length = 3934 Score = 33.6 bits (67), Expect = 1.9 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 / +1 Query: 206 HRRRRQAEARPDPLLRLP 259 HRRRR+ ARP P LRLP Sbjct: 283 HRRRRRHRARPGPRLRLP 336
>LOC_Os03g28130:12003.t02486:unspliced-genomic F-box protein, putative, expressed| Length = 1537 Score = 33.1 bits (66), Expect = 2.6 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 / +3 Query: 203 GHRRRRQAEARPDPLLRLPG*VQAAVHGEAPR 298 G +RRR+ RP ++R P + A HG APR Sbjct: 396 GRQRRRRRRRRPGGVVRRPRPLPRAGHGRAPR 491
>LOC_Os03g29584:12003.t02578:unspliced-genomic expressed protein| Length = 5261 Score = 32.2 bits (64), Expect(2) = 3.1 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 / -3 Query: 8 PLHHHTSHSPPFVVLPRLIPSAPQSAAV 91 PL+H T HS P + P +PS+ QS V Sbjct: 1116 PLNHKTRHSSPQLCKPDELPSSTQSTVV 1033 Score = 23.1 bits (44), Expect(2) = 3.1 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +2 / -2 Query: 260 G*VQAAVHGEAPRGKGRRCR 319 G +A G RG+G RCR Sbjct: 727 GSTRARERGVTARGRGSRCR 668
>LOC_Os04g30250:12004.t02712:unspliced-genomic wall-associated kinase-like 1, putative, expressed| Length = 4495 Score = 27.6 bits (54), Expect(2) = 3.4 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +3 / +3 Query: 150 RSKANGDAAFKASGKSKTATGGVAKPKRAPTP 245 R G AA SG+ + A A+P+R P P Sbjct: 2304 RQIRTGRAAAGGSGRGRAAAVAHARPRRGPRP 2399 Score = 22.1 bits (42), Expect(2) = 3.4 Identities = 8/15 (53%), Positives = 8/15 (53%) Frame = +2 / +1 Query: 14 HHHTSHSPPFVVLPR 58 HHH H PP V R Sbjct: 2212 HHHR*HCPPPVTARR 2256
>LOC_Os02g36110:12002.t03248:unspliced-genomic cytochrome P450 76C2, putative, expressed| Length = 1727 Score = 32.7 bits (65), Expect = 3.6 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +2 / +3 Query: 269 QAAVHGEAPRGKGRRCRYQGGRG 337 Q HGE RG RR R +GGRG Sbjct: 993 QPGHHGEGARGAERRARREGGRG 1061
>LOC_Os02g32440:12002.t02887:unspliced-genomic hypothetical protein| Length = 1185 Score = 32.7 bits (65), Expect = 3.6 Identities = 17/30 (56%), Positives = 17/30 (56%) Frame = +2 / +3 Query: 200 DGHRRRRQAEARPDPLLRLPG*VQAAVHGE 289 DG RRRR A ARP P G*V AA E Sbjct: 633 DGGRRRRSARARPPPRPPRRG*VVAAAEPE 722
>LOC_Os08g43334:12008.t04058:unspliced-genomic heat shock factor protein 7, putative, expressed| Length = 9575 Score = 32.7 bits (65), Expect = 3.6 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 / +2 Query: 75 GAEGMRRGRTTKGGECDVWWWSGLV 1 G +G RR +GG D+W W GL+ Sbjct: 3449 GDDGQRRYAQCRGGWGDIWRWGGLI 3523
>LOC_Os03g22590:12003.t02009:unspliced-genomic MTN3, putative, expressed| Length = 3430 Score = 29.0 bits (57), Expect(2) = 3.8 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +2 / -2 Query: 209 RRRRQAEARPDPLLRLPG*VQAAVHGEAPRGKGRR 313 RRRR+ R P PG AA G P+ GRR Sbjct: 2862 RRRRRRRRRAAPPPATPGAASAAAAGP*PQPAGRR 2758 Score = 25.4 bits (49), Expect(2) = 3.8 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +1 / -1 Query: 682 LTSSEEKPKTLDCLSFVDLRSMWKPLLCLFLSTG 783 L SS K K C+ L +WKPL+ L G Sbjct: 337 LVSSSGKLKYNACMHGCILYLLWKPLILLHARCG 236
>LOC_Os05g44720:12005.t03960:unspliced-genomic spidroin 1, putative| Length = 1752 Score = 29.5 bits (58), Expect(2) = 3.9 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = +1 / -2 Query: 310 SLPLPRRPGRSGAA 351 SLPLPRRP RS AA Sbjct: 239 SLPLPRRPPRSAAA 198 Score = 24.0 bits (46), Expect(2) = 3.9 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = +1 / -3 Query: 7 ATPPPHVAFSPFR 45 A+P P ++FSPFR Sbjct: 691 ASPAPPLSFSPFR 653
>LOC_Os09g37910:12009.t03265:unspliced-genomic HMG1/2-like protein, putative, expressed| Length = 2118 Score = 26.7 bits (52), Expect(2) = 4.8 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +3 / +1 Query: 222 KPKRAPTPFFVFL 260 KPKR P+ FFVF+ Sbjct: 424 KPKRPPSAFFVFM 462 Score = 22.6 bits (43), Expect(2) = 4.8 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = +3 / +2 Query: 264 EFRPQYMEKHP 296 +FR Y EKHP Sbjct: 560 QFRKDYKEKHP 592
>LOC_Os08g29854:12008.t02738:unspliced-genomic RGH1A, putative, expressed| Length = 13173 Score = 32.2 bits (64), Expect = 5.0 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +2 / -3 Query: 236 PDPLLRLPG*VQAAVHGEAPRGKGRRCRYQGGRGE 340 P LL LP G R + RRCR +GG GE Sbjct: 2080 PHCLLPLPSTADRWARGRGGRWRQRRCRREGGGGE 1976
>LOC_Os05g05740:12005.t00464:unspliced-genomic proline synthetase co-transcribed bacterial homolog protein,| putative, expressed Length = 3003 Score = 32.2 bits (64), Expect = 5.0 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +3 / +2 Query: 183 ASGKSKTATGGVAKPKRAPTPFFVFLAEFRPQYM 284 A+ T+ +P R P+P+ FLAE P Y+ Sbjct: 173 AASGRTTSRSSSTRPPRFPSPYLAFLAELSPFYL 274
>LOC_Os09g10960:12009.t00886:unspliced-genomic SWP, putative, expressed| Length = 11395 Score = 32.2 bits (64), Expect = 5.0 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 / +3 Query: 87 AADWGAEGMRRGRTTKGGECDVWWWSGLV 1 AA+ EG R + G C WWW G + Sbjct: 222 AAEAAGEGRGRISGSSAGACGHWWWVGFI 308
>LOC_Os11g34540:12011.t03006:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1236 Score = 29.5 bits (58), Expect(2) = 5.1 Identities = 11/34 (32%), Positives = 15/34 (44%) Frame = +3 / +3 Query: 186 SGKSKTATGGVAKPKRAPTPFFVFLAEFRPQYME 287 +G GG+ P R P P F A P +M+ Sbjct: 798 TGAESQLRGGIPHPPRCPPPLLRFRARQHPDHMQ 899 Score = 23.1 bits (44), Expect(2) = 5.1 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +2 / +2 Query: 290 APRGKGRRCRYQGGRG 337 +PRG+G CR Q G Sbjct: 1085 SPRGRGGACRQQAPGG 1132
>LOC_Os02g19950:12002.t01787:unspliced-genomic hypothetical protein| Length = 4435 Score = 31.3 bits (62), Expect(2) = 6.4 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = -2 / -3 Query: 791 VIRPVDKNKHNNGFHMLRRSTKDKQSRVLGFSSLLVKQRLLQH 663 +I P K HN +++ ++K ++ + F L +Q+LLQH Sbjct: 3281 LI*PFQKTNHNKIREFFKKNRQNKVAKDMLFCHFLFQQKLLQH 3153 Score = 22.6 bits (43), Expect(2) = 6.4 Identities = 5/6 (83%), Positives = 5/6 (83%) Frame = -1 / -3 Query: 24 VWWWSG 7 VWWW G Sbjct: 53 VWWWDG 36
>LOC_Os04g39030:12004.t03473:unspliced-genomic peptide transporter PTR2, putative| Length = 4196 Score = 31.8 bits (63), Expect = 6.8 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = +2 / +2 Query: 209 RRRRQAEARPDPLLRLPG*VQAAVHGEAPRGKGRRCRYQGGRGE 340 RR R + R P +R P VQA GRR R QGGR + Sbjct: 4043 RRARGGQLRGVPGVREPAPVQAGDTARGGLAAGRRGRGQGGRDD 4174
>LOC_Os02g45310:12002.t04118:unspliced-genomic ankyrin protein kinase-like, putative, expressed| Length = 3795 Score = 31.8 bits (63), Expect = 6.9 Identities = 11/27 (40%), Positives = 12/27 (44%) Frame = -1 / -3 Query: 87 AADWGAEGMRRGRTTKGGECDVWWWSG 7 A W G RRG + G C WW G Sbjct: 229 APRWRWAGRRRGAARRRGRCSAWWPPG 149
>LOC_Os01g49580:12001.t04398:unspliced-genomic protein kinase domain containing protein, expressed| Length = 4473 Score = 31.8 bits (63), Expect = 6.9 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / -2 Query: 628 GECLDAYSWSAACWRSLCLTSSEEKPKTLDCLS 726 G Y+W A+C+RSL +E P + C S Sbjct: 2333 GTLRTGYNWGASCFRSLTTGIPDEVPGRIHCYS 2235
>LOC_Os02g37370:12002.t03375:unspliced-genomic conserved hypothetical protein| Length = 651 Score = 27.2 bits (53), Expect(2) = 6.9 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = -1 / -3 Query: 510 HPQRQTWTCQ 481 HPQRQ W CQ Sbjct: 529 HPQRQPWLCQ 500 Score = 24.0 bits (46), Expect(2) = 6.9 Identities = 5/9 (55%), Positives = 6/9 (66%) Frame = -1 / -3 Query: 33 ECDVWWWSG 7 +C WWW G Sbjct: 502 QCGSWWWPG 476
>LOC_Os06g41630:12006.t03855:unspliced-genomic hypothetical protein| Length = 860 Score = 31.3 bits (62), Expect = 9.4 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = +2 / -2 Query: 245 LLRLPG*VQAAVHGEAPRGKGRRCRYQG 328 LLR P AA GE RGKGRR R +G Sbjct: 109 LLRRPPAPSAAREGERERGKGRRKRGRG 26
>LOC_Os01g55740:12001.t04984:unspliced-genomic expressed protein| Length = 4313 Score = 31.3 bits (62), Expect = 9.4 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -2 / +1 Query: 713 RVLGFSSLLVKQRLLQHAADQEYASKHSPHITLHHKDIDMAAKP 582 R L F SLL +Q L AA + + PH LH AA P Sbjct: 16 RFLQFQSLLAQQALRLRAAPRPKPQPNPPHRFLHAPSSPAAASP 147
>LOC_Os01g27940:12001.t02493:unspliced-genomic cyclin-L2, putative, expressed| Length = 6346 Score = 31.3 bits (62), Expect = 9.4 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 / +3 Query: 20 HTSHSPPFVVLPRLIPSAPQSAA 88 H+SH P +LPR P+AP+S+A Sbjct: 180 HSSHHAPPDLLPRASPAAPRSSA 248
>LOC_Os01g19870:12001.t01776:unspliced-genomic expressed protein| Length = 6060 Score = 31.3 bits (62), Expect = 9.4 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -3 / -3 Query: 82 GLGSGGNETGKDNERGRMR 26 GLG GG+ETG++ ER R R Sbjct: 229 GLGIGGDETGRERERERDR 173
>LOC_Os01g08840:12001.t00762:unspliced-genomic hypothetical protein| Length = 468 Score = 31.3 bits (62), Expect = 9.4 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 / -1 Query: 200 DGHRRRRQAEARPDPLLRLPG*VQAAVHGE 289 DG RRR + + +P PL R G + AV GE Sbjct: 297 DGQRRRERPDGQPQPLPRHGGGRRGAVGGE 208
>LOC_Os12g42150:12012.t03889:unspliced-genomic nucleotide binding protein, putative, expressed| Length = 2188 Score = 31.3 bits (62), Expect = 9.4 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = +1 / -1 Query: 295 PRQRASLPLPRRPGRSG 345 PR RA P PRRP RSG Sbjct: 673 PRSRARSPSPRRPSRSG 623
>LOC_Os10g41310:12010.t03367:unspliced-genomic bZIP-like protein, putative, expressed| Length = 4222 Score = 31.3 bits (62), Expect = 9.4 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 / -3 Query: 676 LCLTSSEEKPKTLDCLSFVDLRSMWKPLLCL 768 LCL S ++ + L + RS+WKP+ CL Sbjct: 3368 LCLLSVDDMDNIHEALDSLRSRSIWKPVQCL 3276
>LOC_Os04g36000:12004.t03270:unspliced-genomic F-box domain containing protein| Length = 3035 Score = 31.3 bits (62), Expect = 9.4 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +1 / +3 Query: 295 PRQRASLPLPRRPGRSGAA 351 P S+PLPRRP R+GAA Sbjct: 1098 PSPLPSVPLPRRPSRAGAA 1154 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 249,877,587 Number of extensions: 3296095 Number of successful extensions: 23137 Number of sequences better than 10.0: 39 Length of query: 286 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 237 Effective length of database: 52,856,264 Effective search space: 12526934568 Effective search space used: 12526934568 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
