ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf79n04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ251051.1|AFA251051 Avena fatua mRNA for VIP2 protein (vip2 gene) Length = 1724 Score = 1493 bits (753), Expect = 0.0 Identities = 1025/1115 (91%), Gaps = 3/1115 (0%) Strand = Plus / Plus Query: 362 tcgtgctcgatctgcctcgacgctgtcgttgccgcca---gcgcggagaggtccacggcg 418 ||||||||||||||||||||||| ||||| |||||| ||| ||| ||||||||||| Sbjct: 271 tcgtgctcgatctgcctcgacgcggtcgtcgccgccgccggcggggacaggtccacggcc 330 Query: 419 aggctgcagtgcggtcacgagttccaccttgattgcattggatcggcattcaatgccaaa 478 |||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 331 aggctgcagtgcggccacgagttccacctcgattgcattggatcagcatttaatgccaaa 390 Query: 479 ggagttatgcaatgcccgaactgccgcaaaattgagaaagggaattggctctatgctaat 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 391 ggagttatgcaatgcccgaactgccgcaaaattgagaaagggaattggctctatgcgaat 450 Query: 539 ggctcccgtccctcacaggatattaacatggatgagtgggctcatgaagaggacctctat 598 ||||| ||||||||||||||| | ||||||||||||||||||||||| || ||||| || Sbjct: 451 ggctcgcgtccctcacaggatgtcaacatggatgagtgggctcatgatgaagacctttac 510 Query: 599 gatgttagttactctgagatgccatttcgttttcattggtgtccatttggtcgcttagcg 658 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 511 gatgttagttactctgagatgccatttcgttttcactggtgtccatttggtcgcttagca 570 Query: 659 cagcttccatcattctttgaggaaggagaatcatcacctccagttacttttcatgacttt 718 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 caacttccatcattctttgaggaaggagaatcatcacctccagttacttttcatgacttt 630 Query: 719 atgggacaacatgtgtttccggagcacctatctgtatctgctgcaccaggggcacatcct 778 ||||| || ||||||||||| ||||| ||||||||| ||||||||||||||||||||||| Sbjct: 631 atgggccagcatgtgtttccagagcatctatctgtacctgctgcaccaggggcacatcct 690 Query: 779 tgcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagctcccat 838 ||||| || |||||||| ||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 691 tgcccttacgtggcatatttgcaacctcttccatcgctggcctcatcatcaagctcccat 750 Query: 839 gtccccgagagaactatggatggttccgcttatcatgatccctggaatcacctagctggc 898 ||||| ||||||||||||||| |||||| |||||||||| |||||||||||| |||||| Sbjct: 751 gtccctgagagaactatggatagttccgtctatcatgatcactggaatcacctggctggc 810 Query: 899 ccatcagataataggcccttgcaaacagtgcaacccaccgatttccatcataaccattgg 958 ||||||||| |||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 811 ccatcagatgggaggcccttgcaatcggtgcaacccactgatttccatcataaccattgg 870 Query: 959 gcgcatcttccccattcctatgcgcaatccaacagcaataacggggtgacggagcagcca 1018 | |||||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 871 gggcatctgccccattcctatgctcaatccaacagcaataacggggtgaccgagcaacca 930 Query: 1019 ggggtcccttttggaacaatgagggctgcaaggatggatggtgatagccaacgtcgagga 1078 ||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| Sbjct: 931 ggggtcccttttggaacaatgagggctgcaagggttgacggtgatagccaacgtcgagga 990 Query: 1079 tctgttgtttctccatcgtacttcagtaatggatctggctctagatctagagctcctaat 1138 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 991 tctgttttttctccatcgtacttcagtaatgggtctggctctagatctagagctcctaat 1050 Query: 1139 gttcctcctctggtacctcagttcatgagggcacatggtagcatcaacgaacagtacccg 1198 |||||||| ||||||||||| || |||||||||||| | ||| ||||||||||||||| | Sbjct: 1051 gttcctccactggtacctcaatttatgagggcacatagcagcctcaacgaacagtacctg 1110 Query: 1199 cagagttcatcatccagccttttcgctggagctcatagatcaggaggcatgcgacctgcc 1258 |||| | |||| || ||||||||||| || || |||||||| ||||||||||| ||||| Sbjct: 1111 cagaatccatcttctagccttttcgccggggcgcatagatcgggaggcatgcggcctgct 1170 Query: 1259 cctccgccacctcaaccggaaaacccaacattttgcctgttcccaccgggctcatccggt 1318 || || || |||||||| || |||||||||||||||||||||||||| || |||||||| Sbjct: 1171 ccgccacctcctcaaccagagaacccaacattttgcctgttcccaccaggttcatccggc 1230 Query: 1319 catagttcaatggatactgatgaggctggaggaagccgattctatgcctgggagcgcgat 1378 |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 1231 catagttcaatggagactgatgacgctggaggaaaccgattctatgcctgggagcgcgat 1290 Query: 1379 cgcttcgcgccgtacccattgatgccagtcgactgtgagacaagctggtggagctcacag 1438 ||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 1291 cgcttcgcgccatacccattaatgccagtggactgcgagacaagctggtggagctcacag 1350 Query: 1439 cagtctcatggcgcatcagaatccacacccgcacc 1473 ||||||||||||||||||||||||||||| ||||| Sbjct: 1351 cagtctcatggcgcatcagaatccacaccggcacc 1385 Score = 172 bits (87), Expect = 3e-39 Identities = 126/139 (90%) Strand = Plus / Plus Query: 100 ggcgcgaggaacccgaggagcgcgcgcgtgcgatccccgaggcgcggggagtcgattccg 159 |||||||||| |||||||||||||||| || |||||||||||||||||||| |||||||| Sbjct: 9 ggcgcgaggaccccgaggagcgcgcgcttgtgatccccgaggcgcggggagccgattccg 68 Query: 160 gcgccgagacagtctcgccctcgccgggccggccgttccgagccctctatcgccgaggat 219 |||||| ||||| ||||||||| |||||||||| | | ||| ||||||||||||||||| Sbjct: 69 gcgccgggacagcctcgccctcaccgggccggctgattggagacctctatcgccgaggat 128 Query: 220 ttggtgggatccggccaag 238 | ||||||||||||||||| Sbjct: 129 tcggtgggatccggccaag 147 Score = 143 bits (72), Expect = 3e-30 Identities = 177/202 (87%), Gaps = 10/202 (4%) Strand = Plus / Plus Query: 1593 agaggcaacctaagttaaaacttg-acatttg-gaacctgagttgcttgtaagaaaagat 1650 ||||||||||||||||||||||| | |||| ||||||||||||||||||||||| ||| Sbjct: 1505 agaggcaacctaagttaaaactttcatatttcagaacctgagttgcttgtaagaaatgat 1564 Query: 1651 ggggaaaaaaccatctgtatggaatttaaaccgggttgtgcgctgaa-cttccggagaat 1709 ||| |||| | |||||||| |||| ||||||||||| ||| |||| | || ||||||| Sbjct: 1565 ggg--aaaacctgtctgtatgcaatt-aaaccgggttgcgcggtgaaacatctggagaat 1621 Query: 1710 tctgca-agggagaaacatgaaataacctggagggaaaacgttttggtttggtttatgtg 1768 |||||| |||||||||||||||||||||||||| | || ||||||| ||||||||||||| Sbjct: 1622 tctgcagagggagaaacatgaaataacctggagaggaa-cgttttgatttggtttatgtg 1680 Query: 1769 aattccgtctcgtacatatttg 1790 ||||||| ||||||||||||| Sbjct: 1681 aattccg--tcgtacatatttg 1700 Score = 109 bits (55), Expect = 4e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 1496 cagtggatcggcctcggcaggtcgtcgcccgagaatagatcacccgagggctcatcgtat 1555 |||||||||||||||||| |||| ||||| || || ||||| ||||||||| |||| ||| Sbjct: 1420 cagtggatcggcctcggccggtcatcgcctgaaaacagatcgcccgagggcacatcatat 1479 Query: 1556 cgacaaatgcactctcctcggatgtag 1582 ||||||||||||||||||||||||||| Sbjct: 1480 cgacaaatgcactctcctcggatgtag 1506
>ref|NM_001061218.1| Oryza sativa (japonica cultivar-group) Os05g0154600 (Os05g0154600) mRNA, partial cds Length = 1535 Score = 1068 bits (539), Expect = 0.0 Identities = 1046/1214 (86%), Gaps = 12/1214 (0%) Strand = Plus / Plus Query: 360 tgtcgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcga 419 ||||||||||||||||||||||||| || || |||||| ||| ||||||||||||||||| Sbjct: 90 tgtcgtgctcgatctgcctcgacgcggttgtcgccgccggcggggagaggtccacggcga 149 Query: 420 ggctgcagtgcggtcacgagttccaccttgattgcattggatcggcattcaatgccaaag 479 |||||||||| || |||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 150 ggctgcagtgtggccacgagttccacctcgattgcattggatcagcatttaatgccaaag 209 Query: 480 gagttatgcaatgcccgaactgccgcaaaattgagaaagggaattggctctatgctaatg 539 | |||||||||||||| ||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 210 gcgttatgcaatgccccaactgccgcaaaattgaaaaggggaactggctctatgcaaatg 269 Query: 540 gctcccgtccctcacaggatattaacatggatgagtgggctcatgaagaggacctctatg 599 | ||||| ||| |||| ||| |||| |||||||||||||||||||| || ||||| |||| Sbjct: 270 gttcccgacccacacaagatgttaatatggatgagtgggctcatgatgaagacctttatg 329 Query: 600 atgttagttactctgagatgccatttcgttttcattggtgtccatttggtcgcttagcgc 659 ||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| || || | Sbjct: 330 atgttagttactcggagatgccctttcggtttcactggtgcccatttggtcgtttggctc 389 Query: 660 agcttccatcattctttgaggaaggagaatcatcacctccagttacttttcatgacttta 719 | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 390 aacttccatccttctttgaggaaggagaatcatcacccccagttacttttcatgacttca 449 Query: 720 tgggacaacatgtgtttccggagcaccta---tctgtatctgctgcaccaggggca---c 773 ||||||||||| ||||| ||||||| || |||||||| ||||||| |||||| | Sbjct: 450 tgggacaacatatgtttacggagcatgtagctgctgtatcttctgcacctggggcagctc 509 Query: 774 atccttgcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagct 833 |||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 510 atccatgcccatatgtggcatacttgcatcctcttccatcattggcgtcatcatcaagct 569 Query: 834 cccatgtccccgagagaactatggatggttccgcttatcatgatccctggaatcacctag 893 | ||||| || |||||||||||||||||| | || ||||||||||||||| | | | | | Sbjct: 570 ctcatgttcctgagagaactatggatggtcctgcatatcatgatccctggcaccccttgg 629 Query: 894 ctggcccatcagataataggcccttgcaaacagtgcaacccaccgatttccatcataacc 953 |||| || |||||| ||||||||||||| |||||||||| | ||||| |||||||||| Sbjct: 630 ctgggccttcagatggtaggcccttgcaatcagtgcaacctgctgattttcatcataacc 689 Query: 954 attgggcgcatcttccccattcctatgcgcaatccaacagcaataacggggtgacggagc 1013 ||||||||||| ||||| |||||||| | ||| |||||| |||||| |||||| | |||| Sbjct: 690 attgggcgcatgttcccaattcctatcctcaacccaacaacaataatggggtggccgagc 749 Query: 1014 agccaggggtcccttttggaacaatgagggctgcaaggatggatggtgatagccaacgtc 1073 ||| ||| |||||||||||||||| |||||||||||| | |||||||||| |||||||| Sbjct: 750 agcaaggagtcccttttggaacaacgagggctgcaagagttgatggtgatacccaacgtc 809 Query: 1074 gaggatctgttgtttctccatcgtacttcagtaatggatctggctctagatctagagctc 1133 ||||||| | |||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 810 gaggatcatctatttctccatcatacttcagtaatggatctggttctagatctagagctc 869 Query: 1134 ctaatgttcctcctctggtacctcagttcatgagggcacatggtagcatcaacgaacagt 1193 |||||||||||||| |||||||||| ||||||||||| || || ||||| | ||||||| Sbjct: 870 ctaatgttcctcctatggtacctcaattcatgagggcgcacggcagcattagtgaacagt 929 Query: 1194 acccgcagagttcatcatccagccttttcgctggagctcatagatcaggaggcatgcgac 1253 ||| ||||||||||||||||||| | || ||||| |||||||||||||||||||||||| Sbjct: 930 accagcagagttcatcatccagcttatttgctggggctcatagatcaggaggcatgcgaa 989 Query: 1254 ctgcccctccgccacctcaaccggaaaacccaacattttgcctgttcccaccgggctcat 1313 |||| || ||||| |||| ||| || ||||| |||||||||| |||||||| || |||| Sbjct: 990 ctgcaccgccgccccctctaccagagaacccggcattttgccttttcccaccaggttcat 1049 Query: 1314 ccggtcatagttcaatggatactgatgaggctggaggaagccgattctatgcctgggagc 1373 | || |||| || ||||| |||||||| || ||||||| |||||||||||||||||| | Sbjct: 1050 ctggccataactcgatggagactgatgatgcaggaggaaaccgattctatgcctgggaac 1109 Query: 1374 gcgatcgcttcgcgccgtacccattgatgccagtcgactgtgagacaagctggtggagct 1433 | ||||||||||| || |||||| | |||||||| ||||||||||||| ||||||||| | Sbjct: 1110 gggatcgcttcgcaccatacccactaatgccagtggactgtgagacaaactggtggagtt 1169 Query: 1434 cacagcagtctcatggcgcatcagaatccacacccgcacctgcgccgaggagactctttg 1493 |||| || |||||||| ||||||| |||||| ||||| || |||||||| |||| Sbjct: 1170 cacaacaatctcatggtacatcaga------acccgcgcctgctccaaggagactatttg 1223 Query: 1494 gccagtggatcggcctcggcaggtcgtcgcccgagaatagatcacccgagggctcatcgt 1553 | || ||||| || | || || || || || || ||| ||||||||||||||||||||| Sbjct: 1224 ggcaatggattggtgttggaagatcatctccggaaaatcgatcacccgagggctcatcgt 1283 Query: 1554 atcgacaaatgcac 1567 |||| ||||||||| Sbjct: 1284 atcggcaaatgcac 1297 Score = 48.1 bits (24), Expect = 0.11 Identities = 53/60 (88%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 1750 ttttggtttggtttatgtgaattccgtctcgtacatatttgaaaatcaatttgggatatt 1809 ||||| |||||||||| ||| |||| || |||||||||||| ||||||| |||||||||| Sbjct: 1471 ttttgatttggtttat-tgagttccatcacgtacatatttg-aaatcaagttgggatatt 1528
>dbj|AK111816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147K05, full insert sequence Length = 1537 Score = 1068 bits (539), Expect = 0.0 Identities = 1046/1214 (86%), Gaps = 12/1214 (0%) Strand = Plus / Plus Query: 360 tgtcgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcga 419 ||||||||||||||||||||||||| || || |||||| ||| ||||||||||||||||| Sbjct: 90 tgtcgtgctcgatctgcctcgacgcggttgtcgccgccggcggggagaggtccacggcga 149 Query: 420 ggctgcagtgcggtcacgagttccaccttgattgcattggatcggcattcaatgccaaag 479 |||||||||| || |||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 150 ggctgcagtgtggccacgagttccacctcgattgcattggatcagcatttaatgccaaag 209 Query: 480 gagttatgcaatgcccgaactgccgcaaaattgagaaagggaattggctctatgctaatg 539 | |||||||||||||| ||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 210 gcgttatgcaatgccccaactgccgcaaaattgaaaaggggaactggctctatgcaaatg 269 Query: 540 gctcccgtccctcacaggatattaacatggatgagtgggctcatgaagaggacctctatg 599 | ||||| ||| |||| ||| |||| |||||||||||||||||||| || ||||| |||| Sbjct: 270 gttcccgacccacacaagatgttaatatggatgagtgggctcatgatgaagacctttatg 329 Query: 600 atgttagttactctgagatgccatttcgttttcattggtgtccatttggtcgcttagcgc 659 ||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| || || | Sbjct: 330 atgttagttactcggagatgccctttcggtttcactggtgcccatttggtcgtttggctc 389 Query: 660 agcttccatcattctttgaggaaggagaatcatcacctccagttacttttcatgacttta 719 | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 390 aacttccatccttctttgaggaaggagaatcatcacccccagttacttttcatgacttca 449 Query: 720 tgggacaacatgtgtttccggagcaccta---tctgtatctgctgcaccaggggca---c 773 ||||||||||| ||||| ||||||| || |||||||| ||||||| |||||| | Sbjct: 450 tgggacaacatatgtttacggagcatgtagctgctgtatcttctgcacctggggcagctc 509 Query: 774 atccttgcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagct 833 |||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 510 atccatgcccatatgtggcatacttgcatcctcttccatcattggcgtcatcatcaagct 569 Query: 834 cccatgtccccgagagaactatggatggttccgcttatcatgatccctggaatcacctag 893 | ||||| || |||||||||||||||||| | || ||||||||||||||| | | | | | Sbjct: 570 ctcatgttcctgagagaactatggatggtcctgcatatcatgatccctggcaccccttgg 629 Query: 894 ctggcccatcagataataggcccttgcaaacagtgcaacccaccgatttccatcataacc 953 |||| || |||||| ||||||||||||| |||||||||| | ||||| |||||||||| Sbjct: 630 ctgggccttcagatggtaggcccttgcaatcagtgcaacctgctgattttcatcataacc 689 Query: 954 attgggcgcatcttccccattcctatgcgcaatccaacagcaataacggggtgacggagc 1013 ||||||||||| ||||| |||||||| | ||| |||||| |||||| |||||| | |||| Sbjct: 690 attgggcgcatgttcccaattcctatcctcaacccaacaacaataatggggtggccgagc 749 Query: 1014 agccaggggtcccttttggaacaatgagggctgcaaggatggatggtgatagccaacgtc 1073 ||| ||| |||||||||||||||| |||||||||||| | |||||||||| |||||||| Sbjct: 750 agcaaggagtcccttttggaacaacgagggctgcaagagttgatggtgatacccaacgtc 809 Query: 1074 gaggatctgttgtttctccatcgtacttcagtaatggatctggctctagatctagagctc 1133 ||||||| | |||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 810 gaggatcatctatttctccatcatacttcagtaatggatctggttctagatctagagctc 869 Query: 1134 ctaatgttcctcctctggtacctcagttcatgagggcacatggtagcatcaacgaacagt 1193 |||||||||||||| |||||||||| ||||||||||| || || ||||| | ||||||| Sbjct: 870 ctaatgttcctcctatggtacctcaattcatgagggcgcacggcagcattagtgaacagt 929 Query: 1194 acccgcagagttcatcatccagccttttcgctggagctcatagatcaggaggcatgcgac 1253 ||| ||||||||||||||||||| | || ||||| |||||||||||||||||||||||| Sbjct: 930 accagcagagttcatcatccagcttatttgctggggctcatagatcaggaggcatgcgaa 989 Query: 1254 ctgcccctccgccacctcaaccggaaaacccaacattttgcctgttcccaccgggctcat 1313 |||| || ||||| |||| ||| || ||||| |||||||||| |||||||| || |||| Sbjct: 990 ctgcaccgccgccccctctaccagagaacccggcattttgccttttcccaccaggttcat 1049 Query: 1314 ccggtcatagttcaatggatactgatgaggctggaggaagccgattctatgcctgggagc 1373 | || |||| || ||||| |||||||| || ||||||| |||||||||||||||||| | Sbjct: 1050 ctggccataactcgatggagactgatgatgcaggaggaaaccgattctatgcctgggaac 1109 Query: 1374 gcgatcgcttcgcgccgtacccattgatgccagtcgactgtgagacaagctggtggagct 1433 | ||||||||||| || |||||| | |||||||| ||||||||||||| ||||||||| | Sbjct: 1110 gggatcgcttcgcaccatacccactaatgccagtggactgtgagacaaactggtggagtt 1169 Query: 1434 cacagcagtctcatggcgcatcagaatccacacccgcacctgcgccgaggagactctttg 1493 |||| || |||||||| ||||||| |||||| ||||| || |||||||| |||| Sbjct: 1170 cacaacaatctcatggtacatcaga------acccgcgcctgctccaaggagactatttg 1223 Query: 1494 gccagtggatcggcctcggcaggtcgtcgcccgagaatagatcacccgagggctcatcgt 1553 | || ||||| || | || || || || || || ||| ||||||||||||||||||||| Sbjct: 1224 ggcaatggattggtgttggaagatcatctccggaaaatcgatcacccgagggctcatcgt 1283 Query: 1554 atcgacaaatgcac 1567 |||| ||||||||| Sbjct: 1284 atcggcaaatgcac 1297 Score = 48.1 bits (24), Expect = 0.11 Identities = 53/60 (88%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 1750 ttttggtttggtttatgtgaattccgtctcgtacatatttgaaaatcaatttgggatatt 1809 ||||| |||||||||| ||| |||| || |||||||||||| ||||||| |||||||||| Sbjct: 1471 ttttgatttggtttat-tgagttccatcacgtacatatttg-aaatcaagttgggatatt 1528
>gb|AY104627.1| Zea mays PCO126290 mRNA sequence Length = 1295 Score = 658 bits (332), Expect = 0.0 Identities = 761/904 (84%), Gaps = 15/904 (1%) Strand = Plus / Plus Query: 360 tgtcgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcga 419 |||| |||||||||||||||||||| || | || || || |||||||||||| || | Sbjct: 371 tgtcctgctcgatctgcctcgacgcggtgctcgctgcgtccggggagaggtccaccgcca 430 Query: 420 ggctgcagtgcggtcacgagttccaccttgattgcattggatcggcattcaatgccaaag 479 ||||||| ||||| |||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 431 ggctgcactgcggccacgagttccacctagattgcattggatcagcatttaatgccaaag 490 Query: 480 gagttatgcaatgcccgaactgccgcaaaattgagaaagggaattggctctatgctaatg 539 | |||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 491 gggttatgcaatgccccaactgccgcaaaatcgagaaagggaattggctttatgcaaatg 550 Query: 540 gctcccgtccctcacaggatattaacatggatgagtgggctcatgaagaggacctctatg 599 | || || | | || ||| ||| ||||||||| ||||| ||||| || ||||| |||| Sbjct: 551 gttctcgatctgcccatgatgttagcatggatgaatgggcccatgatgaagacctttatg 610 Query: 600 atgttagttactctgagatgccatttcgttttcattggtgtccatttggtcgcttagcgc 659 ||||||| ||||| || ||||||||||| || ||||||||||| ||||| |||||| | | Sbjct: 611 atgttagctactcagatatgccatttcgcttccattggtgtccgtttgggcgcttaaccc 670 Query: 660 agcttccatcattctttgaggaaggagaatcatcacctccagttacttttcatgacttta 719 | |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 671 aacttccatctttatttgaggaaggagaatcatcacctccagttacatttcatgacttca 730 Query: 720 tgggacaacatgtgtttccggagcacctatctgtatctgctgcaccaggggca---catc 776 ||||||||||||||||| ||||||| || |||||||||||||| ||||| || ||| Sbjct: 731 tgggacaacatgtgtttacggagcaagtagctgtatctgctgcagcagggacaactaatc 790 Query: 777 cttgcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagctccc 836 ||||||| |||||||||||||||||||||||| || | || | |||| ||||||||||| Sbjct: 791 cttgcccctatgtggcatacttgcatcctcttacaccattgacgtcattgtcaagctccc 850 Query: 837 atgtccccgagagaactatggatggttccgcttatcatgatccctggaatcacctagctg 896 ||||||| || |||||||||||| || | || || ||||||| ||||| | | | |||| Sbjct: 851 atgtccctgacagaactatggatcgtcctgcataccatgatcattggaaccccatggctg 910 Query: 897 gcccatcagataataggcccttgcaaacagtgcaacccaccgatttccatcataaccatt 956 | ||||||||| |||| || |||||||| ||||||| | ||||| ||||||| ||||| Sbjct: 911 ggccatcagatgttaggtccatgcaaacaatgcaacctgctgattttcatcatagccatt 970 Query: 957 gggcgcatcttccccattcctatgcgcaatccaacagcaataacggggtgacggagcagc 1016 |||| ||| | |||||||| |||| ||| |||||||||||||| ||||||| Sbjct: 971 gggcacatgtgccccattcttatggtcaacccaacagcaataac---------gagcagc 1021 Query: 1017 caggggtcccttttggaacaatgagggctgcaaggatggatggtgatagccaacgtcgag 1076 |||| ||||||||||| || ||||||| | || | ||||||||||||||||| |||| Sbjct: 1022 caggaatcccttttggagca---agggctgtacgggtcgatggtgatagccaacgccgag 1078 Query: 1077 gatctgttgtttctccatcgtacttcagtaatggatctggctctagatctagagctccta 1136 ||||||||| |||||||| |||||||||||||||||||| || ||||||||| |||| | Sbjct: 1079 catctgttgtctctccatcttacttcagtaatggatctggttccagatctagacctccca 1138 Query: 1137 atgttcctcctctggtacctcagttcatgagggcacatggtagcatcaacgaacagtacc 1196 |||||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 1139 atgttcctcctctgatgcctcagttcatgagggctcatggcagcatcagcgaacagtacc 1198 Query: 1197 cgcagagttcatcatccagccttttcgctggagctcatagatcaggaggcatgcgacctg 1256 |||| ||||||||| ||| | || ||||| | ||||| ||||||||||||||||||| Sbjct: 1199 aacagaattcatcatctagcttatttgctgggggccataggtcaggaggcatgcgacctg 1258 Query: 1257 cccc 1260 |||| Sbjct: 1259 cccc 1262 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 gatttggtgggatccggccaag 238 |||||||||||||||||||||| Sbjct: 195 gatttggtgggatccggccaag 216
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 339 bits (171), Expect = 2e-89 Identities = 386/458 (84%), Gaps = 6/458 (1%) Strand = Plus / Minus Query: 1110 gatctggctctagatctagagctcctaatgttcctcctctggtacctcagttcatgaggg 1169 ||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 7862 gatctggttctagatctagagctcctaatgttcctcctatggtacctcaattcatgaggg 7803 Query: 1170 cacatggtagcatcaacgaacagtacccgcagagttcatcatccagccttttcgctggag 1229 | || || ||||| | |||||||||| ||||||||||||||||||| | || ||||| | Sbjct: 7802 cgcacggcagcattagtgaacagtaccagcagagttcatcatccagcttatttgctgggg 7743 Query: 1230 ctcatagatcaggaggcatgcgacctgcccctccgccacctcaaccggaaaacccaacat 1289 ||||||||||||||||||||||| |||| || ||||| |||| ||| || ||||| ||| Sbjct: 7742 ctcatagatcaggaggcatgcgaactgcaccgccgccccctctaccagagaacccggcat 7683 Query: 1290 tttgcctgttcccaccgggctcatccggtcatagttcaatggatactgatgaggctggag 1349 ||||||| |||||||| || ||||| || |||| || ||||| |||||||| || |||| Sbjct: 7682 tttgccttttcccaccaggttcatctggccataactcgatggagactgatgatgcaggag 7623 Query: 1350 gaagccgattctatgcctgggagcgcgatcgcttcgcgccgtacccattgatgccagtcg 1409 ||| |||||||||||||||||| || ||||||||||| || |||||| | |||||||| | Sbjct: 7622 gaaaccgattctatgcctgggaacgggatcgcttcgcaccatacccactaatgccagtgg 7563 Query: 1410 actgtgagacaagctggtggagctcacagcagtctcatggcgcatcagaatccacacccg 1469 |||||||||||| ||||||||| ||||| || |||||||| ||||||| ||||| Sbjct: 7562 actgtgagacaaactggtggagttcacaacaatctcatggtacatcaga------acccg 7509 Query: 1470 cacctgcgccgaggagactctttggccagtggatcggcctcggcaggtcgtcgcccgaga 1529 | ||||| || |||||||| ||||| || ||||| || | || || || || || || | Sbjct: 7508 cgcctgctccaaggagactatttgggcaatggattggtgttggaagatcatctccggaaa 7449 Query: 1530 atagatcacccgagggctcatcgtatcgacaaatgcac 1567 || ||||||||||||||||||||||||| ||||||||| Sbjct: 7448 atcgatcacccgagggctcatcgtatcggcaaatgcac 7411 Score = 327 bits (165), Expect = 8e-86 Identities = 349/409 (85%), Gaps = 6/409 (1%) Strand = Plus / Minus Query: 708 ttcatgactttatgggacaacatgtgtttccggagcaccta---tctgtatctgctgcac 764 |||||||||| |||||||||||| ||||| ||||||| || |||||||| |||||| Sbjct: 8780 ttcatgacttcatgggacaacatatgtttacggagcatgtagctgctgtatcttctgcac 8721 Query: 765 caggggca---catccttgcccatatgtggcatacttgcatcctcttccatcgctggcat 821 | |||||| ||||| ||||||||||||||||||||||||||||||||||| |||| | Sbjct: 8720 ctggggcagctcatccatgcccatatgtggcatacttgcatcctcttccatcattggcgt 8661 Query: 822 catcgtcaagctcccatgtccccgagagaactatggatggttccgcttatcatgatccct 881 |||| |||||||| ||||| || |||||||||||||||||| | || ||||||||||||| Sbjct: 8660 catcatcaagctctcatgttcctgagagaactatggatggtcctgcatatcatgatccct 8601 Query: 882 ggaatcacctagctggcccatcagataataggcccttgcaaacagtgcaacccaccgatt 941 || | | | | ||||| || |||||| ||||||||||||| |||||||||| | |||| Sbjct: 8600 ggcaccccttggctgggccttcagatggtaggcccttgcaatcagtgcaacctgctgatt 8541 Query: 942 tccatcataaccattgggcgcatcttccccattcctatgcgcaatccaacagcaataacg 1001 | ||||||||||||||||||||| ||||| |||||||| | ||| |||||| |||||| | Sbjct: 8540 ttcatcataaccattgggcgcatgttcccaattcctatcctcaacccaacaacaataatg 8481 Query: 1002 gggtgacggagcagccaggggtcccttttggaacaatgagggctgcaaggatggatggtg 1061 ||||| | ||||||| ||| |||||||||||||||| |||||||||||| | ||||||| Sbjct: 8480 gggtggccgagcagcaaggagtcccttttggaacaacgagggctgcaagagttgatggtg 8421 Query: 1062 atagccaacgtcgaggatctgttgtttctccatcgtacttcagtaatgg 1110 ||| ||||||||||||||| | |||||||||| |||||||||||||| Sbjct: 8420 atacccaacgtcgaggatcatctatttctccatcatacttcagtaatgg 8372 Score = 196 bits (99), Expect = 2e-46 Identities = 153/171 (89%) Strand = Plus / Minus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaa 508 |||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 11023 gattgcattggatcagcatttaatgccaaaggcgttatgcaatgccccaactgccgcaaa 10964 Query: 509 attgagaaagggaattggctctatgctaatggctcccgtccctcacaggatattaacatg 568 ||||| || ||||| ||||||||||| ||||| ||||| ||| |||| ||| |||| ||| Sbjct: 10963 attgaaaaggggaactggctctatgcaaatggttcccgacccacacaagatgttaatatg 10904 Query: 569 gatgagtgggctcatgaagaggacctctatgatgttagttactctgagatg 619 ||||||||||||||||| || ||||| ||||||||||||||||| |||||| Sbjct: 10903 gatgagtgggctcatgatgaagacctttatgatgttagttactcggagatg 10853 Score = 119 bits (60), Expect = 4e-23 Identities = 81/88 (92%) Strand = Plus / Minus Query: 360 tgtcgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcga 419 ||||||||||||||||||||||||| || || |||||| ||| ||||||||||||||||| Sbjct: 12786 tgtcgtgctcgatctgcctcgacgcggttgtcgccgccggcggggagaggtccacggcga 12727 Query: 420 ggctgcagtgcggtcacgagttccacct 447 |||||||||| || |||||||||||||| Sbjct: 12726 ggctgcagtgtggccacgagttccacct 12699 Score = 50.1 bits (25), Expect = 0.029 Identities = 28/29 (96%) Strand = Plus / Minus Query: 679 ggaaggagaatcatcacctccagttactt 707 |||||||||||||||||| |||||||||| Sbjct: 8891 ggaaggagaatcatcacccccagttactt 8863 Score = 50.1 bits (25), Expect = 0.029 Identities = 49/57 (85%) Strand = Plus / Minus Query: 623 tttcgttttcattggtgtccatttggtcgcttagcgcagcttccatcattctttgag 679 ||||| ||||| ||||| ||||||||||| || || || |||||||| ||||||||| Sbjct: 9987 tttcggtttcactggtgcccatttggtcgtttggctcaacttccatccttctttgag 9931 Score = 48.1 bits (24), Expect = 0.11 Identities = 53/60 (88%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 1750 ttttggtttggtttatgtgaattccgtctcgtacatatttgaaaatcaatttgggatatt 1809 ||||| |||||||||| ||| |||| || |||||||||||| ||||||| |||||||||| Sbjct: 7237 ttttgatttggtttat-tgagttccatcacgtacatatttg-aaatcaagttgggatatt 7180
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 339 bits (171), Expect = 2e-89 Identities = 386/458 (84%), Gaps = 6/458 (1%) Strand = Plus / Minus Query: 1110 gatctggctctagatctagagctcctaatgttcctcctctggtacctcagttcatgaggg 1169 ||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 117389 gatctggttctagatctagagctcctaatgttcctcctatggtacctcaattcatgaggg 117330 Query: 1170 cacatggtagcatcaacgaacagtacccgcagagttcatcatccagccttttcgctggag 1229 | || || ||||| | |||||||||| ||||||||||||||||||| | || ||||| | Sbjct: 117329 cgcacggcagcattagtgaacagtaccagcagagttcatcatccagcttatttgctgggg 117270 Query: 1230 ctcatagatcaggaggcatgcgacctgcccctccgccacctcaaccggaaaacccaacat 1289 ||||||||||||||||||||||| |||| || ||||| |||| ||| || ||||| ||| Sbjct: 117269 ctcatagatcaggaggcatgcgaactgcaccgccgccccctctaccagagaacccggcat 117210 Query: 1290 tttgcctgttcccaccgggctcatccggtcatagttcaatggatactgatgaggctggag 1349 ||||||| |||||||| || ||||| || |||| || ||||| |||||||| || |||| Sbjct: 117209 tttgccttttcccaccaggttcatctggccataactcgatggagactgatgatgcaggag 117150 Query: 1350 gaagccgattctatgcctgggagcgcgatcgcttcgcgccgtacccattgatgccagtcg 1409 ||| |||||||||||||||||| || ||||||||||| || |||||| | |||||||| | Sbjct: 117149 gaaaccgattctatgcctgggaacgggatcgcttcgcaccatacccactaatgccagtgg 117090 Query: 1410 actgtgagacaagctggtggagctcacagcagtctcatggcgcatcagaatccacacccg 1469 |||||||||||| ||||||||| ||||| || |||||||| ||||||| ||||| Sbjct: 117089 actgtgagacaaactggtggagttcacaacaatctcatggtacatcaga------acccg 117036 Query: 1470 cacctgcgccgaggagactctttggccagtggatcggcctcggcaggtcgtcgcccgaga 1529 | ||||| || |||||||| ||||| || ||||| || | || || || || || || | Sbjct: 117035 cgcctgctccaaggagactatttgggcaatggattggtgttggaagatcatctccggaaa 116976 Query: 1530 atagatcacccgagggctcatcgtatcgacaaatgcac 1567 || ||||||||||||||||||||||||| ||||||||| Sbjct: 116975 atcgatcacccgagggctcatcgtatcggcaaatgcac 116938 Score = 327 bits (165), Expect = 8e-86 Identities = 349/409 (85%), Gaps = 6/409 (1%) Strand = Plus / Minus Query: 708 ttcatgactttatgggacaacatgtgtttccggagcaccta---tctgtatctgctgcac 764 |||||||||| |||||||||||| ||||| ||||||| || |||||||| |||||| Sbjct: 118307 ttcatgacttcatgggacaacatatgtttacggagcatgtagctgctgtatcttctgcac 118248 Query: 765 caggggca---catccttgcccatatgtggcatacttgcatcctcttccatcgctggcat 821 | |||||| ||||| ||||||||||||||||||||||||||||||||||| |||| | Sbjct: 118247 ctggggcagctcatccatgcccatatgtggcatacttgcatcctcttccatcattggcgt 118188 Query: 822 catcgtcaagctcccatgtccccgagagaactatggatggttccgcttatcatgatccct 881 |||| |||||||| ||||| || |||||||||||||||||| | || ||||||||||||| Sbjct: 118187 catcatcaagctctcatgttcctgagagaactatggatggtcctgcatatcatgatccct 118128 Query: 882 ggaatcacctagctggcccatcagataataggcccttgcaaacagtgcaacccaccgatt 941 || | | | | ||||| || |||||| ||||||||||||| |||||||||| | |||| Sbjct: 118127 ggcaccccttggctgggccttcagatggtaggcccttgcaatcagtgcaacctgctgatt 118068 Query: 942 tccatcataaccattgggcgcatcttccccattcctatgcgcaatccaacagcaataacg 1001 | ||||||||||||||||||||| ||||| |||||||| | ||| |||||| |||||| | Sbjct: 118067 ttcatcataaccattgggcgcatgttcccaattcctatcctcaacccaacaacaataatg 118008 Query: 1002 gggtgacggagcagccaggggtcccttttggaacaatgagggctgcaaggatggatggtg 1061 ||||| | ||||||| ||| |||||||||||||||| |||||||||||| | ||||||| Sbjct: 118007 gggtggccgagcagcaaggagtcccttttggaacaacgagggctgcaagagttgatggtg 117948 Query: 1062 atagccaacgtcgaggatctgttgtttctccatcgtacttcagtaatgg 1110 ||| ||||||||||||||| | |||||||||| |||||||||||||| Sbjct: 117947 atacccaacgtcgaggatcatctatttctccatcatacttcagtaatgg 117899 Score = 196 bits (99), Expect = 2e-46 Identities = 153/171 (89%) Strand = Plus / Minus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaa 508 |||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 120550 gattgcattggatcagcatttaatgccaaaggcgttatgcaatgccccaactgccgcaaa 120491 Query: 509 attgagaaagggaattggctctatgctaatggctcccgtccctcacaggatattaacatg 568 ||||| || ||||| ||||||||||| ||||| ||||| ||| |||| ||| |||| ||| Sbjct: 120490 attgaaaaggggaactggctctatgcaaatggttcccgacccacacaagatgttaatatg 120431 Query: 569 gatgagtgggctcatgaagaggacctctatgatgttagttactctgagatg 619 ||||||||||||||||| || ||||| ||||||||||||||||| |||||| Sbjct: 120430 gatgagtgggctcatgatgaagacctttatgatgttagttactcggagatg 120380 Score = 119 bits (60), Expect = 4e-23 Identities = 81/88 (92%) Strand = Plus / Minus Query: 360 tgtcgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcga 419 ||||||||||||||||||||||||| || || |||||| ||| ||||||||||||||||| Sbjct: 122313 tgtcgtgctcgatctgcctcgacgcggttgtcgccgccggcggggagaggtccacggcga 122254 Query: 420 ggctgcagtgcggtcacgagttccacct 447 |||||||||| || |||||||||||||| Sbjct: 122253 ggctgcagtgtggccacgagttccacct 122226 Score = 50.1 bits (25), Expect = 0.029 Identities = 28/29 (96%) Strand = Plus / Minus Query: 679 ggaaggagaatcatcacctccagttactt 707 |||||||||||||||||| |||||||||| Sbjct: 118418 ggaaggagaatcatcacccccagttactt 118390 Score = 50.1 bits (25), Expect = 0.029 Identities = 49/57 (85%) Strand = Plus / Minus Query: 623 tttcgttttcattggtgtccatttggtcgcttagcgcagcttccatcattctttgag 679 ||||| ||||| ||||| ||||||||||| || || || |||||||| ||||||||| Sbjct: 119514 tttcggtttcactggtgcccatttggtcgtttggctcaacttccatccttctttgag 119458 Score = 48.1 bits (24), Expect = 0.11 Identities = 53/60 (88%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 1750 ttttggtttggtttatgtgaattccgtctcgtacatatttgaaaatcaatttgggatatt 1809 ||||| |||||||||| ||| |||| || |||||||||||| ||||||| |||||||||| Sbjct: 116764 ttttgatttggtttat-tgagttccatcacgtacatatttg-aaatcaagttgggatatt 116707
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 339 bits (171), Expect = 2e-89 Identities = 386/458 (84%), Gaps = 6/458 (1%) Strand = Plus / Minus Query: 1110 gatctggctctagatctagagctcctaatgttcctcctctggtacctcagttcatgaggg 1169 ||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 3130145 gatctggttctagatctagagctcctaatgttcctcctatggtacctcaattcatgaggg 3130086 Query: 1170 cacatggtagcatcaacgaacagtacccgcagagttcatcatccagccttttcgctggag 1229 | || || ||||| | |||||||||| ||||||||||||||||||| | || ||||| | Sbjct: 3130085 cgcacggcagcattagtgaacagtaccagcagagttcatcatccagcttatttgctgggg 3130026 Query: 1230 ctcatagatcaggaggcatgcgacctgcccctccgccacctcaaccggaaaacccaacat 1289 ||||||||||||||||||||||| |||| || ||||| |||| ||| || ||||| ||| Sbjct: 3130025 ctcatagatcaggaggcatgcgaactgcaccgccgccccctctaccagagaacccggcat 3129966 Query: 1290 tttgcctgttcccaccgggctcatccggtcatagttcaatggatactgatgaggctggag 1349 ||||||| |||||||| || ||||| || |||| || ||||| |||||||| || |||| Sbjct: 3129965 tttgccttttcccaccaggttcatctggccataactcgatggagactgatgatgcaggag 3129906 Query: 1350 gaagccgattctatgcctgggagcgcgatcgcttcgcgccgtacccattgatgccagtcg 1409 ||| |||||||||||||||||| || ||||||||||| || |||||| | |||||||| | Sbjct: 3129905 gaaaccgattctatgcctgggaacgggatcgcttcgcaccatacccactaatgccagtgg 3129846 Query: 1410 actgtgagacaagctggtggagctcacagcagtctcatggcgcatcagaatccacacccg 1469 |||||||||||| ||||||||| ||||| || |||||||| ||||||| ||||| Sbjct: 3129845 actgtgagacaaactggtggagttcacaacaatctcatggtacatcaga------acccg 3129792 Query: 1470 cacctgcgccgaggagactctttggccagtggatcggcctcggcaggtcgtcgcccgaga 1529 | ||||| || |||||||| ||||| || ||||| || | || || || || || || | Sbjct: 3129791 cgcctgctccaaggagactatttgggcaatggattggtgttggaagatcatctccggaaa 3129732 Query: 1530 atagatcacccgagggctcatcgtatcgacaaatgcac 1567 || ||||||||||||||||||||||||| ||||||||| Sbjct: 3129731 atcgatcacccgagggctcatcgtatcggcaaatgcac 3129694 Score = 327 bits (165), Expect = 8e-86 Identities = 349/409 (85%), Gaps = 6/409 (1%) Strand = Plus / Minus Query: 708 ttcatgactttatgggacaacatgtgtttccggagcaccta---tctgtatctgctgcac 764 |||||||||| |||||||||||| ||||| ||||||| || |||||||| |||||| Sbjct: 3131063 ttcatgacttcatgggacaacatatgtttacggagcatgtagctgctgtatcttctgcac 3131004 Query: 765 caggggca---catccttgcccatatgtggcatacttgcatcctcttccatcgctggcat 821 | |||||| ||||| ||||||||||||||||||||||||||||||||||| |||| | Sbjct: 3131003 ctggggcagctcatccatgcccatatgtggcatacttgcatcctcttccatcattggcgt 3130944 Query: 822 catcgtcaagctcccatgtccccgagagaactatggatggttccgcttatcatgatccct 881 |||| |||||||| ||||| || |||||||||||||||||| | || ||||||||||||| Sbjct: 3130943 catcatcaagctctcatgttcctgagagaactatggatggtcctgcatatcatgatccct 3130884 Query: 882 ggaatcacctagctggcccatcagataataggcccttgcaaacagtgcaacccaccgatt 941 || | | | | ||||| || |||||| ||||||||||||| |||||||||| | |||| Sbjct: 3130883 ggcaccccttggctgggccttcagatggtaggcccttgcaatcagtgcaacctgctgatt 3130824 Query: 942 tccatcataaccattgggcgcatcttccccattcctatgcgcaatccaacagcaataacg 1001 | ||||||||||||||||||||| ||||| |||||||| | ||| |||||| |||||| | Sbjct: 3130823 ttcatcataaccattgggcgcatgttcccaattcctatcctcaacccaacaacaataatg 3130764 Query: 1002 gggtgacggagcagccaggggtcccttttggaacaatgagggctgcaaggatggatggtg 1061 ||||| | ||||||| ||| |||||||||||||||| |||||||||||| | ||||||| Sbjct: 3130763 gggtggccgagcagcaaggagtcccttttggaacaacgagggctgcaagagttgatggtg 3130704 Query: 1062 atagccaacgtcgaggatctgttgtttctccatcgtacttcagtaatgg 1110 ||| ||||||||||||||| | |||||||||| |||||||||||||| Sbjct: 3130703 atacccaacgtcgaggatcatctatttctccatcatacttcagtaatgg 3130655 Score = 196 bits (99), Expect = 2e-46 Identities = 153/171 (89%) Strand = Plus / Minus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaa 508 |||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 3133306 gattgcattggatcagcatttaatgccaaaggcgttatgcaatgccccaactgccgcaaa 3133247 Query: 509 attgagaaagggaattggctctatgctaatggctcccgtccctcacaggatattaacatg 568 ||||| || ||||| ||||||||||| ||||| ||||| ||| |||| ||| |||| ||| Sbjct: 3133246 attgaaaaggggaactggctctatgcaaatggttcccgacccacacaagatgttaatatg 3133187 Query: 569 gatgagtgggctcatgaagaggacctctatgatgttagttactctgagatg 619 ||||||||||||||||| || ||||| ||||||||||||||||| |||||| Sbjct: 3133186 gatgagtgggctcatgatgaagacctttatgatgttagttactcggagatg 3133136 Score = 119 bits (60), Expect = 4e-23 Identities = 81/88 (92%) Strand = Plus / Minus Query: 360 tgtcgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcga 419 ||||||||||||||||||||||||| || || |||||| ||| ||||||||||||||||| Sbjct: 3135069 tgtcgtgctcgatctgcctcgacgcggttgtcgccgccggcggggagaggtccacggcga 3135010 Query: 420 ggctgcagtgcggtcacgagttccacct 447 |||||||||| || |||||||||||||| Sbjct: 3135009 ggctgcagtgtggccacgagttccacct 3134982 Score = 50.1 bits (25), Expect = 0.029 Identities = 28/29 (96%) Strand = Plus / Minus Query: 679 ggaaggagaatcatcacctccagttactt 707 |||||||||||||||||| |||||||||| Sbjct: 3131174 ggaaggagaatcatcacccccagttactt 3131146 Score = 50.1 bits (25), Expect = 0.029 Identities = 49/57 (85%) Strand = Plus / Minus Query: 623 tttcgttttcattggtgtccatttggtcgcttagcgcagcttccatcattctttgag 679 ||||| ||||| ||||| ||||||||||| || || || |||||||| ||||||||| Sbjct: 3132270 tttcggtttcactggtgcccatttggtcgtttggctcaacttccatccttctttgag 3132214 Score = 48.1 bits (24), Expect = 0.11 Identities = 53/60 (88%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 1750 ttttggtttggtttatgtgaattccgtctcgtacatatttgaaaatcaatttgggatatt 1809 ||||| |||||||||| ||| |||| || |||||||||||| ||||||| |||||||||| Sbjct: 3129520 ttttgatttggtttat-tgagttccatcacgtacatatttg-aaatcaagttgggatatt 3129463
>gb|AY108590.1| Zea mays PCO110089 mRNA sequence Length = 1070 Score = 234 bits (118), Expect = 9e-58 Identities = 270/320 (84%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 1122 gatctagagctcctaatgttcctcctctggtacctcagttcatgagggcacatggtagca 1181 |||||||| |||| | ||||||||||||| | ||||||||||||||||| ||||| |||| Sbjct: 61 gatctagacctcccagtgttcctcctctgatgcctcagttcatgagggcccatggcagca 120 Query: 1182 tcaacgaacagtacccgcagagttcatcatccagccttttcgctggagctcatagatcag 1241 |||| ||||| |||| |||| ||||||||| ||||| || ||||| || ||||| |||| Sbjct: 121 tcaatgaacaataccaacagaattcatcatctagcctatttgctggggcacataggtcag 180 Query: 1242 gaggcatgcgacctgcccctccgccacctcaaccggaaaacccaacattttgcctgttcc 1301 |||||||||||||||| || | |||||| ||| || ||||| || |||| | |||||| Sbjct: 181 gaggcatgcgacctgcgcc---gacacctctaccagagaaccccaccttttccttgttcc 237 Query: 1302 caccgggctcatccggtcatagttcaatggatactgatgaggctggaggaagccgattct 1361 ||||||| |||||||| |||||||| ||||| |||||||| ||||||||||||| |||| Sbjct: 238 caccgggttcatccggccatagttcgatggagactgatgacgctggaggaagccagttct 297 Query: 1362 atgcctgggagcgcgatcgcttcgcgccgtacccattgatgccagtcgactgtgagacaa 1421 ||||||||||||| || || ||||| || | || |||||||| || ||||| |||| || Sbjct: 298 atgcctgggagcgtgaccggttcgccccatttccgttgatgcctgtggactgcgagataa 357 Query: 1422 gctggtggagctcacagcag 1441 ||||||||| |||||||||| Sbjct: 358 gctggtggacctcacagcag 377 Score = 79.8 bits (40), Expect = 3e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 1503 tcggcctcggcaggtcgtcgcccgagaatagatcacccgagggctcatcgtatcgacaaa 1562 ||||| || |||||||||| || ||||| ||||| ||||||||||| |||||||| |||| Sbjct: 598 tcggcgtcagcaggtcgtcccctgagaacagatcgcccgagggctcttcgtatcggcaaa 657 Query: 1563 tgcactctcctcggatgtag 1582 ||||||| || ||||||||| Sbjct: 658 tgcactcgccacggatgtag 677 Score = 75.8 bits (38), Expect = 5e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 1061 gatagccaacgtcgaggatctgttgtttctccatcgtacttcagtaatggatct 1114 ||||||||||||||| |||||||||||||||||| |||||||| ||||||||| Sbjct: 12 gatagccaacgtcgaatatctgttgtttctccatcttacttcagcaatggatct 65 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1503 tcggcctcggcaggtcgtcgcccgagaatagatcacccgagggctcatcgtatcgacaaa 1562 ||||| ||||||||||||| || || |||||| ||||||||||||| |||||||| |||| Sbjct: 436 tcggcgtcggcaggtcgtcccctgaaaatagaccacccgagggctcttcgtatcggcaaa 495 Query: 1563 tg 1564 || Sbjct: 496 tg 497 Score = 65.9 bits (33), Expect = 5e-07 Identities = 52/57 (91%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 1750 ttttggtttggtttatgtgaattccgtctcgtacatatttgaaaatcaatttgggat 1806 ||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 834 ttttgatttggtttatgtgaattctatctcgtacatatttg-aaatcaagttgggat 889 Score = 46.1 bits (23), Expect = 0.45 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1398 tgatgccagtcgactgtgagacaagctggtggagctcacagca 1440 ||||||| || ||||| ||||||||||||||| ||||||||| Sbjct: 496 tgatgcctgtggactgcgagacaagctggtggtcctcacagca 538 Score = 46.1 bits (23), Expect = 0.45 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1619 atttggaacctgagttgcttgtaagaaaagatggg 1653 |||||||||| ||| ||||||||||||| |||||| Sbjct: 704 atttggaacccgagatgcttgtaagaaacgatggg 738
>ref|NM_001049517.1| Oryza sativa (japonica cultivar-group) Os01g0350900 (Os01g0350900) mRNA, partial cds Length = 2299 Score = 224 bits (113), Expect = 9e-55 Identities = 176/197 (89%) Strand = Plus / Plus Query: 363 cgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcgaggc 422 |||||||||||||||||||||| || || |||| | ||| ||| |||||||||||||||| Sbjct: 363 cgtgctcgatctgcctcgacgcggtggtcgccggcggcggggacaggtccacggcgaggc 422 Query: 423 tgcagtgcggtcacgagttccaccttgattgcattggatcggcattcaatgccaaaggag 482 |||||||||| |||||||||||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 423 tgcagtgcggccacgagttccacctcgattgcattggttcagcatttaatgccaaaggag 482 Query: 483 ttatgcaatgcccgaactgccgcaaaattgagaaagggaattggctctatgctaatggct 542 ||||||||||||| ||||| ||| ||||||||| ||||||||||||||||| ||||| | Sbjct: 483 ttatgcaatgccccaactgtcgccaaattgagagggggaattggctctatgcaaatggtt 542 Query: 543 cccgtccctcacaggat 559 | ||||| ||||||||| Sbjct: 543 cgcgtccatcacaggat 559 Score = 95.6 bits (48), Expect = 5e-16 Identities = 177/220 (80%) Strand = Plus / Plus Query: 780 gcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagctcccatg 839 |||||||| | || ||||| || ||||||| ||| ||||||||| ||||| ||||||| Sbjct: 798 gcccatatatcgcttactttcagcctcttcaatcatcggcatcatcatcaagttcccatg 857 Query: 840 tccccgagagaactatggatggttccgcttatcatgatccctggaatcacctagctggcc 899 || | || |||||||||||||| || | |||||||||| |||||| | |||| |||| | Sbjct: 858 tcactgaaagaactatggatggcaccacctatcatgatcactggaaccccctacctgggc 917 Query: 900 catcagataataggcccttgcaaacagtgcaacccaccgatttccatcataaccattggg 959 |||||||| | | || ||| |||||||| |||| ||||||||||||||||| ||| Sbjct: 918 catcagatggtcgaccattggctacagtgcatcccattgatttccatcataaccactgga 977 Query: 960 cgcatcttccccattcctatgcgcaatccaacagcaataa 999 |||| || ||| | |||||| | ||| ||||||||||||| Sbjct: 978 cgcacctgcccaactcctattctcaacccaacagcaataa 1017 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1138 tgttcctcctctggtacctcagttcatgagggcacatggtagcatcaacgaaca 1191 |||||||||| ||| ||| || ||||||||| | ||||||| |||||||||||| Sbjct: 1580 tgttcctcctatggcaccacaattcatgaggccgcatggtaacatcaacgaaca 1633
>dbj|AK070217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E12, full insert sequence Length = 2298 Score = 224 bits (113), Expect = 9e-55 Identities = 176/197 (89%) Strand = Plus / Plus Query: 363 cgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcgaggc 422 |||||||||||||||||||||| || || |||| | ||| ||| |||||||||||||||| Sbjct: 363 cgtgctcgatctgcctcgacgcggtggtcgccggcggcggggacaggtccacggcgaggc 422 Query: 423 tgcagtgcggtcacgagttccaccttgattgcattggatcggcattcaatgccaaaggag 482 |||||||||| |||||||||||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 423 tgcagtgcggccacgagttccacctcgattgcattggttcagcatttaatgccaaaggag 482 Query: 483 ttatgcaatgcccgaactgccgcaaaattgagaaagggaattggctctatgctaatggct 542 ||||||||||||| ||||| ||| ||||||||| ||||||||||||||||| ||||| | Sbjct: 483 ttatgcaatgccccaactgtcgccaaattgagagggggaattggctctatgcaaatggtt 542 Query: 543 cccgtccctcacaggat 559 | ||||| ||||||||| Sbjct: 543 cgcgtccatcacaggat 559 Score = 95.6 bits (48), Expect = 5e-16 Identities = 177/220 (80%) Strand = Plus / Plus Query: 780 gcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagctcccatg 839 |||||||| | || ||||| || ||||||| ||| ||||||||| ||||| ||||||| Sbjct: 798 gcccatatatcgcttactttcagcctcttcaatcatcggcatcatcatcaagttcccatg 857 Query: 840 tccccgagagaactatggatggttccgcttatcatgatccctggaatcacctagctggcc 899 || | || |||||||||||||| || | |||||||||| |||||| | |||| |||| | Sbjct: 858 tcactgaaagaactatggatggcaccacctatcatgatcactggaaccccctacctgggc 917 Query: 900 catcagataataggcccttgcaaacagtgcaacccaccgatttccatcataaccattggg 959 |||||||| | | || ||| |||||||| |||| ||||||||||||||||| ||| Sbjct: 918 catcagatggtcgaccattggctacagtgcatcccattgatttccatcataaccactgga 977 Query: 960 cgcatcttccccattcctatgcgcaatccaacagcaataa 999 |||| || ||| | |||||| | ||| ||||||||||||| Sbjct: 978 cgcacctgcccaactcctattctcaacccaacagcaataa 1017 Score = 44.1 bits (22), Expect = 1.8 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1138 tgttcctcctctggtacctcagttcatgagggcacatggtagcatcaacgaaca 1191 |||| ||||| ||| ||| || ||||||||| | ||||||| |||||||||||| Sbjct: 1579 tgtttctcctatggcaccacaattcatgaggccgcatggtaacatcaacgaaca 1632
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 125 bits (63), Expect = 6e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaa 508 ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| ||| || Sbjct: 13999483 gattgcattggttcagcatttaatgccaaaggagttatgcaatgccccaactgtcgccaa 13999542 Query: 509 attgagaaagggaattggctctatgctaatggctcccgtccctcacaggat 559 ||||||| ||||||||||||||||| ||||| || ||||| ||||||||| Sbjct: 13999543 attgagagggggaattggctctatgcaaatggttcgcgtccatcacaggat 13999593 Score = 105 bits (53), Expect = 6e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 363 cgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcgaggc 422 |||||||||||||||||||||| || || |||| | ||| ||| |||||||||||||||| Sbjct: 13995758 cgtgctcgatctgcctcgacgcggtggtcgccggcggcggggacaggtccacggcgaggc 13995817 Query: 423 tgcagtgcggtcacgagttccacct 447 |||||||||| |||||||||||||| Sbjct: 13995818 tgcagtgcggccacgagttccacct 13995842 Score = 95.6 bits (48), Expect = 5e-16 Identities = 177/220 (80%) Strand = Plus / Plus Query: 780 gcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagctcccatg 839 |||||||| | || ||||| || ||||||| ||| ||||||||| ||||| ||||||| Sbjct: 14000814 gcccatatatcgcttactttcagcctcttcaatcatcggcatcatcatcaagttcccatg 14000873 Query: 840 tccccgagagaactatggatggttccgcttatcatgatccctggaatcacctagctggcc 899 || | || |||||||||||||| || | |||||||||| |||||| | |||| |||| | Sbjct: 14000874 tcactgaaagaactatggatggcaccacctatcatgatcactggaaccccctacctgggc 14000933 Query: 900 catcagataataggcccttgcaaacagtgcaacccaccgatttccatcataaccattggg 959 |||||||| | | || ||| |||||||| |||| ||||||||||||||||| ||| Sbjct: 14000934 catcagatggtcgaccattggctacagtgcatcccattgatttccatcataaccactgga 14000993 Query: 960 cgcatcttccccattcctatgcgcaatccaacagcaataa 999 |||| || ||| | |||||| | ||| ||||||||||||| Sbjct: 14000994 cgcacctgcccaactcctattctcaacccaacagcaataa 14001033 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1138 tgttcctcctctggtacctcagttcatgagggcacatggtagcatcaacgaaca 1191 |||||||||| ||| ||| || ||||||||| | ||||||| |||||||||||| Sbjct: 14001596 tgttcctcctatggcaccacaattcatgaggccgcatggtaacatcaacgaaca 14001649
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 125 bits (63), Expect = 6e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaa 508 ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| ||| || Sbjct: 159785 gattgcattggttcagcatttaatgccaaaggagttatgcaatgccccaactgtcgccaa 159844 Query: 509 attgagaaagggaattggctctatgctaatggctcccgtccctcacaggat 559 ||||||| ||||||||||||||||| ||||| || ||||| ||||||||| Sbjct: 159845 attgagagggggaattggctctatgcaaatggttcgcgtccatcacaggat 159895 Score = 105 bits (53), Expect = 6e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 363 cgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcgaggc 422 |||||||||||||||||||||| || || |||| | ||| ||| |||||||||||||||| Sbjct: 156060 cgtgctcgatctgcctcgacgcggtggtcgccggcggcggggacaggtccacggcgaggc 156119 Query: 423 tgcagtgcggtcacgagttccacct 447 |||||||||| |||||||||||||| Sbjct: 156120 tgcagtgcggccacgagttccacct 156144 Score = 95.6 bits (48), Expect = 5e-16 Identities = 177/220 (80%) Strand = Plus / Plus Query: 780 gcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagctcccatg 839 |||||||| | || ||||| || ||||||| ||| ||||||||| ||||| ||||||| Sbjct: 161116 gcccatatatcgcttactttcagcctcttcaatcatcggcatcatcatcaagttcccatg 161175 Query: 840 tccccgagagaactatggatggttccgcttatcatgatccctggaatcacctagctggcc 899 || | || |||||||||||||| || | |||||||||| |||||| | |||| |||| | Sbjct: 161176 tcactgaaagaactatggatggcaccacctatcatgatcactggaaccccctacctgggc 161235 Query: 900 catcagataataggcccttgcaaacagtgcaacccaccgatttccatcataaccattggg 959 |||||||| | | || ||| |||||||| |||| ||||||||||||||||| ||| Sbjct: 161236 catcagatggtcgaccattggctacagtgcatcccattgatttccatcataaccactgga 161295 Query: 960 cgcatcttccccattcctatgcgcaatccaacagcaataa 999 |||| || ||| | |||||| | ||| ||||||||||||| Sbjct: 161296 cgcacctgcccaactcctattctcaacccaacagcaataa 161335 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1138 tgttcctcctctggtacctcagttcatgagggcacatggtagcatcaacgaaca 1191 |||||||||| ||| ||| || ||||||||| | ||||||| |||||||||||| Sbjct: 161898 tgttcctcctatggcaccacaattcatgaggccgcatggtaacatcaacgaaca 161951
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 125 bits (63), Expect = 6e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaa 508 ||||||||||| || ||||| |||||||||||||||||||||||||| ||||| ||| || Sbjct: 75228 gattgcattggttcagcatttaatgccaaaggagttatgcaatgccccaactgtcgccaa 75287 Query: 509 attgagaaagggaattggctctatgctaatggctcccgtccctcacaggat 559 ||||||| ||||||||||||||||| ||||| || ||||| ||||||||| Sbjct: 75288 attgagagggggaattggctctatgcaaatggttcgcgtccatcacaggat 75338 Score = 105 bits (53), Expect = 6e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 363 cgtgctcgatctgcctcgacgctgtcgttgccgccagcgcggagaggtccacggcgaggc 422 |||||||||||||||||||||| || || |||| | ||| ||| |||||||||||||||| Sbjct: 71503 cgtgctcgatctgcctcgacgcggtggtcgccggcggcggggacaggtccacggcgaggc 71562 Query: 423 tgcagtgcggtcacgagttccacct 447 |||||||||| |||||||||||||| Sbjct: 71563 tgcagtgcggccacgagttccacct 71587 Score = 95.6 bits (48), Expect = 5e-16 Identities = 177/220 (80%) Strand = Plus / Plus Query: 780 gcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagctcccatg 839 |||||||| | || ||||| || ||||||| ||| ||||||||| ||||| ||||||| Sbjct: 76559 gcccatatatcgcttactttcagcctcttcaatcatcggcatcatcatcaagttcccatg 76618 Query: 840 tccccgagagaactatggatggttccgcttatcatgatccctggaatcacctagctggcc 899 || | || |||||||||||||| || | |||||||||| |||||| | |||| |||| | Sbjct: 76619 tcactgaaagaactatggatggcaccacctatcatgatcactggaaccccctacctgggc 76678 Query: 900 catcagataataggcccttgcaaacagtgcaacccaccgatttccatcataaccattggg 959 |||||||| | | || ||| |||||||| |||| ||||||||||||||||| ||| Sbjct: 76679 catcagatggtcgaccattggctacagtgcatcccattgatttccatcataaccactgga 76738 Query: 960 cgcatcttccccattcctatgcgcaatccaacagcaataa 999 |||| || ||| | |||||| | ||| ||||||||||||| Sbjct: 76739 cgcacctgcccaactcctattctcaacccaacagcaataa 76778 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1138 tgttcctcctctggtacctcagttcatgagggcacatggtagcatcaacgaaca 1191 |||||||||| ||| ||| || ||||||||| | ||||||| |||||||||||| Sbjct: 77341 tgttcctcctatggcaccacaattcatgaggccgcatggtaacatcaacgaaca 77394
>emb|CT833602.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107E23, full insert sequence Length = 1638 Score = 105 bits (53), Expect = 6e-19 Identities = 113/133 (84%) Strand = Plus / Plus Query: 401 gcggagaggtccacggcgaggctgcagtgcggtcacgagttccaccttgattgcattgga 460 |||| ||||||||| ||| ||||||||||||| |||||||||||||| || ||||||||| Sbjct: 173 gcggcgaggtccaccgcgcggctgcagtgcggccacgagttccacctagactgcattgga 232 Query: 461 tcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaaattgagaaaggg 520 || ||||| ||||| ||||| || ||||| ||||| || || || || ||||||||||| Sbjct: 233 tctgcatttaatgcaaaaggggtgatgcagtgcccaaattgtcggaatattgagaaaggt 292 Query: 521 aattggctctatg 533 | |||||||||| Sbjct: 293 cactggctctatg 305
>ref|NM_001070172.1| Oryza sativa (japonica cultivar-group) Os09g0511500 (Os09g0511500) mRNA, complete cds Length = 1670 Score = 105 bits (53), Expect = 6e-19 Identities = 113/133 (84%) Strand = Plus / Plus Query: 401 gcggagaggtccacggcgaggctgcagtgcggtcacgagttccaccttgattgcattgga 460 |||| ||||||||| ||| ||||||||||||| |||||||||||||| || ||||||||| Sbjct: 175 gcggcgaggtccaccgcgcggctgcagtgcggccacgagttccacctagactgcattgga 234 Query: 461 tcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaaattgagaaaggg 520 || ||||| ||||| ||||| || ||||| ||||| || || || || ||||||||||| Sbjct: 235 tctgcatttaatgcaaaaggggtgatgcagtgcccaaattgtcggaatattgagaaaggt 294 Query: 521 aattggctctatg 533 | |||||||||| Sbjct: 295 cactggctctatg 307
>dbj|AK072997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148H24, full insert sequence Length = 1635 Score = 105 bits (53), Expect = 6e-19 Identities = 113/133 (84%) Strand = Plus / Plus Query: 401 gcggagaggtccacggcgaggctgcagtgcggtcacgagttccaccttgattgcattgga 460 |||| ||||||||| ||| ||||||||||||| |||||||||||||| || ||||||||| Sbjct: 176 gcggcgaggtccaccgcgcggctgcagtgcggccacgagttccacctagactgcattgga 235 Query: 461 tcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaaattgagaaaggg 520 || ||||| ||||| ||||| || ||||| ||||| || || || || ||||||||||| Sbjct: 236 tctgcatttaatgcaaaaggggtgatgcagtgcccaaattgtcggaatattgagaaaggt 295 Query: 521 aattggctctatg 533 | |||||||||| Sbjct: 296 cactggctctatg 308
>dbj|AK060504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E04, full insert sequence Length = 1670 Score = 105 bits (53), Expect = 6e-19 Identities = 113/133 (84%) Strand = Plus / Plus Query: 401 gcggagaggtccacggcgaggctgcagtgcggtcacgagttccaccttgattgcattgga 460 |||| ||||||||| ||| ||||||||||||| |||||||||||||| || ||||||||| Sbjct: 175 gcggcgaggtccaccgcgcggctgcagtgcggccacgagttccacctagactgcattgga 234 Query: 461 tcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaaattgagaaaggg 520 || ||||| ||||| ||||| || ||||| ||||| || || || || ||||||||||| Sbjct: 235 tctgcatttaatgcaaaaggggtgatgcagtgcccaaattgtcggaatattgagaaaggt 294 Query: 521 aattggctctatg 533 | |||||||||| Sbjct: 295 cactggctctatg 307
>dbj|AK058986.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-E07, full insert sequence Length = 1315 Score = 95.6 bits (48), Expect = 5e-16 Identities = 177/220 (80%) Strand = Plus / Plus Query: 780 gcccatatgtggcatacttgcatcctcttccatcgctggcatcatcgtcaagctcccatg 839 |||||||| | || ||||| || ||||||| ||| ||||||||| ||||| ||||||| Sbjct: 244 gcccatatatcgcttactttcagcctcttcaatcatcggcatcatcatcaagttcccatg 303 Query: 840 tccccgagagaactatggatggttccgcttatcatgatccctggaatcacctagctggcc 899 || | || |||||||||||||| || | |||||||||| |||||| | |||| |||| | Sbjct: 304 tcactgaaagaactatggatggcaccacctatcatgatcactggaaccccctacctgggc 363 Query: 900 catcagataataggcccttgcaaacagtgcaacccaccgatttccatcataaccattggg 959 |||||||| | | || ||| |||||||| |||| ||||||||||||||||| ||| Sbjct: 364 catcagatggtcgaccattggctacagtgcatcccattgatttccatcataaccactgga 423 Query: 960 cgcatcttccccattcctatgcgcaatccaacagcaataa 999 |||| || ||| | |||||| | ||| ||||||||||||| Sbjct: 424 cgcacctgcccaactcctattctcaacccaacagcaataa 463 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 1106 aatggatctggctctagatctagagctcctaatgttcctcctctggtacctcagttcatg 1165 ||||||||||| || || |||||| ||| | |||||||||| ||| ||| || |||||| Sbjct: 564 aatggatctggatcaaggtctagaattccaagtgttcctcctatggcaccacaattcatg 623 Query: 1166 agggcacatggtagcatcaacgaaca 1191 ||| | ||||||| |||||||||||| Sbjct: 624 aggccgcatggtaacatcaacgaaca 649
>gb|BT018568.1| Zea mays clone EL01N0442C04.d mRNA sequence Length = 1639 Score = 93.7 bits (47), Expect = 2e-15 Identities = 86/99 (86%) Strand = Plus / Plus Query: 421 gctgcagtgcggtcacgagttccaccttgattgcattggatcggcattcaatgccaaagg 480 |||||| ||||| |||||||||||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 222 gctgcaatgcggacacgagttccacctagattgtattgggtctgcattcaatgcaaaagg 281 Query: 481 agttatgcaatgcccgaactgccgcaaaattgagaaagg 519 || ||||||||||| ||||| || || ||||||||||| Sbjct: 282 agcgatgcaatgccctaactgtcggaagattgagaaagg 320
>ref|NM_001068911.1| Oryza sativa (japonica cultivar-group) Os08g0539300 (Os08g0539300) mRNA, complete cds Length = 1679 Score = 89.7 bits (45), Expect = 3e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 419 aggctgcagtgcggtcacgagttccaccttgattgcattggatcggcattcaatgccaaa 478 |||||||| ||||| |||||||||||||| || ||||||||||||||||| ||||| ||| Sbjct: 243 aggctgcaatgcgggcacgagttccacctagactgcattggatcggcatttaatgcaaaa 302 Query: 479 ggagttatgcaatgcccgaactgccgcaaaattgagaaagg 519 || | ||||||||||| || || || || ||||||||||| Sbjct: 303 ggggccatgcaatgccctaattgtcggaagattgagaaagg 343
>dbj|AK104006.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F10, full insert sequence Length = 458 Score = 89.7 bits (45), Expect = 3e-14 Identities = 137/168 (81%), Gaps = 6/168 (3%) Strand = Plus / Plus Query: 1400 atgccagtcgactgtgagacaagctggtggagctcacagcagtctcatggcgcatcagaa 1459 |||||||| ||||||||||||| ||||||||| ||||| || |||||||| ||||||| Sbjct: 2 atgccagtggactgtgagacaaactggtggagttcacaacaatctcatggtacatcaga- 60 Query: 1460 tccacacccgcacctgcgccgaggagactctttggccagtggatcggcctcggcaggtcg 1519 |||||| ||||| || |||||||| ||||| || ||||| || | || || || Sbjct: 61 -----acccgcgcctgctccaaggagactatttgggcaatggattggtgttggaagatca 115 Query: 1520 tcgcccgagaatagatcacccgagggctcatcgtatcgacaaatgcac 1567 || || || ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 116 tctccggaaaatcgatcacccgagggctcatcgtatcggcaaatgcac 163 Score = 48.1 bits (24), Expect = 0.11 Identities = 53/60 (88%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 1750 ttttggtttggtttatgtgaattccgtctcgtacatatttgaaaatcaatttgggatatt 1809 ||||| |||||||||| ||| |||| || |||||||||||| ||||||| |||||||||| Sbjct: 337 ttttgatttggtttat-tgagttccatcacgtacatatttg-aaatcaagttgggatatt 394
>dbj|AK067119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095B01, full insert sequence Length = 1679 Score = 89.7 bits (45), Expect = 3e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 419 aggctgcagtgcggtcacgagttccaccttgattgcattggatcggcattcaatgccaaa 478 |||||||| ||||| |||||||||||||| || ||||||||||||||||| ||||| ||| Sbjct: 243 aggctgcaatgcgggcacgagttccacctagactgcattggatcggcatttaatgcaaaa 302 Query: 479 ggagttatgcaatgcccgaactgccgcaaaattgagaaagg 519 || | ||||||||||| || || || || ||||||||||| Sbjct: 303 ggggccatgcaatgccctaattgtcggaagattgagaaagg 343
>gb|BT017694.1| Zea mays clone EL01N0445B02.c mRNA sequence Length = 1296 Score = 71.9 bits (36), Expect = 8e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaa 508 ||||||||||| || ||||| |||||||||||| | ||||||||||| || || |||| | Sbjct: 12 gattgcattggttcagcatttaatgccaaaggaatcatgcaatgccccaattgtcgcaca 71 Query: 509 attgagaaagggaattggctctatgctaatgg 540 ||||||| ||||| ||||| ||||| ||||| Sbjct: 72 attgagatggggaactggctttatgcgaatgg 103
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 61.9 bits (31), Expect = 8e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 401 gcggagaggtccacggcgaggctgcagtgcggtcacgagttccacct 447 |||| ||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 66581 gcggcgaggtccaccgcgcggctgcagtgcggccacgagttccacct 66627 Score = 52.0 bits (26), Expect = 0.007 Identities = 68/82 (82%) Strand = Plus / Plus Query: 452 tgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaaatt 511 ||||||||||| ||||| ||||| ||||| || ||||| ||||| || || || || ||| Sbjct: 67367 tgcattggatctgcatttaatgcaaaaggggtgatgcagtgcccaaattgtcggaatatt 67426 Query: 512 gagaaagggaattggctctatg 533 |||||||| | |||||||||| Sbjct: 67427 gagaaaggtcactggctctatg 67448
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 61.9 bits (31), Expect = 8e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 401 gcggagaggtccacggcgaggctgcagtgcggtcacgagttccacct 447 |||| ||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 19583506 gcggcgaggtccaccgcgcggctgcagtgcggccacgagttccacct 19583552 Score = 52.0 bits (26), Expect = 0.007 Identities = 68/82 (82%) Strand = Plus / Plus Query: 452 tgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaaatt 511 ||||||||||| ||||| ||||| ||||| || ||||| ||||| || || || || ||| Sbjct: 19584292 tgcattggatctgcatttaatgcaaaaggggtgatgcagtgcccaaattgtcggaatatt 19584351 Query: 512 gagaaagggaattggctctatg 533 |||||||| | |||||||||| Sbjct: 19584352 gagaaaggtcactggctctatg 19584373
>dbj|AK120002.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-H09, full insert sequence Length = 502 Score = 61.9 bits (31), Expect = 8e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 401 gcggagaggtccacggcgaggctgcagtgcggtcacgagttccacct 447 |||| ||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 114 gcggcgaggtccaccgcgcggctgcagtgcggccacgagttccacct 160
>ref|NM_180186.1| Arabidopsis thaliana DNA binding / ubiquitin-protein ligase/ zinc ion binding (AT3G05545) mRNA, complete cds Length = 1668 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 438 agttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaatgcccga 497 ||||||| || ||||| ||||| ||||| |||||||| || ||||| ||||||||||| | Sbjct: 179 agttccatctagattgtattggttcggctttcaatgcaaagggagtgatgcaatgcccca 238 Query: 498 actg 501 |||| Sbjct: 239 actg 242
>gb|AC144541.12| Medicago truncatula clone mth2-28a1, complete sequence Length = 123800 Score = 56.0 bits (28), Expect = 5e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaa 508 ||||||||||| ||||| |||||||| ||||| | ||||||||||| || || || || Sbjct: 40959 gattgcattggctcggccttcaatgcaaaaggcgcaatgcaatgccctaattgtcggaag 40900 Query: 509 attgagaaagggaattggctctatgctaatgg 540 || |||||||| | ||||| ||||||||||| Sbjct: 40899 atcgagaaaggtcagtggctttatgctaatgg 40868
>gb|AY045781.1| Arabidopsis thaliana At3g05545 mRNA sequence Length = 2034 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 438 agttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaatgcccga 497 ||||||| || ||||| ||||| ||||| |||||||| || ||||| ||||||||||| | Sbjct: 408 agttccatctagattgtattggttcggctttcaatgcaaagggagtgatgcaatgcccca 467 Query: 498 actg 501 |||| Sbjct: 468 actg 471
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 56.0 bits (28), Expect = 5e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 452 tgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaaatt 511 ||||||||||||||||| ||||| ||||| | ||||||||||| || || || || ||| Sbjct: 26942744 tgcattggatcggcatttaatgcaaaaggggccatgcaatgccctaattgtcggaagatt 26942803 Query: 512 gagaaagg 519 |||||||| Sbjct: 26942804 gagaaagg 26942811 Score = 42.1 bits (21), Expect = 7.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 419 aggctgcagtgcggtcacgagttccacct 447 |||||||| ||||| |||||||||||||| Sbjct: 26941601 aggctgcaatgcgggcacgagttccacct 26941629
>gb|DQ059111.1| Arabidopsis thaliana RING finger family protein (At3g05545) mRNA, complete cds Length = 1278 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 438 agttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaatgcccga 497 ||||||| || ||||| ||||| ||||| |||||||| || ||||| ||||||||||| | Sbjct: 179 agttccatctagattgtattggttcggctttcaatgcaaagggagtgatgcaatgcccca 238 Query: 498 actg 501 |||| Sbjct: 239 actg 242
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 56.0 bits (28), Expect = 5e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 452 tgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactgccgcaaaatt 511 ||||||||||||||||| ||||| ||||| | ||||||||||| || || || || ||| Sbjct: 44144 tgcattggatcggcatttaatgcaaaaggggccatgcaatgccctaattgtcggaagatt 44203 Query: 512 gagaaagg 519 |||||||| Sbjct: 44204 gagaaagg 44211 Score = 42.1 bits (21), Expect = 7.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 419 aggctgcagtgcggtcacgagttccacct 447 |||||||| ||||| |||||||||||||| Sbjct: 43001 aggctgcaatgcgggcacgagttccacct 43029
>gb|BT001921.1| Arabidopsis thaliana clone C105451 unknown protein (At3g05545) mRNA, complete cds Length = 1309 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 438 agttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaatgcccga 497 ||||||| || ||||| ||||| ||||| |||||||| || ||||| ||||||||||| | Sbjct: 179 agttccatctagattgtattggttcggctttcaatgcaaagggagtgatgcaatgcccca 238 Query: 498 actg 501 |||| Sbjct: 239 actg 242
>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence, complete sequence Length = 100887 Score = 50.1 bits (25), Expect = 0.029 Identities = 46/53 (86%) Strand = Plus / Minus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactg 501 ||||| ||||| ||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 96927 gattgtattggttcggctttcaatgcaaagggagtgatgcaatgccccaactg 96875
>gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC F22F7 genomic sequence, complete sequence Length = 91924 Score = 50.1 bits (25), Expect = 0.029 Identities = 46/53 (86%) Strand = Plus / Minus Query: 449 gattgcattggatcggcattcaatgccaaaggagttatgcaatgcccgaactg 501 ||||| ||||| ||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 10637 gattgtattggttcggctttcaatgcaaagggagtgatgcaatgccccaactg 10585
>ref|NM_001056910.1| Oryza sativa (japonica cultivar-group) Os03g0418600 (Os03g0418600) mRNA, complete cds Length = 2727 Score = 46.1 bits (23), Expect = 0.45 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 aggctgcagtgcggtcacgagttccaccttg 449 ||||||||||||||||| ||| ||||||||| Sbjct: 1293 aggctgcagtgcggtcatgaggtccaccttg 1323
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 ctcgccctcgccgggccggccgt 195 ||||||||||||||||||||||| Sbjct: 2475873 ctcgccctcgccgggccggccgt 2475851
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete sequence Length = 115326 Score = 46.1 bits (23), Expect = 0.45 Identities = 29/31 (93%) Strand = Plus / Minus Query: 419 aggctgcagtgcggtcacgagttccaccttg 449 ||||||||||||||||| ||| ||||||||| Sbjct: 56429 aggctgcagtgcggtcatgaggtccaccttg 56399
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 46.1 bits (23), Expect = 0.45 Identities = 29/31 (93%) Strand = Plus / Minus Query: 419 aggctgcagtgcggtcacgagttccaccttg 449 ||||||||||||||||| ||| ||||||||| Sbjct: 115078 aggctgcagtgcggtcatgaggtccaccttg 115048
>emb|CR936839.12| Mouse DNA sequence from clone CH29-120A16 on chromosome 1, complete sequence Length = 250586 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1638 tgtaagaaaagatggggaaaaaa 1660 ||||||||||||||||||||||| Sbjct: 73178 tgtaagaaaagatggggaaaaaa 73156
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.45 Identities = 29/31 (93%) Strand = Plus / Minus Query: 419 aggctgcagtgcggtcacgagttccaccttg 449 ||||||||||||||||| ||| ||||||||| Sbjct: 17217254 aggctgcagtgcggtcatgaggtccaccttg 17217224
>emb|AL645744.16| Mouse DNA sequence from clone RP23-148E7 on chromosome 1 Contains the Icos gene for inducible T-cell co-stimulator, complete sequence Length = 108015 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1638 tgtaagaaaagatggggaaaaaa 1660 ||||||||||||||||||||||| Sbjct: 81444 tgtaagaaaagatggggaaaaaa 81466
>emb|AL645951.20| Mouse DNA sequence from clone DN-29B18 on chromosome 1 Contains a ribosomal protein L17 (RPL17) pseudogene and a tigger transposable element derived 1 (TIGD1) pseudogene, complete sequence Length = 129519 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1638 tgtaagaaaagatggggaaaaaa 1660 ||||||||||||||||||||||| Sbjct: 34638 tgtaagaaaagatggggaaaaaa 34660
>dbj|AK122114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128A11, full insert sequence Length = 2728 Score = 46.1 bits (23), Expect = 0.45 Identities = 29/31 (93%) Strand = Plus / Plus Query: 419 aggctgcagtgcggtcacgagttccaccttg 449 ||||||||||||||||| ||| ||||||||| Sbjct: 1294 aggctgcagtgcggtcatgaggtccaccttg 1324
>ref|XM_507994.2| PREDICTED: Pan troglodytes F-box and WD-40 domain protein 4 (FBXW4), mRNA Length = 2855 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 ctcgccctcgccgggccggccgttcc 198 ||||||||||||||||| |||||||| Sbjct: 57 ctcgccctcgccgggcccgccgttcc 32
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 420 ggctgcagtgcggtcacgagttccac 445 |||| ||||||||||||||||||||| Sbjct: 6841674 ggcttcagtgcggtcacgagttccac 6841699
>gb|AC123861.4| Mus musculus BAC clone RP23-351E20 from chromosome 2, complete sequence Length = 198454 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 678 aggaaggagaatcatcacctcc 699 |||||||||||||||||||||| Sbjct: 167530 aggaaggagaatcatcacctcc 167509
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Minus Query: 413 acggcgaggctgcagtgcggtcacgagttccacc 446 ||||| ||| ||||||||||||| |||||||||| Sbjct: 27440916 acggcaaggttgcagtgcggtcatgagttccacc 27440883
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Minus Query: 413 acggcgaggctgcagtgcggtcacgagttccacc 446 ||||| ||| ||||||||||||| |||||||||| Sbjct: 4887 acggcaaggttgcagtgcggtcatgagttccacc 4854
>dbj|AP006460.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003M19 Length = 171790 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Minus Query: 413 acggcgaggctgcagtgcggtcacgagttccacc 446 ||||| ||| ||||||||||||| |||||||||| Sbjct: 146577 acggcaaggttgcagtgcggtcatgagttccacc 146544
>gb|AC010789.9|AC010789 Homo sapiens chromosome 10, clone RP11-190J1, complete sequence Length = 203842 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 ctcgccctcgccgggccggccgttcc 198 ||||||||||||||||| |||||||| Sbjct: 23746 ctcgccctcgccgggcccgccgttcc 23771
>gb|AF281859.1|AF281859 Homo sapiens dactylin mRNA, complete cds Length = 2490 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 ctcgccctcgccgggccggccgttcc 198 ||||||||||||||||| |||||||| Sbjct: 211 ctcgccctcgccgggcccgccgttcc 186
>emb|AL929046.9| Mouse DNA sequence from clone RP23-308N4 on chromosome 2, complete sequence Length = 181337 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 678 aggaaggagaatcatcacctcc 699 |||||||||||||||||||||| Sbjct: 122782 aggaaggagaatcatcacctcc 122803
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1250 cgacctgcccctccgccacct 1270 ||||||||||||||||||||| Sbjct: 5559816 cgacctgcccctccgccacct 5559836
>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence Length = 2646969 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 667 atcattctttgaggaaggagaatca 691 ||||||||||||||| ||||||||| Sbjct: 537202 atcattctttgaggacggagaatca 537226
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1112 tctggctctagatctagagct 1132 ||||||||||||||||||||| Sbjct: 3401489 tctggctctagatctagagct 3401469
>ref|NM_180147.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT2G47700) mRNA, complete cds Length = 1502 Score = 42.1 bits (21), Expect = 7.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 431 ggtcacgagttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaa 490 |||||| ||||||| | |||||||||||||| ||||| || ||||||| |||||| Sbjct: 408 ggtcaccagttccatttggattgcattggatcagcatttaacatgaaaggagccatgcaa 467 Query: 491 tgcccgaactgccgcaa 507 ||||| ||||| ||||| Sbjct: 468 tgccctaactgtcgcaa 484
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 42.1 bits (21), Expect = 7.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 396 ccagcgcggagaggtccacggcgaggctgcagt 428 |||||||| ||||||||||||| |||| ||||| Sbjct: 27106 ccagcgcgtagaggtccacggccaggccgcagt 27138
>gb|AC155825.2| Mus musculus BAC clone RP23-54D15 from chromosome 16, complete sequence Length = 192183 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1799 tttgggatattttgaagcttc 1819 ||||||||||||||||||||| Sbjct: 99981 tttgggatattttgaagcttc 100001
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1489 ctttggccagtggatcggcctcggc 1513 |||||||||| |||||||||||||| Sbjct: 1024159 ctttggccaggggatcggcctcggc 1024135
>gb|AC122298.3| Mus musculus BAC clone RP23-269A11 from 12, complete sequence Length = 151332 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1641 aagaaaagatggggaaaaaac 1661 ||||||||||||||||||||| Sbjct: 28214 aagaaaagatggggaaaaaac 28194
>gb|AC100736.5| Mus musculus chromosome 15, clone RP24-336O6, complete sequence Length = 247275 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 ttttctttctttctaatttct 26 ||||||||||||||||||||| Sbjct: 115490 ttttctttctttctaatttct 115470
>gb|BT008845.1| Arabidopsis thaliana At2g47700 mRNA, complete cds Length = 1077 Score = 42.1 bits (21), Expect = 7.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 431 ggtcacgagttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaa 490 |||||| ||||||| | |||||||||||||| ||||| || ||||||| |||||| Sbjct: 175 ggtcaccagttccatttggattgcattggatcagcatttaacatgaaaggagccatgcaa 234 Query: 491 tgcccgaactgccgcaa 507 ||||| ||||| ||||| Sbjct: 235 tgccctaactgtcgcaa 251
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 tcgccgggccggccgttccga 200 ||||||||||||||||||||| Sbjct: 4912944 tcgccgggccggccgttccga 4912924
>dbj|AK140484.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930009I03 product:unclassifiable, full insert sequence Length = 4188 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ttttctttctttctaatttct 26 ||||||||||||||||||||| Sbjct: 1577 ttttctttctttctaatttct 1597
>gb|DQ086859.1| Arabidopsis thaliana At2g47700 mRNA, complete cds Length = 1077 Score = 42.1 bits (21), Expect = 7.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 431 ggtcacgagttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaa 490 |||||| ||||||| | |||||||||||||| ||||| || ||||||| |||||| Sbjct: 175 ggtcaccagttccatttggattgcattggatcagcatttaacatgaaaggagccatgcaa 234 Query: 491 tgcccgaactgccgcaa 507 ||||| ||||| ||||| Sbjct: 235 tgccctaactgtcgcaa 251
>emb|CT009478.9| M.truncatula DNA sequence from clone MTH2-106O21 on chromosome 3, complete sequence Length = 121373 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 ttttctttctttctaatttct 26 ||||||||||||||||||||| Sbjct: 26767 ttttctttctttctaatttct 26747
>dbj|AK048892.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230079E05 product:unclassifiable, full insert sequence Length = 2435 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ttttctttctttctaatttct 26 ||||||||||||||||||||| Sbjct: 73 ttttctttctttctaatttct 93
>emb|CR954193.3| Medicago truncatula chromosome 5 clone mth2-27a1, COMPLETE SEQUENCE Length = 127717 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 ttttctttctttctaatttct 26 ||||||||||||||||||||| Sbjct: 28701 ttttctttctttctaatttct 28681
>dbj|AK082139.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230012P10 product:unclassifiable, full insert sequence Length = 1856 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ttttctttctttctaatttct 26 ||||||||||||||||||||| Sbjct: 1389 ttttctttctttctaatttct 1409
>gb|AC008259.4|AC008259 Drosophila melanogaster, chromosome 2R, region 43D-43D, BAC clone BACR04H12, complete sequence Length = 175285 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1112 tctggctctagatctagagct 1132 ||||||||||||||||||||| Sbjct: 7171 tctggctctagatctagagct 7151
>gb|AC008258.4|AC008258 Drosophila melanogaster, chromosome 2R, region 43C-43C, BAC clone BACR04G20, complete sequence Length = 184079 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1112 tctggctctagatctagagct 1132 ||||||||||||||||||||| Sbjct: 107678 tctggctctagatctagagct 107658
>gb|BT002412.1| Arabidopsis thaliana unknown protein (At2g47700) mRNA, complete cds Length = 1451 Score = 42.1 bits (21), Expect = 7.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 431 ggtcacgagttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaa 490 |||||| ||||||| | |||||||||||||| ||||| || ||||||| |||||| Sbjct: 374 ggtcaccagttccatttggattgcattggatcagcatttaacatgaaaggagccatgcaa 433 Query: 491 tgcccgaactgccgcaa 507 ||||| ||||| ||||| Sbjct: 434 tgccctaactgtcgcaa 450
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 42.1 bits (21), Expect = 7.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 396 ccagcgcggagaggtccacggcgaggctgcagt 428 |||||||| ||||||||||||| |||| ||||| Sbjct: 28243 ccagcgcgtagaggtccacggccaggccgcagt 28275
>emb|BX820865.1|CNS0AAD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH76ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 993 Score = 42.1 bits (21), Expect = 7.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 431 ggtcacgagttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaa 490 |||||| ||||||| | |||||||||||||| ||||| || ||||||| |||||| Sbjct: 298 ggtcaccagttccatttggattgcattggatcagcatttaacatgaaaggagccatgcaa 357 Query: 491 tgcccgaactgccgcaa 507 ||||| ||||| ||||| Sbjct: 358 tgccctaactgtcgcaa 374
>emb|BX820542.1|CNS0AACU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1416 Score = 42.1 bits (21), Expect = 7.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 431 ggtcacgagttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaa 490 |||||| ||||||| | |||||||||||||| ||||| || ||||||| |||||| Sbjct: 358 ggtcaccagttccatttggattgcattggatcagcatttaacatgaaaggagccatgcaa 417 Query: 491 tgcccgaactgccgcaa 507 ||||| ||||| ||||| Sbjct: 418 tgccctaactgtcgcaa 434
>emb|BX820072.1|CNS0AAC1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1474 Score = 42.1 bits (21), Expect = 7.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 431 ggtcacgagttccaccttgattgcattggatcggcattcaatgccaaaggagttatgcaa 490 |||||| ||||||| | |||||||||||||| ||||| || ||||||| |||||| Sbjct: 407 ggtcaccagttccatttggattgcattggatcagcatttaacatgaaaggagccatgcaa 466 Query: 491 tgcccgaactgccgcaa 507 ||||| ||||| ||||| Sbjct: 467 tgccctaactgtcgcaa 483
>gb|AC005768.17|AC005768 Homo sapiens chromosome 4 clone C0315N08, complete sequence Length = 190544 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1641 aagaaaagatggggaaaaaac 1661 ||||||||||||||||||||| Sbjct: 157093 aagaaaagatggggaaaaaac 157073
>gb|AC004280.1|AC004280 Drosophila melanogaster DNA sequence (P1 DS01142 (D148)), complete sequence Length = 78174 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1112 tctggctctagatctagagct 1132 ||||||||||||||||||||| Sbjct: 72008 tctggctctagatctagagct 71988 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 272,027,864 Number of extensions: 15669522 Number of successful extensions: 408391 Number of sequences better than 10.0: 79 Number of HSP's gapped: 408376 Number of HSP's successfully gapped: 144 Length of query: 1841 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1818 Effective length of database: 18,503,978,556 Effective search space: 33640233014808 Effective search space used: 33640233014808 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
