ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf79o12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-H07, full insert sequence Length = 2717 Score = 1227 bits (619), Expect = 0.0 Identities = 1056/1201 (87%), Gaps = 3/1201 (0%) Strand = Plus / Plus Query: 262 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggccgtgcggct 321 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 359 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggt 418 Query: 322 ggtggcagacggcaatgcccgcagctccgtcgacgaggaatggctacatcaggatcgatt 381 |||||| | |||||||||| || |||||||| ||||||||| |||||| ||||||| | Sbjct: 419 ggtggcgggcggcaatgccggc---tccgtcgaggaggaatgggtacatccggatcgact 475 Query: 382 gcttcggcgggctcaatcagctgcggcgcgatctgtgcgatggaattgcggttgcacgtc 441 ||| |||||||||||| |||||||| |||||||| || ||||||||||||||||| || | Sbjct: 476 gctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgcgcgcc 535 Query: 442 ttctgaacgcaacaatggttctgcccaagtttgaggttgctgcatactggaacgagtctg 501 |||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct: 536 ttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatcta 595 Query: 502 gtggttttgcagacgtgtttgatgttgatcacttcattgagcaaactagaggttatgtgg 561 |||| ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||| Sbjct: 596 gtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtgg 655 Query: 562 aggtggtcaaggatatgcccgaggagatatcgttgaaagagccatttaaggtcgattgcc 621 | || || ||||| ||||| || |||||| | | |||||||| |||||||| |||||| Sbjct: 656 aagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgca 715 Query: 622 gaaaacggaaaggaaattttgattatgtagaaacagttcttccagctcttttagaacatc 681 | ||||| |||||| |||||||||| || ||||| || ||||||||||| || || |||| Sbjct: 716 gcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatc 775 Query: 682 gatatatttctctaacacctgccatgagccaaagaaaagatagatatccatcacatgcga 741 |||||||| || |||||||||||||||||||||| ||| ||| |||| ||| | |||| Sbjct: 776 agtatatttcactgacacctgccatgagccaaagaagagacagaaatccttcatacgcga 835 Query: 742 aagcttgttactgccaaggttgctacaatgcactccagttgaacaagaaggtagaagcca 801 |||||| |||||||||||| |||||||||||||| | |||| | ||||| || ||| | | Sbjct: 836 aagcttcttactgccaaggctgctacaatgcactgcggttggataagaatgtggaaacaa 895 Query: 802 aagctatgaagcttctccaagcaataccaaaacctttcttatcacttcaccttagatttg 861 ||||||| ||||||||||||| ||||||||||||||||| || |||||||| ||||||| Sbjct: 896 aagctattgagcttctccaagccataccaaaacctttcttgtctcttcacctgagatttg 955 Query: 862 aaccagatatggttgcctacagtcgatgtgaatacagtgccctttcttccaaatcactgg 921 |||||||||||||||||||||||||||||| ||||| || || ||||| |||||||| Sbjct: 956 aaccagatatggttgcctacagtcgatgtgtatacactggtctgtcttctaaatcactca 1015 Query: 922 atgcgattgaagctgcacgtggggaggacaggaatgtattgattggtgatgctgctcatc 981 ||| ||||||||||||||||||||||||||||| | ||||| |||||| ||||| | || Sbjct: 1016 gtgcaattgaagctgcacgtggggaggacaggaaggcattgactggtgaggctgcccttc 1075 Query: 982 tgtggaggaaccgtggaaagtgccctctaacaccaagtgaaacagcatttatcctccaag 1041 |||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1076 tgtggaggaaccgtggcaagtgccctctaacaccaagtgaaacagcatttatacttaaag 1135 Query: 1042 cactaggtattcctacagagacaaacatttatttagctgctggggatgggctaatggaac 1101 || ||||||| || ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 1136 cattaggtatccccacagacacaaacatttatttagctgctggcgatgggctaatggaac 1195 Query: 1102 tcgagggcttcacttcgatctacaaaaatatgtatactaaatcgtctctcctgactcatg 1161 | |||||||||||||| || ||||||||||| || |||||||| || ||||| ||||||| Sbjct: 1196 ttgagggcttcacttccatttacaaaaatatatacactaaatcatccctcctaactcatg 1255 Query: 1162 aggattttgagaggatgcatggcaacacaaaagctgttctcgactactatgtttcagtca 1221 | |||||||||| |||||||||||| |||||||||| ||| || |||||||||||||||| Sbjct: 1256 atgattttgagaagatgcatggcaatacaaaagctgctcttgattactatgtttcagtca 1315 Query: 1222 acagcgatgcttatgttgccacgttctttggaaatatggataagatggtaactgcaatga 1281 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 1316 gcagtgatgcttatgttgccaccttctttggaaatatggataagatggtaactgcgatga 1375 Query: 1282 gaacaatgcaagggctacagaagacattggtcttgagtaggagggccttcgcaaactaca 1341 ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1376 gaacaatgcaagggcaccagaagactctggtcttgagtaggagggcctatgcaaactaca 1435 Query: 1342 cggctgctggactggcaggagaccaactagctaaggccatgtgggatgctcatcgagagg 1401 | |||| |||||| |||| || |||||||||| ||||||||||||||| |||||||||| Sbjct: 1436 cagctgttggactttcaggggagcaactagctatggccatgtgggatgcccatcgagagg 1495 Query: 1402 attatattctggggaggggattagctctccctgaacattgcttccgtgagttcaagttgt 1461 | ||||| |||||||||||| ||| || ||||| || |||||| |||||||||| |||| Sbjct: 1496 aatatatcatggggaggggatcagcccttcctgagcagtgcttctgtgagttcaaattgt 1555 Query: 1462 a 1462 | Sbjct: 1556 a 1556 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 cgatcagatccagtgcttctcg 85 |||||||||||||||||||||| Sbjct: 164 cgatcagatccagtgcttctcg 185
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 787 bits (397), Expect = 0.0 Identities = 643/725 (88%) Strand = Plus / Plus Query: 738 gcgaaagcttgttactgccaaggttgctacaatgcactccagttgaacaagaaggtagaa 797 |||||||||| |||||||||||| |||||||||||||| | |||||| ||||| || ||| Sbjct: 26883069 gcgaaagcttcttactgccaaggctgctacaatgcactgcggttgaataagaatgtggaa 26883128 Query: 798 gccaaagctatgaagcttctccaagcaataccaaaacctttcttatcacttcaccttaga 857 | |||||||| ||||||||||||| ||||||||||||||||| || |||||||| ||| Sbjct: 26883129 acaaaagctattgagcttctccaagccataccaaaacctttcttgtctcttcacctgaga 26883188 Query: 858 tttgaaccagatatggttgcctacagtcgatgtgaatacagtgccctttcttccaaatca 917 |||||||||||||||||||||||||||||||||| ||||| || || ||||| |||||| Sbjct: 26883189 tttgaaccagatatggttgcctacagtcgatgtgtatacactggtctgtcttctaaatca 26883248 Query: 918 ctggatgcgattgaagctgcacgtggggaggacaggaatgtattgattggtgatgctgct 977 || ||| ||||||||||||||||||||||||||||| | ||||| |||||| ||||| Sbjct: 26883249 ctcagtgcaattgaagctgcacgtggggaggacaggaaggcattgactggtgaggctgcc 26883308 Query: 978 catctgtggaggaaccgtggaaagtgccctctaacaccaagtgaaacagcatttatcctc 1037 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 26883309 cttctgtggaggaaccgtggcaagtgccctctaacaccaagtgaaacagcatttatactt 26883368 Query: 1038 caagcactaggtattcctacagagacaaacatttatttagctgctggggatgggctaatg 1097 ||||| ||||||| || ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 26883369 aaagcattaggtatccccacagacacaaacatttatttagctgctggcgatgggctaatg 26883428 Query: 1098 gaactcgagggcttcacttcgatctacaaaaatatgtatactaaatcgtctctcctgact 1157 ||||| |||||||||||||| || ||||||||||| || |||||||| || ||||| ||| Sbjct: 26883429 gaacttgagggcttcacttccatttacaaaaatatatacactaaatcatccctcctaact 26883488 Query: 1158 catgaggattttgagaggatgcatggcaacacaaaagctgttctcgactactatgtttca 1217 ||||| |||||||||| |||||||||||| |||||||||| ||| || |||||||||||| Sbjct: 26883489 catgatgattttgagaagatgcatggcaatacaaaagctgctcttgattactatgtttca 26883548 Query: 1218 gtcaacagcgatgcttatgttgccacgttctttggaaatatggataagatggtaactgca 1277 |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 26883549 gtcagcagtgatgcttatgttgccaccttctttggaaatatggataagatggtaactgcg 26883608 Query: 1278 atgagaacaatgcaagggctacagaagacattggtcttgagtaggagggccttcgcaaac 1337 ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| Sbjct: 26883609 atgagaacaatgcaagggcaccagaagactctggtcttgagtaggagggcctatgcaaac 26883668 Query: 1338 tacacggctgctggactggcaggagaccaactagctaaggccatgtgggatgctcatcga 1397 ||||| |||| |||||| |||| || |||||||||| ||||||||||||||| |||||| Sbjct: 26883669 tacacagctgttggactttcaggggagcaactagctatggccatgtgggatgcccatcga 26883728 Query: 1398 gaggattatattctggggaggggattagctctccctgaacattgcttccgtgagttcaag 1457 ||||| ||||| |||||||||||| ||| || ||||| || |||||| |||||||||| Sbjct: 26883729 gaggaatatatcatggggaggggatcagcccttcctgagcagtgcttctgtgagttcaaa 26883788 Query: 1458 ttgta 1462 ||||| Sbjct: 26883789 ttgta 26883793 Score = 174 bits (88), Expect = 8e-40 Identities = 184/216 (85%) Strand = Plus / Plus Query: 502 gtggttttgcagacgtgtttgatgttgatcacttcattgagcaaactagaggttatgtgg 561 |||| ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||| Sbjct: 26881785 gtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtgg 26881844 Query: 562 aggtggtcaaggatatgcccgaggagatatcgttgaaagagccatttaaggtcgattgcc 621 | || || ||||| ||||| || |||||| | | |||||||| |||||||| |||||| Sbjct: 26881845 aagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgca 26881904 Query: 622 gaaaacggaaaggaaattttgattatgtagaaacagttcttccagctcttttagaacatc 681 | ||||| |||||| |||||||||| || ||||| || ||||||||||| || || |||| Sbjct: 26881905 gcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatc 26881964 Query: 682 gatatatttctctaacacctgccatgagccaaagaa 717 |||||||| || |||||||||||||||||||||| Sbjct: 26881965 agtatatttcactgacacctgccatgagccaaagaa 26882000 Score = 125 bits (63), Expect = 7e-25 Identities = 75/79 (94%) Strand = Plus / Plus Query: 262 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggccgtgcggct 321 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 26881017 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggt 26881076 Query: 322 ggtggcagacggcaatgcc 340 |||||| | |||||||||| Sbjct: 26881077 ggtggcgggcggcaatgcc 26881095 Score = 115 bits (58), Expect = 6e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 420 gatggaattgcggttgcacgtcttctgaacgcaacaatggttctgcccaagtttgaggtt 479 ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct: 26881601 gatggaattgcggttgcgcgccttctcaacgcaacaatggttctgcccaagtttgaggtt 26881660 Query: 480 gctgcatactggaa 493 ||||| |||||||| Sbjct: 26881661 gctgcctactggaa 26881674 Score = 87.7 bits (44), Expect = 1e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 342 gcagctccgtcgacgaggaatggctacatcaggatcgattgcttcggcgggctcaatcag 401 ||||||||||||| ||||||||| |||||| ||||||| |||| |||||||||||| ||| Sbjct: 26881203 gcagctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccag 26881262 Query: 402 ctgcggcgcgat 413 ||||| |||||| Sbjct: 26881263 ctgcgacgcgat 26881274 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 cgatcagatccagtgcttctcg 85 |||||||||||||||||||||| Sbjct: 26880734 cgatcagatccagtgcttctcg 26880755
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 787 bits (397), Expect = 0.0 Identities = 643/725 (88%) Strand = Plus / Plus Query: 738 gcgaaagcttgttactgccaaggttgctacaatgcactccagttgaacaagaaggtagaa 797 |||||||||| |||||||||||| |||||||||||||| | |||||| ||||| || ||| Sbjct: 145859 gcgaaagcttcttactgccaaggctgctacaatgcactgcggttgaataagaatgtggaa 145918 Query: 798 gccaaagctatgaagcttctccaagcaataccaaaacctttcttatcacttcaccttaga 857 | |||||||| ||||||||||||| ||||||||||||||||| || |||||||| ||| Sbjct: 145919 acaaaagctattgagcttctccaagccataccaaaacctttcttgtctcttcacctgaga 145978 Query: 858 tttgaaccagatatggttgcctacagtcgatgtgaatacagtgccctttcttccaaatca 917 |||||||||||||||||||||||||||||||||| ||||| || || ||||| |||||| Sbjct: 145979 tttgaaccagatatggttgcctacagtcgatgtgtatacactggtctgtcttctaaatca 146038 Query: 918 ctggatgcgattgaagctgcacgtggggaggacaggaatgtattgattggtgatgctgct 977 || ||| ||||||||||||||||||||||||||||| | ||||| |||||| ||||| Sbjct: 146039 ctcagtgcaattgaagctgcacgtggggaggacaggaaggcattgactggtgaggctgcc 146098 Query: 978 catctgtggaggaaccgtggaaagtgccctctaacaccaagtgaaacagcatttatcctc 1037 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 146099 cttctgtggaggaaccgtggcaagtgccctctaacaccaagtgaaacagcatttatactt 146158 Query: 1038 caagcactaggtattcctacagagacaaacatttatttagctgctggggatgggctaatg 1097 ||||| ||||||| || ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 146159 aaagcattaggtatccccacagacacaaacatttatttagctgctggcgatgggctaatg 146218 Query: 1098 gaactcgagggcttcacttcgatctacaaaaatatgtatactaaatcgtctctcctgact 1157 ||||| |||||||||||||| || ||||||||||| || |||||||| || ||||| ||| Sbjct: 146219 gaacttgagggcttcacttccatttacaaaaatatatacactaaatcatccctcctaact 146278 Query: 1158 catgaggattttgagaggatgcatggcaacacaaaagctgttctcgactactatgtttca 1217 ||||| |||||||||| |||||||||||| |||||||||| ||| || |||||||||||| Sbjct: 146279 catgatgattttgagaagatgcatggcaatacaaaagctgctcttgattactatgtttca 146338 Query: 1218 gtcaacagcgatgcttatgttgccacgttctttggaaatatggataagatggtaactgca 1277 |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 146339 gtcagcagtgatgcttatgttgccaccttctttggaaatatggataagatggtaactgcg 146398 Query: 1278 atgagaacaatgcaagggctacagaagacattggtcttgagtaggagggccttcgcaaac 1337 ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| Sbjct: 146399 atgagaacaatgcaagggcaccagaagactctggtcttgagtaggagggcctatgcaaac 146458 Query: 1338 tacacggctgctggactggcaggagaccaactagctaaggccatgtgggatgctcatcga 1397 ||||| |||| |||||| |||| || |||||||||| ||||||||||||||| |||||| Sbjct: 146459 tacacagctgttggactttcaggggagcaactagctatggccatgtgggatgcccatcga 146518 Query: 1398 gaggattatattctggggaggggattagctctccctgaacattgcttccgtgagttcaag 1457 ||||| ||||| |||||||||||| ||| || ||||| || |||||| |||||||||| Sbjct: 146519 gaggaatatatcatggggaggggatcagcccttcctgagcagtgcttctgtgagttcaaa 146578 Query: 1458 ttgta 1462 ||||| Sbjct: 146579 ttgta 146583 Score = 174 bits (88), Expect = 8e-40 Identities = 184/216 (85%) Strand = Plus / Plus Query: 502 gtggttttgcagacgtgtttgatgttgatcacttcattgagcaaactagaggttatgtgg 561 |||| ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||| Sbjct: 144575 gtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtgg 144634 Query: 562 aggtggtcaaggatatgcccgaggagatatcgttgaaagagccatttaaggtcgattgcc 621 | || || ||||| ||||| || |||||| | | |||||||| |||||||| |||||| Sbjct: 144635 aagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgca 144694 Query: 622 gaaaacggaaaggaaattttgattatgtagaaacagttcttccagctcttttagaacatc 681 | ||||| |||||| |||||||||| || ||||| || ||||||||||| || || |||| Sbjct: 144695 gcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatc 144754 Query: 682 gatatatttctctaacacctgccatgagccaaagaa 717 |||||||| || |||||||||||||||||||||| Sbjct: 144755 agtatatttcactgacacctgccatgagccaaagaa 144790 Score = 125 bits (63), Expect = 7e-25 Identities = 75/79 (94%) Strand = Plus / Plus Query: 262 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggccgtgcggct 321 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 143807 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggt 143866 Query: 322 ggtggcagacggcaatgcc 340 |||||| | |||||||||| Sbjct: 143867 ggtggcgggcggcaatgcc 143885 Score = 115 bits (58), Expect = 6e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 420 gatggaattgcggttgcacgtcttctgaacgcaacaatggttctgcccaagtttgaggtt 479 ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct: 144391 gatggaattgcggttgcgcgccttctcaacgcaacaatggttctgcccaagtttgaggtt 144450 Query: 480 gctgcatactggaa 493 ||||| |||||||| Sbjct: 144451 gctgcctactggaa 144464 Score = 87.7 bits (44), Expect = 1e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 342 gcagctccgtcgacgaggaatggctacatcaggatcgattgcttcggcgggctcaatcag 401 ||||||||||||| ||||||||| |||||| ||||||| |||| |||||||||||| ||| Sbjct: 143993 gcagctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccag 144052 Query: 402 ctgcggcgcgat 413 ||||| |||||| Sbjct: 144053 ctgcgacgcgat 144064 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 cgatcagatccagtgcttctcg 85 |||||||||||||||||||||| Sbjct: 143524 cgatcagatccagtgcttctcg 143545
>ref|NM_001068903.1| Oryza sativa (japonica cultivar-group) Os08g0537900 (Os08g0537900) mRNA, complete cds Length = 1856 Score = 456 bits (230), Expect = e-124 Identities = 400/456 (87%), Gaps = 3/456 (0%) Strand = Plus / Plus Query: 262 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggccgtgcggct 321 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 226 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggt 285 Query: 322 ggtggcagacggcaatgcccgcagctccgtcgacgaggaatggctacatcaggatcgatt 381 |||||| | |||||||||| || |||||||| ||||||||| |||||| ||||||| | Sbjct: 286 ggtggcgggcggcaatgccggc---tccgtcgaggaggaatgggtacatccggatcgact 342 Query: 382 gcttcggcgggctcaatcagctgcggcgcgatctgtgcgatggaattgcggttgcacgtc 441 ||| |||||||||||| |||||||| |||||||| || ||||||||||||||||| || | Sbjct: 343 gctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgcgcgcc 402 Query: 442 ttctgaacgcaacaatggttctgcccaagtttgaggttgctgcatactggaacgagtctg 501 |||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct: 403 ttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatcta 462 Query: 502 gtggttttgcagacgtgtttgatgttgatcacttcattgagcaaactagaggttatgtgg 561 |||| ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||| Sbjct: 463 gtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtgg 522 Query: 562 aggtggtcaaggatatgcccgaggagatatcgttgaaagagccatttaaggtcgattgcc 621 | || || ||||| ||||| || |||||| | | |||||||| |||||||| |||||| Sbjct: 523 aagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgca 582 Query: 622 gaaaacggaaaggaaattttgattatgtagaaacagttcttccagctcttttagaacatc 681 | ||||| |||||| |||||||||| || ||||| || ||||||||||| || || |||| Sbjct: 583 gcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatc 642 Query: 682 gatatatttctctaacacctgccatgagccaaagaa 717 |||||||| || |||||||||||||||||||||| Sbjct: 643 agtatatttcactgacacctgccatgagccaaagaa 678 Score = 58.0 bits (29), Expect = 1e-04 Identities = 29/29 (100%) Strand = Plus / Plus Query: 927 attgaagctgcacgtggggaggacaggaa 955 ||||||||||||||||||||||||||||| Sbjct: 690 attgaagctgcacgtggggaggacaggaa 718 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 cgatcagatccagtgcttctcg 85 |||||||||||||||||||||| Sbjct: 31 cgatcagatccagtgcttctcg 52
>gb|AY341827.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP29 mRNA, complete cds Length = 1853 Score = 456 bits (230), Expect = e-124 Identities = 400/456 (87%), Gaps = 3/456 (0%) Strand = Plus / Plus Query: 262 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggccgtgcggct 321 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 228 cgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggt 287 Query: 322 ggtggcagacggcaatgcccgcagctccgtcgacgaggaatggctacatcaggatcgatt 381 |||||| | |||||||||| || |||||||| ||||||||| |||||| ||||||| | Sbjct: 288 ggtggcgggcggcaatgccggc---tccgtcgaggaggaatgggtacatccggatcgact 344 Query: 382 gcttcggcgggctcaatcagctgcggcgcgatctgtgcgatggaattgcggttgcacgtc 441 ||| |||||||||||| |||||||| |||||||| || ||||||||||||||||| || | Sbjct: 345 gctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgcgcgcc 404 Query: 442 ttctgaacgcaacaatggttctgcccaagtttgaggttgctgcatactggaacgagtctg 501 |||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct: 405 ttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatcta 464 Query: 502 gtggttttgcagacgtgtttgatgttgatcacttcattgagcaaactagaggttatgtgg 561 |||| ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||| Sbjct: 465 gtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtgg 524 Query: 562 aggtggtcaaggatatgcccgaggagatatcgttgaaagagccatttaaggtcgattgcc 621 | || || ||||| ||||| || |||||| | | |||||||| |||||||| |||||| Sbjct: 525 aagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgca 584 Query: 622 gaaaacggaaaggaaattttgattatgtagaaacagttcttccagctcttttagaacatc 681 | ||||| |||||| |||||||||| || ||||| || ||||||||||| || || |||| Sbjct: 585 gcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatc 644 Query: 682 gatatatttctctaacacctgccatgagccaaagaa 717 |||||||| || |||||||||||||||||||||| Sbjct: 645 agtatatttcactgacacctgccatgagccaaagaa 680 Score = 58.0 bits (29), Expect = 1e-04 Identities = 29/29 (100%) Strand = Plus / Plus Query: 927 attgaagctgcacgtggggaggacaggaa 955 ||||||||||||||||||||||||||||| Sbjct: 692 attgaagctgcacgtggggaggacaggaa 720 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 cgatcagatccagtgcttctcg 85 |||||||||||||||||||||| Sbjct: 33 cgatcagatccagtgcttctcg 54
>ref|NM_202279.1| Arabidopsis thaliana unknown protein (AT1G52630) mRNA, complete cds Length = 1510 Score = 65.9 bits (33), Expect = 5e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 378 gattgcttcggcgggctcaatcagctgcggcgcgatctgtgcgatggaattgcggttgca 437 ||||||| ||||| || |||||| || | |||||| |||| |||||| ||| | |||| Sbjct: 296 gattgctatggcggcctgaatcagatgagacgcgatttgtgtgatggagttgggattgcc 355 Query: 438 cgtcttctgaacgcaacaatggttctgcccaagtttgaggttgctgcatactggaacgag 497 ||| | |||| || ||| | |||||||| ||||||||||| ||||| || ||||| ||| Sbjct: 356 cgtttgttgaatgctacacttgttctgccaaagtttgaggtagctgcctattggaatgag 415 Query: 498 tctggtggttttgcagacgtgtttgatgt 526 || |||| |||||||| ||||||||||| Sbjct: 416 tcaagtggatttgcagatgtgtttgatgt 444 Score = 52.0 bits (26), Expect = 0.008 Identities = 56/66 (84%) Strand = Plus / Plus Query: 831 aaacctttcttatcacttcaccttagatttgaaccagatatggttgcctacagtcgatgt 890 ||||| ||||| || |||||||| ||||||||||| || ||||| || ||||| | |||| Sbjct: 749 aaacccttcttgtcgcttcacctcagatttgaacctgacatggtagcgtacagccaatgt 808 Query: 891 gaatac 896 |||||| Sbjct: 809 gaatac 814
>ref|NM_104141.4| Arabidopsis thaliana unknown protein (AT1G52630) mRNA, complete cds Length = 1537 Score = 65.9 bits (33), Expect = 5e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 378 gattgcttcggcgggctcaatcagctgcggcgcgatctgtgcgatggaattgcggttgca 437 ||||||| ||||| || |||||| || | |||||| |||| |||||| ||| | |||| Sbjct: 323 gattgctatggcggcctgaatcagatgagacgcgatttgtgtgatggagttgggattgcc 382 Query: 438 cgtcttctgaacgcaacaatggttctgcccaagtttgaggttgctgcatactggaacgag 497 ||| | |||| || ||| | |||||||| ||||||||||| ||||| || ||||| ||| Sbjct: 383 cgtttgttgaatgctacacttgttctgccaaagtttgaggtagctgcctattggaatgag 442 Query: 498 tctggtggttttgcagacgtgtttgatgt 526 || |||| |||||||| ||||||||||| Sbjct: 443 tcaagtggatttgcagatgtgtttgatgt 471 Score = 52.0 bits (26), Expect = 0.008 Identities = 56/66 (84%) Strand = Plus / Plus Query: 831 aaacctttcttatcacttcaccttagatttgaaccagatatggttgcctacagtcgatgt 890 ||||| ||||| || |||||||| ||||||||||| || ||||| || ||||| | |||| Sbjct: 776 aaacccttcttgtcgcttcacctcagatttgaacctgacatggtagcgtacagccaatgt 835 Query: 891 gaatac 896 |||||| Sbjct: 836 gaatac 841
>gb|AY096411.1| Arabidopsis thaliana unknown protein (At1g52630) mRNA, complete cds Length = 1351 Score = 65.9 bits (33), Expect = 5e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 378 gattgcttcggcgggctcaatcagctgcggcgcgatctgtgcgatggaattgcggttgca 437 ||||||| ||||| || |||||| || | |||||| |||| |||||| ||| | |||| Sbjct: 241 gattgctatggcggcctgaatcagatgagacgcgatttgtgtgatggagttgggattgcc 300 Query: 438 cgtcttctgaacgcaacaatggttctgcccaagtttgaggttgctgcatactggaacgag 497 ||| | |||| || ||| | |||||||| ||||||||||| ||||| || ||||| ||| Sbjct: 301 cgtttgttgaatgctacacttgttctgccaaagtttgaggtagctgcctattggaatgag 360 Query: 498 tctggtggttttgcagacgtgtttgatgt 526 || |||| |||||||| ||||||||||| Sbjct: 361 tcaagtggatttgcagatgtgtttgatgt 389 Score = 52.0 bits (26), Expect = 0.008 Identities = 56/66 (84%) Strand = Plus / Plus Query: 831 aaacctttcttatcacttcaccttagatttgaaccagatatggttgcctacagtcgatgt 890 ||||| ||||| || |||||||| ||||||||||| || ||||| || ||||| | |||| Sbjct: 694 aaacccttcttgtcgcttcacctcagatttgaacctgacatggtagcgtacagccaatgt 753 Query: 891 gaatac 896 |||||| Sbjct: 754 gaatac 759
>gb|AY074537.1| Arabidopsis thaliana unknown protein (At1g52630) mRNA, complete cds Length = 1500 Score = 65.9 bits (33), Expect = 5e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 378 gattgcttcggcgggctcaatcagctgcggcgcgatctgtgcgatggaattgcggttgca 437 ||||||| ||||| || |||||| || | |||||| |||| |||||| ||| | |||| Sbjct: 270 gattgctatggcggcctgaatcagatgagacgcgatttgtgtgatggagttgggattgcc 329 Query: 438 cgtcttctgaacgcaacaatggttctgcccaagtttgaggttgctgcatactggaacgag 497 ||| | |||| || ||| | |||||||| ||||||||||| ||||| || ||||| ||| Sbjct: 330 cgtttgttgaatgctacacttgttctgccaaagtttgaggtagctgcctattggaatgag 389 Query: 498 tctggtggttttgcagacgtgtttgatgt 526 || |||| |||||||| ||||||||||| Sbjct: 390 tcaagtggatttgcagatgtgtttgatgt 418 Score = 52.0 bits (26), Expect = 0.008 Identities = 56/66 (84%) Strand = Plus / Plus Query: 831 aaacctttcttatcacttcaccttagatttgaaccagatatggttgcctacagtcgatgt 890 ||||| ||||| || |||||||| ||||||||||| || ||||| || ||||| | |||| Sbjct: 723 aaacccttcttgtcgcttcacctcagatttgaacctgacatggtagcgtacagccaatgt 782 Query: 891 gaatac 896 |||||| Sbjct: 783 gaatac 788
>emb|BX816400.1|CNS0ADVK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1463 Score = 65.9 bits (33), Expect = 5e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 378 gattgcttcggcgggctcaatcagctgcggcgcgatctgtgcgatggaattgcggttgca 437 ||||||| ||||| || |||||| || | |||||| |||| |||||| ||| | |||| Sbjct: 322 gattgctatggcggcctgaatcagatgagacgcgatttgtgtgatggagttgggattgcc 381 Query: 438 cgtcttctgaacgcaacaatggttctgcccaagtttgaggttgctgcatactggaacgag 497 ||| | |||| || ||| | |||||||| ||||||||||| ||||| || ||||| ||| Sbjct: 382 cgtttgttgaatgctacacttgttctgccaaagtttgaggtagctgcctattggaatgag 441 Query: 498 tctggtggttttgcagacgtgtttgatgt 526 || |||| |||||||| ||||||||||| Sbjct: 442 tcaagtggatttgcagatgtgtttgatgt 470 Score = 52.0 bits (26), Expect = 0.008 Identities = 56/66 (84%) Strand = Plus / Plus Query: 831 aaacctttcttatcacttcaccttagatttgaaccagatatggttgcctacagtcgatgt 890 ||||| ||||| || |||||||| ||||||||||| || ||||| || ||||| | |||| Sbjct: 775 aaacccttcttgtcgcttcacctcagatttgaacctgacatggtagcgtacagccaatgt 834 Query: 891 gaatac 896 |||||| Sbjct: 835 gaatac 840
>emb|BX816742.1|CNS0AD0H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1454 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 459 gttctgcccaagtttgaggttgctgcatactggaacgagtctggtggttttgcagacgtg 518 |||||||| ||||||||||| ||||| || ||||| ||||| |||| |||||||| ||| Sbjct: 376 gttctgccaaagtttgaggtagctgcctattggaatgagtcaagtggatttgcagatgtg 435 Query: 519 tttgatgt 526 |||||||| Sbjct: 436 tttgatgt 443 Score = 52.0 bits (26), Expect = 0.008 Identities = 56/66 (84%) Strand = Plus / Plus Query: 831 aaacctttcttatcacttcaccttagatttgaaccagatatggttgcctacagtcgatgt 890 ||||| ||||| || |||||||| ||||||||||| || ||||| || ||||| | |||| Sbjct: 748 aaacccttcttgtcgcttcacctcagatttgaacctgacatggtagcgtacagccaatgt 807 Query: 891 gaatac 896 |||||| Sbjct: 808 gaatac 813
>emb|BX816713.1|CNS0AD73 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1466 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 459 gttctgcccaagtttgaggttgctgcatactggaacgagtctggtggttttgcagacgtg 518 |||||||| ||||||||||| ||||| || ||||| ||||| |||| |||||||| ||| Sbjct: 376 gttctgccaaagtttgaggtagctgcctattggaatgagtcaagtggatttgcagatgtg 435 Query: 519 tttgatgt 526 |||||||| Sbjct: 436 tttgatgt 443
>gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 sequence, complete sequence Length = 117737 Score = 52.0 bits (26), Expect = 0.008 Identities = 56/66 (84%) Strand = Plus / Plus Query: 831 aaacctttcttatcacttcaccttagatttgaaccagatatggttgcctacagtcgatgt 890 ||||| ||||| || |||||||| ||||||||||| || ||||| || ||||| | |||| Sbjct: 38714 aaacccttcttgtcgcttcacctcagatttgaacctgacatggtagcgtacagccaatgt 38773 Query: 891 gaatac 896 |||||| Sbjct: 38774 gaatac 38779 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 459 gttctgcccaagtttgaggttgctgcatactggaacgagtc 499 |||||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 38142 gttctgccaaagtttgaggtagctgcctattggaatgagtc 38182
>dbj|AP004577.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10N22, TM0381, complete sequence Length = 80655 Score = 50.1 bits (25), Expect = 0.031 Identities = 31/33 (93%) Strand = Plus / Minus Query: 1448 tgagttcaagttgtagcacaactgcacaagtga 1480 ||||||||| || |||||||||||||||||||| Sbjct: 65126 tgagttcaatttctagcacaactgcacaagtga 65094
>gb|AF281148.2| Pseudomonas fluorescens strain WCS365 nuo operon, complete sequence Length = 15534 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 257 ttcgccgtcggggtcgcgggtca 279 ||||||||||||||||||||||| Sbjct: 9072 ttcgccgtcggggtcgcgggtca 9050
>emb|AJ333971.1|HSA333971 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-BB12RS Length = 723 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 257 ttcgccgtcggggtcgcgggtca 279 ||||||||||||||||||||||| Sbjct: 38 ttcgccgtcggggtcgcgggtca 16
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 tcgccgtcggggtcgcgggtca 279 |||||||||||||||||||||| Sbjct: 2590288 tcgccgtcggggtcgcgggtca 2590309 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 atgggcgcagcggcgggtggcggag 305 ||||||| ||||||||||||||||| Sbjct: 905401 atgggcgaagcggcgggtggcggag 905425
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 tcgccgtcggggtcgcgggtca 279 |||||||||||||||||||||| Sbjct: 2991617 tcgccgtcggggtcgcgggtca 2991596 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 atgggcgcagcggcgggtggcggag 305 ||||||| ||||||||||||||||| Sbjct: 4622455 atgggcgaagcggcgggtggcggag 4622431
>gb|AY657992.1| Synthetic construct Peudomonas aeruginosa clone FLH046384.01F PA2644 gene, partial cds Length = 549 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 tcgccgtcggggtcgcgggtca 279 |||||||||||||||||||||| Sbjct: 176 tcgccgtcggggtcgcgggtca 155
>emb|AL592151.13| Human DNA sequence from clone RP11-351N5 on chromosome 1 Contains a novel gene, the 5' end of the AKT3 gene for v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) and a CpG island, complete sequence Length = 148345 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 499 ctggtggttttgcagacgtgtt 520 |||||||||||||||||||||| Sbjct: 74528 ctggtggttttgcagacgtgtt 74507
>emb|BX322605.4| Zebrafish DNA sequence from clone RP71-80A19 in linkage group 10, complete sequence Length = 131830 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 710 ccaaagaaaagatagatatcca 731 |||||||||||||||||||||| Sbjct: 35009 ccaaagaaaagatagatatcca 34988
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 tcgccgtcggggtcgcgggtca 279 |||||||||||||||||||||| Sbjct: 1051468 tcgccgtcggggtcgcgggtca 1051489
>emb|AL954770.9| Zebrafish DNA sequence from clone CH211-193A15, complete sequence Length = 151426 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 710 ccaaagaaaagatagatatcca 731 |||||||||||||||||||||| Sbjct: 139688 ccaaagaaaagatagatatcca 139667
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 gtttgatgttgatcacttcat 538 ||||||||||||||||||||| Sbjct: 1442401 gtttgatgttgatcacttcat 1442421
>gb|AC188447.2| Gallus gallus BAC clone CH261-140M5 from chromosome z, complete sequence Length = 206649 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 898 gtgccctttcttccaaatcac 918 ||||||||||||||||||||| Sbjct: 170931 gtgccctttcttccaaatcac 170911
>gb|AC157790.11| Mus musculus chromosome 7, clone RP24-151M10, complete sequence Length = 168779 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1053 cctacagagacaaacatttatttag 1077 |||||||||||||||| |||||||| Sbjct: 68899 cctacagagacaaacaattatttag 68875
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 gtggtcgaccgcggcgtcgtggtgg 137 |||||||| |||||||||||||||| Sbjct: 915837 gtggtcgaacgcggcgtcgtggtgg 915861
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 670 ttttagaacatcgatatattt 690 ||||||||||||||||||||| Sbjct: 123096 ttttagaacatcgatatattt 123076
>gb|AC163021.5| Mus musculus chromosome 15, clone RP23-228E13, complete sequence Length = 215165 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1284 acaatgcaagggctacagaag 1304 ||||||||||||||||||||| Sbjct: 35227 acaatgcaagggctacagaag 35207
>gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome 16, complete sequence Length = 193474 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1077 gctgctggggatgggctaatg 1097 ||||||||||||||||||||| Sbjct: 117787 gctgctggggatgggctaatg 117767
>gb|AC133899.9| Mus musculus chromosome 15, clone RP24-511H11, complete sequence Length = 185808 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1284 acaatgcaagggctacagaag 1304 ||||||||||||||||||||| Sbjct: 142320 acaatgcaagggctacagaag 142340
>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence Length = 204292 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1284 acaatgcaagggctacagaag 1304 ||||||||||||||||||||| Sbjct: 119411 acaatgcaagggctacagaag 119391
>gb|AC165259.2| Mus musculus BAC clone RP23-146P7 from chromosome 17, complete sequence Length = 252045 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 941 tggggaggacaggaatgtatt 961 ||||||||||||||||||||| Sbjct: 106045 tggggaggacaggaatgtatt 106025
>dbj|AK148843.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120454D05 product:unclassifiable, full insert sequence Length = 816 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 672 ttagaacatcgatatatttctctaa 696 ||||||||| ||||||||||||||| Sbjct: 18 ttagaacattgatatatttctctaa 42
>ref|XM_650677.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (23.t00012) partial mRNA Length = 240 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1692 tgttttcggtgagttcagata 1712 ||||||||||||||||||||| Sbjct: 176 tgttttcggtgagttcagata 196
>emb|CR628365.6| Zebrafish DNA sequence from clone CH211-137O16 in linkage group 11, complete sequence Length = 191036 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1891 ttgaattttgcattgctcagaaact 1915 |||||||||||||| |||||||||| Sbjct: 86658 ttgaattttgcatttctcagaaact 86634
>gb|AC069255.18|AC069255 Homo sapiens 3 BAC RP11-568N1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184151 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 696 acacctgccatgagccaaagaaaag 720 ||||||||||||||| ||||||||| Sbjct: 154543 acacctgccatgagctaaagaaaag 154567
>gb|AC012070.8| Homo sapiens BAC clone RP11-318K6 from 2, complete sequence Length = 149776 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1206 tactatgtttcagtcaacagc 1226 ||||||||||||||||||||| Sbjct: 129298 tactatgtttcagtcaacagc 129278
>gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, complete sequence Length = 190753 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 696 acacctgccatgagccaaagaaaag 720 ||||||||||||||| ||||||||| Sbjct: 66420 acacctgccatgagctaaagaaaag 66444
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 518 gtttgatgttgatcacttcat 538 ||||||||||||||||||||| Sbjct: 2778346 gtttgatgttgatcacttcat 2778326
>emb|AL807811.9| Mouse DNA sequence from clone RP23-247I1 on chromosome 4, complete sequence Length = 249021 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 892 aatacagtgccctttcttcca 912 ||||||||||||||||||||| Sbjct: 158987 aatacagtgccctttcttcca 159007 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 341,064,245 Number of extensions: 18219018 Number of successful extensions: 351263 Number of sequences better than 10.0: 41 Number of HSP's gapped: 351260 Number of HSP's successfully gapped: 65 Length of query: 1981 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1958 Effective length of database: 18,503,978,556 Effective search space: 36230790012648 Effective search space used: 36230790012648 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
