ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf73m15 |
|---|---|
| Clone Library Name | barley_pub |
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 194 bits (492), Expect = 1e-48 Identities = 107/265 (40%), Positives = 150/265 (56%), Gaps = 1/265 (0%) Frame = +3 Query: 186 PGSTGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRAR 365 PG++G + + D GK+FIGG+SW T+ D LR+YF K+GE+ E ++MRD T R+R Sbjct: 7 PGTSG----SANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSR 62 Query: 366 GFGFIVFADPAVAERVIMEKHM-IDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK 542 GFGF+ FADPA ++V+ + H +D + ++ K A PR Q + RTK Sbjct: 63 GFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVT------------RTK 110 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 KIFVGGL++ D + YFEQFG + D ++M+D T R RGFGF+T+++ED V+K Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI 170 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 FHE+N KMVE K+A PKE+ P R A G+ Y M ++F+ G P+ V YG Sbjct: 171 HFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM---DAFMLGMGMLGYPNFVATYG 227 Query: 903 MRMDARFGLLSGGRSSYPSFGGGYG 977 YP F YG Sbjct: 228 --------------RGYPGFAPSYG 238
>Q96DH6:MSI2H_HUMAN RNA-binding protein Musashi homolog 2 - Homo sapiens (Human)| Length = 328 Score = 193 bits (490), Expect = 2e-48 Identities = 104/253 (41%), Positives = 145/253 (57%), Gaps = 1/253 (0%) Frame = +3 Query: 222 EMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 + + D GK+FIGG+SW T+ D LR+YF K+GE+ E ++MRD T R+RGFGF+ FADPA Sbjct: 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPAS 74 Query: 402 AERVIMEKHM-IDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVT 578 ++V+ + H +D + ++ K A PR Q + RTKKIFVGGL++ Sbjct: 75 VDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSANTV 122 Query: 579 EADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEV 758 D + YFEQFG + D ++M+D T R RGFGF+T+++ED V+K FHE+N KMVE Sbjct: 123 VEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC 182 Query: 759 KRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSG 938 K+A PKE+ P R A G+ Y M ++F+ G P+ V YG Sbjct: 183 KKAQPKEVMFPPGTRGRARGLPYTM---DAFMLGMGMLGYPNFVATYG------------ 227 Query: 939 GRSSYPSFGGGYG 977 YP F YG Sbjct: 228 --RGYPGFAPSYG 238 Score = 77.4 bits (189), Expect = 2e-13 Identities = 36/88 (40%), Positives = 61/88 (69%), Gaps = 1/88 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P+M K+F+GG+S +T + +++YFE++G+V +A++M D+ T R RGFGF+ F + Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161 Query: 396 AVAERVI-MEKHMIDGRMVEAKKAVPRD 476 V E+V + H I+ +MVE KKA P++ Sbjct: 162 DVVEKVCEIHFHEINNKMVECKKAQPKE 189
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 184 bits (467), Expect = 1e-45 Identities = 92/233 (39%), Positives = 137/233 (58%), Gaps = 2/233 (0%) Frame = +3 Query: 222 EMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 ++ ++ K+FIGG++WDT ED LREYF KYG V + IM+D ATGR+RGFGF+ F P+ Sbjct: 153 DLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSS 212 Query: 402 AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 + V+ +H++DG++++ K+A+PRD+Q +T KIFVGG+ V Sbjct: 213 VDEVVKTQHILDGKVIDPKRAIPRDEQD----------------KTGKIFVGGIGPDVRP 256 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 +F +F Q+GTI D +M D +T + RGFGF+TYDS DAVD+ F + + +E+K Sbjct: 257 KEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIK 316 Query: 762 RAVPKELSPGPSMRSPAGGINYVMNRANSFLN--GYTQGYSPSPVGGYGMRMD 914 RA P+ + S G N + R +F N + Q Y +GGY M+ Sbjct: 317 RAEPRHMQQKSSNNGGNNGGNNMNRRGGNFGNQGDFNQMYQNPMMGGYNPMMN 369
>Q6URK4:ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 - Rattus norvegicus (Rat)| Length = 379 Score = 182 bits (463), Expect = 3e-45 Identities = 114/322 (35%), Positives = 160/322 (49%), Gaps = 10/322 (3%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P+ KLFIGG+S++T +D LRE+FEK+G + + V+MRD T R+RGFGF+ ++ Sbjct: 27 DPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCV 86 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 + + + H +DGR+VE K+AV R+D KKIFVGG+ Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDS----------VKPGAHLTVKKIFVGGIKED 136 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMV 752 E + R YFE++G I + VM D + + RGF F+T+D D VDK + + +H +NG Sbjct: 137 TEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNC 196 Query: 753 EVKRAVPK-ELSPGPSMRSPAGGINYVMNRANSFLNG---YTQGYSPSPVGGYGMRMDAR 920 EVK+A+ K E+ S R GG M R +F G + +G + GGYG Sbjct: 197 EVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGS 256 Query: 921 FGLLSGGRSSYPSF---GGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSG 1091 G GG Y F GG YG G + G GG YG Q Y G G Sbjct: 257 RGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPG-------YGNQGGGYGGGGGG 309 Query: 1092 --RYNSNISYGGVNDNSGSVFN 1151 YN ++GG N G +N Sbjct: 310 YDGYNEGGNFGGGNYGGGGNYN 331
>Q8BG05:ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 - Mus musculus (Mouse)| Length = 379 Score = 182 bits (463), Expect = 3e-45 Identities = 114/322 (35%), Positives = 160/322 (49%), Gaps = 10/322 (3%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P+ KLFIGG+S++T +D LRE+FEK+G + + V+MRD T R+RGFGF+ ++ Sbjct: 27 DPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCV 86 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 + + + H +DGR+VE K+AV R+D KKIFVGG+ Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDS----------VKPGAHLTVKKIFVGGIKED 136 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMV 752 E + R YFE++G I + VM D + + RGF F+T+D D VDK + + +H +NG Sbjct: 137 TEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNC 196 Query: 753 EVKRAVPK-ELSPGPSMRSPAGGINYVMNRANSFLNG---YTQGYSPSPVGGYGMRMDAR 920 EVK+A+ K E+ S R GG M R +F G + +G + GGYG Sbjct: 197 EVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGS 256 Query: 921 FGLLSGGRSSYPSF---GGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSG 1091 G GG Y F GG YG G + G GG YG Q Y G G Sbjct: 257 RGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPG-------YGNQGGGYGGGGGG 309 Query: 1092 --RYNSNISYGGVNDNSGSVFN 1151 YN ++GG N G +N Sbjct: 310 YDGYNEGGNFGGGNYGGGGNYN 331
>P51991:ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 - Homo sapiens (Human)| Length = 378 Score = 181 bits (459), Expect = 9e-45 Identities = 112/320 (35%), Positives = 158/320 (49%), Gaps = 8/320 (2%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P+ KLFIGG+S++T +D LRE+FEK+G + + V+MRD T R+RGFGF+ ++ Sbjct: 27 DPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCV 86 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 + + + H +DGR+VE K+AV R+D KKIFVGG+ Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDS----------VKPGAHLTVKKIFVGGIKED 136 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMV 752 E + R YFE++G I + VM D + + RGF F+T+D D VDK + + +H +NG Sbjct: 137 TEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNC 196 Query: 753 EVKRAVPK-ELSPGPSMRSPAGGINYVMNRANSFLNG---YTQGYSPSPVGGYGMRMDAR 920 EVK+A+ K E+ S R GG M R +F G + +G + GGYG Sbjct: 197 EVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGS 256 Query: 921 FGLLSGGRSSYPSF---GGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSG 1091 G GG Y F GG YG G + G GG N YG G Sbjct: 257 RGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGG------GGGYD 310 Query: 1092 RYNSNISYGGVNDNSGSVFN 1151 YN ++GG N G +N Sbjct: 311 GYNEGGNFGGGNYGGGGNYN 330
>O43347:MSI1H_HUMAN RNA-binding protein Musashi homolog 1 - Homo sapiens (Human)| Length = 362 Score = 179 bits (454), Expect = 4e-44 Identities = 104/251 (41%), Positives = 145/251 (57%), Gaps = 3/251 (1%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P+ D K+FIGG+SW T ++ LREYF ++GEV E ++MRD T R+RGFGF+ F D A Sbjct: 13 PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQA 72 Query: 399 VAERVIME-KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 ++V+ + +H +D + ++ K A PR Q + RTKKIFVGGL+ Sbjct: 73 GVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSVNT 120 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 T D + YFEQFG + D ++M+D T R RGFGF+T++SED V+K FHE+N KMVE Sbjct: 121 TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180 Query: 756 VKRAVPKE-LSPGPSMRSPAGGINYVMNRANSFLNGYTQ-GYSPSPVGGYGMRMDARFGL 929 K+A PKE +SP S R + + Y M ++F+ G GY Y R + GL Sbjct: 181 CKKAQPKEVMSPTGSARGRSRVMPYGM---DAFMLGIGMLGYPGFQATTYASR--SYTGL 235 Query: 930 LSGGRSSYPSF 962 G +P F Sbjct: 236 APGYTYQFPEF 246 Score = 77.4 bits (189), Expect = 2e-13 Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P+M K+F+GG+S +T + +++YFE++G+V +A++M D+ T R RGFGF+ F Sbjct: 101 QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESE 160 Query: 396 AVAERVI-MEKHMIDGRMVEAKKAVPRD 476 + E+V + H I+ +MVE KKA P++ Sbjct: 161 DIVEKVCEIHFHEINNKMVECKKAQPKE 188
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 179 bits (454), Expect = 4e-44 Identities = 101/246 (41%), Positives = 140/246 (56%), Gaps = 23/246 (9%) Frame = +3 Query: 234 DAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERV 413 + GKLF+GG+ W T ++ LR YF +YGEVV+ VIM+D+ T ++RGFGF+ F DP V Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67 Query: 414 IMEK-HMIDGRMVEAKKAVPRD---DQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 + + H +DGR ++ K PR ++ R+ KIFVGG+ E Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGE 127 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 + + YF +FG +T+VV++YD QRPRGFGFIT++ E +VD+A+ FH++ GK VEVK Sbjct: 128 TELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 187 Query: 762 RAVP---KELSPGPSMRSPAGGINYVMNRA-NSFLNGYT-------QGYSP--------S 884 RA P K +PGP G N +RA S NG+T QGYSP Sbjct: 188 RAEPRDSKSQTPGPP------GSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQ 241 Query: 885 PVGGYG 902 +GGYG Sbjct: 242 TIGGYG 247 Score = 77.4 bits (189), Expect = 2e-13 Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 2/116 (1%) Frame = +3 Query: 141 PCLPQDPRQPARDPFPGSTGWK*EPEPEME-ADAGKLFIGGISWDTNEDRLREYFEKYGE 317 PC P+ + P GW+ + EP E + + K+F+GGI + E L+EYF ++G Sbjct: 84 PCTPRGMQPERSRP---REGWQ-QKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGV 139 Query: 318 VVEAVIMRDRATGRARGFGFIVFAD-PAVAERVIMEKHMIDGRMVEAKKAVPRDDQ 482 V E V++ D R RGFGFI F D +V + V M H I G+ VE K+A PRD + Sbjct: 140 VTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 195
>Q8K3P4:MSI1H_RAT RNA-binding protein Musashi homolog 1 - Rattus norvegicus (Rat)| Length = 362 Score = 179 bits (453), Expect = 5e-44 Identities = 104/251 (41%), Positives = 145/251 (57%), Gaps = 3/251 (1%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P+ D K+FIGG+SW T ++ LREYF ++GEV E ++MRD T R+RGFGF+ F D A Sbjct: 13 PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQA 72 Query: 399 VAERVIME-KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 ++V+ + +H +D + ++ K A PR Q + RTKKIFVGGL+ Sbjct: 73 GVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSVNT 120 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 T D + YFEQFG + D ++M+D T R RGFGF+T++SED V+K FHE+N KMVE Sbjct: 121 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180 Query: 756 VKRAVPKE-LSPGPSMRSPAGGINYVMNRANSFLNGYTQ-GYSPSPVGGYGMRMDARFGL 929 K+A PKE +SP S R + + Y M ++F+ G GY Y R + GL Sbjct: 181 CKKAQPKEVMSPTGSARGRSRVMPYGM---DAFMLGIGMLGYPGFQATTYASR--SYTGL 235 Query: 930 LSGGRSSYPSF 962 G +P F Sbjct: 236 APGYTYQFPEF 246 Score = 76.6 bits (187), Expect = 3e-13 Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P+M K+F+GG+S +T + ++ YFE++G+V +A++M D+ T R RGFGF+ F Sbjct: 101 QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESE 160 Query: 396 AVAERVI-MEKHMIDGRMVEAKKAVPRD 476 + E+V + H I+ +MVE KKA P++ Sbjct: 161 DIVEKVCEIHFHEINNKMVECKKAQPKE 188
>Q61474:MSI1H_MOUSE RNA-binding protein Musashi homolog 1 - Mus musculus (Mouse)| Length = 362 Score = 179 bits (453), Expect = 5e-44 Identities = 104/251 (41%), Positives = 145/251 (57%), Gaps = 3/251 (1%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P+ D K+FIGG+SW T ++ LREYF ++GEV E ++MRD T R+RGFGF+ F D A Sbjct: 13 PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQA 72 Query: 399 VAERVIME-KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 ++V+ + +H +D + ++ K A PR Q + RTKKIFVGGL+ Sbjct: 73 GVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSVNT 120 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 T D + YFEQFG + D ++M+D T R RGFGF+T++SED V+K FHE+N KMVE Sbjct: 121 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180 Query: 756 VKRAVPKE-LSPGPSMRSPAGGINYVMNRANSFLNGYTQ-GYSPSPVGGYGMRMDARFGL 929 K+A PKE +SP S R + + Y M ++F+ G GY Y R + GL Sbjct: 181 CKKAQPKEVMSPTGSARGRSRVMPYGM---DAFMLGIGMLGYPGFQATTYASR--SYTGL 235 Query: 930 LSGGRSSYPSF 962 G +P F Sbjct: 236 APGYTYQFPEF 246 Score = 76.6 bits (187), Expect = 3e-13 Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P+M K+F+GG+S +T + ++ YFE++G+V +A++M D+ T R RGFGF+ F Sbjct: 101 QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESE 160 Query: 396 AVAERVI-MEKHMIDGRMVEAKKAVPRD 476 + E+V + H I+ +MVE KKA P++ Sbjct: 161 DIVEKVCEIHFHEINNKMVECKKAQPKE 188
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 177 bits (450), Expect = 1e-43 Identities = 99/241 (41%), Positives = 136/241 (56%), Gaps = 18/241 (7%) Frame = +3 Query: 234 DAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERV 413 + GKLF+GG+ W T ++ LR YF +YGEVV+ VIM+D+ T ++RGFGF+ F DP V Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67 Query: 414 IMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEA 584 + + H +DGR ++ K PR Q +K KIFVGG+ E Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGET 127 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 + R YF++FG +T+VV++YD QRPRGFGFIT++ E +VD+A+ FH++ GK VEVKR Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187 Query: 765 AVP---KELSPGPSMRSPAGGINYVMNRANSFLN----GYTQGYSP--------SPVGGY 899 A P K +PG S G V N AN + + QGY P +GGY Sbjct: 188 AEPRDSKSQAPGQPGASQWGS-RVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGY 246 Query: 900 G 902 G Sbjct: 247 G 247
>P51968:RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 - Xenopus laevis| (African clawed frog) Length = 373 Score = 176 bits (446), Expect = 3e-43 Identities = 119/334 (35%), Positives = 168/334 (50%), Gaps = 9/334 (2%) Frame = +3 Query: 159 PRQPARDPFPGSTGWK*EP-EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVI 335 PR D +P S +P EPE KLFIGG+S++T +D LRE+FE++G++ + V+ Sbjct: 2 PRGGMDDHWPSSDDQGHDPKEPEQ---LRKLFIGGLSFETTDDSLREHFEQWGKLTDCVV 58 Query: 336 MRDRATGRARGFGFIVFADPAVAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXX 512 MRD T R+RGFGF+ ++ + + + H +DGR+VE K+AV R+D Sbjct: 59 MRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVDGRVVEPKRAVSREDSAR-------- 110 Query: 513 XXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 KKIFVGG+ E R Y E +G I + VM D + + RGF F+T+D Sbjct: 111 --PGAHLTVKKIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDD 168 Query: 693 EDAVDKALFKTFHELNGKMVEVKRAVPK-ELSPGPSMRSPAGGINYVMNRANSFLNGYTQ 869 D VDK + + +H +NG EVK+A+ K E+ + R GG + M R ++ G Sbjct: 169 HDTVDKIVVQKYHTINGHNCEVKKALSKQEMQTASAQRGRGGGGSNFMGRGGNYGGGDGG 228 Query: 870 GYSPSPVGGYGMRMDARFGLLSGGRSSYPSFGGGY----GIGMNFDPGMNPGIGGSSNFN 1037 + GG+G R G GG Y G GY G G N+ G PG GG + Sbjct: 229 NFGRGGGGGFGNRGGYGGGGGRGG-GGYGGGGDGYNGFGGDGGNY--GGGPGYGG-RGYG 284 Query: 1038 NSVQYGRQINPYYSGNSG--RYNSNISYGGVNDN 1133 S YG Q Y G G YN + ++GG N N Sbjct: 285 GSPGYGNQGGGYGGGGGGYDGYNESGNFGGGNYN 318
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 174 bits (442), Expect = 9e-43 Identities = 96/242 (39%), Positives = 137/242 (56%), Gaps = 19/242 (7%) Frame = +3 Query: 234 DAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERV 413 + GKLF+GG+ W T ++ LR YF +YGEVV+ VIM+D+ T ++RGFGF+ F DP V Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67 Query: 414 IMEK-HMIDGRMVEAKKAVPRDDQ--QALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEA 584 + + H +DGR ++ K PR Q + ++ KIFVGG+ E Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGET 127 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 + R YF++FG +T+VV++YD QRPRGFGFIT++ E +VD+A+ FH++ GK VEVKR Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187 Query: 765 AVPKELSPGPSMRSPAGGINYVMNRANSFLNGYT--------QGYSP--------SPVGG 896 A P++ S + P G + A S NG+ QGY P +GG Sbjct: 188 AEPRD-SKNQAPGQP-GASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGG 245 Query: 897 YG 902 YG Sbjct: 246 YG 247
>O88569:ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 - Mus musculus (Mouse)| Length = 353 Score = 174 bits (441), Expect = 1e-42 Identities = 113/335 (33%), Positives = 160/335 (47%), Gaps = 36/335 (10%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG+S++T E+ LR Y+E++G++ + V+MRD A+ R+RGFGF+ F+ A + + Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H IDGR+VE K+AV R++ KK+FVGG+ E R Y Sbjct: 82 RPHSIDGRVVEPKRAVAREES----------GKPGAHVTVKKLFVGGIKEDTEEHHLRDY 131 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 FE++G I + ++ D + + RGFGF+T+D D VDK + + +H +NG EV++A+ ++ Sbjct: 132 FEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQ 191 Query: 780 ---------------------------LSPGPSMRSPAGGINYVMNRANSFLNGYTQGYS 878 PGP G Y R F +GY GY Sbjct: 192 EMQEVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGR--GFGDGY-NGYG 248 Query: 879 PSPVG-------GYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFN 1037 P G GYG G GG Y + GGGYG G + G N G G ++F Sbjct: 249 GGPGGGNFGGSPGYG----GGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGSYNDFG 304 Query: 1038 NSVQYGRQINPYYSGN-SGRYNSNISYGGVNDNSG 1139 N Q P SGN G N YGG N G Sbjct: 305 NYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPG 339 Score = 83.2 bits (204), Expect = 3e-15 Identities = 40/85 (47%), Positives = 57/85 (67%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL+ TE R Y+EQ+G +TD VVM D ++R RGFGF+T+ S VD A+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80 Query: 720 KTFHELNGKMVEVKRAVPKELSPGP 794 H ++G++VE KRAV +E S P Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKP 105 Score = 80.5 bits (197), Expect = 2e-14 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P KLF+GGI DT E LR+YFE+YG++ I+ DR +G+ RGFGF+ F D Sbjct: 104 KPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDH 163 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQ 485 ++++++K H I+G E +KA+ R + Q Sbjct: 164 DPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194
>P22626:ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 - Homo sapiens (Human)| Length = 353 Score = 174 bits (441), Expect = 1e-42 Identities = 113/335 (33%), Positives = 160/335 (47%), Gaps = 36/335 (10%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG+S++T E+ LR Y+E++G++ + V+MRD A+ R+RGFGF+ F+ A + + Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H IDGR+VE K+AV R++ KK+FVGG+ E R Y Sbjct: 82 RPHSIDGRVVEPKRAVAREES----------GKPGAHVTVKKLFVGGIKEDTEEHHLRDY 131 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 FE++G I + ++ D + + RGFGF+T+D D VDK + + +H +NG EV++A+ ++ Sbjct: 132 FEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQ 191 Query: 780 ---------------------------LSPGPSMRSPAGGINYVMNRANSFLNGYTQGYS 878 PGP G Y R F +GY GY Sbjct: 192 EMQEVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGR--GFGDGY-NGYG 248 Query: 879 PSPVG-------GYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFN 1037 P G GYG G GG Y + GGGYG G + G N G G ++F Sbjct: 249 GGPGGGNFGGSPGYG----GGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFG 304 Query: 1038 NSVQYGRQINPYYSGN-SGRYNSNISYGGVNDNSG 1139 N Q P SGN G N YGG N G Sbjct: 305 NYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPG 339 Score = 83.2 bits (204), Expect = 3e-15 Identities = 40/85 (47%), Positives = 57/85 (67%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL+ TE R Y+EQ+G +TD VVM D ++R RGFGF+T+ S VD A+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80 Query: 720 KTFHELNGKMVEVKRAVPKELSPGP 794 H ++G++VE KRAV +E S P Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKP 105 Score = 80.5 bits (197), Expect = 2e-14 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P KLF+GGI DT E LR+YFE+YG++ I+ DR +G+ RGFGF+ F D Sbjct: 104 KPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDH 163 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQ 485 ++++++K H I+G E +KA+ R + Q Sbjct: 164 DPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194
>Q2HJ60:ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 - Bos taurus (Bovine)| Length = 341 Score = 174 bits (441), Expect = 1e-42 Identities = 113/335 (33%), Positives = 160/335 (47%), Gaps = 36/335 (10%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG+S++T E+ LR Y+E++G++ + V+MRD A+ R+RGFGF+ F+ A + + Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H IDGR+VE K+AV R++ KK+FVGG+ E R Y Sbjct: 70 RPHSIDGRVVEPKRAVAREES----------GKPGAHVTVKKLFVGGIKEDTEEHHLRDY 119 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 FE++G I + ++ D + + RGFGF+T+D D VDK + + +H +NG EV++A+ ++ Sbjct: 120 FEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQ 179 Query: 780 ---------------------------LSPGPSMRSPAGGINYVMNRANSFLNGYTQGYS 878 PGP G Y R F +GY GY Sbjct: 180 EMQEVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGR--GFGDGY-NGYG 236 Query: 879 PSPVG-------GYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFN 1037 P G GYG G GG Y + GGGYG G + G N G G ++F Sbjct: 237 GGPGGGNFGGSPGYG----GGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFG 292 Query: 1038 NSVQYGRQINPYYSGN-SGRYNSNISYGGVNDNSG 1139 N Q P SGN G N YGG N G Sbjct: 293 NYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPG 327 Score = 83.2 bits (204), Expect = 3e-15 Identities = 40/85 (47%), Positives = 57/85 (67%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL+ TE R Y+EQ+G +TD VVM D ++R RGFGF+T+ S VD A+ Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68 Query: 720 KTFHELNGKMVEVKRAVPKELSPGP 794 H ++G++VE KRAV +E S P Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKP 93 Score = 80.5 bits (197), Expect = 2e-14 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P KLF+GGI DT E LR+YFE+YG++ I+ DR +G+ RGFGF+ F D Sbjct: 92 KPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDH 151 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQ 485 ++++++K H I+G E +KA+ R + Q Sbjct: 152 DPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 182
>Q5RBU8:ROA2_PONPY Heterogeneous nuclear ribonucleoproteins A2/B1 - Pongo pygmaeus| (Orangutan) Length = 353 Score = 172 bits (437), Expect = 3e-42 Identities = 113/335 (33%), Positives = 159/335 (47%), Gaps = 36/335 (10%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG+S++T E+ LR Y+E++G++ + V+MRD A+ R+RGFGF+ F+ A + + Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H IDGR+VE K+AV R++ KK+FVGG+ E R Y Sbjct: 82 RPHSIDGRVVEPKRAVAREES----------GKPGAHVTVKKLFVGGIKEDTEEHHLRDY 131 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 FE++G I + ++ D + + RGFGF+T+D D VDK + + H +NG EV++A+ ++ Sbjct: 132 FEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKALSRQ 191 Query: 780 ---------------------------LSPGPSMRSPAGGINYVMNRANSFLNGYTQGYS 878 PGP G Y R F +GY GY Sbjct: 192 EMQEVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGR--GFGDGY-NGYG 248 Query: 879 PSPVG-------GYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFN 1037 P G GYG G GG Y + GGGYG G + G N G G ++F Sbjct: 249 GGPGGGNFGGSPGYG----GGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFG 304 Query: 1038 NSVQYGRQINPYYSGN-SGRYNSNISYGGVNDNSG 1139 N Q P SGN G N YGG N G Sbjct: 305 NYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPG 339 Score = 83.2 bits (204), Expect = 3e-15 Identities = 40/85 (47%), Positives = 57/85 (67%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL+ TE R Y+EQ+G +TD VVM D ++R RGFGF+T+ S VD A+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80 Query: 720 KTFHELNGKMVEVKRAVPKELSPGP 794 H ++G++VE KRAV +E S P Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKP 105 Score = 80.5 bits (197), Expect = 2e-14 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P KLF+GGI DT E LR+YFE+YG++ I+ DR +G+ RGFGF+ F D Sbjct: 104 KPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDH 163 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQ 485 ++++++K H I+G E +KA+ R + Q Sbjct: 164 DPVDKIVLQKHHTINGHNAEVRKALSRQEMQ 194
>P51992:RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 - Xenopus laevis| (African clawed frog) Length = 385 Score = 172 bits (436), Expect = 4e-42 Identities = 120/344 (34%), Positives = 167/344 (48%), Gaps = 19/344 (5%) Frame = +3 Query: 159 PRQPARDPFPGSTGWK*EP-EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVI 335 PR D +P S EP EPE KLFIGG+S++T +D LRE+FE++G++ + V+ Sbjct: 2 PRGGMDDHWPSSDDQGHEPKEPEQ---LRKLFIGGLSFETTDDSLREHFEQWGKLTDCVV 58 Query: 336 MRDRATGRARGFGFIVFADPAVAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXX 512 MRD T R+RGFGF+ ++ + + + H +DGR+VE K+AV R+D Sbjct: 59 MRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVDGRVVEPKRAVSREDSAR-------- 110 Query: 513 XXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 KKIFVGG+ E R YFE +G I + VM D + + RGF F+T+D Sbjct: 111 --PGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDD 168 Query: 693 EDAVDKALFKTFHELNGKMVEVKRAVPK-ELSPGPSMRSPAGGINYVMNRANSFLNG--- 860 D VDK + + +H +N EVK+A+ K E+ + R GG + M R ++ G Sbjct: 169 HDTVDKIVVQKYHTINLHNCEVKKALSKQEMQTASAQRGRGGGGSNFMGRGGNYGGGDGG 228 Query: 861 ----YTQGYSPSPVGGYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSS 1028 + +G GGYG R G GG Y FGG G + G PG GG Sbjct: 229 GGGNFGRGGGFGNRGGYG-GGGGRGGGYGGGGDGYNGFGGDGG-----NYGGGPGYGG-R 281 Query: 1029 NFNNSVQYGRQINPYYSGNSG---------RYNSNISYGGVNDN 1133 + S YG Q Y G G YN ++GG N N Sbjct: 282 GYGGSPGYGNQGGGYGGGGGGGGAGGGGYDGYNEGGNFGGGNYN 325 Score = 33.9 bits (76), Expect = 2.4 Identities = 25/75 (33%), Positives = 27/75 (36%) Frame = +3 Query: 1380 GAYGRNTGSGGVNASLNQSSNGYGRNFGDSSAAGGGSIYGDTTWRSGSELDGTSPFGYGL 1559 G YG G GG NG+G GD GGG YG + GS G GYG Sbjct: 243 GGYGGGGGRGGGYGGGGDGYNGFG---GDGGNYGGGPGYGGRGY-GGSPGYGNQGGGYGG 298 Query: 1560 GNAASDVTAKSSAGY 1604 G GY Sbjct: 299 GGGGGGAGGGGYDGY 313
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 172 bits (435), Expect = 6e-42 Identities = 114/319 (35%), Positives = 166/319 (52%), Gaps = 8/319 (2%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P+ KLFIGG+S++T ++ LR +FE++G + + V+MRD T R+RGFGF+ +A Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66 Query: 399 VAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 + + + H +DGR+VE K+AV R+D Q KKIFVGG+ Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQR----------PGAHLTVKKIFVGGIKEDT 116 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 E R YFEQ+G I + +M D + + RGF F+T+D D+VDK + + +H +NG E Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176 Query: 756 VKRAVPKE--LSPGPSMRSPAGGINYVMNRANSF--LNGYTQGYSPSPVGGYGMRMDARF 923 V++A+ K+ S S R +G N+ R F + + +G + S GG+G Sbjct: 177 VRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGG-- 234 Query: 924 GLLSGGRSSYPSFG--GGYGIGMNFDPGMNPGIGGSSNFNNSVQ-YGRQINPYYSGNSGR 1094 G G Y FG GGYG G PG + GGS + + Q YG Q + Y G SG Sbjct: 235 GGYGGSGDGYNGFGNDGGYGGG---GPGYS---GGSRGYGSGGQGYGNQGSGY--GGSGS 286 Query: 1095 YNSNISYGGVNDNSGSVFN 1151 Y+S + GG GS N Sbjct: 287 YDSYNNGGGRGFGGGSGSN 305
>Q9TTV2:ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 - Saguinus oedipus| (Cotton-top tamarin) Length = 341 Score = 171 bits (433), Expect = 1e-41 Identities = 112/335 (33%), Positives = 158/335 (47%), Gaps = 36/335 (10%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG+S+ T E+ LR Y+E++G++ + V+MRD A+ R+RGFGF+ F+ A + + Sbjct: 10 KLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H IDGR+VE K+AV R++ KK+FVGG+ E R Y Sbjct: 70 RPHSIDGRVVEPKRAVAREES----------GKPGAHVTVKKLFVGGIKEDTEEHHLRDY 119 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F ++G I + ++ D + + RGFGF+T+D D VDK + + +H +NG EV++A+ ++ Sbjct: 120 FAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQ 179 Query: 780 ---------------------------LSPGPSMRSPAGGINYVMNRANSFLNGYTQGYS 878 PGP G Y R F +GY GY Sbjct: 180 EMQEVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGR--GFGDGY-NGYG 236 Query: 879 PSPVG-------GYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFN 1037 P G GYG G GG Y + GGGYG G + G N G G ++F Sbjct: 237 GGPGGGNFGGSPGYG----GGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFG 292 Query: 1038 NSVQYGRQINPYYSGN-SGRYNSNISYGGVNDNSG 1139 N Q P SGN G N YGG N G Sbjct: 293 NYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPG 327 Score = 83.2 bits (204), Expect = 3e-15 Identities = 40/85 (47%), Positives = 57/85 (67%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL+ TE R Y+EQ+G +TD VVM D ++R RGFGF+T+ S VD A+ Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68 Query: 720 KTFHELNGKMVEVKRAVPKELSPGP 794 H ++G++VE KRAV +E S P Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKP 93 Score = 78.2 bits (191), Expect = 1e-13 Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P KLF+GGI DT E LR+YF +YG++ I+ DR +G+ RGFGF+ F D Sbjct: 92 KPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDH 151 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQ 485 ++++++K H I+G E +KA+ R + Q Sbjct: 152 DPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 182
>P51989:RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 - Xenopus laevis| (African clawed frog) Length = 346 Score = 167 bits (423), Expect = 1e-40 Identities = 108/306 (35%), Positives = 152/306 (49%), Gaps = 7/306 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA-----DPAVAE 407 KLFIGG+S++T E+ LR Y+E++G + + V+MRD A+ R+RGFGF+ F+ D A+A Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69 Query: 408 RVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEAD 587 R H IDGR+VE K+AV R++ KK+FVGG+ E Sbjct: 70 R----PHTIDGRVVEPKRAVAREESAK----------PGAHVTVKKLFVGGIKEDTEEHH 115 Query: 588 FRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRA 767 R YFE++G I + ++ D + + RGF F+T+D D VDK + + +H +NG EV++A Sbjct: 116 LREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175 Query: 768 VPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGG-- 941 + K+ + V N N+ G G+ S GG FG GG Sbjct: 176 LSKQ------------EMQDVQNTRNN--RGGNFGFGDSRGGG-------NFGSGPGGNF 214 Query: 942 RSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSNISYGG 1121 R +GGG G G N G G GG N+ YG Y G +G N YGG Sbjct: 215 RGGSDGYGGGRGYGDNGYNGYGGGQGG-GNYGGGPSYGGGRGGGYGGGAGYGNQGGGYGG 273 Query: 1122 VNDNSG 1139 DN G Sbjct: 274 GYDNYG 279 Score = 84.7 bits (208), Expect = 1e-15 Identities = 40/85 (47%), Positives = 58/85 (68%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL+ TE R Y+EQ+GT+TD VVM D ++R RGFGF+T+ + VD A+ Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMA 68 Query: 720 KTFHELNGKMVEVKRAVPKELSPGP 794 H ++G++VE KRAV +E S P Sbjct: 69 TRPHTIDGRVVEPKRAVAREESAKP 93 Score = 77.4 bits (189), Expect = 2e-13 Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P KLF+GGI DT E LREYFE+YG++ I+ D+ +G+ RGF F+ F D Sbjct: 92 KPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDH 151 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQ 485 ++++++K H I+G E +KA+ + + Q Sbjct: 152 DPVDKIVLQKYHTINGHNAEVRKALSKQEMQ 182 Score = 33.9 bits (76), Expect = 2.4 Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Frame = +3 Query: 1362 NFNLSPGAYGRNTGSG-GVNASLNQSSNGYGRNFGDSSAAGGGSIYGDTTWRSGSELDGT 1538 NF G N GSG G N G GR +GD+ G G G + G G Sbjct: 194 NFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDNGYNGYGGGQGGGNYGGGPSYGGG 253 Query: 1539 SPFGYGLGNAASDVTAKSSAGY 1604 GYG G + GY Sbjct: 254 RGGGYGGGAGYGNQGGGYGGGY 275
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 166 bits (420), Expect = 3e-40 Identities = 109/308 (35%), Positives = 157/308 (50%), Gaps = 7/308 (2%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P+ KLFIGG+S++T ++ LR +FE++G + + V+MRD T R+RGFGF+ +A Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66 Query: 399 VAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 + + + H +DGR+VE K+AV R+D Q KKIFVGG+ Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQR----------PGAHLTVKKIFVGGIKEDT 116 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 E R YFEQ+G I + +M D + + RGF F+T+D D+VDK + + +H +NG E Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176 Query: 756 VKRAVPKE--LSPGPSMRSPAGGINYVMNRANSF--LNGYTQGYSPSPVGGYGMRMDARF 923 V++A+ K+ S S R +G N+ R F + + +G + S GG+G Sbjct: 177 VRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGG------ 230 Query: 924 GLLSGGRSSYPSFGGGY-GIGMNFDPGMNPGIGGSSN-FNNSVQYGRQINPYYSGNSGRY 1097 S G Y G GY G G + G N G GGS N F N P GN G Sbjct: 231 ---SRGGGGYGGSGDGYNGFG---NDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGR 284 Query: 1098 NSNISYGG 1121 +S YGG Sbjct: 285 SSG-PYGG 291
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus (Rat)| Length = 320 Score = 165 bits (418), Expect = 5e-40 Identities = 109/308 (35%), Positives = 157/308 (50%), Gaps = 7/308 (2%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P+ KLFIGG+S++T ++ LR +FE++G + + V+MRD T R+RGFGF+ +A Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66 Query: 399 VAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 + + + H +DGR+VE K+AV R+D Q KKIFVGG+ Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQR----------PGAHLTVKKIFVGGIKEDT 116 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 E R YFEQ+G I + +M D + + RGF F+T+D D+VDK + + +H +NG E Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176 Query: 756 VKRAVPKE--LSPGPSMRSPAGGINYVMNRANSF--LNGYTQGYSPSPVGGYGMRMDARF 923 V++A+ K+ S S R +G N+ R F + + +G + S GG+G Sbjct: 177 VRKALCKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGG------ 230 Query: 924 GLLSGGRSSYPSFGGGY-GIGMNFDPGMNPGIGGSSN-FNNSVQYGRQINPYYSGNSGRY 1097 S G Y G GY G G + G N G GGS N F N P GN G Sbjct: 231 ---SRGGGGYGGSGDGYNGFG---NDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGR 284 Query: 1098 NSNISYGG 1121 +S YGG Sbjct: 285 SSG-PYGG 291
>P07909:ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 - Drosophila melanogaster| (Fruit fly) Length = 365 Score = 165 bits (417), Expect = 7e-40 Identities = 111/310 (35%), Positives = 160/310 (51%), Gaps = 11/310 (3%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG+ + T ++ L+ +FEK+G +V+ V+M+D T R+RGFGFI ++ ++ + Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H IDGR+VE K+AVPR D + KK+FVG L E R Y Sbjct: 92 RPHKIDGRVVEPKRAVPRQDIDS----------PNAGATVKKLFVGALKDDHDEQSIRDY 141 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F+ FG I D+ ++ D T + RGF F+ +D D VDK + + H+LNGKMV+VK+A+PK+ Sbjct: 142 FQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQ 201 Query: 780 LSP--------GPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLS 935 GP R AGG NR N + G Y GG +G Sbjct: 202 NDQQGGGGGRGGPGGR--AGG-----NRGN--MGG--GNYGNQNGGGNWNNGGNNWGNNR 250 Query: 936 GGRSSY--PSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSNI 1109 GG ++ SFGGG G G + GG++++ N+ NP+ +GN G N Sbjct: 251 GGNDNWGNNSFGGGGGGGGGYG-------GGNNSWGNN-------NPWDNGNGG---GNF 293 Query: 1110 SYGGVNDNSG 1139 GG N N+G Sbjct: 294 GGGGNNWNNG 303 Score = 82.8 bits (203), Expect = 5e-15 Identities = 38/86 (44%), Positives = 58/86 (67%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL T+ + + +FE++G I DVVVM D T+R RGFGFITY +D+A Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 90 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPS 797 H+++G++VE KRAVP++ P+ Sbjct: 91 SRPHKIDGRVVEPKRAVPRQDIDSPN 116 Score = 77.4 bits (189), Expect = 2e-13 Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 1/90 (1%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P A KLF+G + D +E +R+YF+ +G +V+ I+ D+ TG+ RGF F+ F D Sbjct: 115 PNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYD 174 Query: 399 VAERVIMEK-HMIDGRMVEAKKAVPRDDQQ 485 ++V+++K H ++G+MV+ KKA+P+ + Q Sbjct: 175 PVDKVVLQKQHQLNGKMVDVKKALPKQNDQ 204 Score = 35.8 bits (81), Expect = 0.64 Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Frame = +3 Query: 1359 NNFNLSPGAYGRNTGSGGVNASLNQSSNGYGRN-------FGDSSAAGGGSIYGDTTWRS 1517 N N+ G YG G G N N N G N FG GGG G+ +W + Sbjct: 221 NRGNMGGGNYGNQNGGGNWNNGGNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSWGN 280 Query: 1518 GSELD---GTSPFGYGLGN 1565 + D G FG G N Sbjct: 281 NNPWDNGNGGGNFGGGGNN 299
>Q99729:ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B - Homo sapiens (Human)| Length = 331 Score = 164 bits (414), Expect = 2e-39 Identities = 110/291 (37%), Positives = 149/291 (51%), Gaps = 9/291 (3%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 E DAGK+F+GG+SWDT++ L++YF K+GEVV+ I D TGR+RGFGFI+F D A E Sbjct: 64 EEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVE 123 Query: 408 RVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGL-ASTVTE 581 +V+ +K H +DGR+++ KKA+ KKIFVGGL + TE Sbjct: 124 KVLDQKEHRLDGRVIDPKKAMAMKKDP-----------------VKKIFVGGLNPESPTE 166 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 R YF +FG I + + D + RGF FIT+ E+ V K L K FH ++G E+K Sbjct: 167 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 226 Query: 762 RAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGG 941 A PKE+ S G NR + G G S S GYG + +G G Sbjct: 227 VAQPKEVYQQQQYGSGGRGNRNRGNRGSGG-GGGGGGQSQSWNQGYGNYWNQGYGYQQG- 284 Query: 942 RSSYPSFGGGYGIGMNFDP----GMNPGIG---GSSNFNNSVQYGRQINPY 1073 +G GYG G ++ P G PG GS+N+ S + G N Y Sbjct: 285 ------YGPGYG-GYDYSPYGYYGYGPGYDYSQGSTNYGKSQRRGGHQNNY 328
>P48809:RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C - Drosophila melanogaster| (Fruit fly) Length = 421 Score = 163 bits (413), Expect = 2e-39 Identities = 100/292 (34%), Positives = 151/292 (51%), Gaps = 4/292 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 E + GKLF+GG+SW+T ++ L YF ++G++++ V+M++ +GR+RGFGF+ FADP Sbjct: 3 EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVN 62 Query: 408 RVIME-KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEA 584 V+ H +DGR ++ K PR Q+ K+F+GGL S VTE Sbjct: 63 HVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGY------------KVFLGGLPSNVTET 110 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 D RT+F ++G +T+VV+MYD ++ RGFGF++++ E +V+ + + LNGK VE+K+ Sbjct: 111 DLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKK 170 Query: 765 AVPKELSPGP-SMRSPAGGINYVMNRANSFLNGYTQGYSP--SPVGGYGMRMDARFGLLS 935 A P++ S G S S GG A L + P +P+ M + G + Sbjct: 171 AEPRDGSGGQNSNNSTVGG-------AYGKLGNECSHWGPHHAPIN----MMQGQNGQMG 219 Query: 936 GGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSG 1091 G + P IG P M PG G QYG GNSG Sbjct: 220 GPPLNMP-------IGA---PNMMPGYQGWGTSPQQQQYG-------YGNSG 254
>Q28521:ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 - Macaca mulatta (Rhesus| macaque) Length = 320 Score = 162 bits (411), Expect = 3e-39 Identities = 111/330 (33%), Positives = 165/330 (50%), Gaps = 24/330 (7%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P+ KLFIGG+S++T ++ LR +FE++G + + V+MRD T R+RGFGF+ +A Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66 Query: 399 VAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 + + + H +DGR+VE K+AV R+D Q KKIFVGG+ Sbjct: 67 KVDAAMNARPHKVDGRVVEPKRAVSREDSQR----------PGAHLTVKKIFVGGIKEDT 116 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 E R YFEQ+G I + +M D + + RGF F+T+D ++VDK + + +H +NG E Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCE 176 Query: 756 VKRAVPKE--LSPGPSMRSPAGGINYVMNRANSF--LNGYTQGYSPSPVGGYGMRMDARF 923 V++A+ K+ S S R +G N+ R F + + +G + S GG+G Sbjct: 177 VRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGG------ 230 Query: 924 GLLSGGRSSYPSFGGGY-GIGMNFDPGMNPGIGGS----SNFNNSVQY----------GR 1058 S G Y G GY G G + G N G GGS N+NN GR Sbjct: 231 ---SRGGGGYGGSGDGYNGFG---NDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGR 284 Query: 1059 QINPYYSGNSGRY----NSNISYGGVNDNS 1136 + PY G G+Y + YGG + +S Sbjct: 285 SLGPY--GGGGQYFAKPRNQGGYGGSSSSS 312
>P51990:RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 - Xenopus laevis| (African clawed frog) Length = 358 Score = 162 bits (410), Expect = 5e-39 Identities = 112/338 (33%), Positives = 164/338 (48%), Gaps = 45/338 (13%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA-----DPAVAE 407 KLFIGG+S++T E+ LR ++E++G++ + V+MRD A+ R+RGFGF+ F+ D A++ Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69 Query: 408 RVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEAD 587 R H IDGR+VE K+AV R++ KK+FVGG+ E Sbjct: 70 R----PHTIDGRVVEPKRAVAREESAK----------PGAHVTVKKLFVGGIKEDTEEHH 115 Query: 588 FRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRA 767 R YFE++G I ++ D + + RGFGF+T++ D VDK + + +H +NG EV++A Sbjct: 116 LREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKA 175 Query: 768 VPK-ELSPGPSMRS----------PAGGINYVMNRANSFL---------NGYTQGYSPSP 887 + K E+ + R+ GG N+ +F GY GY+ Sbjct: 176 LSKQEMQDVQNTRNNRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDGYNGYG 235 Query: 888 VGGYGMRMDARFGLLS-------------------GGRSSYPSFGGGYGIGMNFDPGMNP 1010 G G +D + L S GG SY + GGGYG G + G N Sbjct: 236 GGQGGTYLDEKQNLYSSGNFGGGPSYGAGGGRGGYGGGPSYGNQGGGYGGGYDNYGGGNY 295 Query: 1011 GIGGSSN-FNNSVQYGRQINPYYSGNSGRYNSNISYGG 1121 G GG+ N F N Q P SG G + N S GG Sbjct: 296 GGGGNYNDFGNYNQQSSSYGPMKSG--GNFGGNRSMGG 331 Score = 80.9 bits (198), Expect = 2e-14 Identities = 38/85 (44%), Positives = 57/85 (67%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL+ TE R ++EQ+G +TD VVM D ++R RGFGF+T+ + VD A+ Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS 68 Query: 720 KTFHELNGKMVEVKRAVPKELSPGP 794 H ++G++VE KRAV +E S P Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKP 93 Score = 80.5 bits (197), Expect = 2e-14 Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P KLF+GGI DT E LREYFE+YG++ I+ D+ +G+ RGFGF+ F D Sbjct: 92 KPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDH 151 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQ 485 ++++++K H I+G E +KA+ + + Q Sbjct: 152 DPVDKIVLQKYHTINGHNAEVRKALSKQEMQ 182 Score = 32.0 bits (71), Expect = 9.2 Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 1/89 (1%) Frame = +3 Query: 789 GPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGR-SSYPSFG 965 GPS + GG Y N Y G + + G Y + + + SGG S G Sbjct: 273 GPSYGNQGGG--YGGGYDNYGGGNYGGGGNYNDFGNYNQQSSSYGPMKSGGNFGGNRSMG 330 Query: 966 GGYGIGMNFDPGMNPGIGGSSNFNNSVQY 1052 G YG G N+ PG G G + +Y Sbjct: 331 GPYG-GGNYGPGNGSGASGGGGYGGRNRY 358
>P21522:ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog -| Schistocerca americana (American grasshopper) Length = 342 Score = 157 bits (398), Expect = 1e-37 Identities = 101/313 (32%), Positives = 152/313 (48%), Gaps = 14/313 (4%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG+ + T ++ L+++FE++GE+V+ V+M+D T R+RGFGFI ++ + + Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H +DGR+VE K+AVPR + KK+FVGG+ + E D R Y Sbjct: 78 RPHKVDGRVVEPKRAVPRTE----------IGRPEAGATVKKLFVGGIKEEMEENDLRDY 127 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F+Q+GT+ ++ D T++ RGF F+ +D D VDK H++ GK ++VK+A+PK Sbjct: 128 FKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQIRGKHIDVKKALPKG 187 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDA-------------R 920 +PG GG+ A G + S GG G R Sbjct: 188 DAPGGRGGGGRGGVG---GGAGGGWGGGRGDWGGSAGGGGGGGWGGADPWENGRGGGGDR 244 Query: 921 FGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYN 1100 +G GG +GGG G+G G G G S ++N G P G G Y Sbjct: 245 WGGGGGGMGGGDRWGGGGGMGGGDRYG--GGGGRSGGWSND---GYNSGPQSDGFGGGYK 299 Query: 1101 SNISYGGVNDNSG 1139 + G V +SG Sbjct: 300 QSYGGGAVRGSSG 312 Score = 80.1 bits (196), Expect = 3e-14 Identities = 39/79 (49%), Positives = 53/79 (67%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL T+ + +FEQ+G I DVVVM D T+R RGFGFITY VD A Sbjct: 17 RKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76 Query: 720 KTFHELNGKMVEVKRAVPK 776 H+++G++VE KRAVP+ Sbjct: 77 ARPHKVDGRVVEPKRAVPR 95 Score = 75.5 bits (184), Expect = 7e-13 Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 PE A KLF+GGI + E+ LR+YF++YG VV A I+ D+ T + RGF F+ F D Sbjct: 101 PEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYD 160 Query: 399 VAERVIMEK-HMIDGRMVEAKKAVPRDD 479 +++ + + H I G+ ++ KKA+P+ D Sbjct: 161 PVDKICLSRNHQIRGKHIDVKKALPKGD 188
>Q7ZX83:HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A - Xenopus laevis| (African clawed frog) Length = 293 Score = 154 bits (390), Expect = 9e-37 Identities = 96/291 (32%), Positives = 140/291 (48%), Gaps = 9/291 (3%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 + D GK+FIGG+SWDT++ L EY ++GEV++ I D TGR+RGFGF++F D + Sbjct: 22 QQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVD 81 Query: 408 RVI-MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEA 584 +V+ +H +DG++++ K+A ++ KK+FVGGL+ TE Sbjct: 82 KVLETNEHKLDGKLIDPKRAKALKGKEP----------------PKKVFVGGLSPETTEE 125 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 + YF FG I ++ + D T RGF F+TY E+ V K L FH++ E+K Sbjct: 126 QIKQYFGGFGEIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKA 185 Query: 765 AVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLL---- 932 A PKE+ + GG V R + G QG++ GY D +G Sbjct: 186 AQPKEVYRQQQQKQQRGGRGAVTGRGGTRGRGRGQGWNQ----GYNNYYDQNYGGYGNNG 241 Query: 933 SGGRSSYPSFGG----GYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPY 1073 S G Y S+ G GY G N PG G S + + G N Y Sbjct: 242 SYGDQDYNSYSGYDYSGYSYGYN--PGYTEYSGQQSTYGKARGGGNHQNNY 290
>Q99020:ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B - Mus musculus (Mouse)| Length = 285 Score = 154 bits (389), Expect = 1e-36 Identities = 90/225 (40%), Positives = 120/225 (53%), Gaps = 1/225 (0%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 E DAGK+F+GG+SWDT++ L++YF K+GEVV+ I D TGR+RGFGFI+F D + E Sbjct: 71 EEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVE 130 Query: 408 RVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEA 584 +V+ +K H +DGR+++ KKA+ KKIFVGGL TE Sbjct: 131 KVLDQKEHRLDGRVIDPKKAMAMKKDP-----------------VKKIFVGGLNPEATEE 173 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 R YF QFG I + + D + RGF FIT+ ED V K L K FH ++G E+K Sbjct: 174 KIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKV 233 Query: 765 AVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGY 899 A PKE+ S G NR + G T GG+ Sbjct: 234 AQPKEVYQQQQYGSGGRGNRNRGNRGSGGGQGSTNYGKSQRRGGH 278
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus laevis| (African clawed frog) Length = 365 Score = 153 bits (386), Expect = 3e-36 Identities = 104/327 (31%), Positives = 153/327 (46%), Gaps = 22/327 (6%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG+S++T ++ LRE+FE++G + + V+MRD + R+RGFGF+ + + + Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA 74 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H +DGR+VE K+AV R+D KKIFVGG+ E R Y Sbjct: 75 RPHKVDGRVVEPKRAVSREDSSR----------PGAHLTVKKIFVGGIKEDTEEDHLREY 124 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 FEQ+G I + +M D + + RGF F+T++ D+VDK + + +H +N +V++A+ K+ Sbjct: 125 FEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQ 184 Query: 780 --LSPGPSMRSPAGGINY----------VMNRANSF--LNGYTQGYSPSPVGGYGMRMDA 917 S S R G NY R +F G G+ GG G D Sbjct: 185 EMASVSGSQRERGGSGNYGSRGGFGNDNFGGRGGNFGGNRGGGGGFGNRGYGGDGYNGDG 244 Query: 918 RF----GLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGN 1085 + LL R GGGYG G G G GG N +SG+ Sbjct: 245 QLWWQPSLLGWNRGYGAGQGGGYGAGQGGGYG-GGGQGGGYGGNGGYDGYNGGGSGFSGS 303 Query: 1086 SGRYNSNISY---GGVNDNSGSVFNSL 1157 G + S+ Y G N S S F + Sbjct: 304 GGNFGSSGGYNDFGNYNSQSSSNFGPM 330 Score = 89.7 bits (221), Expect = 4e-17 Identities = 43/85 (50%), Positives = 61/85 (71%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL+ T+ R +FEQ+GT+TD VVM D N++R RGFGF+TY S D VD A+ Sbjct: 14 RKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMT 73 Query: 720 KTFHELNGKMVEVKRAVPKELSPGP 794 H+++G++VE KRAV +E S P Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSSRP 98
>Q9Z130:HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like - Mus musculus (Mouse)| Length = 301 Score = 150 bits (378), Expect = 2e-35 Identities = 95/303 (31%), Positives = 145/303 (47%), Gaps = 7/303 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 + D GK+FIGG+SWDT++ L EY ++GEVV+ I D TGR+RGFGF++F D A + Sbjct: 25 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 84 Query: 408 RVI-MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEA 584 +V+ +++H +DG++++ K+A ++ KK+FVGGL+ +E Sbjct: 85 KVLELKEHKLDGKLIDPKRAKALKGKEP----------------PKKVFVGGLSPDTSEE 128 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 + YF FG I ++ + D T RGF FITY E+ V K L +H++ E+K Sbjct: 129 QIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKV 188 Query: 765 AVPKELSPGPSMR------SPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFG 926 A PKE+ + + AGG R + QG++ GYG + Sbjct: 189 AQPKEVYRQQQQQQKGGRGAAAGGRGGARGRGRGQGQNWNQGFNNYYDQGYG-----NYN 243 Query: 927 LLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSN 1106 GG +Y +GG G N+ N G G Y Q + Y + G N Sbjct: 244 SAYGGDQNYSGYGGYDYTGYNYG---NYGYG-----QGYADYSGQQSTYGKASRGGGNHQ 295 Query: 1107 ISY 1115 +Y Sbjct: 296 NNY 298
>O14979:HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like - Homo sapiens (Human)| Length = 420 Score = 150 bits (378), Expect = 2e-35 Identities = 95/303 (31%), Positives = 145/303 (47%), Gaps = 7/303 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 + D GK+FIGG+SWDT++ L EY ++GEVV+ I D TGR+RGFGF++F D A + Sbjct: 144 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 203 Query: 408 RVI-MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEA 584 +V+ +++H +DG++++ K+A ++ KK+FVGGL+ +E Sbjct: 204 KVLELKEHKLDGKLIDPKRAKALKGKEP----------------PKKVFVGGLSPDTSEE 247 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 + YF FG I ++ + D T RGF FITY E+ V K L +H++ E+K Sbjct: 248 QIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKV 307 Query: 765 AVPKELSPGPSMR------SPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFG 926 A PKE+ + + AGG R + QG++ GYG + Sbjct: 308 AQPKEVYRQQQQQQKGGRGAAAGGRGGTRGRGRGQGQNWNQGFNNYYDQGYG-----NYN 362 Query: 927 LLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSN 1106 GG +Y +GG G N+ N G G Y Q + Y + G N Sbjct: 363 SAYGGDQNYSGYGGYDYTGYNYG---NYGYG-----QGYADYSGQQSTYGKASRGGGNHQ 414 Query: 1107 ISY 1115 +Y Sbjct: 415 NNY 417
>Q5ZI72:HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like - Gallus gallus| (Chicken) Length = 301 Score = 149 bits (376), Expect = 4e-35 Identities = 92/280 (32%), Positives = 139/280 (49%), Gaps = 3/280 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 + D GK+FIGG+SWDT++ L EY ++GEVV+ I D TGR+RGFGF++F D A E Sbjct: 26 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVE 85 Query: 408 RVI-MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEA 584 +V+ +++H +DG++++ K+A ++ KK+FVGGL+ +E Sbjct: 86 KVLELKEHKLDGKLIDPKRAKALKGKEP----------------PKKVFVGGLSPDTSEE 129 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 + YF FG I ++ + D T RGF FITY E+ V K L +H++ E+K Sbjct: 130 QIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKV 189 Query: 765 AVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGR 944 A PKE+ + G N R G QG + + G+ D +G + Sbjct: 190 AQPKEVYRQQQQQQKGGKSNASGGRGGGRGRGRGQGQNWNQ--GFNNYYDQGYGNYNSAY 247 Query: 945 S--SYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGR 1058 S SY +GG G N+ P G G + YG+ Sbjct: 248 SDQSYSGYGGYDYSGYNY-PNYGYGPGYTDYSGQQSTYGK 286
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 149 bits (375), Expect = 5e-35 Identities = 103/304 (33%), Positives = 144/304 (47%), Gaps = 5/304 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG++ T+E LR +FE +G + + V++ + T R+R FGF+ +++ A+ + Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 H +DG VE K+AV R+D + KK+FVGGL V E D + Sbjct: 68 SPHAVDGNTVELKRAVSREDSAR----------PGAHAKVKKLFVGGLKGDVAEGDLIEH 117 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F QFGT+ ++ D + + RGFGF+ + + DA DKA FH + G VEVK+AVPKE Sbjct: 118 FSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177 Query: 780 ----LSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRS 947 G RS GG NG ++G GG G +G GG Sbjct: 178 DIYSGGGGGGSRSSRGGRGGRGRGGGRDQNGLSKG------GGGGYNSYGGYG--GGGGG 229 Query: 948 SYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSNISYGGVN 1127 Y ++GGG G G GG F + Q+ P SG G S+GG Sbjct: 230 GYNAYGGGGGGSSYGGSDYGNGFGG---FGSYSQHQSSYGPMKSGGGGG-GGGSSWGG-R 284 Query: 1128 DNSG 1139 NSG Sbjct: 285 SNSG 288 Score = 73.6 bits (179), Expect = 3e-12 Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P A KLF+GG+ D E L E+F ++G V +A I+ D+ +G+ RGFGF+ F + Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHD 150 Query: 399 VAERVIMEK-HMIDGRMVEAKKAVPRDD 479 A++ + K H I G VE KKAVP++D Sbjct: 151 AADKAAVVKFHPIQGHRVEVKKAVPKED 178
>Q640A2:HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 297 Score = 149 bits (375), Expect = 5e-35 Identities = 94/294 (31%), Positives = 137/294 (46%), Gaps = 12/294 (4%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 + D GK+FIGG+SWDT++ L EY ++GEVV+ I D TGR+RGFGF++F D + Sbjct: 22 QQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVD 81 Query: 408 RVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEA 584 +V+ K H +DG++++ K+A ++ KK+FVGGL+ TE Sbjct: 82 KVLETKEHKLDGKLIDPKRAKALKGKEP----------------PKKVFVGGLSPETTEE 125 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 + YF FG I ++ + D T RGF F+TY E+ V K L FH++ E+K Sbjct: 126 QIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKV 185 Query: 765 AVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGR 944 A PKE+ + GG R + G QG++ GY D +G G Sbjct: 186 AQPKEVYRQQQQKQQKGGRGAATGRGGARGRGRGQGWNQ----GYSNYYDQNYGSY-GNN 240 Query: 945 SSYPSFG----------GGYGIG-MNFDPGMNPGIGGSSNFNNSVQYGRQINPY 1073 SY G GY G ++ G G S + + G N Y Sbjct: 241 GSYADQGYNNSYSGYDYSGYNYGSYGYNQGYTDYSGQQSTYGKARGGGNHQNNY 294
>Q22037:ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 - Caenorhabditis elegans| Length = 346 Score = 148 bits (373), Expect = 9e-35 Identities = 88/273 (32%), Positives = 144/273 (52%), Gaps = 4/273 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 EPE + K+F+GG++ +T +D +RE++ ++GE+ + ++MRD T R+RGFGF+ F+ Sbjct: 18 EPE---NLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 74 Query: 396 AVAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 + + ++ H+IDG+ V+ K+AVPRDD+ TK+++V G+ Sbjct: 75 TEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNR----------SESNVSTKRLYVSGVRED 124 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMV 752 TE YF ++GT+T ++ D TQ+PRGFGF+T+D D+VD+ + + H +NG Sbjct: 125 HTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRC 184 Query: 753 EVKRAVPK-ELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGL 929 +V++ + K E+S R R +G GY+ GG G A+ Sbjct: 185 DVRKGLSKDEMSKAQMNRDRE-------TRGGRSRDGQRGGYNGGGGGGGGWGGPAQ--- 234 Query: 930 LSGGRSSY--PSFGGGYGIGMNFDPGMNPGIGG 1022 GG +Y P GG G G ++ G GG Sbjct: 235 -RGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGG 266
>Q6NU14:HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B - Xenopus laevis| (African clawed frog) Length = 291 Score = 146 bits (368), Expect = 3e-34 Identities = 93/291 (31%), Positives = 136/291 (46%), Gaps = 3/291 (1%) Frame = +3 Query: 210 EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA 389 E P+ K+FIGG+SWDT++ L EY ++GEV++ I D TGR+RGFGF++F Sbjct: 24 ESNPDFFLIRSKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFK 83 Query: 390 DPAVAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLA 566 D ++V+ K H +DG++++ K+A ++ KK+FVGGL+ Sbjct: 84 DAVSVDKVLETKEHKLDGKLIDPKRAKALQGKEP----------------PKKVFVGGLS 127 Query: 567 STVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGK 746 TE + YF FG I ++ + D T RGF F+TY E+ V K L FH++ Sbjct: 128 PETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTDEEPVQKLLESRFHQIGTG 187 Query: 747 MVEVKRAVPKELSPGPSMRSPAGGINYV--MNRANSFLNGYTQGYSPSPVGGYGMRMDAR 920 E+K A PKE+ + GG R + N Y Q Y GGYG + Sbjct: 188 KCEIKAAQPKEVYRQQQQKQQKGGRGGTRGRGRGQGYSNYYDQNY-----GGYG--NNDS 240 Query: 921 FGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPY 1073 +G G Y G YG ++ G G S + + G N Y Sbjct: 241 YG--DQGYGGYDYSGYNYG-NYGYNQGYTDYSGQQSTYGKARGGGNHQNNY 288
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila melanogaster| (Fruit fly) Length = 385 Score = 145 bits (367), Expect = 4e-34 Identities = 106/309 (34%), Positives = 143/309 (46%), Gaps = 10/309 (3%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG+ + T +D L+ +FEK+G +V+ V+M+D T R+RGFGFI ++ + + Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA 84 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H IDGR VE K+AVPR + + KK+FVGGL E R Y Sbjct: 85 RPHKIDGRTVEPKRAVPRQEIDS----------PNAGATVKKLFVGGLRDDHDEECLREY 134 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F+ FG I V ++ D +T + RGF FI +D D VDK + + H + K ++VK+A+ K+ Sbjct: 135 FKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ 194 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSYPS 959 M GG RA G G GG G R GG Sbjct: 195 -----DMDRQGGGGGRGGPRA-----GGRGGQGDRGQGGGGWGGQNRQN--GGGNWGGAG 242 Query: 960 FGGGYG-IGMNFDPGMNPGIG--------GSSNFNNSVQYGRQINPYYSGNSGRYNSNIS 1112 GGG+G G NF G G G G +NN N G G NSN S Sbjct: 243 GGGGFGNSGGNFGGGQGGGSGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGGGNSNGS 302 Query: 1113 YGGVNDNSG 1139 +GG G Sbjct: 303 WGGNGGGGG 311 Score = 79.7 bits (195), Expect = 4e-14 Identities = 38/86 (44%), Positives = 55/86 (63%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL T+ + +FE++G I DVVVM D T+R RGFGFITY +D A Sbjct: 24 RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 83 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPS 797 H+++G+ VE KRAVP++ P+ Sbjct: 84 ARPHKIDGRTVEPKRAVPRQEIDSPN 109 Score = 73.6 bits (179), Expect = 3e-12 Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P A KLF+GG+ D +E+ LREYF+ +G++V I+ D+ TG+ RGF FI F D Sbjct: 108 PNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYD 167 Query: 399 VAERVIMEK-HMIDGRMVEAKKAVPRDD 479 +++I++K H I + ++ KKA+ + D Sbjct: 168 PVDKIILQKTHSIKNKTLDVKKAIAKQD 195
>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)| Length = 344 Score = 145 bits (365), Expect = 7e-34 Identities = 102/304 (33%), Positives = 141/304 (46%), Gaps = 8/304 (2%) Frame = +3 Query: 234 DAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERV 413 D KLF+GG+SW+T E LR++F KYGE+ + D TGR+RGF FIVF + ++V Sbjct: 54 DDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113 Query: 414 -IMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADF 590 ++H+I+ + V+ KKA R KIFVGGL + +++ + Sbjct: 114 SAADEHIINSKKVDPKKAKARHG---------------------KIFVGGLTTEISDEEI 152 Query: 591 RTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAV 770 +TYF QFG I +V + +D + +GF FIT+DSE V L ++ GK V+VKRA Sbjct: 153 KTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRAT 212 Query: 771 PKELSP--GPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGR 944 PK + G P GG + G GY GGY + D G+ Sbjct: 213 PKPENQMMGGMRGGPRGG-----------MRGGRGGYGGR--GGYNNQWD--------GQ 251 Query: 945 SSYPSFGGGYGIGMNFDPGMNPGIGG-----SSNFNNSVQYGRQINPYYSGNSGRYNSNI 1109 SY +GGGYG G GG + + N YG Y G G Sbjct: 252 GSYGGYGGGYG---------GYGAGGYGDYYAGGYYNGYDYGYDGYGYGGGFEGN----- 297 Query: 1110 SYGG 1121 YGG Sbjct: 298 GYGG 301 Score = 58.5 bits (140), Expect = 9e-08 Identities = 26/89 (29%), Positives = 54/89 (60%), Gaps = 1/89 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF-ADPAVA 404 +A GK+F+GG++ + +++ ++ YF ++G +VE + D+ + +GF FI F ++ V Sbjct: 132 KARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVT 191 Query: 405 ERVIMEKHMIDGRMVEAKKAVPRDDQQAL 491 + + K I G+ V+ K+A P+ + Q + Sbjct: 192 DLLKTPKQKIAGKEVDVKRATPKPENQMM 220
>Q3SWU3:HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like - Rattus norvegicus| (Rat) Length = 322 Score = 144 bits (363), Expect = 1e-33 Identities = 95/305 (31%), Positives = 142/305 (46%), Gaps = 7/305 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-M 419 K+FIGG+SWDT++ L EY ++GEVV+ I D TGR+RGFGF++F D A ++V+ + Sbjct: 52 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 111 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 ++H +DG++++ K+A ++ KK+FVGGL+ +E + Y Sbjct: 112 KEHKLDGKLIDPKRAKALKGKEP----------------PKKVFVGGLSPDTSEEQIKEY 155 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG I ++ + D T RGF FITY E+ V K L +H++ E+K A PKE Sbjct: 156 FGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 215 Query: 780 LSPGPSMR------SPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGG 941 + + + AGG R + QG++ GYG A G Sbjct: 216 VYRQQQQQQKGGRGAAAGGRGGARGRGRGQGQNWNQGFNNYYDQGYGNYNSAY------G 269 Query: 942 RSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSNISYGG 1121 SY +GG G N+ S YG+ YSG Y GG Sbjct: 270 DESYSGYGGYDYTGYNY---------------GSYGYGQGYTD-YSGQQSTYGKASRGGG 313 Query: 1122 VNDNS 1136 + N+ Sbjct: 314 NHQNN 318
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 144 bits (362), Expect = 2e-33 Identities = 72/188 (38%), Positives = 111/188 (59%), Gaps = 1/188 (0%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P+ KLFIGG+S++T ++ LR +FE++G + + V+MRD T R+RGFGF+ +A Sbjct: 6 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 65 Query: 399 VAERVIMEK-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 + + + H +DGR+VE K+AV R+D Q KKIFVGG+ Sbjct: 66 EVDAAMNARPHKVDGRVVEPKRAVSREDSQR----------PGAHLTVKKIFVGGIKEDT 115 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 E R YFEQ+G I + +M D + + RGF F+T+D D+VDK + + +H +NG E Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 175 Query: 756 VKRAVPKE 779 V++A+ K+ Sbjct: 176 VRKALSKQ 183 Score = 89.4 bits (220), Expect = 5e-17 Identities = 42/85 (49%), Positives = 62/85 (72%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGL+ T+ R++FEQ+GT+TD VVM D NT+R RGFGF+TY + + VD A+ Sbjct: 13 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 72 Query: 720 KTFHELNGKMVEVKRAVPKELSPGP 794 H+++G++VE KRAV +E S P Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSQRP 97
>Q60668:HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 - Mus musculus (Mouse)| Length = 355 Score = 136 bits (342), Expect = 3e-31 Identities = 93/293 (31%), Positives = 135/293 (46%), Gaps = 2/293 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+FIGG+SWDT + L++YF K+GEVV+ + D TGR+RGFGF++F + ++V+ + Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 K H ++G++++ K+A ++ + KKIFVGGL+ E R Y Sbjct: 158 KEHKLNGKVIDPKRAKAMKTKEPV----------------KKIFVGGLSPDTPEEKIREY 201 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG + + + D+ T + RGF FIT+ E+ V K + K +H + E+K A+ KE Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261 Query: 780 LSPGPSMRSPAGGI-NYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSYP 956 GG R + QGYS GYG +G S G Y Sbjct: 262 QYQQQQQWGSRGGFAGRARGRGGGPSQNWNQGYSNYWNQGYG-----NYGYNSQGYGGY- 315 Query: 957 SFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSNISY 1115 GGY G N G N YG+ S G NS Y Sbjct: 316 ---GGYDY-----TGYNNYYGYGDYSNQQSGYGK-----VSRRGGHQNSYKPY 355
>Q14103:HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 - Homo sapiens (Human)| Length = 355 Score = 136 bits (342), Expect = 3e-31 Identities = 93/293 (31%), Positives = 135/293 (46%), Gaps = 2/293 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+FIGG+SWDT + L++YF K+GEVV+ + D TGR+RGFGF++F + ++V+ + Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 K H ++G++++ K+A ++ + KKIFVGGL+ E R Y Sbjct: 158 KEHKLNGKVIDPKRAKAMKTKEPV----------------KKIFVGGLSPDTPEEKIREY 201 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG + + + D+ T + RGF FIT+ E+ V K + K +H + E+K A+ KE Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 261 Query: 780 LSPGPSMRSPAGGI-NYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSYP 956 GG R + QGYS GYG +G S G Y Sbjct: 262 QYQQQQQWGSRGGFAGRARGRGGGPSQNWNQGYSNYWNQGYG-----NYGYNSQGYGGY- 315 Query: 957 SFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSNISY 1115 GGY G N G N YG+ S G NS Y Sbjct: 316 ---GGYDY-----TGYNNYYGYGDYSNQQSGYGK-----VSRRGGHQNSYKPY 355
>Q9JJ54:HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 - Rattus norvegicus| (Rat) Length = 353 Score = 135 bits (339), Expect = 8e-31 Identities = 80/249 (32%), Positives = 122/249 (48%), Gaps = 2/249 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+FIGG+SWDT + L++YF K+G+VV+ + D TGR+RGFGF++F + ++V+ + Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 K H ++G++++ K+A ++ + KKIFVGGL+ E R Y Sbjct: 156 KEHKLNGKVIDPKRAKAMKTKEPV----------------KKIFVGGLSPDTPEEKIREY 199 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG + + + D+ T + RGF FIT+ E+ V K + K +H + E+K A+ KE Sbjct: 200 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 259 Query: 780 LSPGPSMRSPAGGI-NYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSYP 956 GG R + QGYS GYG G G Y Sbjct: 260 QYQQQQQWGSRGGFAGRARGRGGGPSQNWNQGYSNYWNQGYGSYGYNSQGYGGYGGYDYT 319 Query: 957 SFGGGYGIG 983 + YG G Sbjct: 320 GYNSYYGYG 328
>Q02926:RB97D_DROME Ribonucleoprotein RB97D - Drosophila melanogaster (Fruit fly)| Length = 471 Score = 133 bits (334), Expect = 3e-30 Identities = 70/177 (39%), Positives = 107/177 (60%), Gaps = 1/177 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIGG++ T E+ L+ ++ ++G+VV+ V+MRD AT R+RGFGFI + + +R Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN 92 Query: 423 K-HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + H+IDG+ VEAK+A+PR ++++ KK+FVGGL E R Y Sbjct: 93 RPHIIDGKTVEAKRALPRPERES----------RETNISVKKLFVGGLKDNHDEECLREY 142 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAV 770 F QFG + V ++ D T + RGF F+ +D DAVDKA+ K H + V+VK+++ Sbjct: 143 FLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSI 199 Score = 79.0 bits (193), Expect = 7e-14 Identities = 38/79 (48%), Positives = 53/79 (67%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 +K+F+GGLA TE + + ++ Q+G + DVVVM D T+R RGFGFITY VD+A Sbjct: 32 RKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQE 91 Query: 720 KTFHELNGKMVEVKRAVPK 776 H ++GK VE KRA+P+ Sbjct: 92 NRPHIIDGKTVEAKRALPR 110 Score = 65.1 bits (157), Expect = 1e-09 Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 6/97 (6%) Frame = +3 Query: 213 PEPEMEA-----DAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGF 377 P PE E+ KLF+GG+ + +E+ LREYF ++G VV ++ D+ TG+ RGF F Sbjct: 109 PRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAF 168 Query: 378 IVFAD-PAVAERVIMEKHMIDGRMVEAKKAVPRDDQQ 485 + F D AV + ++ ++H I V+ KK++ D++ Sbjct: 169 VEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKK 205
>Q13148:TADBP_HUMAN TAR DNA-binding protein 43 - Homo sapiens (Human)| Length = 414 Score = 103 bits (258), Expect = 2e-21 Identities = 90/331 (27%), Positives = 139/331 (41%), Gaps = 29/331 (8%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + G+ W T E L+EYF +GEV+ + +D TG ++GFGF+ F + +V+ ++ Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR 165 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 HMIDGR + K + Q R++K+FVG +TE + R +F Sbjct: 166 HMIDGRWCDCKLPNSKQSQD-------------EPLRSRKVFVGRCTEDMTEDELREFFS 212 Query: 606 QFGTITDVVVMYDHNTQRP-RGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKEL 782 Q+G + DV + +P R F F+T+ ++D + ++L + G V + A PK Sbjct: 213 QYGDVMDVFI------PKPFRAFAFVTF-ADDQIAQSLCGEDLIIKGISVHISNAEPKHN 265 Query: 783 SPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSYPSF 962 S N + R+ F G +P G G ++R G G + + Sbjct: 266 S------------NRQLERSGRF------GGNPGGFGNQGGFGNSRGGGAGLGNNQGSNM 307 Query: 963 GGGYGIG-MNFDPGMNPGI---------------------GGSSNFNNSVQYGRQINPYY 1076 GGG G + +P M G S N N R+ N + Sbjct: 308 GGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQREPNQAF 367 Query: 1077 -SGNSGRYNSN----ISYGGV-NDNSGSVFN 1151 SGN+ SN I +G N SGS FN Sbjct: 368 GSGNNSYSGSNSGAAIGWGSASNAGSGSGFN 398 Score = 51.6 bits (122), Expect = 1e-05 Identities = 27/77 (35%), Positives = 42/77 (54%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+G + D ED LRE+F +YG+V++ I + R F F+ FAD +A+ + E Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCGE 246 Query: 423 KHMIDGRMVEAKKAVPR 473 +I G V A P+ Sbjct: 247 DLIIKGISVHISNAEPK 263 Score = 43.1 bits (100), Expect = 0.004 Identities = 25/87 (28%), Positives = 40/87 (45%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 713 +T + V GL TE D + YF FG + V V D T +GFGF+ + + K Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161 Query: 714 LFKTFHELNGKMVEVKRAVPKELSPGP 794 + + H ++G+ + K K+ P Sbjct: 162 MSQR-HMIDGRWCDCKLPNSKQSQDEP 187
>Q921F2:TADBP_MOUSE TAR DNA-binding protein 43 - Mus musculus (Mouse)| Length = 414 Score = 97.8 bits (242), Expect = 1e-19 Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 3/306 (0%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + G+ W T E L++YF +GEV+ + +D TG ++GFGF+ F + +V+ ++ Sbjct: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR 165 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 HMIDGR + K +P Q R++K+FVG +T + + +F Sbjct: 166 HMIDGRWCDCK--LPNSKQS-----------PDEPLRSRKVFVGRCTEDMTAEELQQFFC 212 Query: 606 QFGTITDVVVMYDHNTQRP-RGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKEL 782 Q+G + DV + +P R F F+T+ ++D V ++L + G V + A PK Sbjct: 213 QYGEVVDVFI------PKPFRAFAFVTF-ADDKVAQSLCGEDLIIKGISVHISNAEPKHN 265 Query: 783 SPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSYPSF 962 S N + R+ F G +P G G ++R GG + Sbjct: 266 S------------NRQLERSGRF------GGNPGGFGNQGGFGNSR----GGGAGLGNNQ 303 Query: 963 GGGYGIGMNFDP-GMNPGIGGSSNFNNSVQYGRQ-INPYYSGNSGRYNSNISYGGVNDNS 1136 GG G GMNF +NP + ++ +G + SG +N S G + Sbjct: 304 GGNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGSMQREP 363 Query: 1137 GSVFNS 1154 F S Sbjct: 364 NQAFGS 369 Score = 47.0 bits (110), Expect = 3e-04 Identities = 27/85 (31%), Positives = 44/85 (51%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 P+ + K+F+G + D + L+++F +YGEVV+ I + R F F+ FAD Sbjct: 184 PDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADDK 238 Query: 399 VAERVIMEKHMIDGRMVEAKKAVPR 473 VA+ + E +I G V A P+ Sbjct: 239 VAQSLCGEDLIIKGISVHISNAEPK 263 Score = 45.1 bits (105), Expect = 0.001 Identities = 28/91 (30%), Positives = 44/91 (48%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 713 +T + V GL TE D + YF FG + V V D T +GFGF+ + + K Sbjct: 102 KTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161 Query: 714 LFKTFHELNGKMVEVKRAVPKELSPGPSMRS 806 + + H ++G+ + K K+ SP +RS Sbjct: 162 MSQR-HMIDGRWCDCKLPNSKQ-SPDEPLRS 190
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 90.9 bits (224), Expect = 2e-17 Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 3/269 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +F+G +SW+ ++ L + FE+YG +V A ++ D +GR++G+G++ F P A+ + Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324 Query: 426 --HMIDGRMVEAKKAVPRD-DQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRT 596 IDGRMV + PR + Q + +FVG L+ TE D T Sbjct: 325 GTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFNATEDDLST 384 Query: 597 YFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPK 776 F G I + + D + R +GFG++T+ D+ K + H + G+ + + P+ Sbjct: 385 AFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEMNGHFIAGRPCRLDFSTPR 444 Query: 777 ELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSYP 956 T G S GG+G R GG Sbjct: 445 -----------------------------TGGGSRGGRGGFGGR---------GGFGGRG 466 Query: 957 SFGGGYGIGMNFDPGMNPGIGGSSNFNNS 1043 FGGG G G NP G + F+ + Sbjct: 467 GFGGGRGRGRGGARSGNPNRGSVAPFSGN 495 Score = 50.1 bits (118), Expect = 3e-05 Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 1/94 (1%) Frame = +3 Query: 537 TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 T +FVG L+ V + FE++GTI V+ D + R +G+G++ +++ +A A+ Sbjct: 262 TCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAV 321 Query: 717 FKT-FHELNGKMVEVKRAVPKELSPGPSMRSPAG 815 E++G+MV + + P+ +P P + AG Sbjct: 322 AANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAG 355 Score = 47.0 bits (110), Expect = 3e-04 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +3 Query: 222 EMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 ++ + +F+G +S++ ED L F G++ + D +GR +GFG++ F+D Sbjct: 360 QLSEPSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDS 419 Query: 402 AERVI-MEKHMIDGRMVEAKKAVPR 473 A++ + M H I GR + PR Sbjct: 420 AKKCVEMNGHFIAGRPCRLDFSTPR 444
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 88.6 bits (218), Expect = 8e-17 Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 3/178 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+G + + + L E FE+ G V ++ D+ TGR+RGFGF+ + E + Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147 Query: 423 --KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRT 596 + +DGR + P + ++ + +++VG LA V + T Sbjct: 148 FNGYELDGRALRVNSGPPPEKREN-SSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALET 206 Query: 597 YFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH-ELNGKMVEVKRA 767 F + G + D V+YD ++ R RGFGF+TY S + V+ A+ +LNG+ + V A Sbjct: 207 LFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPA 264 Score = 54.7 bits (130), Expect = 1e-06 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Frame = +3 Query: 237 AGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI 416 + ++++G ++W ++D L F + G+VV+A ++ DR +GR+RGFGF+ ++ I Sbjct: 187 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 246 Query: 417 MEKHMID--GRMVEAKKAVPR 473 +D GR + A R Sbjct: 247 ESLDGVDLNGRAIRVSPAEAR 267
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 87.4 bits (215), Expect = 2e-16 Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 2/170 (1%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 PEP EA KLF+G +++D N L FE+ G V A ++ +R T ++RGFGF+ + Sbjct: 144 PEPSEEA---KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSS 200 Query: 393 PAVAERVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLA 566 AE + ++ ++GR++ KA PR + +++VG L Sbjct: 201 VDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAF--------RVYVGNLP 252 Query: 567 STVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 V F + G + + V+YD T R RGFGF+T D +++A+ Sbjct: 253 WDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAI 302 Score = 63.9 bits (154), Expect = 2e-09 Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 2/94 (2%) Frame = +3 Query: 198 GWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGF 377 G + E P + A ++++G + WD + RL + F ++G+VVEA ++ DR TGR+RGFGF Sbjct: 230 GSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGF 289 Query: 378 IVFADPAVAERVI--MEKHMIDGRMVEAKKAVPR 473 + +D I ++ ++GR + A R Sbjct: 290 VTMSDVDELNEAISALDGQNLEGRAIRVNVAEER 323 Score = 62.4 bits (150), Expect = 6e-09 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 K+FVG LA V FEQ GT+ V+Y+ T + RGFGF+T S D + A+ K Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210 Query: 723 -TFHELNGKMVEVKRAVPKELSP--GPSMRSPA 812 ++LNG+++ V +A P+ P P + PA Sbjct: 211 FNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 243
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 86.3 bits (212), Expect = 4e-16 Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 4/199 (2%) Frame = +3 Query: 183 FPGSTGWK*EPEPEME-ADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGR 359 FP G E E E ++ KLF+G + +D + + L + F++ G V A ++ +R T R Sbjct: 77 FPSFVGEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDR 136 Query: 360 ARGFGFIVFADPAVAERVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXX 533 +RGFGF+ + A++ + ++ ++GR++ KA PR + Sbjct: 137 SRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSR--------PERAPRTFQ 188 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 713 T +I+VG + + +A F + G + V++D + R RGFGF+T SE + +A Sbjct: 189 PTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEA 248 Query: 714 LFKTFHE-LNGKMVEVKRA 767 + + L+G+ + V A Sbjct: 249 IANLDGQTLDGRTIRVNAA 267 Score = 61.2 bits (147), Expect = 1e-08 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%) Frame = +3 Query: 198 GWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGF 377 G + E P ++++G I WD ++ RL + F ++G+VV A ++ DR +GR+RGFGF Sbjct: 177 GSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGF 236 Query: 378 IVFADPAVAERVI--MEKHMIDGRMVEAKKAVPR 473 + + A I ++ +DGR + A R Sbjct: 237 VTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEER 270 Score = 57.8 bits (138), Expect = 2e-07 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-F 719 K+FVG L + F+Q G + V+Y+ T R RGFGF+T + + DKA+ Sbjct: 98 KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 157 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMRS 806 + ++LNG+++ V +A P+ P + R+ Sbjct: 158 YSQYDLNGRLLTVNKAAPRGSRPERAPRT 186
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 85.9 bits (211), Expect = 5e-16 Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 8/183 (4%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+G + + + L E FE+ G V ++ D+ TGR+RGFGF+ + E + Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147 Query: 423 --KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXX-----RTKKIFVGGLASTVTE 581 + +DGR + P + ++ + +++VG LA V + Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQ 207 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH-ELNGKMVEV 758 T F + G + D V+YD ++ R RGFGF+TY S + V+ A+ +LNG+ + V Sbjct: 208 DALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRV 267 Query: 759 KRA 767 A Sbjct: 268 SPA 270 Score = 54.7 bits (130), Expect = 1e-06 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Frame = +3 Query: 237 AGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI 416 + ++++G ++W ++D L F + G+VV+A ++ DR +GR+RGFGF+ ++ I Sbjct: 193 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 252 Query: 417 MEKHMID--GRMVEAKKAVPR 473 +D GR + A R Sbjct: 253 ESLDGVDLNGRAIRVSPAEAR 273
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 83.6 bits (205), Expect = 3e-15 Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 3/187 (1%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 EP EA KLF+G + +D + ++L F+ G V A ++ +R T R+RGFGF+ + Sbjct: 50 EPPEEA---KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTV 106 Query: 396 AVAERVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAS 569 AE+ + + + +DGR + KA PR + + +++VG L Sbjct: 107 EEAEKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEP--------SCRVYVGNLPW 158 Query: 570 TVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE-LNGK 746 V + F + G + V+ D T R RGFGF+T SE V+ A+ + L+G+ Sbjct: 159 DVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGR 218 Query: 747 MVEVKRA 767 V V A Sbjct: 219 AVRVNVA 225 Score = 60.5 bits (145), Expect = 2e-08 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 ++++G + WD + RL + F ++G+VV A ++ DR TGR+RGFGF+ + + I Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 209 Query: 417 MEKHMIDGRMVEAKKAVPR 473 ++ +DGR V A R Sbjct: 210 LDGQTLDGRAVRVNVAEER 228
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 82.0 bits (201), Expect = 8e-15 Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 3/189 (1%) Frame = +3 Query: 210 EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA 389 E E + + KLF+G + +D + + L FE+ G V A ++ +R T ++RGFGF+ + Sbjct: 126 EEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMS 185 Query: 390 DPAVAERVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGL 563 AE+ + ++ ++GR++ KA R ++ ++ +I+VG + Sbjct: 186 TVEEAEKAVEMYNRYDVNGRLLTVNKAARRGER--------PERPPRTFEQSYRIYVGNI 237 Query: 564 ASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELN 740 + +A F + G + V+YD T R RGFGF+T SE + A+ L+ Sbjct: 238 PWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLD 297 Query: 741 GKMVEVKRA 767 G+ + V A Sbjct: 298 GRTIRVNVA 306 Score = 61.2 bits (147), Expect = 1e-08 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 2/94 (2%) Frame = +3 Query: 198 GWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGF 377 G + E P + ++++G I W ++ RL + F ++G+VV A ++ DR TGR+RGFGF Sbjct: 216 GERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGF 275 Query: 378 IVFADPAVAERVI--MEKHMIDGRMVEAKKAVPR 473 + A A I ++ +DGR + A R Sbjct: 276 VTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR 309
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 80.9 bits (198), Expect = 2e-14 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Frame = +3 Query: 225 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPA 398 M +D GKLF+GG+S+DTNE L + F KYG++ E V+++DR T R+RGFGF+ F D A Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60 Query: 399 VAERVIMEKHMIDGRMVEAKKAVPRDDQQA 488 + M +DGR + +A D ++ Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90 Score = 73.9 bits (180), Expect = 2e-12 Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 10/154 (6%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALF 719 K+FVGGL+ E F ++G I++VVV+ D TQR RGFGF+T+++ +DA D + Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMR-SPAGGINYV---MNRANSFL-----NGYTQG 872 ++G+ + V +A + R AGG + +R F GY G Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGGDRGYGGG 126 Query: 873 YSPSPVGGYGMRMDARFGLLSGGRSSYPSFGGGY 974 S GGYG D GG Y S GG Y Sbjct: 127 RFESRSGGYGGSRDYYASRSQGGSYGYRSSGGSY 160
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 80.9 bits (198), Expect = 2e-14 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Frame = +3 Query: 225 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPA 398 M +D GKLF+GG+S+DTNE L + F KYG++ E V+++DR T R+RGFGF+ F D A Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60 Query: 399 VAERVIMEKHMIDGRMVEAKKAVPRDDQQA 488 + M +DGR + +A D ++ Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90 Score = 69.3 bits (168), Expect = 5e-11 Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 3/147 (2%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALF 719 K+FVGGL+ E F ++G I++VVV+ D TQR RGFGF+T+++ +DA D + Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGY 899 ++G+ + V +A + R + G G+++G G Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRGRGFSRGGGDRGYG-- 124 Query: 900 GMRMDARFGLLSGGRSSYP--SFGGGY 974 G R ++R G G R Y S GGY Sbjct: 125 GNRFESRSGGYGGSRDYYSSRSQSGGY 151
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 80.9 bits (198), Expect = 2e-14 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Frame = +3 Query: 225 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPA 398 M +D GKLF+GG+S+DTNE L + F KYG++ E V+++DR T R+RGFGF+ F D A Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60 Query: 399 VAERVIMEKHMIDGRMVEAKKAVPRDDQQA 488 + M +DGR + +A D ++ Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90 Score = 73.9 bits (180), Expect = 2e-12 Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 10/154 (6%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALF 719 K+FVGGL+ E F ++G I++VVV+ D TQR RGFGF+T+++ +DA D + Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMR-SPAGGINYV---MNRANSFL-----NGYTQG 872 ++G+ + V +A + R AGG + +R F GY G Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGGDRGYGGG 126 Query: 873 YSPSPVGGYGMRMDARFGLLSGGRSSYPSFGGGY 974 S GGYG D GG Y S GG Y Sbjct: 127 RFESRSGGYGGSRDYYASRSQGGSYGYRSSGGSY 160
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 80.9 bits (198), Expect = 2e-14 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Frame = +3 Query: 225 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPA 398 M +D GKLF+GG+S+DTNE L + F KYG++ E V+++DR T R+RGFGF+ F D A Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60 Query: 399 VAERVIMEKHMIDGRMVEAKKAVPRDDQQA 488 + M +DGR + +A D ++ Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90 Score = 69.3 bits (168), Expect = 5e-11 Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 3/147 (2%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALF 719 K+FVGGL+ E F ++G I++VVV+ D TQR RGFGF+T+++ +DA D + Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGY 899 ++G+ + V +A + R + G G+++G G Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRGRGFSRGGGDRGYG-- 124 Query: 900 GMRMDARFGLLSGGRSSYP--SFGGGY 974 G R ++R G G R Y S GGY Sbjct: 125 GNRFESRSGGYGGSRDYYSSRSQSGGY 151
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 80.9 bits (198), Expect = 2e-14 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Frame = +3 Query: 225 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPA 398 M +D GKLF+GG+S+DTNE L + F KYG++ E V+++DR T R+RGFGF+ F D A Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60 Query: 399 VAERVIMEKHMIDGRMVEAKKAVPRDDQQA 488 + M +DGR + +A D ++ Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90 Score = 73.9 bits (180), Expect = 2e-12 Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 10/154 (6%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALF 719 K+FVGGL+ E F ++G I++VVV+ D TQR RGFGF+T+++ +DA D + Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMR-SPAGGINYV---MNRANSFL-----NGYTQG 872 ++G+ + V +A + R AGG + +R F GY G Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGGDRGYGGG 126 Query: 873 YSPSPVGGYGMRMDARFGLLSGGRSSYPSFGGGY 974 S GGYG D GG Y S GG Y Sbjct: 127 RFESRSGGYGGSRDYYASRSQGGSYGYRSSGGSY 160
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 78.2 bits (191), Expect = 1e-13 Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 E AD KLF+G + ++ + +L + FE G V ++ D+ TGR+RGFGF+ + Sbjct: 84 EQSFSADL-KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSV 142 Query: 396 AVAERVIME--KHMIDGRMVEAKKAVPRDDQQ-----------ALXXXXXXXXXXXXXXR 536 + E + + +DGR + P ++ Sbjct: 143 SEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGS 202 Query: 537 TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 +++VG L+ V + + F + G + + V+YD ++ R +GFGF+TYDS V A+ Sbjct: 203 GNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAI 262 Query: 717 FKTFH--ELNGKMVEVKRA 767 K+ +L+G+ + V A Sbjct: 263 -KSLDGADLDGRQIRVSEA 280 Score = 54.3 bits (129), Expect = 2e-06 Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 ++++G +SW ++ L F + G+VVEA ++ DR +GR++GFGF+ + + I Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264 Query: 417 MEKHMIDGRMVEAKKAVPR 473 ++ +DGR + +A R Sbjct: 265 LDGADLDGRQIRVSEAEAR 283 Score = 51.6 bits (122), Expect = 1e-05 Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 6/101 (5%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 K+FVG L V A FE G + V V+YD T R RGFGF+T S V+ A + Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151 Query: 723 -TFHELNGKMVEVKRAVPKE-----LSPGPSMRSPAGGINY 827 +EL+G+ + V P S GP + G Y Sbjct: 152 FNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGY 192
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 77.8 bits (190), Expect = 1e-13 Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 6/175 (3%) Frame = +3 Query: 210 EPEPEMEADA---GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFI 380 E E +E+++ G+L++G + + +L E F + G V I+ DR T R+RGF F+ Sbjct: 101 EKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFV 160 Query: 381 VFADPAVAERVI--MEKHMIDGRMVEAK-KAVPRDDQQALXXXXXXXXXXXXXXRTKKIF 551 A+ I + + GR V+ VPR ++ + K++ Sbjct: 161 TMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLY 220 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 V L+ +T R F V+YD ++ R RGFGFIT+ S +A++ AL Sbjct: 221 VANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSAL 275 Score = 45.8 bits (107), Expect = 6e-04 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALF 719 +++VG L ++T + F + GT+ +V ++YD T R RGF F+T S E+A + Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174 Query: 720 KTFHELNGKMVEV 758 ++ G+ V+V Sbjct: 175 FDGSQVGGRTVKV 187 Score = 45.1 bits (105), Expect = 0.001 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 KL++ +SW LR+ F + A ++ DR++GR+RGFGFI F+ + Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDT 277 Query: 417 MEKHMIDGR 443 M + ++GR Sbjct: 278 MNEVELEGR 286
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 77.8 bits (190), Expect = 1e-13 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 10/201 (4%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLF+G + E+ +R YFE++G V+E +++D+ TG+ +G F+ +A A+R I Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRA 180 Query: 423 KH---MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFR 593 H + G + +++ + K+FVG L TE + Sbjct: 181 LHNQITLPGGTGPVQVRYADGERERIGTLEF------------KLFVGSLNKQATEKEVE 228 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-----FKTFHELNGKMVEV 758 F QFG + DV +M D Q RG GF+ Y S++ A+ T N ++ V Sbjct: 229 EIFLQFGHVEDVYLMRDEYRQ-SRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLI-V 286 Query: 759 KRAVPKELSPGPS--MRSPAG 815 + A PK PG S M P G Sbjct: 287 RFAEPKRPKPGESREMAPPVG 307 Score = 49.3 bits (116), Expect = 6e-05 Identities = 22/60 (36%), Positives = 35/60 (58%) Frame = +3 Query: 537 TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 T K+FVG + T TE + R YFEQ G + +V ++ D T + +G F+ Y + D+A+ Sbjct: 119 TVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAI 178
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 76.3 bits (186), Expect = 4e-13 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 3/180 (1%) Frame = +3 Query: 237 AGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI 416 A +L++G I + N D LR E++G + A +M D+ +GR+R FGF+ A VI Sbjct: 83 ARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVI 142 Query: 417 --MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADF 590 + I GR ++ + + + K+++G LA TVT Sbjct: 143 EKLNDTEIGGRKIKVN--ITEKPLEGMDIATTQAEDSQFVESPYKVYIGNLAKTVTNELL 200 Query: 591 RTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE-LNGKMVEVKRA 767 + +F + G + V T + GFGF+++ SE+ V+ A+ + L G+ + V +A Sbjct: 201 KDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRVNKA 260
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 76.3 bits (186), Expect = 4e-13 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%) Frame = +3 Query: 231 ADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPAVA 404 +D GKLFIGG++++TNED L + F KYG + E V+++DR T R+RGFGF+ F D A Sbjct: 2 SDEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKD 61 Query: 405 ERVIMEKHMIDGRMVEAKKA 464 + M +DGR + +A Sbjct: 62 AMMAMNGKSVDGRQIRVDQA 81 Score = 63.2 bits (152), Expect = 4e-09 Identities = 56/193 (29%), Positives = 78/193 (40%), Gaps = 1/193 (0%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 K+F+GGL E F ++G I++VVV+ D T+R RGFGF+T+++ D A+ Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMM- 64 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 +NGK V+ G +R G + R GGY Sbjct: 65 ---AMNGKSVD-----------GRQIRVDQAGKSSGERR-----------------GGYR 93 Query: 903 MRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSG 1082 G GGR GG G G + + G GGSS + GR Y Sbjct: 94 GGSSGGRGFFRGGRG---RGGGDRGYGSSRFDNRSGGYGGSSGSRDYYGSGRSQGSYGDR 150 Query: 1083 NSGRY-NSNISYG 1118 + G Y +S SYG Sbjct: 151 SGGSYRDSYDSYG 163
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 75.9 bits (185), Expect = 6e-13 Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 15/290 (5%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +++ + + +D L++ F KYG++ AV+M+D+ +G +R FGF+ F P A + + Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEKM 285 Query: 426 HMID-GRMV----EAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADF 590 + I G V A+K R +++ + +++ L +V + Sbjct: 286 NGISLGEDVLYVGRAQKKSDR-EEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKL 344 Query: 591 RTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAV 770 + F ++G +T VM ++ RGFGF+ Y + + A+ E+NGKM+ K Sbjct: 345 KEMFSEYGNVTSCKVMM-NSQGLSRGFGFVAYSNPEEALLAM----KEMNGKMIGRK--- 396 Query: 771 PKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSG---- 938 P ++ + + + S T PSP+ G+ G +SG Sbjct: 397 PLYVALAQRKEERQAHLQSLFTQIRS---PGTMSPVPSPMSGFHHHPPG--GPMSGPHHP 451 Query: 939 ------GRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINP 1070 G+ PS GYG + F PGM PG G NF RQ P Sbjct: 452 MFIGHNGQGLVPSQPMGYGYQVQFMPGMRPG-AGPPNFMMPFPLQRQTQP 500 Score = 51.6 bits (122), Expect = 1e-05 Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 2/163 (1%) Frame = +3 Query: 240 GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI- 416 G +FI + + L E F +G ++ + D GR++G+GF+ F A+ I Sbjct: 132 GNVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAID 190 Query: 417 -MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFR 593 + +++ + V V R D+ ++V L +T+ + + Sbjct: 191 KLNGMLLNDKQVFVGHFVRRQDR--------ARSESGAVPSFTNVYVKNLPKEITDDELK 242 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 F ++G I+ VVM D + R FGF+ + S +A A+ K Sbjct: 243 KTFGKYGDISSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEK 284
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana (Mouse-ear| cress) Length = 169 Score = 75.5 bits (184), Expect = 7e-13 Identities = 54/162 (33%), Positives = 74/162 (45%), Gaps = 1/162 (0%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 + FVGGLA + D + F QFG + D ++ D + R RGFGF+T+ E A+ A+ + Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66 Query: 723 -TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGY 899 EL+G+++ V A + G R +GG Y + G GYS GGY Sbjct: 67 MNGKELDGRVITVNEAQSRGSGGGGGGRGGSGG-GYRSGGGGGYSGGGGGGYSGGGGGGY 125 Query: 900 GMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGS 1025 R G SGG +GGG G G G GGS Sbjct: 126 ERRSG---GYGSGGGGGGRGYGGG---GRREGGGYGGGDGGS 161 Score = 67.4 bits (163), Expect = 2e-10 Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 + F+GG++W TN++ L+ F ++G+V+++ I+ DR +GR+RGFGF+ F D I E Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66 Query: 423 KH--MIDGRMVEAKKAVPR 473 + +DGR++ +A R Sbjct: 67 MNGKELDGRVITVNEAQSR 85
>Q9BX46:RBM24_HUMAN RNA-binding protein 24 - Homo sapiens (Human)| Length = 236 Score = 74.3 bits (181), Expect = 2e-12 Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+GG+ + T + LR+YFE +GE+ EAV++ DR TG++RG+GF+ AD A AER + Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 423 KH-MIDGRMVEAKKA 464 + +IDGR A Sbjct: 72 PNPIIDGRKANVNLA 86 Score = 59.3 bits (142), Expect = 5e-08 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 KIFVGGL T+A R YFE FG I + VV+ D T + RG+GF+T A ++A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 723 TFHELNGKMVEVKRAV----PKELSPG 791 ++G+ V A P+ + PG Sbjct: 72 PNPIIDGRKANVNLAYLGAKPRIMQPG 98
>Q6P8A7:RBM24_XENTR RNA-binding protein 24 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 226 Score = 73.9 bits (180), Expect = 2e-12 Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+GG+ + T + LR+YFE +G++ EAV++ DR TG++RG+GF+ AD A AER + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 423 KH-MIDGRMVEAKKA 464 + +IDGR A Sbjct: 72 PNPIIDGRKANVNLA 86 Score = 58.2 bits (139), Expect = 1e-07 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 KIFVGGL T++ R YFE FG I + VV+ D T + RG+GF+T A ++A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 723 TFHELNGKMVEVKRAV----PKELSPG 791 ++G+ V A P+ + PG Sbjct: 72 PNPIIDGRKANVNLAYLGAKPRIMQPG 98
>Q5ZMA3:RBM24_CHICK RNA-binding protein 24 - Gallus gallus (Chicken)| Length = 225 Score = 73.9 bits (180), Expect = 2e-12 Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+GG+ + T + LR+YFE +G++ EAV++ DR TG++RG+GF+ AD A AER + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 423 KH-MIDGRMVEAKKA 464 + +IDGR A Sbjct: 72 PNPIIDGRKANVNLA 86 Score = 58.2 bits (139), Expect = 1e-07 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 KIFVGGL T++ R YFE FG I + VV+ D T + RG+GF+T A ++A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 723 TFHELNGKMVEVKRAV----PKELSPG 791 ++G+ V A P+ + PG Sbjct: 72 PNPIIDGRKANVNLAYLGAKPRIMQPG 98
>Q9I8B3:RB24B_XENLA RNA-binding protein 24-B - Xenopus laevis (African clawed frog)| Length = 224 Score = 73.9 bits (180), Expect = 2e-12 Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+GG+ + T + LR+YFE +G++ EAV++ DR TG++RG+GF+ AD A AER + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 423 KH-MIDGRMVEAKKA 464 + +IDGR A Sbjct: 72 PNPIIDGRKANVNLA 86 Score = 58.2 bits (139), Expect = 1e-07 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 KIFVGGL T++ R YFE FG I + VV+ D T + RG+GF+T A ++A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 723 TFHELNGKMVEVKRAV----PKELSPG 791 ++G+ V A P+ + PG Sbjct: 72 PNPIIDGRKANVNLAYLGAKPRIMQPG 98
>Q6GQD3:RB24A_XENLA RNA-binding protein 24-A - Xenopus laevis (African clawed frog)| Length = 225 Score = 73.9 bits (180), Expect = 2e-12 Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+GG+ + T + LR+YFE +G++ EAV++ DR TG++RG+GF+ AD A AER + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 423 KH-MIDGRMVEAKKA 464 + +IDGR A Sbjct: 72 PNPIIDGRKANVNLA 86 Score = 58.2 bits (139), Expect = 1e-07 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 KIFVGGL T++ R YFE FG I + VV+ D T + RG+GF+T A ++A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 723 TFHELNGKMVEVKRAV----PKELSPG 791 ++G+ V A P+ + PG Sbjct: 72 PNPIIDGRKANVNLAYLGAKPRIMQPG 98
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 73.6 bits (179), Expect = 3e-12 Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 21/205 (10%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P D KLF+G + + + L FE+ G V ++ D+ TGR+RGFGF+ + Sbjct: 80 QPRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTK 138 Query: 396 AVAERVIME--KHMIDGRMVEAKKA-VPRDDQQALXXXXXXXXXXXXXXR---------- 536 E + + IDGR + P + + R Sbjct: 139 EEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGAR 198 Query: 537 -------TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSE 695 + +++VG L+ V + + F + G + D V+YD ++ R RGFGF+TY S Sbjct: 199 GGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSS 258 Query: 696 DAVDKALFK-TFHELNGKMVEVKRA 767 V+ A+ +L+G+ + V A Sbjct: 259 KEVNDAIDSLNGVDLDGRSIRVSAA 283 Score = 55.5 bits (132), Expect = 8e-07 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%) Frame = +3 Query: 237 AGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI 416 + ++++G +SW ++ L+E F + G VV+A ++ DR +GR+RGFGF+ ++ I Sbjct: 206 SNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAI 265 Query: 417 --MEKHMIDGRMVEAKKAVPRDDQQ 485 + +DGR + A R +Q Sbjct: 266 DSLNGVDLDGRSIRVSAAEERPRRQ 290 Score = 55.1 bits (131), Expect = 1e-06 Identities = 50/162 (30%), Positives = 67/162 (41%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 K+FVG L +V A FE+ G + V V+YD T R RGFGF+T +++ V+ A Sbjct: 88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAA--- 144 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 + NG ++ RA+ P P+ R NS G G S YG Sbjct: 145 -EQQFNGYEID-GRAIRVNAGPAPA------------KRENSSFGGGRGGNS-----SYG 185 Query: 903 MRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSS 1028 GGR SFGG G G + D +G S Sbjct: 186 -----------GGRDGNSSFGGARG-GRSVDSSNRVYVGNLS 215
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 73.6 bits (179), Expect = 3e-12 Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 2/252 (0%) Frame = +3 Query: 222 EMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 E + +F+G +SW +++ L++ FE G V+ A ++ +R T R+RG+G++ F + + Sbjct: 162 EETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSY 221 Query: 402 AERVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 AE+ I M+ IDGR + + + A + +F+G L+ Sbjct: 222 AEKAIQEMQGKEIDGRPINCDMST---SKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNA 278 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 F + G + V + T++P+GFG++ + + + KAL L G+ ++ Sbjct: 279 DRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKAL----DALQGEYID 334 Query: 756 VKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLS 935 + SP P+ GG ++G+ G G R G Sbjct: 335 NRPVRLDFSSPRPNNDGGRGG---------------SRGFGGRGGGRGGNRGFGGRGGAR 379 Query: 936 GGRSSYPSFGGG 971 GGR + G G Sbjct: 380 GGRGGFRPSGSG 391
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard)| (Brassica hirta) Length = 166 Score = 73.6 bits (179), Expect = 3e-12 Identities = 55/165 (33%), Positives = 73/165 (44%), Gaps = 4/165 (2%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-F 719 + FVGGLA + T F Q+G + D ++ D T R RGFGF+T+ E ++ A+ Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGY 899 +L+G+ + V A + G R GG + +G GY GG Sbjct: 69 MNGQDLDGRSITVNEAQSRGSGGGGGGRGGGGG----------YRSGGGGGYGG---GGG 115 Query: 900 GMRMDARFGLLSGGRSSYPS---FGGGYGIGMNFDPGMNPGIGGS 1025 G R G SGG Y S GGGYG G D G G GGS Sbjct: 116 GYGGGGREGGYSGGGGGYSSRGGGGGGYGGGGRRDGGEGGGYGGS 160 Score = 65.5 bits (158), Expect = 8e-10 Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 + F+GG++W T++ L F +YGEV+++ I+ DR TGR+RGFGF+ F D + I Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 417 MEKHMIDGRMVEAKKAVPR 473 M +DGR + +A R Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>Q9H0Z9:RBM38_HUMAN RNA-binding protein 38 - Homo sapiens (Human)| Length = 216 Score = 73.2 bits (178), Expect = 4e-12 Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+GG+ + T + LR+YFE +G++ EAV++ DR TG++RG+GF+ AD A AER + Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 423 KH-MIDGRMVEAKKA 464 + +IDGR A Sbjct: 72 PNPIIDGRKANVNLA 86 Score = 58.2 bits (139), Expect = 1e-07 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 4/87 (4%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 KIFVGGL T+A R YFE FG I + VV+ D T + RG+GF+T A ++A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 723 TFHELNGKMVEVKRAV----PKELSPG 791 ++G+ V A P+ L G Sbjct: 72 PNPIIDGRKANVNLAYLGAKPRSLQTG 98
>P84586:HNRPG_RAT Heterogeneous nuclear ribonucleoprotein G - Rattus norvegicus (Rat)| Length = 388 Score = 73.2 bits (178), Expect = 4e-12 Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 3/83 (3%) Frame = +3 Query: 225 MEADA-GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 +EAD GKLFIGG++ +TNE L F KYG +VE ++M+DR T ++RGF F+ F PA Sbjct: 2 VEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPAD 61 Query: 402 AERVI--MEKHMIDGRMVEAKKA 464 A+ V M +DG+ ++ ++A Sbjct: 62 AKDVARDMNGKSLDGKAIKVEQA 84 Score = 60.1 bits (144), Expect = 3e-08 Identities = 49/161 (30%), Positives = 70/161 (43%), Gaps = 16/161 (9%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDK 710 R K+F+GGL + E F ++G I ++++M D T + RGF F+T++S DA D Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDV 65 Query: 711 ALFKTFHELNGKMVEVKRAVPKELS-------PGPSMRSPAGGINYVMNRANSFLNGYTQ 869 A L+GK ++V++A P P R P G+ R S G T+ Sbjct: 66 ARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGL-----RGGS---GGTR 117 Query: 870 GYSPSPVGGY--------GMRMDARFGLLSGGRSSYPSFGG 968 G P GGY M + G L R P GG Sbjct: 118 G--PPSRGGYMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGG 156
>Q76LC6:RBM24_DANRE RNA-binding protein 24 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 230 Score = 72.8 bits (177), Expect = 5e-12 Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+GG+ + T + LR+YFE +GE+ EAV++ DR TG++RG+GF+ AD + A+R + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKD 71 Query: 423 KH-MIDGRMVEAKKA 464 + +IDGR A Sbjct: 72 PNPIIDGRKANVNLA 86 Score = 60.8 bits (146), Expect = 2e-08 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 KIFVGGL T++ R YFE FG I + VV+ D T + RG+GF+T A D+A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKD 71 Query: 723 TFHELNGKMVEVKRAV----PKELSPG 791 ++G+ V A P+ + PG Sbjct: 72 PNPIIDGRKANVNLAYLGAKPRVMQPG 98
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 629 Score = 72.8 bits (177), Expect = 5e-12 Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 4/176 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 ++I D ++ RLRE F +G + +M D TGR+RGFGF+ + + A++ + E Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEM 251 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEADFR 593 + ++GRM+ +A R ++Q R + ++V L + + R Sbjct: 252 NGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLR 311 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 F +GTIT VM + +GFGF+ + S + KA+ E+NG++V K Sbjct: 312 KEFSPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAV----TEMNGRIVSTK 361 Score = 55.1 bits (131), Expect = 1e-06 Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 2/175 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D E L E F G ++ + RD AT R+ G+ +I F PA AER + M Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I GR + + RD +F+ L ++ Sbjct: 73 NFEVIKGRPIRIMWS-QRDP-------------GLRKSGVGNVFIKNLDESIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 F FG I V+ D + R G+GF+ +++++A ++A+ +NG ++ ++ Sbjct: 119 FSAFGNILSCKVVCDEHGSR--GYGFVHFETQEAANRAI----QTMNGMLLNDRK 167 Score = 33.5 bits (75), Expect = 3.2 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 1/105 (0%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-FK 722 ++VG L VTEA F G I + V D T+R G+ +I + ++AL Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLN 857 F + G+ + + + P +R G ++ N S N Sbjct: 73 NFEVIKGRPIRIMWS-----QRDPGLRKSGVGNVFIKNLDESIDN 112
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 72.4 bits (176), Expect = 6e-12 Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 9/253 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADAGK---LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A + ++I D +++RL+E F K+G + +M D Sbjct: 166 RKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD 225 Query: 345 RATGRARGFGFIVFADPAVAERVIMEKH--MIDGRMVEAKKAVPRDDQQALXXXXXXXXX 518 + G+++GFGF+ F A++ + E + ++G+ + +A + ++Q Sbjct: 226 ES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + ++V L + + R F FGTIT VM + R +GFGF+ + S Sbjct: 285 QDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRAN--SFLNGYT 866 + KA+ E+NG++V K + L+ R Y+ A+ + N Sbjct: 343 PEEATKAV----TEMNGRIVATK-PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVI 397 Query: 867 QGYSPSPVGGYGM 905 Y P+P GY M Sbjct: 398 NPYQPAPPSGYFM 410 Score = 57.4 bits (137), Expect = 2e-07 Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 2/212 (0%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D E L E F G ++ + RD T R+ G+ ++ F PA AER + M Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I G+ V + RD IF+ L ++ Sbjct: 73 NFDVIKGKPVRIMWS-QRDPS-------------LRKSGVGNIFIKNLDKSIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG I V+ D N +G+GF+ +++++A ++A+ K +NG ++ ++ Sbjct: 119 FSAFGNILSCKVVCDENGS--KGYGFVHFETQEAAERAIEK----MNGMLLNDRKVFVGR 172 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 + G RA F N Y + + Sbjct: 173 FKSRKEREAELGA------RAKEFTNVYIKNF 198 Score = 55.5 bits (132), Expect = 8e-07 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 3/186 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +FI + + L + F +G ++ ++ D ++G+GF+ F AE Sbjct: 95 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAE 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 R I M +++ R V + R +++A +++ + + Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSRKEREA--------ELGARAKEFTNVYIKNFGEDMDD 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEV 758 + F +FG V VM D + + +GFGF++++ + KA+ + ELNGK + V Sbjct: 205 ERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263 Query: 759 KRAVPK 776 RA K Sbjct: 264 GRAQKK 269
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 72.0 bits (175), Expect = 8e-12 Identities = 53/172 (30%), Positives = 66/172 (38%), Gaps = 1/172 (0%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 K+FVG L+ V A FE G + V V+YD T R RGFGF+T + V+ A + Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159 Query: 723 -TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGY 899 +E G+ + V P R P G Y R GY GGY Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGPRSG-GYGSERGG--------GYGSERGGGY 210 Query: 900 GMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYG 1055 G +G GG GGGYG G G G S N + G Sbjct: 211 GSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGSGSGSGSGNRLYVG 262 Score = 55.5 bits (132), Expect = 8e-07 Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 +L++G +SW ++ L F + G+VVEA ++ DR +GR++GFGF+ + ++ I Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317 Query: 417 MEKHMIDGRMVEAKKAVPR 473 + +DGR + +A R Sbjct: 318 LNGADLDGRQIRVSEAEAR 336 Score = 48.9 bits (115), Expect = 7e-05 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLF+G +S++ + +L + FE G V ++ D+ TGR+RGFGF+ + A E + Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159 Query: 423 --KHMIDGRMVEAKKAVP 470 + +GR + P Sbjct: 160 FNGYEFEGRPLRVNAGPP 177 Score = 46.6 bits (109), Expect = 4e-04 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 +++VG L+ V + F + G + + V+YD ++ R +GFGF+T S V KA+ Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317 Query: 723 -TFHELNGKMVEVKRA 767 +L+G+ + V A Sbjct: 318 LNGADLDGRQIRVSEA 333 Score = 33.5 bits (75), Expect = 3.2 Identities = 25/86 (29%), Positives = 36/86 (41%) Frame = +3 Query: 1356 ENNFNLSPGAYGRNTGSGGVNASLNQSSNGYGRNFGDSSAAGGGSIYGDTTWRSGSELDG 1535 E +F+ P + G + GG S G R G S GGG YG RSG G Sbjct: 182 EESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGG--YGSQ--RSGGGYGG 237 Query: 1536 TSPFGYGLGNAASDVTAKSSAGYMGH 1613 + YG G+ + + + Y+G+ Sbjct: 238 SQRSSYGSGSGSGSGSGSGNRLYVGN 263
>Q62176:RBM38_MOUSE RNA-binding protein 38 - Mus musculus (Mouse)| Length = 237 Score = 72.0 bits (175), Expect = 8e-12 Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+GG+ + T + LR+YFE +G++ EAV++ DR TG++RG+GF+ AD A A+R + Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 423 KH-MIDGRMVEAKKA 464 + +IDGR A Sbjct: 93 PNPIIDGRKANVNLA 107 Score = 59.7 bits (143), Expect = 4e-08 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 4/87 (4%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 KIFVGGL T+A R YFE FG I + VV+ D T + RG+GF+T A D+A Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 723 TFHELNGKMVEVKRAV----PKELSPG 791 ++G+ V A P+ L G Sbjct: 93 PNPIIDGRKANVNLAYLGAKPRSLQTG 119
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 72.0 bits (175), Expect = 8e-12 Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 9/253 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADAGK---LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A + ++I D +++RL+E F K+G + +M D Sbjct: 166 RKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD 225 Query: 345 RATGRARGFGFIVFADPAVAERVIMEKH--MIDGRMVEAKKAVPRDDQQALXXXXXXXXX 518 + G+++GFGF+ F A++ + E + ++G+ + +A + ++Q Sbjct: 226 ES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + ++V L + + R F FGTIT VM + R +GFGF+ + S Sbjct: 285 QDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRAN--SFLNGYT 866 + KA+ E+NG++V K + L+ R Y+ A+ + N Sbjct: 343 PEEATKAV----TEMNGRIVATK-PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVI 397 Query: 867 QGYSPSPVGGYGM 905 Y P+P GY M Sbjct: 398 NPYQPAPPSGYFM 410 Score = 57.4 bits (137), Expect = 2e-07 Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 2/212 (0%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D E L E F G ++ + RD T R+ G+ ++ F PA AER + M Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I G+ V + RD IF+ L ++ Sbjct: 73 NFDVIKGKPVRIMWS-QRDPS-------------LRKSGVGNIFIKNLDKSIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG I V+ D N +G+GF+ +++++A ++A+ K +NG ++ ++ Sbjct: 119 FSAFGNILSCKVVCDENGS--KGYGFVHFETQEAAERAIEK----MNGMLLNDRKVFVGR 172 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 + G RA F N Y + + Sbjct: 173 FKSQKEREAELGA------RAKEFTNVYIKNF 198 Score = 53.9 bits (128), Expect = 2e-06 Identities = 41/186 (22%), Positives = 82/186 (44%), Gaps = 3/186 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +FI + + L + F +G ++ ++ D ++G+GF+ F AE Sbjct: 95 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAE 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 R I M +++ R V + + +++A +++ + + Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSQKEREA--------ELGARAKEFTNVYIKNFGEDMDD 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEV 758 + F +FG V VM D + + +GFGF++++ + KA+ + ELNGK + V Sbjct: 205 ERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263 Query: 759 KRAVPK 776 RA K Sbjct: 264 GRAQKK 269
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 72.0 bits (175), Expect = 8e-12 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%) Frame = +3 Query: 225 MEADA-GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 +EAD GKLFIGG++ +TNE L F KYG +VE ++M+DR T ++RGF F+ F PA Sbjct: 2 VEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPAD 61 Query: 402 AERVI--MEKHMIDGRMVEAKKA 464 A+ M +DG+ ++ ++A Sbjct: 62 AKDAARDMNGKSLDGKAIKVEQA 84 Score = 62.0 bits (149), Expect = 8e-09 Identities = 51/160 (31%), Positives = 72/160 (45%), Gaps = 15/160 (9%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDK 710 R K+F+GGL + E F ++G I +V++M D T + RGF F+T++S DA D Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65 Query: 711 ALFKTFHELNGKMVEVKRAVPKELS-------PGPSMRSPAGGINYVMNRANSFLNGYTQ 869 A L+GK ++V++A P P R P G+ R +G T+ Sbjct: 66 ARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGL-----RGGRGGSGGTR 120 Query: 870 GYSPS-----PVGGYGM--RMDARFGLLSGGRSSYPSFGG 968 G PS GGY M M + G L R P GG Sbjct: 121 G-PPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGG 159
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 71.6 bits (174), Expect = 1e-11 Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Frame = +3 Query: 225 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVA 404 M ++ GKLF+GG++++T+E L ++F +G + E V+++DR T R+RGFGFI F +P A Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60 Query: 405 ERVI--MEKHMIDGRMVEAKKA 464 + M +DGR + A Sbjct: 61 SDAMRAMNGESLDGRQIRVDHA 82 Score = 69.7 bits (169), Expect = 4e-11 Identities = 53/147 (36%), Positives = 66/147 (44%), Gaps = 4/147 (2%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY-DSEDAVDKALF 719 K+FVGGL E +F FG I++VVV+ D TQR RGFGFIT+ + E A D Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANS---FLNGYTQGYSPSPV 890 L+G+ + V A G S R GG R+ S GY G S Sbjct: 67 MNGESLDGRQIRVDHA-------GKSARGSRGGAFGGRGRSYSRGGGDQGYGSGRYDSRP 119 Query: 891 GGYGMRMDARFGLLSGGRSSYPSFGGG 971 GGYG R SG + Y + GG Sbjct: 120 GGYGYGY-GRSRDYSGSQGGYDRYSGG 145
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 71.6 bits (174), Expect = 1e-11 Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 3/83 (3%) Frame = +3 Query: 225 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP--- 395 M ++ GKLF+GG++++T+E L ++F +G + E V+++DR T R+RGFGFI F +P Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60 Query: 396 AVAERVIMEKHMIDGRMVEAKKA 464 +VA R M +DGR + A Sbjct: 61 SVAMRA-MNGESLDGRQIRVDHA 82 Score = 66.6 bits (161), Expect = 3e-10 Identities = 50/150 (33%), Positives = 65/150 (43%), Gaps = 7/150 (4%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 K+FVGGL E +F FG I++VVV+ D TQR RGFGFIT+ + + A+ Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 723 TFHE-LNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFL-----NGYTQG-YSP 881 E L+G+ + V A G S R GG R S+ GY G Y Sbjct: 67 MNGESLDGRQIRVDHA-------GKSARGTRGGGFGAHGRGRSYSRGGGDQGYGSGRYYD 119 Query: 882 SPVGGYGMRMDARFGLLSGGRSSYPSFGGG 971 S GGYG + Y + GG Sbjct: 120 SRPGGYGYGYGRSRDYNGRNQGGYDRYSGG 149
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 71.2 bits (173), Expect = 1e-11 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 21/205 (10%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 +P D KLF+G + + + L FE+ G V ++ D+ +GR+RGFGF+ + Sbjct: 81 QPRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTK 139 Query: 396 AVAERVIME--KHMIDGRMVEAKKA-VPRDDQQALXXXXXXXXXXXXXXR---------- 536 E + + IDGR + P + + R Sbjct: 140 EEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGAR 199 Query: 537 -------TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSE 695 + +++VG L+ V + + F + G + D V+YD ++ R RGFGF+TY S Sbjct: 200 GGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSA 259 Query: 696 DAVDKALFK-TFHELNGKMVEVKRA 767 V+ A+ +L+G+ + V A Sbjct: 260 KEVNDAIDSLNGIDLDGRSIRVSAA 284 Score = 55.8 bits (133), Expect = 6e-07 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 2/85 (2%) Frame = +3 Query: 237 AGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI 416 + ++++G +SW ++ L+E F + G VV+A ++ DR +GR+RGFGF+ ++ I Sbjct: 207 SNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAI 266 Query: 417 MEKHMI--DGRMVEAKKAVPRDDQQ 485 + I DGR + A R +Q Sbjct: 267 DSLNGIDLDGRSIRVSAAEERPRRQ 291 Score = 53.5 bits (127), Expect = 3e-06 Identities = 49/162 (30%), Positives = 67/162 (41%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 K+FVG L +V A FE+ G + V V+YD + R RGFGF+T +++ V+ A Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAA--- 145 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 + NG ++ RA+ P P+ R NS G G S YG Sbjct: 146 -EQQFNGYEID-GRAIRVNAGPAPA------------KRENSSFGGGRGGNS-----SYG 186 Query: 903 MRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSS 1028 GGR SFGG G G + D +G S Sbjct: 187 -----------GGRDGNSSFGGARG-GRSVDSSNRVYVGNLS 216
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 71.2 bits (173), Expect = 1e-11 Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 9/253 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADAGK---LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A + ++I D +++RL++ F K+G + +M D Sbjct: 166 RKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225 Query: 345 RATGRARGFGFIVFADPAVAERVIMEKH--MIDGRMVEAKKAVPRDDQQALXXXXXXXXX 518 + G+++GFGF+ F A++ + E + ++G+ + +A + ++Q Sbjct: 226 ES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + ++V L + + R F FGTIT VM + R +GFGF+ + S Sbjct: 285 QDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRAN--SFLNGYT 866 + KA+ E+NG++V K + L+ R Y+ A+ + N Sbjct: 343 PEEATKAV----TEMNGRIVATK-PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVI 397 Query: 867 QGYSPSPVGGYGM 905 Y P+P GY M Sbjct: 398 NPYQPAPPSGYFM 410 Score = 57.4 bits (137), Expect = 2e-07 Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 2/212 (0%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D E L E F G ++ + RD T R+ G+ ++ F PA AER + M Sbjct: 13 LYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I G+ V + RD IF+ L ++ Sbjct: 73 NFDVIKGKPVRIMWS-QRDPS-------------LRKSGVGNIFIKNLDKSIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG I V+ D N +G+GF+ +++++A ++A+ K +NG ++ ++ Sbjct: 119 FSAFGNILSCKVVCDENGS--KGYGFVHFETQEAAERAIEK----MNGMLLNDRKVFVGR 172 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 + G RA F N Y + + Sbjct: 173 FKSRKEREAELGA------RAKEFTNVYIKNF 198 Score = 55.5 bits (132), Expect = 8e-07 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 3/186 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +FI + + L + F +G ++ ++ D ++G+GF+ F AE Sbjct: 95 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAE 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 R I M +++ R V + R +++A +++ + + Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSRKEREA--------ELGARAKEFTNVYIKNFGEDMDD 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEV 758 + F +FG V VM D + + +GFGF++++ + KA+ + ELNGK + V Sbjct: 205 ERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263 Query: 759 KRAVPK 776 RA K Sbjct: 264 GRAQKK 269
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 71.2 bits (173), Expect = 1e-11 Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 9/253 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADAGK---LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A + ++I D +++RL++ F K+G + +M D Sbjct: 166 RKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225 Query: 345 RATGRARGFGFIVFADPAVAERVIMEKH--MIDGRMVEAKKAVPRDDQQALXXXXXXXXX 518 + G+++GFGF+ F A++ + E + ++G+ + +A + ++Q Sbjct: 226 ES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + ++V L + + R F FGTIT VM + R +GFGF+ + S Sbjct: 285 QDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRAN--SFLNGYT 866 + KA+ E+NG++V K + L+ R Y+ A+ + N Sbjct: 343 PEEATKAV----TEMNGRIVATK-PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVI 397 Query: 867 QGYSPSPVGGYGM 905 Y P+P GY M Sbjct: 398 NPYQPAPPSGYFM 410 Score = 57.4 bits (137), Expect = 2e-07 Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 2/212 (0%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D E L E F G ++ + RD T R+ G+ ++ F PA AER + M Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I G+ V + RD IF+ L ++ Sbjct: 73 NFDVIKGKPVRIMWS-QRDPS-------------LRKSGVGNIFIKNLDKSIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG I V+ D N +G+GF+ +++++A ++A+ K +NG ++ ++ Sbjct: 119 FSAFGNILSCKVVCDENGS--KGYGFVHFETQEAAERAIEK----MNGMLLNDRKVFVGR 172 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 + G RA F N Y + + Sbjct: 173 FKSRKEREAELGA------RAKEFTNVYIKNF 198 Score = 55.5 bits (132), Expect = 8e-07 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 3/186 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +FI + + L + F +G ++ ++ D ++G+GF+ F AE Sbjct: 95 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAE 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 R I M +++ R V + R +++A +++ + + Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSRKEREA--------ELGARAKEFTNVYIKNFGEDMDD 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEV 758 + F +FG V VM D + + +GFGF++++ + KA+ + ELNGK + V Sbjct: 205 ERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263 Query: 759 KRAVPK 776 RA K Sbjct: 264 GRAQKK 269
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 71.2 bits (173), Expect = 1e-11 Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 9/253 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADAGK---LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A + ++I D +++RL++ F K+G + +M D Sbjct: 166 RKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225 Query: 345 RATGRARGFGFIVFADPAVAERVIMEKH--MIDGRMVEAKKAVPRDDQQALXXXXXXXXX 518 + G+++GFGF+ F A++ + E + ++G+ + +A + ++Q Sbjct: 226 ES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + ++V L + + R F FGTIT VM + R +GFGF+ + S Sbjct: 285 QDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRAN--SFLNGYT 866 + KA+ E+NG++V K + L+ R Y+ A+ + N Sbjct: 343 PEEATKAV----TEMNGRIVATK-PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVI 397 Query: 867 QGYSPSPVGGYGM 905 Y P+P GY M Sbjct: 398 NPYQPAPPSGYFM 410 Score = 57.4 bits (137), Expect = 2e-07 Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 2/212 (0%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D E L E F G ++ + RD T R+ G+ ++ F PA AER + M Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I G+ V + RD IF+ L ++ Sbjct: 73 NFDVIKGKPVRIMWS-QRDPS-------------LRKSGVGNIFIKNLDKSIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG I V+ D N +G+GF+ +++++A ++A+ K +NG ++ ++ Sbjct: 119 FSAFGNILSCKVVCDENGS--KGYGFVHFETQEAAERAIEK----MNGMLLNDRKVFVGR 172 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 + G RA F N Y + + Sbjct: 173 FKSRKEREAELGA------RAKEFTNVYIKNF 198 Score = 55.5 bits (132), Expect = 8e-07 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 3/186 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +FI + + L + F +G ++ ++ D ++G+GF+ F AE Sbjct: 95 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAE 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 R I M +++ R V + R +++A +++ + + Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSRKEREA--------ELGARAKEFTNVYIKNFGEDMDD 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEV 758 + F +FG V VM D + + +GFGF++++ + KA+ + ELNGK + V Sbjct: 205 ERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263 Query: 759 KRAVPK 776 RA K Sbjct: 264 GRAQKK 269
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 71.2 bits (173), Expect = 1e-11 Identities = 56/170 (32%), Positives = 71/170 (41%), Gaps = 6/170 (3%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-F 719 + FVGGLA + F QFG ITD ++ D T R RGFGF+T+ E ++ A+ Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGY 899 EL+G+ + V A + G R GG GY G GGY Sbjct: 67 MNGQELDGRNITVNEAQSRGSGGGGGRREGGGG-------------GYGGG------GGY 107 Query: 900 GMRMDARFGLLSGGR-----SSYPSFGGGYGIGMNFDPGMNPGIGGSSNF 1034 G R + G GGR Y GGGYG G G GG S + Sbjct: 108 GGRREGGGGGGYGGRREGGGGGYGGGGGGYGGRREGGDGGYGGGGGGSRW 157 Score = 66.2 bits (160), Expect = 4e-10 Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 + F+GG++W TN++ L + F ++G++ ++ I+ DR TGR+RGFGF+ F D I Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66 Query: 417 MEKHMIDGRMVEAKKAVPR 473 M +DGR + +A R Sbjct: 67 MNGQELDGRNITVNEAQSR 85
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 71.2 bits (173), Expect = 1e-11 Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 4/176 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 ++I D ++ RL+E F +G + +M D + GR+RGFGF+ + + A++ + E Sbjct: 193 VYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNS-GRSRGFGFVNYGNHEEAQKAVTEM 251 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEADFR 593 + ++GRMV +A R ++Q R + ++V L + + R Sbjct: 252 NGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLR 311 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 F +GTIT VM + +GFGF+ + S + KA+ E+NG++V K Sbjct: 312 KEFSPYGTITSTKVMTEGG--HSKGFGFVCFSSPEEATKAV----TEMNGRIVSTK 361 Score = 56.6 bits (135), Expect = 3e-07 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 3/183 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +FI + + L + F +G+++ ++ D +RG+GF+ F A Sbjct: 95 KSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAAN 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 R I M +++ R V R +++ +++ + + Sbjct: 153 RAIQTMNGMLLNDRKVFVGHFKSRREREL--------EYGAKVMEFTNVYIKNFGEDMDD 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEV 758 + F FG V VM D N+ R RGFGF+ Y + + KA+ + E+NG+MV V Sbjct: 205 KRLKEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYV 263 Query: 759 KRA 767 RA Sbjct: 264 GRA 266 Score = 33.5 bits (75), Expect = 3.2 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 1/105 (0%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-FK 722 +++G L VTEA F G I + V D T+R G+ +I + ++AL Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLN 857 F + G+ + + + P +R G ++ N +S N Sbjct: 73 NFEVIKGRPIRIMWS-----QRDPGLRKSGVGNVFIKNLDDSIDN 112
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White mustard)| (Brassica hirta) Length = 169 Score = 70.9 bits (172), Expect = 2e-11 Identities = 54/161 (33%), Positives = 69/161 (42%), Gaps = 1/161 (0%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-F 719 + FVGGLA E T F QFG + D ++ D T R RGFGF+T+ E ++ A+ Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGY 899 +L+G+ + V A + G R GG R G GY G Sbjct: 69 MNGQDLDGRSITVNEAQSRGSGAGGGGRGGGGGY-----RGGGGYGGGGGGY------GG 117 Query: 900 GMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGG 1022 G R + GG SS GGGYG G D G G GG Sbjct: 118 GRREGGGYSGGGGGYSSRGGGGGGYGGGGRRDGG---GYGG 155 Score = 65.1 bits (157), Expect = 1e-09 Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 + F+GG++W T+E L F ++GE+V++ I+ DR TGR+RGFGF+ F D + I Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 417 MEKHMIDGRMVEAKKAVPR 473 M +DGR + +A R Sbjct: 69 MNGQDLDGRSITVNEAQSR 87 Score = 33.1 bits (74), Expect = 4.1 Identities = 21/61 (34%), Positives = 22/61 (36%) Frame = +3 Query: 1380 GAYGRNTGSGGVNASLNQSSNGYGRNFGDSSAAGGGSIYGDTTWRSGSELDGTSPFGYGL 1559 G G G GG + G G SS GGG YG R G G GYG Sbjct: 104 GGGGYGGGGGGYGGGRREGGGYSGGGGGYSSRGGGGGGYGGGGRRDGGGYGGGEGGGYGG 163 Query: 1560 G 1562 G Sbjct: 164 G 164
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 70.9 bits (172), Expect = 2e-11 Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 32/247 (12%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 ++I D ++ RLRE F +G + +M D + GR+RGFGF+ + + A++ + E Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDS-GRSRGFGFVNYGNHEEAQKAVSEM 251 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEADFR 593 + ++GRM+ +A R ++Q+ R + ++V L + + R Sbjct: 252 NGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLR 311 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK---- 761 F +GTIT VM + +GFGF+ + S + KA+ E+NG++V K Sbjct: 312 KEFLPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAV----TEMNGRIVSTKPLYV 365 Query: 762 -------------------RAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQG---- 872 R PGP + S AN FL+ Q Sbjct: 366 ALAQRKEERKAILTNQYMQRLATMRAMPGPLLGS-------FQQPANYFLSAMPQPPNRT 418 Query: 873 -YSPSPV 890 YSP+PV Sbjct: 419 FYSPNPV 425 Score = 52.4 bits (124), Expect = 7e-06 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 2/175 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L+IG + D E L E F G ++ + RD AT R+ + +I F PA AER + M Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I GR + + RD +F+ L ++ Sbjct: 73 NFEVIKGRPIRIMWS-QRDP-------------GLRKSGVGNVFIKNLDESIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 F FG I V+ D + R G+GF+ +++ +A ++A+ +NG ++ ++ Sbjct: 119 FSAFGNILSCKVVCDEHGSR--GYGFVHFETHEAANRAI----QTMNGMLLNDRK 167
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 70.1 bits (170), Expect = 3e-11 Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 7/203 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADAGK---LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A + ++I + +++ L+E F ++G+ + +MRD Sbjct: 166 RKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD 225 Query: 345 RATGRARGFGFIVFADPAVAERVIMEKH--MIDGRMVEAKKAVPRDDQQALXXXXXXXXX 518 G+++GFGF+ + A + + E + I G+++ +A + ++QA Sbjct: 226 -PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + +++ L T+ + R F FG+IT VM + R +GFGF+ + S Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVK 761 + KA+ E+NG++V K Sbjct: 343 PEEATKAV----TEMNGRIVGSK 361 Score = 55.5 bits (132), Expect = 8e-07 Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 3/186 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +FI + + L + F +G ++ ++ D ++G+ F+ F A+ Sbjct: 95 KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAAD 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 + I M +++ R V + R +++A +++ V + Sbjct: 153 KAIEKMNGMLLNDRKVFVGRFKSRKEREA--------ELGAKAKEFTNVYIKNFGEEVDD 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEV 758 + F QFG V VM D N + +GFGF++Y+ + +KA+ + E++GK++ V Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFV 263 Query: 759 KRAVPK 776 RA K Sbjct: 264 GRAQKK 269 Score = 37.0 bits (84), Expect = 0.29 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 1/105 (0%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-FK 722 ++VG L S VTEA F G + + V D T+R G+ ++ + ++AL Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLN 857 F + GK + + + PS+R G ++ N S N Sbjct: 73 NFDVIKGKPIRIMWS-----QRDPSLRKSGVGNVFIKNLDKSIDN 112
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 70.1 bits (170), Expect = 3e-11 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 3/83 (3%) Frame = +3 Query: 225 MEADA-GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 +EAD GKLFIGG++ +TNE L F KYG +VE ++M+DR T ++RGF F+ PA Sbjct: 2 VEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPAD 61 Query: 402 AERVI--MEKHMIDGRMVEAKKA 464 A+ M +DG+ ++ ++A Sbjct: 62 AKDAARDMNGKSLDGKAIKVEQA 84 Score = 59.7 bits (143), Expect = 4e-08 Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 17/162 (10%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDK 710 R K+F+GGL + E F ++G I ++++M D T + RGF F+T +S DA D Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDA 65 Query: 711 ALFKTFHELNGKMVEVKRAV--------------PKELSPGPSMRSPAGGINYVMNRANS 848 A L+GK ++V++A P+ P +R +GG R Sbjct: 66 ARDMNGKSLDGKAIKVEQATKPFFESGRRGPPPPPRSRGPPRGLRGGSGG-----TRGPP 120 Query: 849 FLNGYTQGYSPSPVGGYGM--RMDARFGLLSGGRSSYPSFGG 968 GY GGY M M + G L R P GG Sbjct: 121 SRGGYMDD------GGYSMNFNMSSSRGPLPVKRGPPPRSGG 156
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 69.7 bits (169), Expect = 4e-11 Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 7/203 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADAGK---LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A + ++I D +++RL++ F K+G + +M D Sbjct: 166 RKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225 Query: 345 RATGRARGFGFIVFADPAVAERVIMEKH--MIDGRMVEAKKAVPRDDQQALXXXXXXXXX 518 + G+++GFGF+ F A++ + E + ++G+ + +A + ++Q Sbjct: 226 ES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + ++V L + + R F FGTIT VM + R +GFGF+ + S Sbjct: 285 QDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVK 761 + KA+ E+NG++V K Sbjct: 343 PEEATKAV----TEMNGRIVATK 361 Score = 55.8 bits (133), Expect = 6e-07 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 3/186 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +F+ + N L + +G ++ ++ D ++G+GF+ F AE Sbjct: 95 KSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAE 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 R I M +++GR V + R +++A +++ + + Sbjct: 153 RAIKKMNGMLLNGRKVFVGQFKSRKEREA--------ELGARAKEFPNVYIKNFGEDMDD 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEV 758 + F +FG V VM D + + +GFGF++++ + KA+ + ELNGK + V Sbjct: 205 ERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263 Query: 759 KRAVPK 776 RA K Sbjct: 264 GRAQKK 269 Score = 32.0 bits (71), Expect = 9.2 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 4/111 (3%) Frame = +3 Query: 537 TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFI----TYDSEDAV 704 T ++VG L VTEA F G I + + D T + ++ T D+E A+ Sbjct: 10 TASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHAL 69 Query: 705 DKALFKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLN 857 D F + GK V + + PS+R G +V N S N Sbjct: 70 DT---MNFDVIKGKPVRIMWS-----QRDPSLRKSGVGNIFVKNLDKSINN 112
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 69.7 bits (169), Expect = 4e-11 Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 4/267 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +++ + + ED LR+ F K+G + AV+MRD+ +G +R FGF+ F A + + Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEKM 289 Query: 426 HMI----DGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFR 593 + I D V + +++ + +++ L +V + + Sbjct: 290 NGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLK 349 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVP 773 F ++G +T VM + RGFGF+ Y + + +AL E+NGKM+ K Sbjct: 350 EMFSEYGNVTSSKVMLNPQGM-SRGFGFVAYSNPEEALRAL----SEMNGKMIGRKPLYI 404 Query: 774 KELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSY 953 R+ + + RA ++G+ P GG + G S Sbjct: 405 ALAQRKEDRRAHLQAL-FSQIRAPGPMSGFHH-----PPGGPMPGPPQHMYVGQNGASMV 458 Query: 954 PSFGGGYGIGMNFDPGMNPGIGGSSNF 1034 PS GYG F PGM PG G NF Sbjct: 459 PSQPIGYGFQPQFMPGMRPG-SGPGNF 484 Score = 53.5 bits (127), Expect = 3e-06 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 2/163 (1%) Frame = +3 Query: 240 GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI- 416 G +FI + + L E F +G ++ + D TGR++G+GF+ F A+ I Sbjct: 136 GNIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAID 194 Query: 417 -MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFR 593 + +++ + V + R ++ R ++V L + E + R Sbjct: 195 KLNGMLMNDKQVFVGHFIRRQERAR--------DENTPTPRFTNVYVKNLPKEIGEDELR 246 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 F +FG I+ VVM D + R FGF+ ++ +A A+ K Sbjct: 247 KTFGKFGVISSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEK 288
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 69.7 bits (169), Expect = 4e-11 Identities = 59/193 (30%), Positives = 76/193 (39%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 + FVGGLA +A+ F QFG + D ++ D T R RGFGF+T+ E ++ A+ Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAI-- 64 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 E+NGK ++ G +N A S G G GGYG Sbjct: 65 --DEMNGKELD--------------------GRTITVNEAQSRGGG---GGGGRGGGGYG 99 Query: 903 MRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSG 1082 R +G GG GGGYG G G G GG GR+ Y G Sbjct: 100 GRGGGGYGGGGGGYGDRRG-GGGYGSGGGGRGGGGYGSGGGGYGGGG---GRRDGGGYGG 155 Query: 1083 NSGRYNSNISYGG 1121 G Y GG Sbjct: 156 GDGGYGGGSGGGG 168 Score = 65.1 bits (157), Expect = 1e-09 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 + F+GG++W T + L F ++GEV+++ I+ DR TGR+RGFGF+ F D + I Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66 Query: 417 MEKHMIDGRMVEAKKAVPR 473 M +DGR + +A R Sbjct: 67 MNGKELDGRTITVNEAQSR 85
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 69.3 bits (168), Expect = 5e-11 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 7/203 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADAGK---LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A + ++I D N++RL+E F KYG + +M D Sbjct: 166 RKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD 225 Query: 345 RATGRARGFGFIVFADPAVAERVIMEKHMID--GRMVEAKKAVPRDDQQALXXXXXXXXX 518 G+++GFGF+ F A++ + E + D G+ + +A + ++Q Sbjct: 226 D-NGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + ++V L + + R F FGTIT VM + R +GFGF+ + S Sbjct: 285 QDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGG--RSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVK 761 + KA+ E+NG++V K Sbjct: 343 PEEATKAV----TEMNGRIVATK 361 Score = 59.3 bits (142), Expect = 5e-08 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 2/212 (0%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D E L E F G ++ + RD T R+ G+ ++ F PA AER + M Sbjct: 13 LYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I GR V + RD IF+ L ++ Sbjct: 73 NFDVIKGRPVRIMWS-QRDPS-------------LRKSGVGNIFIKNLDKSIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG I V+ D N +G+GF+ +++++A ++A+ K +NG ++ ++ Sbjct: 119 FSAFGNILSCKVVCDENGS--KGYGFVHFETQEAAERAIDK----MNGMLLNDRKVFVGR 172 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 + G RA F N Y + + Sbjct: 173 FKSRKEREAELGA------RAKEFTNVYIKNF 198 Score = 52.8 bits (125), Expect = 5e-06 Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 3/186 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +FI + + L + F +G ++ ++ D ++G+GF+ F AE Sbjct: 95 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAE 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 R I M +++ R V + R +++A +++ + + Sbjct: 153 RAIDKMNGMLLNDRKVFVGRFKSRKEREA--------ELGARAKEFTNVYIKNFGDDMND 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEV 758 + F ++G V VM D N + +GFGF++++ + KA+ + ++NGK + V Sbjct: 205 ERLKEMFGKYGPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFV 263 Query: 759 KRAVPK 776 RA K Sbjct: 264 GRAQKK 269
>Q4R813:HNRGT_MACFA Testis-specific heterogeneous nuclear ribonucleoprotein G-T -| Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 394 Score = 69.3 bits (168), Expect = 5e-11 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 3/83 (3%) Frame = +3 Query: 225 MEADA-GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 +EAD GKLFIGG++ +T+E L F KYG +VE ++M+DR T ++RGF F+ F PA Sbjct: 2 VEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPAN 61 Query: 402 AERVI--MEKHMIDGRMVEAKKA 464 A+ M +DG+ ++ +A Sbjct: 62 AKAAARDMNGKSLDGKAIKVAQA 84 Score = 51.6 bits (122), Expect = 1e-05 Identities = 45/160 (28%), Positives = 66/160 (41%), Gaps = 1/160 (0%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 713 R K+F+GGL E F ++G I +V++M D T + RGF F+T++S A Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAA 65 Query: 714 LFKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRAN-SFLNGYTQGYSPSPV 890 ++NGK ++ K A+ + P+ S G +R FL G G Sbjct: 66 A----RDMNGKSLDGK-AIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGG------ 114 Query: 891 GGYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNP 1010 GG R +R G P GGY + P P Sbjct: 115 GGGPRRSPSRGG---------PDDDGGYAGDFDLRPSRAP 145
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 69.3 bits (168), Expect = 5e-11 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 3/83 (3%) Frame = +3 Query: 225 MEADA-GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 +EAD GKLFIGG++ +T+E L F KYG +VE ++M+DR T ++RGF F+ F PA Sbjct: 2 VEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPAD 61 Query: 402 AERVI--MEKHMIDGRMVEAKKA 464 A+ M +DG+ ++ +A Sbjct: 62 AKAAARDMNGKSLDGKAIKVAQA 84 Score = 53.5 bits (127), Expect = 3e-06 Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 2/161 (1%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDK 710 R K+F+GGL E F ++G I +V++M D T + RGF F+T++S DA Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65 Query: 711 ALFKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRAN-SFLNGYTQGYSPSP 887 A L+GK ++V +A P+ S G +R FL G G Sbjct: 66 ARDMNGKSLDGKAIKVAQATK------PAFESSRRGPPPPRSRGRPRFLRGTRGG----- 114 Query: 888 VGGYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNP 1010 GG R +R G P GGY + P P Sbjct: 115 -GGGPRRSPSRGG---------PDDDGGYAADFDLRPSRAP 145
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana (Mouse-ear| cress) Length = 176 Score = 69.3 bits (168), Expect = 5e-11 Identities = 58/186 (31%), Positives = 79/186 (42%), Gaps = 3/186 (1%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-F 719 + FVGGLA + T F Q+G + D ++ D T R RGFGF+T+ E A+ A+ Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYS--PSPVG 893 +L+G+ + V A + G R GG + +G GYS G Sbjct: 69 MNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGG---------GYRSGGGGGYSGGGGSYG 119 Query: 894 GYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPY 1073 G G R + G SGG Y S GGG G ++ G G GG YG Sbjct: 120 GGGGRREGGGG-YSGGGGGYSSRGGG---GGSYGGGRREGGGG---------YGGGEGGG 166 Query: 1074 YSGNSG 1091 Y G+ G Sbjct: 167 YGGSGG 172 Score = 65.5 bits (158), Expect = 8e-10 Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 + F+GG++W T++ L F +YG+V+++ I+ DR TGR+RGFGF+ F D + I Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68 Query: 417 MEKHMIDGRMVEAKKAVPR 473 M +DGR + +A R Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 69.3 bits (168), Expect = 5e-11 Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 KLFIGG+SW T++ LR+ F +G+VV+A ++ DR TGR+RGFGF+ F D A I Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 417 MEKHMIDGRMVEAKKAVPR 473 M+ ++GR + A R Sbjct: 96 MDGKELNGRHIRVNPANDR 114 Score = 67.0 bits (162), Expect = 3e-10 Identities = 49/148 (33%), Positives = 66/148 (44%), Gaps = 1/148 (0%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 K+F+GGL+ +A R F FG + D V+ D T R RGFGF+ ++ E A A+ + Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 723 -TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGY 899 ELNG+ + V A + +P R+ GG GY+ G GGY Sbjct: 96 MDGKELNGRHIRVNPANDRPSAP----RAYGGG------------GGYSGG-----GGGY 134 Query: 900 GMRMDARFGLLSGGRSSYPSFGGGYGIG 983 G GG Y GGGYG G Sbjct: 135 G-----------GGGGGYGGGGGGYGGG 151
>Q29RT0:HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G - Bos taurus (Bovine)| Length = 396 Score = 68.9 bits (167), Expect = 7e-11 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 3/83 (3%) Frame = +3 Query: 225 MEADA-GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 +EAD GKLFIGG++ +T+E L F KYG + E ++M+DR T ++RGF FI F PA Sbjct: 2 VEADRPGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPAD 61 Query: 402 AERVI--MEKHMIDGRMVEAKKA 464 A+ + M +DG+ ++ +A Sbjct: 62 AKAAVRDMNGKSLDGKAIKVAQA 84 Score = 52.0 bits (123), Expect = 9e-06 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDK 710 R K+F+GGL E F ++G I++V++M D T + RGF FIT++S DA Sbjct: 6 RPGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAA 65 Query: 711 ALFKTFHELNGKMVEVKRAVPKELSPG 791 L+GK ++V +A G Sbjct: 66 VRDMNGKSLDGKAIKVAQATKPAFESG 92
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 68.9 bits (167), Expect = 7e-11 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 2/177 (1%) Frame = +3 Query: 192 STGWK*EPEPEMEADAGK--LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRAR 365 S G++ + D G+ L + + + +D LR F GEV A ++RD+ G + Sbjct: 2 SNGYEDHMAEDCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSL 61 Query: 366 GFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKK 545 G+GF+ + AER I + + + K + R + + + Sbjct: 62 GYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVI--------------KDAN 107 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 +++ GL T+T+ D F +FG I + V+ D T RG FI +D ++A+ Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAI 164 Score = 39.3 bits (90), Expect = 0.058 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALFK 722 IF+ L E F FG +T+V V+ D NT + +GFGF+T + E+A Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 723 TFHELNGKMVEV 758 + L K+++V Sbjct: 306 NGYRLGDKILQV 317 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +FI + D +E L + F +G V ++RD T + +GFGF+ + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 294
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 68.2 bits (165), Expect = 1e-10 Identities = 60/199 (30%), Positives = 76/199 (38%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 + FVGGLA F FG + D V+ D T R RGFGF+T+ SE +++ Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSE----QSMLD 64 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 +NGK ++ G N +N+A S G G GGYG Sbjct: 65 AIENMNGKELD--------------------GRNITVNQAQSRGGGGGGGGYGGGGGGYG 104 Query: 903 MRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSG 1082 R +G GG GGGYG G G G GG GR+ Y G Sbjct: 105 GREGGGYGGGGGGYGGRREGGGGYGGG-----GYGGGGGGYG--------GREGGGGYGG 151 Query: 1083 NSGRYNSNISYGGVNDNSG 1139 G YGG +SG Sbjct: 152 GGG-------YGGNRGDSG 163 Score = 62.4 bits (150), Expect = 6e-09 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 + F+GG++W TN + L + F +G+V+++ ++ DR TGR+RGFGF+ F+ I Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68 Query: 417 MEKHMIDGRMVEAKKAVPR 473 M +DGR + +A R Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 67.8 bits (164), Expect = 2e-10 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 7/203 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADAGK---LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A + ++I D +++RL+E+F +YG + +M D Sbjct: 166 RKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTD 225 Query: 345 RATGRARGFGFIVFADPAVAERVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXX 518 G++RGFGF+ F A++ + M ++G+ + +A + ++Q Sbjct: 226 -DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + ++V L + + R F FG+IT VM + R +GFGF+ + S Sbjct: 285 QDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEGG--RSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVK 761 + KA+ E+NG++V K Sbjct: 343 PEEATKAV----TEMNGRIVATK 361 Score = 57.4 bits (137), Expect = 2e-07 Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 2/212 (0%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D E L E F G ++ + RD T R+ G+ ++ F PA AER + M Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I G+ V + RD IF+ L ++ Sbjct: 73 NFDVIKGKPVRIMWS-QRDPS-------------LRKSGVGNIFIKNLDKSIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG I V+ D N +G+GF+ +++++A ++A+ K +NG ++ ++ Sbjct: 119 FSAFGNILSCKVVCDENGS--KGYGFVHFETQEAAERAIDK----MNGMLLNDRKVFVGR 172 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 + G RA F N Y + + Sbjct: 173 FKSRKEREAELGA------RAKEFTNVYIKNF 198 Score = 55.5 bits (132), Expect = 8e-07 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 3/186 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 ++ G +FI + + L + F +G ++ ++ D ++G+GF+ F AE Sbjct: 95 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAE 152 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 R I M +++ R V + R +++A +++ + + Sbjct: 153 RAIDKMNGMLLNDRKVFVGRFKSRKEREA--------ELGARAKEFTNVYIKNFGEDMDD 204 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-FKTFHELNGKMVEV 758 + +F Q+G V VM D + + RGFGF++++ + KA+ +LNGK + V Sbjct: 205 ERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFV 263 Query: 759 KRAVPK 776 RA K Sbjct: 264 GRAQKK 269
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 67.0 bits (162), Expect = 3e-10 Identities = 70/306 (22%), Positives = 122/306 (39%), Gaps = 31/306 (10%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 +++ ++ T +D L+ F +YG++ AV+M+D G+++GFGF+ F + A R + + Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESL 275 Query: 420 EKHMIDGRMVEAKKAVPRDDQQA--LXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFR 593 H D + +A + +++ ++ ++V L ++++ + Sbjct: 276 NGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLK 335 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK---- 761 F FGT+T VM D N +G GF+ + + + +A+ +L+GKM+E K Sbjct: 336 EIFSPFGTVTSSKVMRDPN-GTSKGSGFVAFATPEEATEAM----SQLSGKMIESKPLYV 390 Query: 762 --------------------RAVPKELSPGPSMR-SPAGGINYVMNRANSFLNGYTQGYS 878 R V + S GP M P GG G Sbjct: 391 AIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPGI----GQQMFYGQAPPAM 446 Query: 879 PSPVGGYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNP--GIGGSSNFNNSVQY 1052 P GYG + G+ GG PSF F P + P G +Q+ Sbjct: 447 IPPQPGYGYQQQLVPGMRPGG-GPVPSF---------FMPMVQPQQQRPGGGRRPGGIQH 496 Query: 1053 GRQINP 1070 +Q NP Sbjct: 497 SQQQNP 502 Score = 60.5 bits (145), Expect = 2e-08 Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 2/188 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L++G + ++ + +L + F + G VV + RD T R+ G+G++ F +P A R I E Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97 Query: 426 HMID--GRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + I G+ + + RD IF+ L ++ Sbjct: 98 NYIPLYGKPIRVMYS-HRDPS-------------VRRSGAGNIFIKNLDESIDHKALHDT 143 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG I V D + Q +G+GF+ Y +E++ KA+ K LNG ++ K+ Sbjct: 144 FSSFGNIVSCKVAVDSSGQ-SKGYGFVQYANEESAQKAIEK----LNGMLLN-----DKQ 193 Query: 780 LSPGPSMR 803 + GP +R Sbjct: 194 VYVGPFLR 201 Score = 37.7 bits (86), Expect = 0.17 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY-DSEDAVDKALFK 722 ++VG L VT++ F Q GT+ V V D T+R G+G++ + + +DA Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMN 836 + L GK + V + PS+R G ++ N Sbjct: 98 NYIPLYGKPIRVMYS-----HRDPSVRRSGAGNIFIKN 130
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 67.0 bits (162), Expect = 3e-10 Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 17/234 (7%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + + ++ L+ F GE+ ++RD+ TG++ G+GF+ + DP AE+ I Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + + + K + R ++ R ++V GL T+T+ + F Sbjct: 101 NGLRLQTKTIKVSYARPSSASI--------------RDANLYVSGLPKTMTQKELEQLFS 146 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-------------TFHELNGK 746 Q+G I ++ D T RG GFI +D ++A+ T N Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNP 206 Query: 747 MVEVKRAVPKELSPGPSMRSPAGGINYVMN-RANSFLN---GYTQGYSPSPVGG 896 + +A+ +L P+ R P R ++ LN G +SP + G Sbjct: 207 SQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDG 260 Score = 42.0 bits (97), Expect = 0.009 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 IFV LA E+ F FG +T+V V+ D NT + +GFGF+T + D A+ Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 335 Score = 34.7 bits (78), Expect = 1.4 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +F+ ++ D +E L + F +G V ++RD T + +GFGF+ + Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 327
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 67.0 bits (162), Expect = 3e-10 Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 2/177 (1%) Frame = +3 Query: 192 STGWK*EPEPEMEADAGK--LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRAR 365 S G++ + D G+ L + + + ++ LR F GEV A ++RD+ G + Sbjct: 2 SGGYEDHMAEDCRGDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSL 61 Query: 366 GFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKK 545 G+GF+ + AER I + + + K + R + + + Sbjct: 62 GYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVI--------------KDAN 107 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 +++ GL T+T+ D F +FG I + V+ D T RG FI +D ++A+ Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAI 164 Score = 38.1 bits (87), Expect = 0.13 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFIT 683 IF+ L E F FG +T+V V+ D NT + +GFGF+T Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 291 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +FI + D +E L + F +G V ++RD T + +GFGF+ + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 294
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 66.6 bits (161), Expect = 3e-10 Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 12/241 (4%) Frame = +3 Query: 213 PEPEMEADAGK-------LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGF 371 P E E + G+ +++ + D ++++L+E+FE YG++ +M + G+++GF Sbjct: 167 PRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGF 225 Query: 372 GFIVFADPAVAERVIME---KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRT- 539 GF+ F AE + K M +G+ + +A + ++Q Sbjct: 226 GFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVF 285 Query: 540 -KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 ++V L T+ + R F +G IT VM D R +GFGF+ +++ A+ Sbjct: 286 GVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAV 344 Query: 717 FKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGG 896 ELNG++V K + L+ R Y+ + + Q Y P+ G Sbjct: 345 ----TELNGRVVGSK-PLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQIYQPNAASG 399 Query: 897 Y 899 + Sbjct: 400 F 400 Score = 54.7 bits (130), Expect = 1e-06 Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 3/181 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D NE L + F G V+ + RD T R+ G+ ++ F PA AER + M Sbjct: 4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTM 63 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 ++ + + + RD +F+ L + Sbjct: 64 NFDLVRNKPIRIMWS-QRDPS-------------LRRSGVGNVFIKNLDRAIDNKAIYDT 109 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE-LNGKMVEVKRAVPK 776 F FG I V D +G+GF+ +++E+A + ++ K LNGK V V + +P+ Sbjct: 110 FSAFGNILSCKVATDEK-GNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPR 168 Query: 777 E 779 + Sbjct: 169 K 169
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 66.6 bits (161), Expect = 3e-10 Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 4/176 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +F+ I D ++++L+E F +YG ++RD A+G+++GFGF+ + A++ +++ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEADFR 593 H IDG+++ +A + ++ A R I++ L T+ + + Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 F FG+I+ VM + + +GFG + + S + KA+ E+NG++V K Sbjct: 320 EEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAV----DEMNGRIVGSK 369 Score = 47.0 bits (110), Expect = 3e-04 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 3/176 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D ED L + F G + I RD T G+G++ F PA AE + M Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I+G+ + P D IF+ L ++ Sbjct: 80 NFDLINGKPFRLMWSQPDD--------------RLRKSGVGNIFIKNLDKSIDNRALFYL 125 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF-KTFHELNGKMVEVKR 764 F FG I V+ D N +G+ ++ +DS A ++A++ LN + V V R Sbjct: 126 FSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGR 179
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 66.6 bits (161), Expect = 3e-10 Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 4/176 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +F+ I D ++++L+E F +YG ++RD A+G+++GFGF+ + A++ +++ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEADFR 593 H IDG+++ +A + ++ A R I++ L T+ + + Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 F FG+I+ VM + + +GFG + + S + KA+ E+NG++V K Sbjct: 320 EEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAV----DEMNGRIVGSK 369 Score = 47.0 bits (110), Expect = 3e-04 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 3/176 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D ED L + F G + I RD T G+G++ F PA AE + M Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I+G+ + P D IF+ L ++ Sbjct: 80 NFDLINGKPFRLMWSQPDD--------------RLRKSGVGNIFIKNLDKSIDNRALFYL 125 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF-KTFHELNGKMVEVKR 764 F FG I V+ D N +G+ ++ +DS A ++A++ LN + V V R Sbjct: 126 FSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGR 179
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 66.6 bits (161), Expect = 3e-10 Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 4/176 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +F+ I D ++++L+E F +YG ++RD A+G+++GFGF+ + A++ +++ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEADFR 593 H IDG+++ +A + ++ A R I++ L T+ + + Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 F FG+I+ VM + + +GFG + + S + KA+ E+NG++V K Sbjct: 320 EEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAV----DEMNGRVVGSK 369 Score = 47.0 bits (110), Expect = 3e-04 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 3/176 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D ED L + F G + I RD T G+G++ F PA AE + M Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I+G+ + P D IF+ L ++ Sbjct: 80 NFDLINGKPFRLMWSQPDD--------------RLRKSGVGNIFIKNLDKSIDNRALFYL 125 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF-KTFHELNGKMVEVKR 764 F FG I V+ D N +G+ ++ +DS A ++A++ LN + V V R Sbjct: 126 FSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGR 179
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 66.6 bits (161), Expect = 3e-10 Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 4/176 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +F+ I D ++++L+E F +YG ++RD A+G+++GFGF+ + A++ +++ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEADFR 593 H IDG+++ +A + ++ A R I++ L T+ + + Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 F FG+I+ VM + + +GFG + + S + KA+ E+NG++V K Sbjct: 320 EEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAV----DEMNGRIVGSK 369 Score = 47.0 bits (110), Expect = 3e-04 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 3/176 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D ED L + F G + I RD T G+G++ F PA AE + M Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I+G+ + P D IF+ L ++ Sbjct: 80 NFDLINGKPFRLMWSQPDD--------------RLRKSGVGNIFIKNLDKSIDNRALFYL 125 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF-KTFHELNGKMVEVKR 764 F FG I V+ D N +G+ ++ +DS A ++A++ LN + V V R Sbjct: 126 FSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGR 179
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 66.6 bits (161), Expect = 3e-10 Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 4/176 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +F+ I D ++++L+E F +YG ++RD A+G+++GFGF+ + A++ +++ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEADFR 593 H IDG+++ +A + ++ A R I++ L T+ + + Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 F FG+I+ VM + + +GFG + + S + KA+ E+NG++V K Sbjct: 320 EEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAV----DEMNGRIVGSK 369 Score = 47.0 bits (110), Expect = 3e-04 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 3/176 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D ED L + F G + I RD T G+G++ F PA AE + M Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I+G+ + P D IF+ L ++ Sbjct: 80 NFDLINGKPFRLMWSQPDD--------------RLRKSGVGNIFIKNLDKSIDNRALFYL 125 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF-KTFHELNGKMVEVKR 764 F FG I V+ D N +G+ ++ +DS A ++A++ LN + V V R Sbjct: 126 FSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGR 179
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 66.6 bits (161), Expect = 3e-10 Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 4/176 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +F+ I D ++++L+E F +YG ++RD A+G+++GFGF+ + A++ +++ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLASTVTEADFR 593 H IDG+++ +A + ++ A R I++ L T+ + + Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 594 TYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK 761 F FG+I+ VM + + +GFG + + S + KA+ E+NG++V K Sbjct: 320 EEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAV----DEMNGRIVGSK 369 Score = 47.0 bits (110), Expect = 3e-04 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 3/176 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D ED L + F G + I RD T G+G++ F PA AE + M Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 +I+G+ + P D IF+ L ++ Sbjct: 80 NFDLINGKPFRLMWSQPDD--------------RLRKSGVGNIFIKNLDKSIDNRALFYL 125 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF-KTFHELNGKMVEVKR 764 F FG I V+ D N +G+ ++ +DS A ++A++ LN + V V R Sbjct: 126 FSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGR 179
>P17132:HNRPC_RAT Heterogeneous nuclear ribonucleoprotein C - Rattus norvegicus (Rat)| Length = 158 Score = 66.6 bits (161), Expect = 3e-10 Identities = 36/120 (30%), Positives = 61/120 (50%) Frame = +3 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 ++H ++G++++ K+A ++ + KKIFVGGL+ E R Y Sbjct: 10 KEHKLNGKVIDPKRAKAMKTKEPV----------------KKIFVGGLSPDTPEEKIREY 53 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F FG + + + D+ T + RGF FIT+ E+ V K + K +H + E+K A+ KE Sbjct: 54 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKE 113 Score = 57.8 bits (138), Expect = 2e-07 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+GG+S DT E+++REYF +GEV + D T + RGF FI F + ++++ + Sbjct: 35 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 94 Query: 423 K-HMIDGRMVEAKKAVPRDDQQ 485 K H + E K A+ ++ Q Sbjct: 95 KYHNVGLSKCEIKVAMSKEQYQ 116
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 66.2 bits (160), Expect = 4e-10 Identities = 38/157 (24%), Positives = 72/157 (45%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + + ++ L+ F GE+ ++RD+ TG++ G+GF+ + DP AE+ I Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + + + K + R ++ R ++V GL T+T+ + F Sbjct: 101 NGLRLQTKTIKVSYARPSSASI--------------RDANLYVSGLPKTMTQKELEQLFS 146 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 Q+G I ++ D T RG GFI +D ++A+ Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Score = 42.0 bits (97), Expect = 0.009 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 IFV LA E+ F FG +T+V V+ D NT + +GFGF+T + D A+ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334 Score = 34.7 bits (78), Expect = 1.4 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +F+ ++ D +E L + F +G V ++RD T + +GFGF+ + Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 326
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 66.2 bits (160), Expect = 4e-10 Identities = 38/157 (24%), Positives = 72/157 (45%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + + ++ L+ F GE+ ++RD+ TG++ G+GF+ + DP AE+ I Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + + + K + R ++ R ++V GL T+T+ + F Sbjct: 101 NGLRLQTKTIKVSYARPSSASI--------------RDANLYVSGLPKTMTQKELEQLFS 146 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 Q+G I ++ D T RG GFI +D ++A+ Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Score = 42.0 bits (97), Expect = 0.009 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 IFV LA E+ F FG +T+V V+ D NT + +GFGF+T + D A+ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334 Score = 34.7 bits (78), Expect = 1.4 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +F+ ++ D +E L + F +G V ++RD T + +GFGF+ + Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 326
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 65.9 bits (159), Expect = 6e-10 Identities = 51/194 (26%), Positives = 81/194 (41%) Frame = +3 Query: 162 RQPARDPFPGSTGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMR 341 + P R+P T PE E DA +F ++ L E+F G+V + ++ Sbjct: 135 KSPVREPIDNLT-------PE-ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMIS 186 Query: 342 DRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXX 521 DR + R+RG ++ F D + I + R++ V + Sbjct: 187 DRNSRRSRGIAYVEFVDVSSVRLAI---GLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ 243 Query: 522 XXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDA 701 +++VG L +TE R FE FG I + +M D T R +G+GFIT+ + Sbjct: 244 KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSEC 303 Query: 702 VDKALFKTFHELNG 743 KAL +LNG Sbjct: 304 AKKAL----EQLNG 313 Score = 53.9 bits (128), Expect = 2e-06 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 +L++G + ++ ED LR FE +G + +M D TGR++G+GFI F+D A++ + + Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310 Query: 423 KHMID--GRMVEAKKAVPRDD 479 + + GR ++ R D Sbjct: 311 LNGFELAGRPMKVGHVTERTD 331
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 65.9 bits (159), Expect = 6e-10 Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 11/189 (5%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERV---- 413 L++ + D +ED LRE F ++G++V I +D RG+ F+ F +P A R Sbjct: 203 LYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDE-NRLCRGYAFVNFDNPEDARRAAETV 261 Query: 414 ----IMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 K + GR A+K R +Q + I+V + VTE Sbjct: 262 NGTKFGSKCLYVGR---AQKKAER-EQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTE 317 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALFKTFH--ELNGKMV 752 + R +F Q GTIT +M D + +GFGF+ + + E+A+D KTFH +GK + Sbjct: 318 EELRKHFSQCGTITSTKLMCDEK-GKSKGFGFVCFSTPEEAIDAV--KTFHGQMFHGKPL 374 Query: 753 EVKRAVPKE 779 V A KE Sbjct: 375 YVAIAQKKE 383 Score = 49.7 bits (117), Expect = 4e-05 Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 2/159 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L++G + E L + F ++ + + +D ++GR+ +G+ F A I +K Sbjct: 26 LYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKK 85 Query: 426 H--MIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 + +++G+M+ +V D + +FV L +VT A + Sbjct: 86 NNSLLNGKMIRVMWSVRAPDAR--------------RNGVGNVFVKNLPESVTNAVLQDM 131 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 F++FG I V + RG+GF+ ++ EDA A+ Sbjct: 132 FKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAI 169 Score = 40.4 bits (93), Expect = 0.026 Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 1/148 (0%) Frame = +3 Query: 537 TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 T ++VG L +VTE F +F ++T V + D ++ R +G+ + S + A+ Sbjct: 23 TASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAI 82 Query: 717 FKTFHE-LNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVG 893 K + LNGKM+ V +V P R G +V N S N Q Sbjct: 83 EKKNNSLLNGKMIRVMWSV-----RAPDARRNGVGNVFVKNLPESVTNAVLQDMFKK--- 134 Query: 894 GYGMRMDARFGLLSGGRSSYPSFGGGYG 977 +G + + L G+S GYG Sbjct: 135 -FGNIVSCKVATLEDGKSR------GYG 155
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 65.9 bits (159), Expect = 6e-10 Identities = 38/157 (24%), Positives = 71/157 (45%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + + ++ R F GE+ ++RD+ TG++ G+GF+ + DP AE+ I Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + + + K + R ++ R ++V GL T+T+ + F Sbjct: 101 NGLRLQTKTIKVSYARPSSASI--------------RDANLYVSGLPKTMTQKELEQLFS 146 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 Q+G I ++ D T RG GFI +D ++A+ Sbjct: 147 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 183 Score = 38.1 bits (87), Expect = 0.13 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 IFV L+ E+ F FG + +V V+ D NT + +GFGF+T + D A+ Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 348 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +F+ +S D++E L + F +G V ++RD T + +GFGF+ + Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTN 340
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 65.9 bits (159), Expect = 6e-10 Identities = 38/157 (24%), Positives = 71/157 (45%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + + ++ R F GE+ ++RD+ TG++ G+GF+ + DP AE+ I Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + + + K + R ++ R ++V GL T+T+ + F Sbjct: 113 NGLRLQTKTIKVSYARPSSASI--------------RDANLYVSGLPKTMTQKELEQLFS 158 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 Q+G I ++ D T RG GFI +D ++A+ Sbjct: 159 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 195 Score = 38.1 bits (87), Expect = 0.13 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 IFV L+ E+ F FG + +V V+ D NT + +GFGF+T + D A+ Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 360 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +F+ +S D++E L + F +G V ++RD T + +GFGF+ + Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTN 352
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 65.9 bits (159), Expect = 6e-10 Identities = 38/157 (24%), Positives = 71/157 (45%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + + ++ R F GE+ ++RD+ TG++ G+GF+ + DP AE+ I Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + + + K + R ++ R ++V GL T+T+ + F Sbjct: 108 NGLRLQTKTIKVSYARPSSASI--------------RDANLYVSGLPKTMTQKELEQLFS 153 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 Q+G I ++ D T RG GFI +D ++A+ Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 190 Score = 38.1 bits (87), Expect = 0.13 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 IFV L+ E+ F FG + +V V+ D NT + +GFGF+T + D A+ Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 355 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +F+ +S D++E L + F +G V ++RD T + +GFGF+ + Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTN 347
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 65.5 bits (158), Expect = 8e-10 Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 7/203 (3%) Frame = +3 Query: 174 RDPFPGSTGWK*EPEPEMEADA---GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 R F G + E E E+ A A +++ + D +E L++ F ++G+++ +MRD Sbjct: 166 RKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD 225 Query: 345 RATGRARGFGFIVFADPAVAERVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXX 518 + G +R FGF+ F A++ + M + GR++ A +A R ++Q Sbjct: 226 NS-GHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284 Query: 519 XXXXXRTK--KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS 692 R + ++V L ++ + R F +G IT VM + +GFGF+ + S Sbjct: 285 QDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGG--HSKGFGFVCFSS 342 Query: 693 EDAVDKALFKTFHELNGKMVEVK 761 + KA+ E+NG++V K Sbjct: 343 PEEATKAV----TEMNGRIVGTK 361 Score = 54.7 bits (130), Expect = 1e-06 Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 2/175 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L++G + D E L E F G ++ + RD AT R+ G+ +I F PA AER + M Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 M+ G Q + IF+ L ++ Sbjct: 73 NFEMLKG--------------QPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDT 118 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR 764 F FG I V D + R GFGF+ +++ +A +A+ + +NG ++ ++ Sbjct: 119 FSTFGNILSCKVACDEHGSR--GFGFVHFETHEAAQQAI----NTMNGMLLNDRK 167 Score = 34.7 bits (78), Expect = 1.4 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 1/105 (0%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-FK 722 ++VG L VTEA F G I + V D T+R G+ +I + ++AL Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLN 857 F L G+ + + + P +R G ++ N +S N Sbjct: 73 NFEMLKGQPIRIMWS-----QRDPGLRKSGVGNIFIKNLEDSIDN 112
>Q9IBD1:CELF3_DANRE CUG-BP- and ETR-3-like factor 3 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 452 Score = 65.5 bits (158), Expect = 8e-10 Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 5/168 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA---DPA 398 EADA KLFIG I + E L+ FE++G++ E +++D+ TG +G F+ + Sbjct: 3 EADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESAL 62 Query: 399 VAERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + E+ + G R ++ K P D + +K+FVG L Sbjct: 63 KAQNALHEQKTLPGMNRPIQVK---PADSE---------------GRGDRKLFVGMLGKQ 104 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 +++AD R FE FG+I + V+ + +G F+ Y S A+ Sbjct: 105 LSDADVRKMFEPFGSIEECTVLRGPD-GASKGCAFVKYQSNAEAQAAI 151 Score = 40.8 bits (94), Expect = 0.020 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 +FI + + + + + F +G V+ A + DRAT +++ FGF+ F +PA A+ I M Sbjct: 369 IFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 428 Query: 420 EKHMIDGRMVEAKKAVPRD 476 I + ++ + P+D Sbjct: 429 NGFQIGMKRLKVQLKRPKD 447 Score = 36.2 bits (82), Expect = 0.49 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 IF+ L T+++ F FG + V D T + + FGF+++D+ + A+ Sbjct: 369 IFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAI--- 425 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 426 -QAMNGFQIGMKR 437
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 65.1 bits (157), Expect = 1e-09 Identities = 37/146 (25%), Positives = 68/146 (46%) Frame = +3 Query: 279 EDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAK 458 ++ L+ F GE+ ++RD+ TG++ G+GF+ + DP AE+ I + + + K Sbjct: 52 QEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIK 111 Query: 459 KAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVM 638 + R ++ R ++V GL T+T+ + F Q+G I ++ Sbjct: 112 VSYARPSSASI--------------RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157 Query: 639 YDHNTQRPRGFGFITYDSEDAVDKAL 716 D T RG GFI +D ++A+ Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAI 183 Score = 42.0 bits (97), Expect = 0.009 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 IFV LA E+ F FG +T+V V+ D NT + +GFGF+T + D A+ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334 Score = 40.8 bits (94), Expect = 0.020 Identities = 19/57 (33%), Positives = 31/57 (54%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI 416 L++ G+ + L + F +YG ++ + I+ D+ TG +RG GFI F AE I Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Score = 34.7 bits (78), Expect = 1.4 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +F+ ++ D +E L + F +G V ++RD T + +GFGF+ + Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 326
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 64.7 bits (156), Expect = 1e-09 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 8/202 (3%) Frame = +3 Query: 162 RQPARDPFPGSTGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMR 341 + P R+P T PE E DA +F ++ L E+F G+V + ++ Sbjct: 135 KSPVREPIDNLT-------PE-ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMIS 186 Query: 342 DRATGRARGFGFIVFADPA--------VAERVIMEKHMIDGRMVEAKKAVPRDDQQALXX 497 DR + R++G ++ F D + +RV+ ++ E +A + Sbjct: 187 DRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN----- 241 Query: 498 XXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGF 677 +++VG L +TE R FE FG I + +M D T R +G+GF Sbjct: 242 ------LQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295 Query: 678 ITYDSEDAVDKALFKTFHELNG 743 IT+ + KAL +LNG Sbjct: 296 ITFSDSECAKKAL----EQLNG 313 Score = 53.9 bits (128), Expect = 2e-06 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 +L++G + ++ ED LR FE +G + +M D TGR++G+GFI F+D A++ + + Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310 Query: 423 KHMID--GRMVEAKKAVPRDD 479 + + GR ++ R D Sbjct: 311 LNGFELAGRPMKVGHVTERTD 331
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 64.7 bits (156), Expect = 1e-09 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 8/202 (3%) Frame = +3 Query: 162 RQPARDPFPGSTGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMR 341 + P R+P T PE E DA +F ++ L E+F G+V + ++ Sbjct: 135 KSPVREPIDNLT-------PE-ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMIS 186 Query: 342 DRATGRARGFGFIVFADPA--------VAERVIMEKHMIDGRMVEAKKAVPRDDQQALXX 497 DR + R++G ++ F D + +RV+ ++ E +A + Sbjct: 187 DRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN----- 241 Query: 498 XXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGF 677 +++VG L +TE R FE FG I + +M D T R +G+GF Sbjct: 242 ------LQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295 Query: 678 ITYDSEDAVDKALFKTFHELNG 743 IT+ + KAL +LNG Sbjct: 296 ITFSDSECAKKAL----EQLNG 313 Score = 53.9 bits (128), Expect = 2e-06 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 +L++G + ++ ED LR FE +G + +M D TGR++G+GFI F+D A++ + + Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310 Query: 423 KHMID--GRMVEAKKAVPRDD 479 + + GR ++ R D Sbjct: 311 LNGFELAGRPMKVGHVTERTD 331
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 64.7 bits (156), Expect = 1e-09 Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 6/185 (3%) Frame = +3 Query: 240 GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIM 419 G +FI + + L + F +G+++ + D G A+G+GF+ F A I Sbjct: 168 GNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDEL-GNAKGYGFVHFDSVESANAAIE 226 Query: 420 EKHMIDGRMVEAKKA-----VPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEA 584 ++G ++ KK V R ++Q+ +++ L + +TE Sbjct: 227 H---VNGMLLNDKKVYVGHHVSRRERQS--------KVEALKANFTNVYIKNLDTEITEQ 275 Query: 585 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEVK 761 +F F QFG IT + ++ D N +PRGFGF+ Y + + KA+ + E GK + V Sbjct: 276 EFSDLFGQFGEITSLSLVKDQN-DKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVG 334 Query: 762 RAVPK 776 RA K Sbjct: 335 RAQKK 339 Score = 59.7 bits (143), Expect = 4e-08 Identities = 64/285 (22%), Positives = 119/285 (41%), Gaps = 24/285 (8%) Frame = +3 Query: 225 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVA 404 ++A+ ++I + + E + F ++GE+ +++D+ + RGFGF+ +A+ A Sbjct: 256 LKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECA 314 Query: 405 ERVIMEKHMID--GRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLAST 572 ++ + E + + G+ + +A + +++ + + +F+ L Sbjct: 315 QKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDE 374 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE-LNGKM 749 V + + F FGTIT +M D + +GFGF+ Y + + +KA+ + L GK Sbjct: 375 VDDERLKAEFSAFGTITSAKIMTDEQG-KSKGFGFVCYTTPEEANKAVTEMNQRMLAGKP 433 Query: 750 VEVKRAVPKELSPG--------------PSMRSPAGGINYVMNRANSFLNGYTQGYS-PS 884 + V A KE+ + A GI V A L GY P+ Sbjct: 434 LYVALAQRKEVRRSQLEAQIQARNQFRLQQQVAAAAGIPAVQYGATGPLIYGPGGYPIPA 493 Query: 885 PVGGYGMRM----DARFGLLSGGRSSYPSFGGGYGIGMNFDPGMN 1007 V G GM M + + G + +P+ G G PGMN Sbjct: 494 AVNGRGMPMVPGHNGPMPMYPGMPTQFPAGGPAPGY-----PGMN 533 Score = 37.4 bits (85), Expect = 0.22 Identities = 25/97 (25%), Positives = 45/97 (46%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 ++VG L +VTEA F G + + V D T+R G+ ++ + + + +KAL Sbjct: 82 LYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKAL--- 138 Query: 726 FHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMN 836 ELN +++ + PS+R G ++ N Sbjct: 139 -DELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKN 174
>Q5NVC8:CELF4_PONPY CUG-BP- and ETR-3-like factor 4 - Pongo pygmaeus (Orangutan)| Length = 486 Score = 64.3 bits (155), Expect = 2e-09 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 7/173 (4%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD-- 392 P + DA KLFIG I + +E L+ FE++G++ E +++DR TG +G F+ + + Sbjct: 47 PMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERE 106 Query: 393 -PAVAERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGL 563 A+ + E+ + G R ++ K P D + + +K+FVG L Sbjct: 107 SALKAQSALHEQKTLPGMNRPIQVK---PADSES----RGGSSCLRQPPSQDRKLFVGML 159 Query: 564 ASTVTEADFRTYFEQFGTITDVVVMY--DHNTQRPRGFGFITYDSEDAVDKAL 716 +E D R FE FG I + ++ D N+ +G F+ Y S A+ Sbjct: 160 NKQQSEDDVRRLFEAFGNIEECTILRGPDGNS---KGCAFVKYSSHAEAQAAI 209
>Q7TSY6:CELF4_MOUSE CUG-BP- and ETR-3-like factor 4 - Mus musculus (Mouse)| Length = 486 Score = 64.3 bits (155), Expect = 2e-09 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 7/173 (4%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD-- 392 P + DA KLFIG I + +E L+ FE++G++ E +++DR TG +G F+ + + Sbjct: 47 PMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERE 106 Query: 393 -PAVAERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGL 563 A+ + E+ + G R ++ K P D + + +K+FVG L Sbjct: 107 SALKAQSALHEQKTLPGMNRPIQVK---PADSES----RGGSSCLRQPPSQDRKLFVGML 159 Query: 564 ASTVTEADFRTYFEQFGTITDVVVMY--DHNTQRPRGFGFITYDSEDAVDKAL 716 +E D R FE FG I + ++ D N+ +G F+ Y S A+ Sbjct: 160 NKQQSEDDVRRLFEAFGNIEECTILRGPDGNS---KGCAFVKYSSHAEAQAAI 209
>Q9BZC1:CELF4_HUMAN CUG-BP- and ETR-3-like factor 4 - Homo sapiens (Human)| Length = 486 Score = 64.3 bits (155), Expect = 2e-09 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 7/173 (4%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD-- 392 P + DA KLFIG I + +E L+ FE++G++ E +++DR TG +G F+ + + Sbjct: 47 PMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERE 106 Query: 393 -PAVAERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGL 563 A+ + E+ + G R ++ K P D + + +K+FVG L Sbjct: 107 SALKAQSALHEQKTLPGMNRPIQVK---PADSES----RGGSSCLRQPPSQDRKLFVGML 159 Query: 564 ASTVTEADFRTYFEQFGTITDVVVMY--DHNTQRPRGFGFITYDSEDAVDKAL 716 +E D R FE FG I + ++ D N+ +G F+ Y S A+ Sbjct: 160 NKQQSEDDVRRLFEAFGNIEECTILRGPDGNS---KGCAFVKYSSHAEAQAAI 209
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 63.9 bits (154), Expect = 2e-09 Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 1/219 (0%) Frame = +3 Query: 162 RQPARDPFPGSTGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMR 341 + P R+P + PE E DA +F ++ L ++F G+V + I+ Sbjct: 148 KSPVREPVDNLS-------PE-ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIIS 199 Query: 342 DRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXX 521 DR + R++G ++ F + + V + + R++ V + Sbjct: 200 DRNSRRSKGIAYVEFCE---IQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ 256 Query: 522 XXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDA 701 +++VG L +TE R FE FG I ++V+M D +T R +G+GFIT+ + Sbjct: 257 KGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSEC 316 Query: 702 VDKALFK-TFHELNGKMVEVKRAVPKELSPGPSMRSPAG 815 +AL + EL G+ + V V + L G + P G Sbjct: 317 ARRALEQLNGFELAGRPMRVGH-VTERLDGGTDITFPDG 354
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 63.5 bits (153), Expect = 3e-09 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 3/179 (1%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 ++++G IS++ ED +R F +G + + D T + +GF F+ + P A+ + Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190 Query: 417 MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRT 596 M ++ GR ++ + P + QA R I+V + ++E D ++ Sbjct: 191 MNGALMGGRNIKVGR--PSNMPQAQQVIDEVQEEAKSFNR---IYVASIHPDLSEEDIKS 245 Query: 597 YFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEVKRAV 770 FE FG I + + +G+GFI Y ++ A+D+A+ +L G+++ V R++ Sbjct: 246 VFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRVGRSI 304 Score = 41.6 bits (96), Expect = 0.012 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 3/116 (2%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 +++VG ++ + E R F FG I + + +D TQ+ +GF F+ Y+ + AL Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLAL-- 188 Query: 723 TFHELNGKMV---EVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSP 881 ++NG ++ +K P + + I+ V A SF Y P Sbjct: 189 --EQMNGALMGGRNIKVGRPSNMPQAQQV------IDEVQEEAKSFNRIYVASIHP 236
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 63.5 bits (153), Expect = 3e-09 Identities = 35/157 (22%), Positives = 72/157 (45%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + + +D + F G++ ++RD+ TG++ G+GF+ ++DP A++ I Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + + + K + R ++ R ++V GL T+++ + F Sbjct: 101 NGLKLQTKTIKVSYARPSSASI--------------RDANLYVSGLPKTMSQKEMEQLFS 146 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 Q+G I ++ D T RG GFI +D ++A+ Sbjct: 147 QYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAI 183 Score = 38.5 bits (88), Expect = 0.099 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 IFV L+ E+ F FG +T+V V+ D T + +GFGF+T + D A+ Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAI 342 Score = 35.0 bits (79), Expect = 1.1 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +F+ +S + +E L + F +G V ++RD T + +GFGF+ + Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 334
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 63.2 bits (152), Expect = 4e-09 Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 20/264 (7%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 +F+G +S + + ++ F +G++ +A +++D ATG+++G+GF+ F + AE I M Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175 Query: 420 EKHMIDGRMVEA-----KKAVPRDDQQA-LXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 + GR + K P+ Q+ + ++ GG+AS +T+ Sbjct: 176 GGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 235 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE-- 755 R F FG I ++ V + +G+ F+ + + ++ A+ +NG +E Sbjct: 236 QLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIV----SVNGTTIEGH 285 Query: 756 -VKRAVPKELSPGPSMRSPAGGINY--------VMNRANSFLNGYTQGYSPSPVGGYGMR 908 VK KE P M ++Y V + G+ P G YG Sbjct: 286 VVKCYWGKE---SPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 342 Query: 909 MDAR-FGLLSGGRSSYPSFGGGYG 977 + + FG+ +S ++ GG+G Sbjct: 343 WNQQGFGV---DQSPSAAWMGGFG 363
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 63.2 bits (152), Expect = 4e-09 Identities = 76/268 (28%), Positives = 104/268 (38%), Gaps = 3/268 (1%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 407 E D+ L + +S+ ED LRE FEK I + GRA+GF FI F+ A+ Sbjct: 411 EGDSKVLVVNNLSYSATEDSLREVFEK-----ATSIRIPQNQGRAKGFAFIEFSSAEDAK 465 Query: 408 RVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 + I+GR + + + Q ++K +FV GL+ TE Sbjct: 466 DAMDSCNNTEIEGRSIRLEFSQGGGPQ---------GGGRGGSAQSKTLFVRGLSEDTTE 516 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEV 758 T E F + ++ D +T +GFGF+ + +EDA E++G V + Sbjct: 517 ---ETLKEAFDGSVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTL 573 Query: 759 KRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSG 938 A PK G S R GG R F G GG G FG G Sbjct: 574 DFAKPK----GDSQRGGRGG----FGRGGGFRGGR---------GGRGGGGGRGFGGRGG 616 Query: 939 GRSSYPSFGGGYGIGMNFDPGMNPGIGG 1022 GR FGG G G F G G G Sbjct: 617 GRGR-GGFGGRGGGG--FRGGQGGGFRG 641 Score = 38.5 bits (88), Expect = 0.099 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 6/196 (3%) Frame = +3 Query: 246 LFIGGIS----WDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERV 413 +FIG ++ +D +D LRE+F K + + ++D G ++ FG++ F+ E+ Sbjct: 235 IFIGNLNSTKEFDELKDALREFFSK-----KNLTIQDIRIGNSKKFGYVDFSSEEEVEKA 289 Query: 414 I-MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADF 590 + + I G V+ +KA+ D + ++ +FV + + T + Sbjct: 290 LKLTGKKILGTEVKIEKAMAFDKNKTAENKKERD--------SRTLFVKNIPYSTTVEEL 341 Query: 591 RTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-FKTFHELNGKMVEVKRA 767 + FE I N +G ++ + +ED +KAL K E+ G+ + V Sbjct: 342 QEIFENAKDIRIPTGKDGSN----KGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDFT 397 Query: 768 VPKELSPGPSMRSPAG 815 K + G + + P G Sbjct: 398 GEKSQNSG-NKKGPEG 412
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 63.2 bits (152), Expect = 4e-09 Identities = 35/157 (22%), Positives = 72/157 (45%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + + +D + F G++ ++RD+ TG++ G+GF+ ++DP A++ I Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + + + K + R ++ R ++V GL T+++ + F Sbjct: 101 NGLKLQTKTIKVSYARPSSASI--------------RDANLYVSGLPKTMSQKEMEQLFS 146 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 Q+G I ++ D T RG GFI +D ++A+ Sbjct: 147 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 183 Score = 38.5 bits (88), Expect = 0.099 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 IFV L+ E+ F FG +T+V V+ D T + +GFGF+T + D A+ Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAI 342 Score = 35.0 bits (79), Expect = 1.1 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 +F+ +S + +E L + F +G V ++RD T + +GFGF+ + Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 334
>Q4R535:CELF4_MACFA CUG-BP- and ETR-3-like factor 4 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 474 Score = 63.2 bits (152), Expect = 4e-09 Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 7/173 (4%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD-- 392 P + DA KLFIG I + +E L+ FE++G++ E +++DR TG +G F+ + + Sbjct: 47 PMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERE 106 Query: 393 -PAVAERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGL 563 A+ + E+ + G R ++ K P D + +K+FVG L Sbjct: 107 SALKAQSALHEQKTLPGMNRPIQVK---PADSES---------------RGDRKLFVGML 148 Query: 564 ASTVTEADFRTYFEQFGTITDVVVMY--DHNTQRPRGFGFITYDSEDAVDKAL 716 +E D R FE FG I + ++ D N+ +G F+ Y S A+ Sbjct: 149 NKQQSEDDVRRLFEAFGNIEECTILRGPDGNS---KGCAFVKYSSHAEAQAAI 198
>Q6DGV1:CELF4_DANRE CUG-BP- and ETR-3-like factor 4 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 520 Score = 63.2 bits (152), Expect = 4e-09 Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 7/173 (4%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA--- 389 P + DA KLFIG I + +E LR FE++G++ E +++DR TG +G F+ + Sbjct: 40 PMKDHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARE 99 Query: 390 DPAVAERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGL 563 A+ + E+ + G R ++ K P D + +K+FVG L Sbjct: 100 SALKAQTALHEQKTLPGMNRPIQVK---PADSES--------------RGEDRKLFVGML 142 Query: 564 ASTVTEADFRTYFEQFGTITDVVVMY--DHNTQRPRGFGFITYDSEDAVDKAL 716 E D R FE FG+I + ++ D N+ +G F+ Y + A+ Sbjct: 143 NKQQCEDDVRRLFESFGSIEECTILRGPDGNS---KGCAFVKYSTHAEAQAAI 192 Score = 42.0 bits (97), Expect = 0.009 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Frame = +3 Query: 213 PEPEMEADAG-KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA 389 P+ + E G LFI + + + L + F +G V+ + + DRAT +++ FGF+ F Sbjct: 425 PQQQREGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFD 484 Query: 390 DPAVAERVI--MEKHMIDGRMVEAKKAVPRD 476 +P A+ I M I + ++ + P+D Sbjct: 485 NPGSAQAAIQSMNGFQIGMKRLKVQLKRPKD 515 Score = 32.7 bits (73), Expect = 5.4 Identities = 17/73 (23%), Positives = 33/73 (45%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + + F FG + V D T + + FGF+++D+ + A+ Sbjct: 437 LFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAI--- 493 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 494 -QSMNGFQIGMKR 505
>Q6IQ97:RBM4_DANRE RNA-binding protein 4 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 419 Score = 62.8 bits (151), Expect = 5e-09 Identities = 72/319 (22%), Positives = 128/319 (40%), Gaps = 26/319 (8%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 K+F+G +S +T + +R F +YG++ E I+++ FGF+ + A+ I Sbjct: 3 KIFVGNLSPNTTAEEIRSLFSQYGKISECDIVKN--------FGFVHMDSKSEADEAIQN 54 Query: 423 KH--MIDGRM--VEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADF 590 H M++G VE K P+ + K+ VG ++S+ T + Sbjct: 55 LHHYMLNGMAMNVEMSKGKPK--------------------TSTKLHVGNISSSCTNQEL 94 Query: 591 RTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALFKTFHELNGKMVEVKRA 767 R FE++G + + ++ D + F+ + EDA++ GK++ VK + Sbjct: 95 RAKFEEYGPVVECDIVKD--------YAFVHMERVEDAMEAISGLDNTAFQGKLMSVKLS 146 Query: 768 VPK-ELSPGPSMRS---PAGGINYVMNRANSFLNG-YTQGYSPSPVGGYGMRMDA---RF 923 + +PG R+ G + NG Y +G PS G +R D+ R Sbjct: 147 TSRLRTAPGMGERTGCYRCGQEGHWSKECPLDQNGSYREG--PSSEGFGPVRFDSGGDRG 204 Query: 924 GLLSGGRSSYPSFGGGYGIGMNFDPGMN---PGIGGSSNFNNSVQYG----------RQI 1064 G S P++ G + F G PG G + F +++ YG + Sbjct: 205 RGFHRGFSGEPAYAGSFAPSHGFTRGAGYAVPGYGRGAGFESAMGYGMPAGYGVGADNSM 264 Query: 1065 NPYYSGNSGRYNSNISYGG 1121 P Y + S ++Y G Sbjct: 265 APVYGSEAAYGTSGMAYPG 283
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 486 Score = 62.8 bits (151), Expect = 5e-09 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 3/192 (1%) Frame = +3 Query: 150 PQDPRQPARDPFPGSTGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEA 329 P +QP P G + + + DA KLF+G I + E L+ FE++G++ E Sbjct: 17 PPQQQQPRACPMSGPEPPAQQSDSMKDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYEL 76 Query: 330 VIMRDRATGRARGFGFIVFA--DPAV-AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXX 500 +++DR TG +G F+ + D A+ A+ + E+ + G M + P D + Sbjct: 77 TVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPG-MARPIQVKPADSES----- 130 Query: 501 XXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFI 680 +K+FVG L+ +E + + F+ FG+I + V+ + +G F+ Sbjct: 131 ---------RGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGS-SKGCAFV 180 Query: 681 TYDSEDAVDKAL 716 + S A+ Sbjct: 181 KFSSHAEAQAAI 192 Score = 43.5 bits (101), Expect = 0.003 Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 6/98 (6%) Frame = +3 Query: 210 EPEPEMEADAG----KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGF 377 +P P ++ G LFI + + ++ L + F +G ++ + + DRAT +++ FGF Sbjct: 387 QPPPILQQREGPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGF 446 Query: 378 IVFADPAVAERVI--MEKHMIDGRMVEAKKAVPRDDQQ 485 + F +P+ A+ I M I + ++ + P+D Q Sbjct: 447 VSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDTTQ 484 Score = 32.3 bits (72), Expect = 7.1 Identities = 18/73 (24%), Positives = 33/73 (45%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + + F FG I V D T + + FGF+++D+ + A+ Sbjct: 403 LFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAI--- 459 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 460 -QAMNGFQIGMKR 471
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 62.4 bits (150), Expect = 6e-09 Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 20/264 (7%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 +F+G +S + + ++ F +G++ +A +++D ATG+++G+GF+ F + AE I M Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158 Query: 420 EKHMIDGRMVEA-----KKAVPRDDQQ-ALXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 + GR + K P+ Q+ + ++ GG+AS +T+ Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 218 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE-- 755 R F FG I ++ V + +G+ F+ + + ++ A+ +NG +E Sbjct: 219 QLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIV----SVNGTTIEGH 268 Query: 756 -VKRAVPKELSPGPSMRSPAGGINY--------VMNRANSFLNGYTQGYSPSPVGGYGMR 908 VK KE P M ++Y V + G+ P G YG Sbjct: 269 VVKCYWGKE---SPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 325 Query: 909 MDAR-FGLLSGGRSSYPSFGGGYG 977 + + FG+ +S ++ GG+G Sbjct: 326 WNQQGFGV---DQSPSAAWMGGFG 346
>Q5SZQ8:CELF3_HUMAN CUG-BP- and ETR-3-like factor 3 - Homo sapiens (Human)| Length = 465 Score = 62.0 bits (149), Expect = 8e-09 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 5/173 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA--DPAV 401 E DA KLF+G I E L+ FE++G + E +++D+ TG +G F+ + D A+ Sbjct: 3 EPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSAL 62 Query: 402 -AERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + E+ + G R ++ K P D + +K+FVG L Sbjct: 63 KAQSALHEQKTLPGMNRPIQVK---PADSES--------------RGEDRKLFVGMLGKQ 105 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH 731 T+ D R FE FGTI + V+ + +G F+ + + A +A T H Sbjct: 106 QTDEDVRKMFEPFGTIDECTVLRGPD-GTSKGCAFVKFQTH-AEAQAAINTLH 156 Score = 47.4 bits (111), Expect = 2e-04 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%) Frame = +3 Query: 126 WPLRLPCLPQDPRQPARDPFPGSTGWK*EPEPEMEA------DAGKLFIGGISWDTNEDR 287 + L P PQ P A+ P P + + + + + D +FI + + + Sbjct: 336 YSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSE 395 Query: 288 LREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--MEKHMIDGRMVEAKK 461 + + F +G V+ A + DRAT +++ FGF+ F +PA A+ I M I + ++ + Sbjct: 396 ILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQL 455 Query: 462 AVPRD 476 P+D Sbjct: 456 KRPKD 460
>Q08E07:CELF3_BOVIN CUG-BP- and ETR-3-like factor 3 - Bos taurus (Bovine)| Length = 461 Score = 62.0 bits (149), Expect = 8e-09 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 5/173 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA--DPAV 401 E DA KLF+G I E L+ FE++G + E +++D+ TG +G F+ + D A+ Sbjct: 3 EPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSAL 62 Query: 402 -AERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + E+ + G R ++ K P D + +K+FVG L Sbjct: 63 KAQSALHEQKTLPGMNRPIQVK---PADSES--------------RGEDRKLFVGMLGKQ 105 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH 731 T+ D R FE FGTI + V+ + +G F+ + + A +A T H Sbjct: 106 QTDEDVRKMFEPFGTIDECTVLRGPD-GTSKGCAFVKFQTH-AEAQAAINTLH 156 Score = 48.5 bits (114), Expect = 1e-04 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 5/122 (4%) Frame = +3 Query: 126 WPLRLPCLPQDPRQPARDPFPGSTGWK*EPEPEMEA---DAGKLFIGGISWDTNEDRLRE 296 + L P PQ P A+ P P + + + + + D +FI + + + + + Sbjct: 335 YSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQ 394 Query: 297 YFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--MEKHMIDGRMVEAKKAVP 470 F +G V+ A + DRAT +++ FGF+ F +PA A+ I M I + ++ + P Sbjct: 395 MFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRP 454 Query: 471 RD 476 +D Sbjct: 455 KD 456
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea| mays (Maize) Length = 157 Score = 61.6 bits (148), Expect = 1e-08 Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 3/150 (2%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 + FVGGLA + F +G I D V+ D T R RGFGF+T+ SE+++ A+ Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAI-- 66 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 +NGK ++ + ++ S GG Y R G + GGYG Sbjct: 67 --ENMNGKELDGRNIT---VNQAQSRGGGGGGGGYGGGRGGGGYGGGRRDGGYGGGGGYG 121 Query: 903 MRMDARFGLLSGG---RSSYPSFGGGYGIG 983 R + G GG GGGYG G Sbjct: 122 GRREGGGGGYGGGGGYGGRREGGGGGYGGG 151 Score = 60.8 bits (146), Expect = 2e-08 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 + F+GG++W T+ + L F YGE++++ ++ DR TGR+RGFGF+ F+ I Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68 Query: 417 MEKHMIDGRMVEAKKAVPR 473 M +DGR + +A R Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 61.2 bits (147), Expect = 1e-08 Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Frame = +3 Query: 237 AGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI 416 +G +FI + D + L + F +G+++ + I D G+++GFGF+ F + A+ I Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAI 183 Query: 417 --MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADF 590 + +++G+ + + R ++ + ++V + S T+ F Sbjct: 184 DALNGMLLNGQEIYVAPHLSRKERDS--------QLEETKAHYTNLYVKNINSETTDEQF 235 Query: 591 RTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALFKTFHELNGKMVEVKRA 767 + F +FG I + D + + +GFGF+ Y+ EDAV ELNG+ + V RA Sbjct: 236 QELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294 Query: 768 VPK 776 K Sbjct: 295 QKK 297 Score = 60.5 bits (145), Expect = 2e-08 Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 5/192 (2%) Frame = +3 Query: 222 EMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA--DP 395 E +A L++ I+ +T +++ +E F K+G +V A + +D A G+ +GFGF+ + + Sbjct: 213 ETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKD-ADGKLKGFGFVNYEKHED 271 Query: 396 AVAERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTK--KIFVGGLAS 569 AV + ++G + +A ++++ + + + +FV L Sbjct: 272 AVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDD 331 Query: 570 TVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHEL-NGK 746 +V + F +GTIT VM N + +GFGF+ + + + KA+ + ++ GK Sbjct: 332 SVDDEKLEEEFAPYGTITSAKVMRTEN-GKSKGFGFVCFSTPEEATKAITEKNQQIVAGK 390 Query: 747 MVEVKRAVPKEL 782 + V A K++ Sbjct: 391 PLYVAIAQRKDV 402
>Q8N6W0:CELF5_HUMAN CUG-BP- and ETR-3-like factor 5 - Homo sapiens (Human)| Length = 485 Score = 61.2 bits (147), Expect = 1e-08 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 3/181 (1%) Frame = +3 Query: 210 EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA 389 +P+ + DA KLF+G I +E L+ FE++G + E +++D TG +G F+ + Sbjct: 35 QPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYC 94 Query: 390 --DPAV-AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGG 560 D A+ A+ + E+ + G M + P D + R +K+FVG Sbjct: 95 ARDSAIKAQTALHEQKTLPG-MARPIQVKPADSES-------------RGGRDRKLFVGM 140 Query: 561 LASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELN 740 L +E D F+ FG I + V+ + +G F+ + S A+ H L+ Sbjct: 141 LNKQQSEEDVLRLFQPFGVIDECTVLRGPDGS-SKGCAFVKFSSHTEAQAAI----HALH 195 Query: 741 G 743 G Sbjct: 196 G 196 Score = 41.6 bits (96), Expect = 0.012 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 LFI + + + L + F +G ++ + + DRAT +++ FGF+ F +PA A+ I M Sbjct: 402 LFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAM 461 Query: 420 EKHMIDGRMVEAKKAVPRD 476 I + ++ + P+D Sbjct: 462 NGFQIGMKRLKVQLKRPKD 480 Score = 32.3 bits (72), Expect = 7.1 Identities = 18/73 (24%), Positives = 33/73 (45%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + + F FG I V D T + + FGF+++D+ + A+ Sbjct: 402 LFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAI--- 458 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 459 -QAMNGFQIGMKR 470
>Q8CIN6:CELF3_MOUSE CUG-BP- and ETR-3-like factor 3 - Mus musculus (Mouse)| Length = 465 Score = 61.2 bits (147), Expect = 1e-08 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 5/173 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA--DPAV 401 E DA KLF+G I E L+ FE++G + E +++D+ TG +G F+ + D A+ Sbjct: 3 EPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSAL 62 Query: 402 -AERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + E+ + G R ++ K P D + +K+FVG L Sbjct: 63 KAQSALHEQKTLPGMNRPIQVK---PADSES---------------RGDRKLFVGMLGKQ 104 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH 731 T+ D R FE FGTI + V+ + +G F+ + + A +A T H Sbjct: 105 QTDEDVRKMFEPFGTIDECTVLRGPD-GTSKGCAFVKFQTH-AEAQAAINTLH 155 Score = 47.0 bits (110), Expect = 3e-04 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 9/126 (7%) Frame = +3 Query: 126 WPLRLPCLPQDPRQPARDPFPGSTGWK*EPEPEMEA-------DAGKLFIGGISWDTNED 284 + L P PQ P A+ P P + + + + + D +FI + + + Sbjct: 335 YSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDS 394 Query: 285 RLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--MEKHMIDGRMVEAK 458 + + F +G V+ A + DRAT +++ FGF+ F +PA A+ I M I + ++ + Sbjct: 395 EILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQ 454 Query: 459 KAVPRD 476 P+D Sbjct: 455 LKRPKD 460
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 60.8 bits (146), Expect = 2e-08 Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 3/83 (3%) Frame = +3 Query: 225 MEAD-AGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 +EAD GKLFIGG++ +TNE L+ F K+G + E ++++DR T ++RGF FI F +PA Sbjct: 2 VEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPAD 60 Query: 402 AERVI--MEKHMIDGRMVEAKKA 464 A+ M + G+ ++ ++A Sbjct: 61 AKNAAKDMNGKSLHGKAIKVEQA 83 Score = 55.1 bits (131), Expect = 1e-06 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 11/153 (7%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALF 719 K+F+GGL E + F + G I++V+++ D T + RGF FIT+++ DA + A Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKD-RTSKSRGFAFITFENPADAKNAAKD 67 Query: 720 KTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMN---RANSFLNGYTQGYSPS-- 884 L+GK ++V++A G R PA N + R+ G T+G+ PS Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSGSLRSARGSRGGTRGWLPSHE 127 Query: 885 ---PVGGY--GMRMDARFGLLSGGRSSYPSFGG 968 GGY ++M GL+ R GG Sbjct: 128 GHLDDGGYTPDLKMSYSRGLIPVKRGPSSRSGG 160
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 60.5 bits (145), Expect = 2e-08 Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 3/171 (1%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 P E DA +++GG+ +E L E F + G VV + +DR TG+ +G+GF+ F Sbjct: 5 PISERNQDA-TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLS 63 Query: 393 PAVAERVIMEKHMID--GRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLA 566 A+ I +MI G+ + KA + + IF+G L Sbjct: 64 EEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVG---------------ANIFIGNLD 108 Query: 567 STVTEADFRTYFEQFGTITDV-VVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 + E F FG I +M D +T +G+ FI + S DA D A+ Sbjct: 109 PEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 159
>Q5M9F1:RBM34_RAT RNA-binding protein 34 - Rattus norvegicus (Rat)| Length = 428 Score = 60.5 bits (145), Expect = 2e-08 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 7/218 (3%) Frame = +3 Query: 147 LPQDPRQPARDPFPGSTGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVE 326 L +D RQ + P PE E + +F+G + N+ +L+ +F++YG+V Sbjct: 160 LNEDGRQRTKVPL--------NPEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQVES 211 Query: 327 AVIMRDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMV-----EAKKAVPRDDQQ-A 488 +R R+ A G A A+ + ++ I+ +V A KA+ R+ Q A Sbjct: 212 ---VRFRSVMPAEGTLSKKLA--AIKRKFHPDQKSINAYVVFKEERAAAKALQRNGAQIA 266 Query: 489 LXXXXXXXXXXXXXXRTKK-IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPR 665 R K+ +FVG L V E+ +F G+I V ++ + T R Sbjct: 267 EGFRIRVDLASETASRDKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGR 326 Query: 666 GFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 GFG++ +++ DAV AL EL G+ + V R+V KE Sbjct: 327 GFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVNKE 364
>Q7ZWM3:CEL3B_XENLA CUG-BP- and ETR-3-like factor 3-B - Xenopus laevis (African clawed| frog) Length = 462 Score = 60.5 bits (145), Expect = 2e-08 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 5/168 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA---DPA 398 E DA KLFIG I + +E L+ FE++G++ E +++D+ TG +G F+ + Sbjct: 3 EPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESAL 62 Query: 399 VAERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + E+ + G R ++ K P D + +K+FVG L Sbjct: 63 KAQSALHEQKTLPGMNRPIQVK---PADSES--------------RGEDRKLFVGMLGKQ 105 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 T+ D R FE FG I + V+ + +G F+ + + A+ Sbjct: 106 QTDEDVRRMFETFGNIDECTVLRGPD-GTSKGCAFVKFQTHTEAQAAI 152 Score = 39.3 bits (90), Expect = 0.058 Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 +FI + + + + + F +G V+ A + DRAT +++ FGF+ F +P A+ I M Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSM 438 Query: 420 EKHMIDGRMVEAKKAVPRD 476 I + ++ + P+D Sbjct: 439 NGFQIGMKRLKVQLKRPKD 457 Score = 37.0 bits (84), Expect = 0.29 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 IF+ L T+++ F FG + V D T + + FGF+++D+ + A+ Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAI--- 435 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 436 -QSMNGFQIGMKR 447
>Q91579:CEL3A_XENLA CUG-BP- and ETR-3-like factor 3-A - Xenopus laevis (African clawed| frog) Length = 462 Score = 60.5 bits (145), Expect = 2e-08 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 5/168 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA---DPA 398 E DA KLFIG I + +E L+ FE++G++ E +++D+ TG +G F+ + Sbjct: 3 EPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESAL 62 Query: 399 VAERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + E+ + G R ++ K P D + +K+FVG L Sbjct: 63 KAQSALHEQKTLPGMNRPIQVK---PADSES--------------RGEDRKLFVGMLGKQ 105 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 T+ D R FE FG I + V+ + +G F+ + + A+ Sbjct: 106 QTDEDVRRMFEPFGNIDECTVLRGPD-GTSKGCAFVKFQTHTEAQAAI 152 Score = 39.3 bits (90), Expect = 0.058 Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 +FI + + + + + F +G V+ A + DRAT +++ FGF+ F +P A+ I M Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAM 438 Query: 420 EKHMIDGRMVEAKKAVPRD 476 I + ++ + P+D Sbjct: 439 NGFQIGMKRLKVQLKRPKD 457 Score = 36.6 bits (83), Expect = 0.37 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 IF+ L T+++ F FG + V D T + + FGF+++D+ + A+ Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAI--- 435 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 436 -QAMNGFQIGMKR 447
>P08199:NUCL_MESAU Nucleolin - Mesocricetus auratus (Golden hamster)| Length = 714 Score = 59.7 bits (143), Expect = 4e-08 Identities = 67/255 (26%), Positives = 102/255 (40%), Gaps = 4/255 (1%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L + +S+ E+ L+E FEK + + G+++G+ FI FA A+ + Sbjct: 488 LVLSNLSYSATEETLQEVFEK----ATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSC 543 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 K I+GR + + PR A +K +FV GL+ TE + Sbjct: 544 NKMEIEGRTIRLELQGPRGSPNARSQP------------SKTLFVKGLSEDTTEETLKES 591 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH--ELNGKMVEVKRAVP 773 FE G++ +V D T +GFGF+ ++SE+ KA + E++G V + A P Sbjct: 592 FE--GSVRARIVT-DRETGSSKGFGFVDFNSEEDA-KAAKEAMEDGEIDGNKVTLDWAKP 647 Query: 774 KELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSY 953 K GG G G GG+G R F GGR + Sbjct: 648 KGEGGFGGRGGGRGGF------------GGRGGGRGGGRGGFGGRGRGGF----GGRGGF 691 Query: 954 PSFGGGYGIGMNFDP 998 GG G G +F P Sbjct: 692 RGGRGGGGGGGDFKP 706
>Q7TN33:CELF6_MOUSE CUG-BP- and ETR-3-like factor 6 - Mus musculus (Mouse)| Length = 460 Score = 59.7 bits (143), Expect = 4e-08 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 5/171 (2%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA--D 392 P + DA KLF+G I +E L+ FE++G + E +++DR TG +G F+ + D Sbjct: 39 PMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARD 98 Query: 393 PAV-AERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGL 563 A+ A+ + E+ + G R ++ K A +K+FVG L Sbjct: 99 SALKAQSALHEQKTLPGMNRPIQVKPAASE-----------------GRGEDRKLFVGML 141 Query: 564 ASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 E D R F+ FG I + V+ + +G F+ + S+ A+ Sbjct: 142 GKQQGEEDVRRLFQPFGHIEECTVLRSPD-GTSKGCAFVKFGSQGEAQAAI 191 Score = 41.6 bits (96), Expect = 0.012 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Frame = +3 Query: 213 PEPEMEADAG-KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA 389 P+ + E G LFI + + + L + F +G VV A + DRAT +++ FGF+ F Sbjct: 365 PQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFD 424 Query: 390 DPAVAERVI--MEKHMIDGRMVEAKKAVPRD 476 +P A+ I M I + ++ + P+D Sbjct: 425 NPTSAQTAIQAMNGFQIGMKRLKVQLKRPKD 455 Score = 33.9 bits (76), Expect = 2.4 Identities = 18/73 (24%), Positives = 34/73 (46%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L +A+ F FG + V D T + + FGF+++D+ + A+ Sbjct: 377 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAI--- 433 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 434 -QAMNGFQIGMKR 445
>Q96J87:CELF6_HUMAN CUG-BP- and ETR-3-like factor 6 - Homo sapiens (Human)| Length = 481 Score = 59.7 bits (143), Expect = 4e-08 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 5/171 (2%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA--D 392 P + DA KLF+G I +E L+ FE++G + E +++DR TG +G F+ + D Sbjct: 39 PMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARD 98 Query: 393 PAV-AERVIMEKHMIDG--RMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGL 563 A+ A+ + E+ + G R ++ K A +K+FVG L Sbjct: 99 SALKAQSALHEQKTLPGMNRPIQVKPAASE-----------------GRGEDRKLFVGML 141 Query: 564 ASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 E D R F+ FG I + V+ + +G F+ + S+ A+ Sbjct: 142 GKQQGEEDVRRLFQPFGHIEECTVLRSPD-GTSKGCAFVKFGSQGEAQAAI 191 Score = 41.6 bits (96), Expect = 0.012 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Frame = +3 Query: 213 PEPEMEADAG-KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA 389 P+ + E G LFI + + + L + F +G VV A + DRAT +++ FGF+ F Sbjct: 386 PQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFD 445 Query: 390 DPAVAERVI--MEKHMIDGRMVEAKKAVPRD 476 +P A+ I M I + ++ + P+D Sbjct: 446 NPTSAQTAIQAMNGFQIGMKRLKVQLKRPKD 476 Score = 33.9 bits (76), Expect = 2.4 Identities = 18/73 (24%), Positives = 34/73 (46%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L +A+ F FG + V D T + + FGF+++D+ + A+ Sbjct: 398 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAI--- 454 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 455 -QAMNGFQIGMKR 466
>O01671:SXL_MEGSC Sex-lethal homolog - Megaselia scalaris| Length = 321 Score = 59.3 bits (142), Expect = 5e-08 Identities = 40/157 (25%), Positives = 66/157 (42%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + D + L F G + IMRD TG + G+GF+ F A A R I Sbjct: 80 LIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNL 139 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + I R K + R + L R ++V L+ ++T+ T F Sbjct: 140 NGITVRNKRIKVSFARPGGEQL--------------RDTNLYVTNLSRSITDEQLETIFG 185 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 ++G I ++ D +T PRG FI ++ + +A+ Sbjct: 186 KYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAI 222
>Q6PF35:CEL1B_XENLA CUG-BP- and ETR-3-like factor 1-B - Xenopus laevis (African clawed| frog) Length = 489 Score = 59.3 bits (142), Expect = 5e-08 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 5/174 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIVFADPAV 401 ++D+ K+F+G + +E LRE FE+YG V E ++RDR+ +++G FI F Sbjct: 12 DSDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKA 71 Query: 402 ---AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + ++ G M + P D ++ +K+F+G ++ Sbjct: 72 ALEAQNALHNMKVLPG-MHHPIQMKPADSEK------------NNAVEDRKLFIGMVSKK 118 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 E D RT F QFG I + ++ + RG FIT+ + A+ K H+ Sbjct: 119 CNENDIRTLFSQFGQIEESRILRGPDGM-SRGCAFITFTTRSMAQMAI-KAMHQ 170 Score = 35.8 bits (81), Expect = 0.64 Identities = 21/73 (28%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG I V D T + FGFI+YD+ + A+ Sbjct: 406 LFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQTNLSKCFGFISYDNPVSAQAAI--- 462 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 463 -QSMNGFQIGMKR 474
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 58.9 bits (141), Expect = 7e-08 Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 8/178 (4%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 +F+G +S + + ++ F +G + +A +++D ATG+++G+GF+ F + AE I M Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 420 EKHMIDGRMVEA-----KKAVPRDDQQA-LXXXXXXXXXXXXXXRTKKIFVGGLASTVTE 581 + GR + K P+ ++ ++ GG+ S +TE Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTE 227 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 R F FG I ++ V D +G+ F+ + S ++ A+ +NG +E Sbjct: 228 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIV----SVNGTTIE 275
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 58.5 bits (140), Expect = 9e-08 Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 8/178 (4%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 +F+G +S + ++ F +G + +A +++D ATG+++G+GF+ F + AE I M Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 420 EKHMIDGRMVEA-----KKAVPRDDQQALXXXXXXXXXXXXXXRTK-KIFVGGLASTVTE 581 + GR + K P+ ++ + ++ GG+ S +TE Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 227 Query: 582 ADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVE 755 R F FG I ++ V D +G+ F+ ++S ++ A+ +NG +E Sbjct: 228 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIV----SVNGTTIE 275
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 58.5 bits (140), Expect = 9e-08 Identities = 68/269 (25%), Positives = 102/269 (37%), Gaps = 6/269 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L + +S+ E+ L+E FEK + + G+++G+ FI FA A+ + Sbjct: 491 LVLSNLSYSATEETLQEVFEK----ATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSC 546 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 K I+GR + + PR A +K +FV GL+ TE + Sbjct: 547 NKMEIEGRTIRLELQGPRGSPNARSQP------------SKTLFVKGLSEDTTEETLKES 594 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH--ELNGKMVEVKRAVP 773 FE G++ +V D T +GFGF+ ++SE+ KA + E++G V + A P Sbjct: 595 FE--GSVRARIVT-DRETGSSKGFGFVDFNSEEDA-KAAKEAMEDGEIDGNKVTLDWAKP 650 Query: 774 KELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDAR--FGLLSGGRS 947 K GG+G R R FG GGR Sbjct: 651 K------------------------------------GEGGFGGRGGGRGGFGGRGGGRG 674 Query: 948 SYPSFGGGYGIGMNFDPGMNPGIGGSSNF 1034 FGG G G G GG +F Sbjct: 675 GRGGFGGRGRGGFGGRGGFRGGRGGGGDF 703
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 58.5 bits (140), Expect = 9e-08 Identities = 72/285 (25%), Positives = 113/285 (39%), Gaps = 6/285 (2%) Frame = +3 Query: 195 TGWK*EPEPEM---EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRAR 365 TG K + E + E ++ L + +S+ +E+ L+E F+K ++ M GR + Sbjct: 443 TGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELFKK----ATSIKMPQNNQGRPK 498 Query: 366 GFGFIVFADPAVAERVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRT 539 G+ F+ F A+ + I+GR + + + P + + ++ Sbjct: 499 GYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKGNMNARGGFNQ------QS 552 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKAL 716 K +FV GL+ TE R FE G+I+ +V D +T +GFGF+ + S EDA Sbjct: 553 KTLFVRGLSEDTTEETLRESFE--GSISARIVT-DRDTGSSKGFGFVDFSSPEDAKAAKE 609 Query: 717 FKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGG 896 E++G V + A PK R F G+ GG Sbjct: 610 AMEDGEIDGNKVTLDFAKPKG----------------EFQRGGGFGGGF---------GG 644 Query: 897 YGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSN 1031 G R G GGR + GGG G G G G GG + Sbjct: 645 RGGR-----GGRGGGRGGFGGRGGGRGFG-GRGGGFRGGRGGGGD 683
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 58.2 bits (139), Expect = 1e-07 Identities = 50/171 (29%), Positives = 73/171 (42%), Gaps = 3/171 (1%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 P E DA +++GG+ +E L E + G VV + +DR T +GFGF+ F Sbjct: 5 PIVERNQDA-TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMG 63 Query: 393 PAVAERVIMEKHMID--GRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLA 566 A+ I +MI G+ ++ KA + + IFVG L Sbjct: 64 EEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVG---------------ANIFVGNLD 108 Query: 567 STVTEADFRTYFEQFGTITDV-VVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 V E F FG I V +M D ++ +GF FI + S +A D AL Sbjct: 109 PEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 159
>Q8C5L7:RBM34_MOUSE RNA-binding protein 34 - Mus musculus (Mouse)| Length = 375 Score = 58.2 bits (139), Expect = 1e-07 Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 7/196 (3%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 PE E + +F+G + N+ +L+ +F++YG+V E+V R G + Sbjct: 180 PEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQV-ESVRFRSVMPAE----GTLTKKL 234 Query: 393 PAVAERVIMEKHMIDGRMV-----EAKKAVPRDDQQ-ALXXXXXXXXXXXXXXRTKK-IF 551 A+ + ++ I+ +V A KA+ R+ Q A R K+ +F Sbjct: 235 AAIKRKFHPDQKSINAYVVFKDESAAAKALQRNGAQIAEGFRIRVDLASETASRDKRSVF 294 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH 731 VG L + ++ +F G+I V ++ + T RGFG++ +++ DAV AL Sbjct: 295 VGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNS 354 Query: 732 ELNGKMVEVKRAVPKE 779 EL G+ + V R+V KE Sbjct: 355 ELMGRKLRVMRSVNKE 370
>Q924M5:BOLL_MOUSE Protein boule-like - Mus musculus (Mouse)| Length = 281 Score = 58.2 bits (139), Expect = 1e-07 Identities = 26/65 (40%), Positives = 44/65 (67%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 ++F+GGI + TNE+ LR++F +YG V E I+ DRA G ++G+GFI F A++++ E Sbjct: 34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFITFETQEDAQKILQE 92 Query: 423 KHMID 437 ++ Sbjct: 93 AEKLN 97 Score = 50.1 bits (118), Expect = 3e-05 Identities = 30/93 (32%), Positives = 52/93 (55%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 +IFVGG+ E D R +F Q+G++ +V ++ D +G+GFIT+++++ K L + Sbjct: 34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQKIL-Q 91 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGI 821 +LN K K+L+ GP++R GI Sbjct: 92 EAEKLNYK--------DKKLNIGPAIRKQQVGI 116
>P62997:TRA2B_RAT Splicing factor, arginine/serine-rich 10 - Rattus norvegicus (Rat)| Length = 288 Score = 57.8 bits (138), Expect = 2e-07 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALFKTF 728 V GL+ TE D R F ++G I DV ++YD ++R RGF F+ +++ +DA + Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 729 HELNGKMVEVKRAV---PKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 EL+G+ + V ++ P +PG M P G + R + + GY +GY Sbjct: 182 MELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSS---RRRDYYDRGYDRGY 230 Score = 43.9 bits (102), Expect = 0.002 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPAVAERVIM 419 L + G+S T E LRE F KYG + + I+ D+ + R+RGF F+ F D A + Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179 Query: 420 EKHMIDGRMVEAKKAVPR 473 +DGR + ++ + Sbjct: 180 NGMELDGRRIRVDFSITK 197
>P62996:TRA2B_MOUSE Splicing factor, arginine/serine-rich 10 - Mus musculus (Mouse)| Length = 288 Score = 57.8 bits (138), Expect = 2e-07 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALFKTF 728 V GL+ TE D R F ++G I DV ++YD ++R RGF F+ +++ +DA + Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 729 HELNGKMVEVKRAV---PKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 EL+G+ + V ++ P +PG M P G + R + + GY +GY Sbjct: 182 MELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSS---RRRDYYDRGYDRGY 230 Score = 43.9 bits (102), Expect = 0.002 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPAVAERVIM 419 L + G+S T E LRE F KYG + + I+ D+ + R+RGF F+ F D A + Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179 Query: 420 EKHMIDGRMVEAKKAVPR 473 +DGR + ++ + Sbjct: 180 NGMELDGRRIRVDFSITK 197
>P62995:TRA2B_HUMAN Splicing factor, arginine/serine-rich 10 - Homo sapiens (Human)| Length = 288 Score = 57.8 bits (138), Expect = 2e-07 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALFKTF 728 V GL+ TE D R F ++G I DV ++YD ++R RGF F+ +++ +DA + Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 729 HELNGKMVEVKRAV---PKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 EL+G+ + V ++ P +PG M P G + R + + GY +GY Sbjct: 182 MELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSS---RRRDYYDRGYDRGY 230 Score = 43.9 bits (102), Expect = 0.002 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPAVAERVIM 419 L + G+S T E LRE F KYG + + I+ D+ + R+RGF F+ F D A + Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179 Query: 420 EKHMIDGRMVEAKKAVPR 473 +DGR + ++ + Sbjct: 180 NGMELDGRRIRVDFSITK 197
>Q3ZBT6:TRA2B_BOVIN Splicing factor, arginine/serine-rich 10 - Bos taurus (Bovine)| Length = 288 Score = 57.8 bits (138), Expect = 2e-07 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDS-EDAVDKALFKTF 728 V GL+ TE D R F ++G I DV ++YD ++R RGF F+ +++ +DA + Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 729 HELNGKMVEVKRAV---PKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 EL+G+ + V ++ P +PG M P G + R + + GY +GY Sbjct: 182 MELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSS---RRRDYYDRGYDRGY 230 Score = 43.9 bits (102), Expect = 0.002 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPAVAERVIM 419 L + G+S T E LRE F KYG + + I+ D+ + R+RGF F+ F D A + Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179 Query: 420 EKHMIDGRMVEAKKAVPR 473 +DGR + ++ + Sbjct: 180 NGMELDGRRIRVDFSITK 197
>Q99069:GRP1_SORBI Glycine-rich RNA-binding protein 1 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 142 Score = 57.8 bits (138), Expect = 2e-07 Identities = 47/144 (32%), Positives = 64/144 (44%) Frame = +3 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 F +G + + ++ D TQR RGFGF+T+ +E+A+ A+ +NGK ++ + E Sbjct: 7 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAI----EGMNGKELDGRNITVNE 62 Query: 780 LSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLLSGGRSSYPS 959 + R GG Y R GY G GGYG G GGR Y Sbjct: 63 -AQSRGGRGGGGGGGYGGGRGGG--GGY--GRRDGGGGGYG----GGGGGYGGGRGGYG- 112 Query: 960 FGGGYGIGMNFDPGMNPGIGGSSN 1031 GGGYG G G + G GG N Sbjct: 113 -GGGYGGGGGGYGGGSRGGGGYGN 135 Score = 45.8 bits (107), Expect = 6e-04 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Frame = +3 Query: 288 LREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--MEKHMIDGRMVEAKK 461 L F YGEV+E+ I+ DR T R+RGFGF+ F+ I M +DGR + + Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNE 62 Query: 462 AVPR 473 A R Sbjct: 63 AQSR 66
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 57.4 bits (137), Expect = 2e-07 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 11/189 (5%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 LF+G + ++L E F + G V + ++ ++ + RGFG++ F+ +R + E Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 426 HMIDG---RMVEAKKAV-------PRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTV 575 +G + AKK + +++ + ++ + L+ Sbjct: 66 TTFEGCKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAKVADKKARLIIRNLSFKC 125 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-FKTFHELNGKMV 752 +E D +T F QFG + +V + + + RGFGF+ + + KAL E+ G+ V Sbjct: 126 SEDDLKTVFAQFGAVLEVNIPRKPD-GKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTV 184 Query: 753 EVKRAVPKE 779 V AV K+ Sbjct: 185 AVDWAVAKD 193 Score = 33.9 bits (76), Expect = 2.4 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 7/87 (8%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 K +F+ L+ E + +QFG + V ++ +T+ +G F + +++A K L Sbjct: 335 KTVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLL 394 Query: 720 KTFHE-------LNGKMVEVKRAVPKE 779 E L+G+ ++V AV ++ Sbjct: 395 AASPENEAGGLKLDGRQLKVDLAVTRD 421
>Q804A9:DAZL_CHICK Deleted in azoospermia-like - Gallus gallus (Chicken)| Length = 289 Score = 57.4 bits (137), Expect = 2e-07 Identities = 28/83 (33%), Positives = 48/83 (57%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 PE + +F+GGI NE +R YFE+YG V E I+ DR TG ++G+GF+ F D Sbjct: 29 PEGKIMPNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNV 87 Query: 399 VAERVIMEKHMIDGRMVEAKKAV 467 ++++ + + G+ ++ A+ Sbjct: 88 DVQKIVESQISVHGKRLKLGPAI 110 Score = 50.1 bits (118), Expect = 3e-05 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +FVGG+ + EA+ R+YFEQ+GT+ +V ++ D T +G+GF+++ D VD Sbjct: 38 VFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITD-RTGVSKGYGFVSF--LDNVDVQ---- 90 Query: 726 FHELNGKMVEVKRAV-PKELSPGPSMRSPAGGINYVMNRANSF 851 K+VE + +V K L GP++R +Y+ R +F Sbjct: 91 ------KIVESQISVHGKRLKLGPAIRKQQNLCSYMQPRPLAF 127
>Q8WP23:BOLL_MACFA Protein boule-like - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 283 Score = 57.4 bits (137), Expect = 2e-07 Identities = 25/65 (38%), Positives = 43/65 (66%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 ++F+GGI + TNE LR++F +YG V E I+ DRA G ++G+GF+ F A++++ E Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQKILQE 92 Query: 423 KHMID 437 ++ Sbjct: 93 AEKLN 97 Score = 51.2 bits (121), Expect = 1e-05 Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 2/113 (1%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 +IFVGG+ E+D R +F Q+G++ +V ++ D +G+GF+T+++++ K L + Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQKIL-Q 91 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGI--NYVMNRANSFLNGYTQGY 875 +LN K K+L+ GP++R GI + +M A + + GY Sbjct: 92 EAEKLNYK--------DKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGY 136
>Q8N9W6:BOLL_HUMAN Protein boule-like - Homo sapiens (Human)| Length = 283 Score = 57.4 bits (137), Expect = 2e-07 Identities = 25/65 (38%), Positives = 43/65 (66%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 ++F+GGI + TNE LR++F +YG V E I+ DRA G ++G+GF+ F A++++ E Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQKILQE 92 Query: 423 KHMID 437 ++ Sbjct: 93 AEKLN 97 Score = 51.2 bits (121), Expect = 1e-05 Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 2/113 (1%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 +IFVGG+ E+D R +F Q+G++ +V ++ D +G+GF+T+++++ K L + Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQKIL-Q 91 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGI--NYVMNRANSFLNGYTQGY 875 +LN K K+L+ GP++R GI + +M A + + GY Sbjct: 92 EAEKLNYK--------DKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGY 136
>P40561:SGN1_YEAST RNA-binding protein SGN1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 250 Score = 57.0 bits (136), Expect = 3e-07 Identities = 33/113 (29%), Positives = 51/113 (45%) Frame = +3 Query: 537 TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 ++ IFVG + VT +F+ G I + ++YD NT P+G+G+I ++S +KAL Sbjct: 63 SRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKAL 122 Query: 717 FKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGY 875 EL GK + V R R+ G N N N + + Y Sbjct: 123 QLNGGELKGKKIAVSR-----------KRTNIPGFNRHYNSQNQYFQQWQWNY 164 Score = 54.3 bits (129), Expect = 2e-06 Identities = 23/80 (28%), Positives = 48/80 (60%) Frame = +3 Query: 222 EMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 ++EAD+ +F+G I+ D +++ ++F+ G++ ++ DR TG +G+G+I F PA Sbjct: 58 QLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAY 117 Query: 402 AERVIMEKHMIDGRMVEAKK 461 E+ + ++G ++ KK Sbjct: 118 REKAL----QLNGGELKGKK 133
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 56.6 bits (135), Expect = 3e-07 Identities = 63/286 (22%), Positives = 107/286 (37%), Gaps = 8/286 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + D + L F G + IMRD TG + G+ F+ FA ++R I Sbjct: 112 LIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSL 171 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + I R K + R +++ + ++V L T+T+ T F Sbjct: 172 NGITVRNKRLKVSYARPGGESI--------------KDTNLYVTNLPRTITDDQLDTIFG 217 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKELS 785 ++G I ++ D T +PRG F+ ++ + +A+ + +P+ S Sbjct: 218 KYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAI-----------SALNNVIPEGAS 266 Query: 786 PGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFGLL-SGGRSSYPSF 962 ++R A Q Y ++ GL+ GG Sbjct: 267 QPLTVR-----------LAEEHGKAKAQHYM------------SQLGLIGGGGGGGGGGG 303 Query: 963 GGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQ-------INPYYS 1079 GGG G+G P MN G +NN V GRQ ++PY++ Sbjct: 304 GGGGGMGGPPPPPMNMG------YNNMVHRGRQNKSRFQKMHPYHN 343
>Q9BDY9:RBM4_RABIT RNA-binding protein 4 - Oryctolagus cuniculus (Rabbit)| Length = 359 Score = 56.6 bits (135), Expect = 3e-07 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 1/192 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIG + + E +R FE+YG+V+E I+++ +GF+ D AE I Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 423 KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYF 602 H V ++ +A + K+ VG ++ T T + R F Sbjct: 55 LHHYKLHGVNINVEASKNKSKA----------------STKLHVGNISPTCTNQELRAKF 98 Query: 603 EQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 E++G + + ++ D + F+ + +EDAV+ E GK + V+ + + Sbjct: 99 EEYGPVIECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR- 149 Query: 780 LSPGPSMRSPAG 815 L P M +G Sbjct: 150 LRTAPGMGDQSG 161
>Q8C7Q4:RBM4_MOUSE RNA-binding protein 4 - Mus musculus (Mouse)| Length = 361 Score = 56.6 bits (135), Expect = 3e-07 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 1/192 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIG + + E +R FE+YG+V+E I+++ +GF+ D AE I Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 423 KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYF 602 H V ++ +A + K+ VG ++ T T + R F Sbjct: 55 LHHYKLHGVNINVEASKNKSKA----------------STKLHVGNISPTCTNQELRAKF 98 Query: 603 EQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 E++G + + ++ D + F+ + +EDAV+ E GK + V+ + + Sbjct: 99 EEYGPVIECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR- 149 Query: 780 LSPGPSMRSPAG 815 L P M +G Sbjct: 150 LRTAPGMGDQSG 161
>Q64LC9:RBM4B_RAT RNA-binding protein 4B - Rattus norvegicus (Rat)| Length = 357 Score = 56.6 bits (135), Expect = 3e-07 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 1/192 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIG + + E +R FE+YG+V+E I+++ +GF+ D AE I Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 423 KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYF 602 H V ++ +A + K+ VG ++ T T + R F Sbjct: 55 LHHYKLHGVNINVEASKNKSKA----------------STKLHVGNISPTCTNQELRAKF 98 Query: 603 EQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 E++G + + ++ D + F+ + +EDAV+ E GK + V+ + + Sbjct: 99 EEYGPVIECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR- 149 Query: 780 LSPGPSMRSPAG 815 L P M +G Sbjct: 150 LRTAPGMGDQSG 161
>Q06AT9:RBM4B_PIG RNA-binding protein 4B - Sus scrofa (Pig)| Length = 359 Score = 56.6 bits (135), Expect = 3e-07 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 1/192 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIG + + E +R FE+YG+V+E I+++ +GF+ D AE I Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 423 KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYF 602 H V ++ +A + K+ VG ++ T T + R F Sbjct: 55 LHHYKLHGVNINVEASKNKSKA----------------STKLHVGNISPTCTNQELRAKF 98 Query: 603 EQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 E++G + + ++ D + F+ + +EDAV+ E GK + V+ + + Sbjct: 99 EEYGPVIECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR- 149 Query: 780 LSPGPSMRSPAG 815 L P M +G Sbjct: 150 LRTAPGMGDQSG 161
>Q8VE92:RBM4B_MOUSE RNA-binding protein 4B - Mus musculus (Mouse)| Length = 357 Score = 56.6 bits (135), Expect = 3e-07 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 1/192 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIG + + E +R FE+YG+V+E I+++ +GF+ D AE I Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 423 KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYF 602 H V ++ +A + K+ VG ++ T T + R F Sbjct: 55 LHHYKLHGVNINVEASKNKSKA----------------STKLHVGNISPTCTNQELRAKF 98 Query: 603 EQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 E++G + + ++ D + F+ + +EDAV+ E GK + V+ + + Sbjct: 99 EEYGPVIECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR- 149 Query: 780 LSPGPSMRSPAG 815 L P M +G Sbjct: 150 LRTAPGMGDQSG 161
>Q9BQ04:RBM4B_HUMAN RNA-binding protein 4B - Homo sapiens (Human)| Length = 359 Score = 56.6 bits (135), Expect = 3e-07 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 1/192 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIG + + E +R FE+YG+V+E I+++ +GF+ D AE I Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 423 KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYF 602 H V ++ +A + K+ VG ++ T T + R F Sbjct: 55 LHHYKLHGVNINVEASKNKSKA----------------STKLHVGNISPTCTNQELRAKF 98 Query: 603 EQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 E++G + + ++ D + F+ + +EDAV+ E GK + V+ + + Sbjct: 99 EEYGPVIECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR- 149 Query: 780 LSPGPSMRSPAG 815 L P M +G Sbjct: 150 LRTAPGMGDQSG 161
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 56.6 bits (135), Expect = 3e-07 Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 14/223 (6%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 E E + +F+G + N+ +L+ +F++YG+ +E+V R G + Sbjct: 177 EEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQ-IESVRFRSLIPAE----GTLSKKLA 231 Query: 396 AVAERVIMEKHMIDGRMV-----EAKKAVPRDDQQALXXXXXXXXXXXXXXRTKK--IFV 554 A+ ++ ++ I+ +V A +A+ R+ Q K +FV Sbjct: 232 AIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRSVFV 291 Query: 555 GGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 G L V E+ +F G+I V ++ D T +GFG++ +++ D+V AL E Sbjct: 292 GNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSE 351 Query: 735 LNGKMVEVKRAVPKE----LSPGPSMRS---PAGGINYVMNRA 842 L G+ + V R+V KE + P +++ P G+N+ A Sbjct: 352 LMGRKLRVMRSVNKEKFKQQNSNPRLKNVSKPKQGLNFTSKTA 394
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 56.6 bits (135), Expect = 3e-07 Identities = 66/268 (24%), Positives = 101/268 (37%), Gaps = 6/268 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L + +S+ E+ L+E FEK + + G+++G+ FI FA A+ + Sbjct: 490 LVLSNLSYSATEETLQEVFEK----ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 545 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 K I+GR + + PR A +K +FV GL+ TE + Sbjct: 546 NKREIEGRAIRLELQGPRGSPNARSQP------------SKTLFVKGLSEDTTEETLKES 593 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH--ELNGKMVEVKRAVP 773 F+ G++ +V D T +GFGF+ ++SE+ KA + E++G V + A P Sbjct: 594 FD--GSVRARIVT-DRETGSSKGFGFVDFNSEEDA-KAAKEAMEDGEIDGNKVTLDWAKP 649 Query: 774 KELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDAR--FGLLSGGRS 947 K GG+G R R FG GGR Sbjct: 650 K------------------------------------GEGGFGGRGGGRGGFGGRGGGRG 673 Query: 948 SYPSFGGGYGIGMNFDPGMNPGIGGSSN 1031 FGG G G G GG + Sbjct: 674 GRGGFGGRGRGGFGGRGGFRGGRGGGGD 701
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 56.6 bits (135), Expect = 3e-07 Identities = 66/268 (24%), Positives = 101/268 (37%), Gaps = 6/268 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L + +S+ E+ L+E FEK + + G+++G+ FI FA A+ + Sbjct: 489 LVLSNLSYSATEETLQEVFEK----ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 544 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 K I+GR + + PR A +K +FV GL+ TE + Sbjct: 545 NKREIEGRAIRLELQGPRGSPNARSQP------------SKTLFVKGLSEDTTEETLKES 592 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH--ELNGKMVEVKRAVP 773 F+ G++ +V D T +GFGF+ ++SE+ KA + E++G V + A P Sbjct: 593 FD--GSVRARIVT-DRETGSSKGFGFVDFNSEEDA-KAAKEAMEDGEIDGNKVTLDWAKP 648 Query: 774 KELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDAR--FGLLSGGRS 947 K GG+G R R FG GGR Sbjct: 649 K------------------------------------GEGGFGGRGGGRGGFGGRGGGRG 672 Query: 948 SYPSFGGGYGIGMNFDPGMNPGIGGSSN 1031 FGG G G G GG + Sbjct: 673 GRGGFGGRGRGGFGGRGGFRGGRGGGGD 700
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 56.6 bits (135), Expect = 3e-07 Identities = 66/268 (24%), Positives = 101/268 (37%), Gaps = 6/268 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 L + +S+ E+ L+E FEK + + G+++G+ FI FA A+ + Sbjct: 488 LVLSNLSYSATEETLQEVFEK----ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 543 Query: 420 EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTY 599 K I+GR + + PR A +K +FV GL+ TE + Sbjct: 544 NKREIEGRAIRLELQGPRGSPNARSQP------------SKTLFVKGLSEDTTEETLKES 591 Query: 600 FEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH--ELNGKMVEVKRAVP 773 F+ G++ +V D T +GFGF+ ++SE+ KA + E++G V + A P Sbjct: 592 FD--GSVRARIVT-DRETGSSKGFGFVDFNSEEDA-KAAKEAMEDGEIDGNKVTLDWAKP 647 Query: 774 KELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDAR--FGLLSGGRS 947 K GG+G R R FG GGR Sbjct: 648 K------------------------------------GEGGFGGRGGGRGGFGGRGGGRG 671 Query: 948 SYPSFGGGYGIGMNFDPGMNPGIGGSSN 1031 FGG G G G GG + Sbjct: 672 GRGGFGGRGRGGFGGRGGFRGGRGGGGD 699
>Q28HE9:CELF1_XENTR CUG-BP- and ETR-3-like factor 1 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 490 Score = 56.6 bits (135), Expect = 3e-07 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 5/174 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIVFADPAV 401 + D+ K+F+G + +E LRE FE+YG V E ++RDR+ +++G FI F Sbjct: 12 DPDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKA 71 Query: 402 ---AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + ++ G M + P D ++ +K+FVG ++ Sbjct: 72 ALEAQNALHNMKVLPG-MHHPIQMKPADSEK------------NNAVEDRKLFVGMVSKK 118 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 E D R F QFG I + ++ + RG F+T+ + A+ K H+ Sbjct: 119 CNENDIRAMFSQFGQIEESRILRGPDGM-SRGCAFVTFTTRSMAQMAI-KAMHQ 170 Score = 35.0 bits (79), Expect = 1.1 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 407 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 463 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 464 -QSMNGFQIGMKR 475
>P92964:RSP31_ARATH Arginine/serine-rich-splicing factor RSP31 - Arabidopsis thaliana| (Mouse-ear cress) Length = 264 Score = 56.2 bits (134), Expect = 5e-07 Identities = 74/299 (24%), Positives = 116/299 (38%), Gaps = 13/299 (4%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--- 416 +F+G ++T + L F+KYG V DR ++ G+ F+ F D AE I Sbjct: 4 VFVGNFEYETRQSDLERLFDKYGRV-------DRVDMKS-GYAFVYFEDERDAEDAIRKL 55 Query: 417 ------MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVT 578 EK + + ++ PR D +A TK +FV T Sbjct: 56 DNFPFGYEKRRLSVEWAKGERGRPRGDAKA----------PSNLKPTKTLFVINFDPIRT 105 Query: 579 -EADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH-ELNGKMV 752 E D +FE +G +T+V + R F F+ +++++ KAL T ++ ++V Sbjct: 106 KEHDIEKHFEPYGKVTNVRIR--------RNFSFVQFETQEDATKALEATQRSKILDRVV 157 Query: 753 EVKRAV--PKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDARFG 926 V+ A+ E RSP ++ V R S Y P G G R + Sbjct: 158 SVEYALKDDDERDDRNGGRSPRRSLSPVYRRRPS------PDYGRRPSPGQGRRPSPDY- 210 Query: 927 LLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNS 1103 GR+ P + G ++ +P G S YGRQ +P Y RY S Sbjct: 211 ----GRARSPEYDRYKGPAA-YERRRSPDYG-----RRSSDYGRQRSPGYD----RYRS 255
>Q9WX37:RBPE_ANASP Putative RNA-binding protein rbpE - Anabaena sp. (strain PCC 7120)| Length = 99 Score = 56.2 bits (134), Expect = 5e-07 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +++G +S+ +D L + F +YG V + DR TGR RGFGF+ A + I Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62 Query: 426 HMID--GRMVEAKKAVPRDDQQA 488 + GR+++ KA PR+++ A Sbjct: 63 DGAEWMGRVLKVNKARPREEKGA 85 Score = 53.1 bits (126), Expect = 4e-06 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-FK 722 I+VG L+ +VT+ D F ++G++T V + D T R RGFGF+ +S A D A+ Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62 Query: 723 TFHELNGKMVEVKRAVPKE 779 E G++++V +A P+E Sbjct: 63 DGAEWMGRVLKVNKARPRE 81
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 55.8 bits (133), Expect = 6e-07 Identities = 37/157 (23%), Positives = 66/157 (42%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + D + L F G + IMRD TG + G+ F+ F ++R I Sbjct: 129 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 188 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + I R K + R +++ + ++V L T+T+ T F Sbjct: 189 NGITVRNKRLKVSYARPGGESI--------------KDTNLYVTNLPRTITDDQLDTIFG 234 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 ++G+I ++ D T RPRG F+ Y+ + +A+ Sbjct: 235 KYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 271
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 55.8 bits (133), Expect = 6e-07 Identities = 37/157 (23%), Positives = 66/157 (42%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + D + L F G + IMRD TG + G+ F+ F ++R I Sbjct: 127 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 186 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + I R K + R +++ + ++V L T+T+ T F Sbjct: 187 NGITVRNKRLKVSYARPGGESI--------------KDTNLYVTNLPRTITDDQLDTIFG 232 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 ++G+I ++ D T RPRG F+ Y+ + +A+ Sbjct: 233 KYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 269
>Q4QQT3:CELF1_RAT CUG-BP- and ETR-3-like factor 1 - Rattus norvegicus (Rat)| Length = 487 Score = 55.8 bits (133), Expect = 6e-07 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 5/174 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIVFADPAV 401 + DA K+F+G + +E LRE FE+YG V E I+RDR+ +++G F+ F Sbjct: 12 DLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKA 71 Query: 402 ---AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + ++ G M + P D ++ +K+F+G ++ Sbjct: 72 ALEAQNALHNMKVLPG-MHHPIQMKPADSEK------------NNAVEDRKLFIGMISKK 118 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 TE D R F FG I + ++ + RG F+T+ + A+ K H+ Sbjct: 119 CTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVTFTTRTMAQTAI-KAMHQ 170 Score = 35.0 bits (79), Expect = 1.1 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 404 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 460 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 461 -QSMNGFQIGMKR 472
>P28659:CELF1_MOUSE CUG-BP- and ETR-3-like factor 1 - Mus musculus (Mouse)| Length = 486 Score = 55.8 bits (133), Expect = 6e-07 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 5/174 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIVFADPAV 401 + DA K+F+G + +E LRE FE+YG V E I+RDR+ +++G F+ F Sbjct: 12 DLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKA 71 Query: 402 ---AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + ++ G M + P D ++ +K+F+G ++ Sbjct: 72 ALEAQNALHNMKVLPG-MHHPIQMKPADSEK------------NNAVEDRKLFIGMISKK 118 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 TE D R F FG I + ++ + RG F+T+ + A+ K H+ Sbjct: 119 CTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVTFTTRTMAQTAI-KAMHQ 170 Score = 35.0 bits (79), Expect = 1.1 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 403 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 459 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 460 -QSMNGFQIGMKR 471
>Q44556:RBPD_ANASP Putative RNA-binding protein rbpD - Anabaena sp. (strain PCC 7120)| Length = 94 Score = 55.5 bits (132), Expect = 8e-07 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 +++G +S+ E L+ F YGEV V+ DR TGR RGF F+ + A + I E Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITEL 62 Query: 426 HMID--GRMVEAKKAVPRDDQQ 485 + GR + KA PR+D + Sbjct: 63 DGAEWMGRQLRVNKAKPREDDR 84 Score = 49.3 bits (116), Expect = 6e-05 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK- 722 I+VG L+ TEAD + F +G + VV+ D T R RGF F+ + + D A+ + Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITEL 62 Query: 723 TFHELNGKMVEVKRAVPKE 779 E G+ + V +A P+E Sbjct: 63 DGAEWMGRQLRVNKAKPRE 81
>Q92879:CELF1_HUMAN CUG-BP- and ETR-3-like factor 1 - Homo sapiens (Human)| Length = 486 Score = 55.5 bits (132), Expect = 8e-07 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 5/174 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIVFADPAV 401 + DA K+F+G + +E LRE FE+YG V E ++RDR+ +++G F+ F Sbjct: 12 DLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKA 71 Query: 402 ---AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + ++ G M + P D ++ +K+F+G ++ Sbjct: 72 ALEAQNALHNMKVLPG-MHHPIQMKPADSEK------------NNAVEDRKLFIGMISKK 118 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 TE D R F FG I + ++ + RG F+T+ + A+ + K H+ Sbjct: 119 CTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVTFTTR-AMAQTAIKAMHQ 170 Score = 35.0 bits (79), Expect = 1.1 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 403 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 459 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 460 -QSMNGFQIGMKR 471
>Q4R979:RBM4_MACFA RNA-binding protein 4 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 364 Score = 55.1 bits (131), Expect = 1e-06 Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 1/192 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIG + + E +R FE+YG+V+E I+++ +GF+ D AE I Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 423 KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYF 602 H V ++ + + K+ VG ++ T T + R F Sbjct: 55 LHHYKLHGVNINVEASKNKSKT----------------STKLHVGNISPTCTNKELRAKF 98 Query: 603 EQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 E++G + + ++ D + F+ + +EDAV+ E GK + V+ + + Sbjct: 99 EEYGPVIECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR- 149 Query: 780 LSPGPSMRSPAG 815 L P M +G Sbjct: 150 LRTAPGMGDQSG 161
>Q9BWF3:RBM4_HUMAN RNA-binding protein 4 - Homo sapiens (Human)| Length = 364 Score = 55.1 bits (131), Expect = 1e-06 Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 1/192 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIG + + E +R FE+YG+V+E I+++ +GF+ D AE I Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 423 KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYF 602 H V ++ + + K+ VG ++ T T + R F Sbjct: 55 LHHYKLHGVNINVEASKNKSKT----------------STKLHVGNISPTCTNKELRAKF 98 Query: 603 EQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 E++G + + ++ D + F+ + +EDAV+ E GK + V+ + + Sbjct: 99 EEYGPVIECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR- 149 Query: 780 LSPGPSMRSPAG 815 L P M +G Sbjct: 150 LRTAPGMGDQSG 161
>Q3MHX3:RBM4_BOVIN RNA-binding protein 4 - Bos taurus (Bovine)| Length = 362 Score = 55.1 bits (131), Expect = 1e-06 Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 1/192 (0%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 KLFIG + + E +R FE+YG+V+E I+++ +GF+ D AE I Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 423 KHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYF 602 H V ++ + + K+ VG ++ T T + R F Sbjct: 55 LHHYKLHGVNINVEASKNKSKT----------------STKLHVGNISPTCTNKELRAKF 98 Query: 603 EQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKALFKTFHELNGKMVEVKRAVPKE 779 E++G + + ++ D + F+ + +EDAV+ E GK + V+ + + Sbjct: 99 EEYGPVIECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR- 149 Query: 780 LSPGPSMRSPAG 815 L P M +G Sbjct: 150 LRTAPGMGDQSG 161
>O57406:CEL1A_XENLA CUG-BP- and ETR-3-like factor 1-A - Xenopus laevis (African clawed| frog) Length = 489 Score = 55.1 bits (131), Expect = 1e-06 Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 5/174 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIVFADPAV 401 + D+ K+F+G + +E LRE FE+YG V E ++RDR+ +++G FI F Sbjct: 12 DPDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKA 71 Query: 402 ---AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + ++ G M + P D ++ +K+F+G ++ Sbjct: 72 ALEAQNALHNMKVLPG-MHHPIQMKPADSEK------------NNAVEDRKLFIGMVSKN 118 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 E D R F FG I + ++ + RG F+T+ + A+ K+ H+ Sbjct: 119 CNENDIRAMFSPFGQIEECRILRGPDGM-SRGCAFVTFTTRSMAQMAI-KSMHQ 170 Score = 34.3 bits (77), Expect = 1.9 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 406 LFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 462 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 463 -QSMNGFQIGMKR 474
>Q6PDU1:SFRS2_RAT Splicing factor, arginine/serine-rich 2 - Rattus norvegicus (Rat)| Length = 221 Score = 54.7 bits (130), Expect = 1e-06 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 P P++E L + +++ T+ D LR FEKYG V + I RDR T +RGF F+ F D Sbjct: 6 PPPDVEGMTS-LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 393 PAVAERVI--MEKHMIDGRMVEAKKA 464 AE + M+ ++DGR + + A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 37.0 bits (84), Expect = 0.29 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVD 707 V L + R FE++G + DV + D T+ RGF F+ + D+EDA+D Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
>Q06A98:SFRS2_PIG Splicing factor, arginine/serine-rich 2 - Sus scrofa (Pig)| Length = 221 Score = 54.7 bits (130), Expect = 1e-06 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 P P++E L + +++ T+ D LR FEKYG V + I RDR T +RGF F+ F D Sbjct: 6 PPPDVEGMTS-LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 393 PAVAERVI--MEKHMIDGRMVEAKKA 464 AE + M+ ++DGR + + A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 37.0 bits (84), Expect = 0.29 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVD 707 V L + R FE++G + DV + D T+ RGF F+ + D+EDA+D Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
>Q5R1W5:SFRS2_PANTR Splicing factor, arginine/serine-rich 2 - Pan troglodytes| (Chimpanzee) Length = 221 Score = 54.7 bits (130), Expect = 1e-06 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 P P++E L + +++ T+ D LR FEKYG V + I RDR T +RGF F+ F D Sbjct: 6 PPPDVEGMTS-LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 393 PAVAERVI--MEKHMIDGRMVEAKKA 464 AE + M+ ++DGR + + A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 37.0 bits (84), Expect = 0.29 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVD 707 V L + R FE++G + DV + D T+ RGF F+ + D+EDA+D Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
>Q62093:SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 - Mus musculus (Mouse)| Length = 221 Score = 54.7 bits (130), Expect = 1e-06 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 P P++E L + +++ T+ D LR FEKYG V + I RDR T +RGF F+ F D Sbjct: 6 PPPDVEGMTS-LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 393 PAVAERVI--MEKHMIDGRMVEAKKA 464 AE + M+ ++DGR + + A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 37.0 bits (84), Expect = 0.29 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVD 707 V L + R FE++G + DV + D T+ RGF F+ + D+EDA+D Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
>Q01130:SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 - Homo sapiens (Human)| Length = 221 Score = 54.7 bits (130), Expect = 1e-06 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 P P++E L + +++ T+ D LR FEKYG V + I RDR T +RGF F+ F D Sbjct: 6 PPPDVEGMTS-LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 393 PAVAERVI--MEKHMIDGRMVEAKKA 464 AE + M+ ++DGR + + A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 37.0 bits (84), Expect = 0.29 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVD 707 V L + R FE++G + DV + D T+ RGF F+ + D+EDA+D Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
>P30352:SFRS2_CHICK Splicing factor, arginine/serine-rich 2 - Gallus gallus (Chicken)| Length = 221 Score = 54.7 bits (130), Expect = 1e-06 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 P P++E L + +++ T+ D LR FEKYG V + I RDR T +RGF F+ F D Sbjct: 6 PPPDVEGMTS-LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 393 PAVAERVI--MEKHMIDGRMVEAKKA 464 AE + M+ ++DGR + + A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 37.0 bits (84), Expect = 0.29 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVD 707 V L + R FE++G + DV + D T+ RGF F+ + D+EDA+D Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
>Q3MHR5:SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 - Bos taurus (Bovine)| Length = 221 Score = 54.7 bits (130), Expect = 1e-06 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 P P++E L + +++ T+ D LR FEKYG V + I RDR T +RGF F+ F D Sbjct: 6 PPPDVEGMTS-LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 393 PAVAERVI--MEKHMIDGRMVEAKKA 464 AE + M+ ++DGR + + A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 37.0 bits (84), Expect = 0.29 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVD 707 V L + R FE++G + DV + D T+ RGF F+ + D+EDA+D Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
>Q8CGC6:RBM28_MOUSE RNA-binding protein 28 - Mus musculus (Mouse)| Length = 750 Score = 54.7 bits (130), Expect = 1e-06 Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 11/189 (5%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 LF+G + D+L E F + G V + ++ ++ + RGFG++ F+ +R + E Sbjct: 6 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 426 HMIDGRMVE---AKKAVPRDDQQALXXXXXXXXXXXXXXRTKKI-------FVGGLASTV 575 +G ++ AKK + ++ + K+ + L+ Sbjct: 66 TTFEGCKIDVTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLIIRNLSFKC 125 Query: 576 TEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL-FKTFHELNGKMV 752 +E D + F +GT+ +V + + + RGF F+ + + KAL E+ G+ V Sbjct: 126 SEDDLKAVFTHYGTVLEVNIPKKPD-GKMRGFAFVQFKNLLEAGKALKGANMKEIKGRTV 184 Query: 753 EVKRAVPKE 779 V AV K+ Sbjct: 185 AVDWAVAKD 193 Score = 41.2 bits (95), Expect = 0.015 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 +L I +S+ +ED L+ F YG V+E I + + G+ RGF F+ F + A + + Sbjct: 115 RLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPK-KPDGKMRGFAFVQFKNLLEAGKALKG 173 Query: 423 KHM--IDGRMVEAKKAVPRD 476 +M I GR V AV +D Sbjct: 174 ANMKEIKGRTVAVDWAVAKD 193 Score = 32.0 bits (71), Expect = 9.2 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 7/87 (8%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 K +F+ L+ E +QFG + V V+ +T+ +G F + +++A K L Sbjct: 325 KTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLA 384 Query: 720 KTFHE-------LNGKMVEVKRAVPKE 779 E L+G+ ++V AV ++ Sbjct: 385 AASPEAEGGGLKLDGRQLKVDLAVTRD 411
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 54.7 bits (130), Expect = 1e-06 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 6/180 (3%) Frame = +3 Query: 210 EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG---RARGFGFI 380 E E E LFI +++DT E++L+E F K G V I + + + GFGF+ Sbjct: 720 EEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFV 779 Query: 381 VFADPAVAERVI--MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFV 554 + P A++ + ++ H++DG +E + + R + A+ T KI V Sbjct: 780 EYRKPEQAQKALKQLQGHVVDGHKLEVRIS-ERATKPAV--TLARKKQVPRKQTTSKILV 836 Query: 555 GGLASTVTEADFRTYFEQFGTITDV-VVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFH 731 + + R F FG + V + T RGFGF+ + ++ +A H Sbjct: 837 RNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCH 896 Score = 46.2 bits (108), Expect = 5e-04 Identities = 25/81 (30%), Positives = 43/81 (53%) Frame = +3 Query: 216 EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP 395 E E A++G+LF+ + + + E+ L + F KYG + E D T + +GF FI F P Sbjct: 394 EEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 453 Query: 396 AVAERVIMEKHMIDGRMVEAK 458 A + E +DG++ + + Sbjct: 454 EHAVKAYSE---VDGQVFQGR 471 Score = 42.4 bits (98), Expect = 0.007 Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 12/192 (6%) Frame = +3 Query: 258 GISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFA-DPAVAERVIMEKHMI 434 G ++ E + E+ V ++ A G G+ F+ F+ + V + + + + Sbjct: 300 GAPFNVTEKNVMEFLAPLKPVAIRIVRN--AHGNKTGYIFVDFSNEEEVKQALKCNREYM 357 Query: 435 DGRMVEA--------KKAVPRDDQQALXXXXXXXXXXXXXX-RTKKIFVGGLASTVTEAD 587 GR +E K P++ ++ + ++FV L T TE D Sbjct: 358 GGRYIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEED 417 Query: 588 FRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHEL-NGKMVEV-K 761 F ++G ++++ D T++P+GF FIT+ + KA + ++ G+M+ V Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477 Query: 762 RAVPKELSPGPS 797 + KE S S Sbjct: 478 STIKKEASEDAS 489 Score = 35.4 bits (80), Expect = 0.83 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 713 ++ V L + + E FR F FGT+TD + + + + R FGFI + SE+ KA Sbjct: 3 RLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD-GKFRKFGFIGFKSEEEAQKA 58
>Q5R995:CELF1_PONPY CUG-BP- and ETR-3-like factor 1 - Pongo pygmaeus (Orangutan)| Length = 513 Score = 54.7 bits (130), Expect = 1e-06 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 5/174 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIVFADPAV 401 + DA K+F+G + +E LRE FE+YG V E ++RDR+ +++G F+ F Sbjct: 39 DLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKA 98 Query: 402 ---AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + ++ G M + P D ++ +K+F+G ++ Sbjct: 99 ALEAQNALHNMKVLPG-MHHPIQMKPADSEK------------NNAVEDRKLFIGMISKK 145 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 TE D R F FG I + +++ + RG +T+ + A+ + K H+ Sbjct: 146 CTENDIRVMFSSFGQIEECRILWGPD-GLSRGCALVTFTTR-AMAQTAIKAMHQ 197 Score = 35.0 bits (79), Expect = 1.1 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 430 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 486 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 487 -QSMNGFQIGMKR 498
>Q9IBD0:CELF1_DANRE CUG-BP- and ETR-3-like factor 1 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 501 Score = 54.7 bits (130), Expect = 1e-06 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 5/174 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIVF---AD 392 + D+ K+F+G I +ED+LRE FE YG V E ++RDR+ +++G F+ + Sbjct: 12 DIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKS 71 Query: 393 PAVAERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + ++ G M + P D ++ +K+FVG ++ Sbjct: 72 ALEAQNALHNMKILPG-MHHPIQMKPADSEK------------NNAVEDRKLFVGMISKK 118 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 E D R F +G I + ++ + RG F+T+ + A+ K+ H+ Sbjct: 119 CNENDIRLMFSPYGQIEECRILRGPD-GLSRGCAFVTFTARQMAQSAI-KSMHQ 170 Score = 33.9 bits (76), Expect = 2.4 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 418 LFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSSQAAI--- 474 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 475 -QSMNGFQIGMKR 486
>Q9V3G3:PPIE_DROME Peptidyl-prolyl cis-trans isomerase E - Drosophila melanogaster| (Fruit fly) Length = 300 Score = 54.3 bits (129), Expect = 2e-06 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDKAL 716 + I+VGGLA VTE F FG I D+ + D+ +QR RGF FI Y+ SEDA Sbjct: 6 RTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAID 65 Query: 717 FKTFHELNGKMVEVKRAVP 773 EL G+ + V A P Sbjct: 66 NMNDSELCGRTIRVNLAKP 84 Score = 36.2 bits (82), Expect = 0.49 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +3 Query: 225 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPA 398 M D +++GG++ + E L F +G++ + + D + R RGF FI + ++ A Sbjct: 1 MSNDKRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDA 60 Query: 399 VAERVIMEKHMIDGRMVEAKKAVP 470 A M + GR + A P Sbjct: 61 AAAIDNMNDSELCGRTIRVNLAKP 84
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 54.3 bits (129), Expect = 2e-06 Identities = 58/240 (24%), Positives = 92/240 (38%), Gaps = 14/240 (5%) Frame = +3 Query: 243 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 416 KLFIG + T LR FEKYG VVE ++++ +GF+ I Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQN 59 Query: 417 MEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRT 596 + + ++ ++ + A R T KIFVG L + R Sbjct: 60 LNGYTLNEFAIKVEAAKSRRAPNT---------------PTTKIFVGNLTDKTRAPEVRE 104 Query: 597 YFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVK----R 764 F+++GT+ + ++ R +GF+ D V A+ ELNG++V+ + + Sbjct: 105 LFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAI----KELNGRVVDGQPLKVQ 152 Query: 765 AVPKELSPGPSMRSP--------AGGINYVMNRANSFLNGYTQGYSPSPVGGYGMRMDAR 920 + P P M P +G + R G + SP GGY RM R Sbjct: 153 VSTSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREPPSPLSAGGYRDRMYGR 212
>O13759:CSX1_SCHPO RNA-binding post-transcriptional regulator csx1 -| Schizosaccharomyces pombe (Fission yeast) Length = 632 Score = 54.3 bits (129), Expect = 2e-06 Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 15/172 (8%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEK-YGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIM- 419 +F+G + T + L F Y A I+ D TG +R +GF+ F+ + +M Sbjct: 184 IFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMH 243 Query: 420 -EKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKK------------IFVGG 560 + ++ GR + A P+ R +FVGG Sbjct: 244 MQGYLCQGRPLRISVASPKSRASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGG 303 Query: 561 LASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 LAS ++E D + F+ FG I ++ + + +G GF+ Y + A +KA+ Sbjct: 304 LASNLSEKDLQVCFQPFGRILNIKIPFG------KGCGFVQYSEKSAAEKAI 349
>Q6CQR6:MRD1_KLULA Multiple RNA-binding domain-containing protein 1 - Kluyveromyces| lactis (Yeast) (Candida sphaerica) Length = 878 Score = 53.9 bits (128), Expect = 2e-06 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 7/89 (7%) Frame = +3 Query: 234 DAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPAVAE 407 + G+LF+ I + ED R+ F YGE+ E I D TG+++GF +++F AD A Sbjct: 328 ETGRLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATA 387 Query: 408 RVIMEKHMIDGRMV-----EAKKAVPRDD 479 V ++K + GR++ +AKK+ D+ Sbjct: 388 FVELDKQIFQGRLLHILPADAKKSHKLDE 416 Score = 40.4 bits (93), Expect = 0.026 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = +3 Query: 537 TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 T ++F+ + T TE DFR F +G + +V + D T + +GF ++ + + D A Sbjct: 329 TGRLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAF 388 Query: 717 FKTFHEL-NGKMVEVKRAVPKE 779 + ++ G+++ + A K+ Sbjct: 389 VELDKQIFQGRLLHILPADAKK 410
>O57437:DAZLA_XENLA Deleted in azoospermia-like-A - Xenopus laevis (African clawed| frog) Length = 286 Score = 53.9 bits (128), Expect = 2e-06 Identities = 26/83 (31%), Positives = 48/83 (57%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 PE E +F+GGI +E +R++F ++G V E I+ DR TG ++G+GFI F+D Sbjct: 26 PEGEIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSDEV 84 Query: 399 VAERVIMEKHMIDGRMVEAKKAV 467 ++++ + G+ ++ A+ Sbjct: 85 DVQKIVKSQISFHGKKLKLGPAI 107 Score = 50.1 bits (118), Expect = 3e-05 Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 5/123 (4%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +FVGG+ T+ E + R +F +FG + +V ++ D T +G+GFI++ E V K + K+ Sbjct: 35 VFVGGIDITMDEIEIRDFFTRFGNVKEVKIITD-RTGVSKGYGFISFSDEVDVQK-IVKS 92 Query: 726 FHELNGKMVEVKRAVPK---ELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSP--SPV 890 +GK +++ A+ K + P P + S ++ N N+ + Y Q +SP SP+ Sbjct: 93 QISFHGKKLKLGPAIRKICTYVQPRPVVLSHPTPFHHAWNNQNA--DSYIQ-HSPIVSPI 149 Query: 891 GGY 899 Y Sbjct: 150 TQY 152
>Q44554:RBPB_ANASP Putative RNA-binding protein rbpB - Anabaena sp. (strain PCC 7120)| Length = 103 Score = 53.5 bits (127), Expect = 3e-06 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--M 419 +++G +S+D E+ L F +YG V + DR TGR RGFGF+ A I + Sbjct: 3 IYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEAL 62 Query: 420 EKHMIDGRMVEAKKAVPRDDQ 482 + GR ++ KA PR+D+ Sbjct: 63 DGAEWMGRDLKVNKAKPREDR 83 Score = 48.9 bits (115), Expect = 7e-05 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 3/109 (2%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 I+VG L+ VTE F ++G++ V + D T R RGFGF+ S DA + A + Sbjct: 3 IYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGS-DAEETAAIEA 61 Query: 726 FH--ELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRA-NSFLNGY 863 E G+ ++V +A P+E G R GG NR+ N+F N Y Sbjct: 62 LDGAEWMGRDLKVNKAKPREDRGG--SRGSFGG-----NRSNNNFRNRY 103
>Q3ZC34:RBMS2_BOVIN RNA-binding motif, single-stranded-interacting protein 2 - Bos| taurus (Bovine) Length = 407 Score = 53.5 bits (127), Expect = 3e-06 Identities = 48/225 (21%), Positives = 89/225 (39%), Gaps = 12/225 (5%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L+I G+ T + L + + YG++V + D+ T + +G+GF+ F P+ A++ + Sbjct: 58 LYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT-- 115 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + V+A+ A ++ +++ L ++ E + + Sbjct: 116 -ALKASGVQAQMAKQQEQDPT------------------NLYISNLPLSMDEQELEGMLK 156 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKELS 785 FG + ++ D + RG GF +S + + + NGK ++ VP Sbjct: 157 PFGQVISTRILRD-TSGTSRGVGFARMESTEKCEAII----THFNGKYIKTPPGVPAPSD 211 Query: 786 P--------GPSMRSPAGGINYVMN-RA---NSFLNGYTQGYSPS 884 P GP R G +V N RA N + G Y PS Sbjct: 212 PLLCKFADGGPKKRQNQG--KFVQNGRAWPRNGDMGGMALTYDPS 254 Score = 36.2 bits (82), Expect = 0.49 Identities = 21/83 (25%), Positives = 37/83 (44%) Frame = +3 Query: 222 EMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAV 401 + E D L+I + +E L + +G+V+ I+RD +G +RG GF Sbjct: 129 QQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRD-TSGTSRGVGFARMESTEK 187 Query: 402 AERVIMEKHMIDGRMVEAKKAVP 470 E +I +G+ ++ VP Sbjct: 188 CEAIITH---FNGKYIKTPPGVP 207
>Q91W59:RBMS1_MOUSE RNA-binding motif, single-stranded-interacting protein 1 - Mus| musculus (Mouse) Length = 403 Score = 53.5 bits (127), Expect = 3e-06 Identities = 43/224 (19%), Positives = 88/224 (39%), Gaps = 14/224 (6%) Frame = +3 Query: 159 PRQPARDPFPGST------------GWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYF 302 P P P P +T GW + L+I G+ +T + L + Sbjct: 30 PAHPMAPPSPSTTSSNNNSSSSSNSGWD-------QLSKTNLYIRGLPPNTTDQDLVKLC 82 Query: 303 EKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI--MEKHMIDGRMVEAKKAVPRD 476 + YG++V + D+AT + +G+GF+ F PA A++ + ++ + + +M + ++ P + Sbjct: 83 QPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKANGVQAQMAKQQEQDPTN 142 Query: 477 DQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQ 656 +++ L ++ E + + FG + V+ D ++ Sbjct: 143 -----------------------LYISNLPLSMDEQELENMLKPFGQVISTRVLRD-SSG 178 Query: 657 RPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKELSP 788 RG GF +S + + + NGK ++ V P Sbjct: 179 ASRGVGFARMESTEKCEAVI----GHFNGKFIKTPPGVSAPTEP 218
>Q75A83:MRD1_ASHGO Multiple RNA-binding domain-containing protein 1 - Ashbya gossypii| (Yeast) (Eremothecium gossypii) Length = 838 Score = 53.5 bits (127), Expect = 3e-06 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 7/87 (8%) Frame = +3 Query: 240 GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIM 419 G+LF+ I +D E+ ++ F YGE+ E + D TG+++GF +++F DP A + Sbjct: 301 GRLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYI 360 Query: 420 E--KHMIDGRMV-----EAKKAVPRDD 479 E K + GR++ +AKK D+ Sbjct: 361 ELDKQIFQGRLLHILPADAKKTHRLDE 387 Score = 37.0 bits (84), Expect = 0.29 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Frame = +3 Query: 537 TKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY-DSEDAVDKA 713 T ++F+ + TE DF+ F +G + +V V D T + +GF ++ + D E A + Sbjct: 300 TGRLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAY 359 Query: 714 LFKTFHELNGKMVEVKRAVPKE 779 + G+++ + A K+ Sbjct: 360 IELDKQIFQGRLLHILPADAKK 381
>Q00916:RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa homolog - Saccharomyces| cerevisiae (Baker's yeast) Length = 300 Score = 53.1 bits (126), Expect = 4e-06 Identities = 22/59 (37%), Positives = 40/59 (67%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 422 +FIG + +D +E L++YF K+GE+ + I++D+ T +++G+ FIVF DP ++ E Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKE 167 Score = 38.5 bits (88), Expect = 0.099 Identities = 16/49 (32%), Positives = 29/49 (59%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY 686 + IF+G L + E + + YF +FG I + ++ D TQ+ +G+ FI + Sbjct: 107 RTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVF 155
>Q6PHZ5:RB15B_MOUSE Putative RNA-binding protein 15B - Mus musculus (Mouse)| Length = 564 Score = 53.1 bits (126), Expect = 4e-06 Identities = 46/170 (27%), Positives = 73/170 (42%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 PE + A LFIG + +E LR FEKYG ++E V+++ A G+ + F+ F + Sbjct: 2 PEDDQRATRN-LFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQN 59 Query: 393 PAVAERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 +A R K + GR++ T +++VGGL Sbjct: 60 LDMAHRA---KVAMSGRVIGRNPI---------------KIGYGKANPTTRLWVGGLGPN 101 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 + A F++FG+I + DH + F +I Y+S DA A K Sbjct: 102 TSLAALAREFDRFGSIRTI----DH--VKGDSFAYIQYESLDAAQAACAK 145 Score = 35.8 bits (81), Expect = 0.64 Identities = 22/83 (26%), Positives = 39/83 (46%) Frame = +3 Query: 465 VPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYD 644 +P DDQ+A T+ +F+G L +V+E + R FE++G I +VV+ Sbjct: 1 MPEDDQRA----------------TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRP 44 Query: 645 HNTQRPRGFGFITYDSEDAVDKA 713 Q + F+ + + D +A Sbjct: 45 ARGQ-GGAYAFLKFQNLDMAHRA 66
>Q8NDT2:RB15B_HUMAN Putative RNA-binding protein 15B - Homo sapiens (Human)| Length = 563 Score = 53.1 bits (126), Expect = 4e-06 Identities = 46/170 (27%), Positives = 73/170 (42%) Frame = +3 Query: 213 PEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD 392 PE + A LFIG + +E LR FEKYG ++E V+++ A G+ + F+ F + Sbjct: 2 PEDDQRATRN-LFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQN 59 Query: 393 PAVAERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 +A R K + GR++ T +++VGGL Sbjct: 60 LDMAHRA---KVAMSGRVIGRNPI---------------KIGYGKANPTTRLWVGGLGPN 101 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 + A F++FG+I + DH + F +I Y+S DA A K Sbjct: 102 TSLAALAREFDRFGSIRTI----DH--VKGDSFAYIQYESLDAAQAACAK 145 Score = 35.8 bits (81), Expect = 0.64 Identities = 22/83 (26%), Positives = 39/83 (46%) Frame = +3 Query: 465 VPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYD 644 +P DDQ+A T+ +F+G L +V+E + R FE++G I +VV+ Sbjct: 1 MPEDDQRA----------------TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRP 44 Query: 645 HNTQRPRGFGFITYDSEDAVDKA 713 Q + F+ + + D +A Sbjct: 45 ARGQ-GGAYAFLKFQNLDMAHRA 66
>Q9QZH3:PPIE_MOUSE Peptidyl-prolyl cis-trans isomerase E - Mus musculus (Mouse)| Length = 301 Score = 53.1 bits (126), Expect = 4e-06 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Frame = +3 Query: 537 TKKI-FVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDK 710 TK++ +VGGLA V + F FG ITD+ + D+ T++ RGF F+ ++ +EDA Sbjct: 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAA 63 Query: 711 ALFKTFHELNGKMVEVKRAVPKELSPGPS 797 EL G+ + V A P + G S Sbjct: 64 IDNMNESELFGRTIRVNLAKPMRIKEGSS 92 Score = 38.1 bits (87), Expect = 0.13 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPAVAERVIM 419 L++GG++ + ++ L F +G++ + I D T + RGF F+ F A+ A A M Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 420 EKHMIDGRMVEAKKAVP 470 + + GR + A P Sbjct: 68 NESELFGRTIRVNLAKP 84
>Q9UNP9:PPIE_HUMAN Peptidyl-prolyl cis-trans isomerase E - Homo sapiens (Human)| Length = 301 Score = 53.1 bits (126), Expect = 4e-06 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Frame = +3 Query: 537 TKKI-FVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYD-SEDAVDK 710 TK++ +VGGLA V + F FG ITD+ + D+ T++ RGF F+ ++ +EDA Sbjct: 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAA 63 Query: 711 ALFKTFHELNGKMVEVKRAVPKELSPGPS 797 EL G+ + V A P + G S Sbjct: 64 IDNMNESELFGRTIRVNLAKPMRIKEGSS 92 Score = 38.1 bits (87), Expect = 0.13 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVF--ADPAVAERVIM 419 L++GG++ + ++ L F +G++ + I D T + RGF F+ F A+ A A M Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 420 EKHMIDGRMVEAKKAVP 470 + + GR + A P Sbjct: 68 NESELFGRTIRVNLAKP 84
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 53.1 bits (126), Expect = 4e-06 Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%) Frame = +3 Query: 240 GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADP--AVAERV 413 G+LF+ I + + ED ++ F YGE+ E + D TG ++GF +++FA P AV + Sbjct: 325 GRLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYI 384 Query: 414 IMEKHMIDGRMVEAKKAVPRDDQQ 485 ++K + GR++ A D + Sbjct: 385 ELDKQIFQGRLLHILAADEMKDHR 408 Score = 36.2 bits (82), Expect = 0.49 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY-DSEDAV-- 704 +T ++F+ + + TE DF+ F +G + +V V D T +GF ++ + E+AV Sbjct: 323 KTGRLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQA 382 Query: 705 ----DKALFK 722 DK +F+ Sbjct: 383 YIELDKQIFQ 392
>Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens (Human)| Length = 282 Score = 52.8 bits (125), Expect = 5e-06 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 19/127 (14%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVDKALF 719 V GL+ TE D R F ++G ++ V V+YD T R RGF F+ + DS++A+++A Sbjct: 123 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERA-- 180 Query: 720 KTFHELNGKMVEVKRAVPKEL---SPGPSMRSP------------AGGINYVMNRANSFL 854 EL+G+ + V ++ K +PG M P GG R + + Sbjct: 181 -NGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYD 239 Query: 855 NGYTQGY 875 GY +GY Sbjct: 240 RGYDRGY 246 Score = 43.5 bits (101), Expect = 0.003 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Frame = +3 Query: 150 PQDPRQPARDPFPGS-----TGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYG 314 P+ R+ +R P S TG + P+P L + G+S T E LRE F +YG Sbjct: 89 PEYRRRRSRSHSPMSNRRRHTGSRANPDPNT-----CLGVFGLSLYTTERDLREVFSRYG 143 Query: 315 EVVEAVIMRDRATGRARGFGFIVF 386 + ++ D+ TGR+RGF F+ F Sbjct: 144 PLSGVNVVYDQRTGRSRGFAFVYF 167
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 52.8 bits (125), Expect = 5e-06 Identities = 35/157 (22%), Positives = 65/157 (41%) Frame = +3 Query: 246 LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 L + + D + L F G + IM+D TG + G+ F+ FA A+ I Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTV 163 Query: 426 HMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFE 605 + I R K + R +++ + ++V L T+T+ + F Sbjct: 164 NGITVRNKRLKVSYARPGGESI--------------KDTNLYVTNLPRTITDDELEKIFG 209 Query: 606 QFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 716 ++G I ++ D T RPRG F+ ++ + +A+ Sbjct: 210 KYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAI 246
>Q5PQP1:RBMS1_RAT RNA-binding motif, single-stranded-interacting protein 1 - Rattus| norvegicus (Rat) Length = 403 Score = 52.8 bits (125), Expect = 5e-06 Identities = 44/222 (19%), Positives = 85/222 (38%), Gaps = 12/222 (5%) Frame = +3 Query: 159 PRQPARDPFPGST------------GWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYF 302 P P P P +T GW + L+I G+ +T + L + Sbjct: 30 PAHPMAPPSPSTTSSNNNSSSSSNSGWD-------QLSKTNLYIRGLPPNTTDQDLVKLC 82 Query: 303 EKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQ 482 + YG++V + D+AT + +G+GF+ F PA A++ + + V+A+ A ++ Sbjct: 83 QPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAV---SALKASGVQAQMAKQQEQD 139 Query: 483 QALXXXXXXXXXXXXXXRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRP 662 +++ L ++ E + + FG + V+ D ++ Sbjct: 140 PT------------------NLYISNLPLSMDEQELENMLKPFGQVISTRVLRD-SSGTS 180 Query: 663 RGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKELSP 788 RG GF +S + + + NGK ++ V P Sbjct: 181 RGVGFARMESTEKCEAVI----GHFNGKFIKTPPGVSAPTEP 218
>Q792H5:CELF2_RAT CUG-BP- and ETR-3-like factor 2 - Rattus norvegicus (Rat)| Length = 508 Score = 52.8 bits (125), Expect = 5e-06 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 4/179 (2%) Frame = +3 Query: 210 EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIV 383 +P+P DA K+F+G I +E L+E FE YG V + ++RDR+ +++G F+ Sbjct: 34 QPDP----DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVT 89 Query: 384 FADPAVAERVIMEKHMID--GRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVG 557 F A H I M + P D +++ +K+F+G Sbjct: 90 FYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKS------------NAVEDRKLFIG 137 Query: 558 GLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 ++ E D R F FG I + ++ + RG F+T+ + A+ K H+ Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPD-GLSRGCAFVTFSTRAMAQNAI-KAMHQ 194 Score = 34.3 bits (77), Expect = 1.9 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 425 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 481 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 482 -QAMNGFQIGMKR 493
>Q5R8Y8:CELF2_PONPY CUG-BP- and ETR-3-like factor 2 - Pongo pygmaeus (Orangutan)| Length = 508 Score = 52.8 bits (125), Expect = 5e-06 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 4/179 (2%) Frame = +3 Query: 210 EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIV 383 +P+P DA K+F+G I +E L+E FE YG V + ++RDR+ +++G F+ Sbjct: 34 QPDP----DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVT 89 Query: 384 FADPAVAERVIMEKHMID--GRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVG 557 F A H I M + P D +++ +K+F+G Sbjct: 90 FYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKS------------NAVEDRKLFIG 137 Query: 558 GLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 ++ E D R F FG I + ++ + RG F+T+ + A+ K H+ Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPD-GLSRGCAFVTFSTRAMAQNAI-KAMHQ 194 Score = 34.3 bits (77), Expect = 1.9 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 425 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 481 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 482 -QAMNGFQIGMKR 493
>Q9Z0H4:CELF2_MOUSE CUG-BP- and ETR-3-like factor 2 - Mus musculus (Mouse)| Length = 508 Score = 52.8 bits (125), Expect = 5e-06 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 4/179 (2%) Frame = +3 Query: 210 EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIV 383 +P+P DA K+F+G I +E L+E FE YG V + ++RDR+ +++G F+ Sbjct: 34 QPDP----DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVT 89 Query: 384 FADPAVAERVIMEKHMID--GRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVG 557 F A H I M + P D +++ +K+F+G Sbjct: 90 FYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKS------------NAVEDRKLFIG 137 Query: 558 GLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 ++ E D R F FG I + ++ + RG F+T+ + A+ K H+ Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPD-GLSRGCAFVTFSTRAMAQNAI-KAMHQ 194 Score = 34.3 bits (77), Expect = 1.9 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 425 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 481 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 482 -QAMNGFQIGMKR 493
>O95319:CELF2_HUMAN CUG-BP- and ETR-3-like factor 2 - Homo sapiens (Human)| Length = 508 Score = 52.8 bits (125), Expect = 5e-06 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 4/179 (2%) Frame = +3 Query: 210 EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIV 383 +P+P DA K+F+G I +E L+E FE YG V + ++RDR+ +++G F+ Sbjct: 34 QPDP----DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVT 89 Query: 384 FADPAVAERVIMEKHMID--GRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVG 557 F A H I M + P D +++ +K+F+G Sbjct: 90 FYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKS------------NAVEDRKLFIG 137 Query: 558 GLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 ++ E D R F FG I + ++ + RG F+T+ + A+ K H+ Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPD-GLSRGCAFVTFSTRAMAQNAI-KAMHQ 194 Score = 34.3 bits (77), Expect = 1.9 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 425 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 481 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 482 -QAMNGFQIGMKR 493
>Q10422:YDC1_SCHPO Uncharacterized RNA-binding protein C25G10.01 - Schizosaccharomyces| pombe (Fission yeast) Length = 297 Score = 52.0 bits (123), Expect = 9e-06 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 4/89 (4%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVDKA 713 +FV G+AS + E + + F +FGT+T V +M + T+ RGFGF+++ ++ A+D Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162 Query: 714 LFKTFHELNGKMVEVKRAVPKELSPGPSM 800 + F+ + + KR+ P +PG M Sbjct: 163 NSQEFYGRVLNVQKAKRSRPHSPTPGKYM 191 Score = 50.8 bits (120), Expect = 2e-05 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Frame = +3 Query: 177 DPFPGSTGW-K*EPE--PEMEADAGK-LFIGGISWDTNEDRLREYFEKYGEVVEAVIMRD 344 DP ST K EP+ PE + G LF+ GI+ ED L++ F K+G V IMR+ Sbjct: 76 DPNNESTALDKKEPQSAPEGSENLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMRE 135 Query: 345 RATGRARGFGFIVFADPAVAERVI--MEKHMIDGRMVEAKKA 464 T +RGFGF+ F+ A I + GR++ +KA Sbjct: 136 PVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGRVLNVQKA 177
>Q24491:RX21_DROME RNA-binding protein Rsf1 - Drosophila melanogaster (Fruit fly)| Length = 197 Score = 52.0 bits (123), Expect = 9e-06 Identities = 59/211 (27%), Positives = 80/211 (37%), Gaps = 4/211 (1%) Frame = +3 Query: 534 RTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 713 R +++VG L V + D F ++G + V + ++ P GF F+ ++ D +KA Sbjct: 5 RGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN-----PPGFAFVEFEHRDDAEKA 59 Query: 714 L-FKTFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSF-LNGYTQGYSPSP 887 EL G + V E+S G + GG R F + T G S Sbjct: 60 CDILNGSELLGSQLRV------EISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGS--- 110 Query: 888 VGGYGMRMDARFGLLSGGRSSYPSFGGGYGIGMNFDPGMNPGIGGSSNFNNSVQY--GRQ 1061 GG G R G SS GY G + N GG S FN Y GR Sbjct: 111 -GGGGFRQRGSSG------SSSRHTERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRD 163 Query: 1062 INPYYSGNSGRYNSNISYGGVNDNSGSVFNS 1154 + Y SG+S SYG S F S Sbjct: 164 SSRYSSGSSA------SYGRTGGQSAGRFRS 188
>Q6NVP7:PABP2_XENTR Polyadenylate-binding protein 2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 296 Score = 52.0 bits (123), Expect = 9e-06 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 6/110 (5%) Frame = +3 Query: 162 RQPARDPFPGSTGWK*EP-----EPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVE 326 +Q P PG+ G P E +MEADA +++G + + + L +F G V Sbjct: 136 KQMNMSPPPGNAG----PVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNR 191 Query: 327 AVIMRDRATGRARGFGFIVFAD-PAVAERVIMEKHMIDGRMVEAKKAVPR 473 I+ D+ TG +GF +I F+D +V + +++ + GR + K VP+ Sbjct: 192 VTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQI---KVVPK 238 Score = 44.7 bits (104), Expect = 0.001 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 + I+VG + T + +F G++ V ++ D T P+GF +I + +++V +L Sbjct: 163 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLA 222 Query: 720 KTFHELNGKMVEVKRAVPKELS-PGPSMRSPAGGINYVMNRANSF--LNGYTQGYSPSPV 890 G+ ++V VPK + PG S RA+S+ + + GY+P P Sbjct: 223 LDESLFRGRQIKV---VPKRTNRPGISTTDRGFPRARYRARASSYSSRSRFYSGYTPRPR 279 Query: 891 G 893 G Sbjct: 280 G 280
>Q7ZXB8:PAB2B_XENLA Polyadenylate-binding protein 2-B - Xenopus laevis (African clawed| frog) Length = 295 Score = 52.0 bits (123), Expect = 9e-06 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Frame = +3 Query: 162 RQPARDPFPGSTGWK*-EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIM 338 +Q P PG+ G E +MEADA +++G + + + L +F G V I+ Sbjct: 135 KQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTIL 194 Query: 339 RDRATGRARGFGFIVFAD-PAVAERVIMEKHMIDGRMVEAKKAVPR 473 D+ TG +GF +I F+D +V + +++ + GR + K VP+ Sbjct: 195 CDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQI---KVVPK 237 Score = 44.3 bits (103), Expect = 0.002 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Frame = +3 Query: 540 KKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALF 719 + I+VG + T + +F G++ V ++ D T P+GF +I + +++V +L Sbjct: 162 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLA 221 Query: 720 KTFHELNGKMVEVKRAVPKELS-PGPSMRSPAGGINYVMNRANSF--LNGYTQGYSPSPV 890 G+ ++V VPK + PG S RA+S+ + + GY+P P Sbjct: 222 LDESLFRGRQIKV---VPKRTNRPGISTTDRGFPRARYRARASSYSSRSRFYSGYTPRPR 278 Query: 891 G 893 G Sbjct: 279 G 279
>Q5R9L3:G3BP2_PONPY Ras GTPase-activating protein-binding protein 2 - Pongo pygmaeus| (Orangutan) Length = 482 Score = 52.0 bits (123), Expect = 9e-06 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Frame = +3 Query: 159 PRQPARDPFPGSTGWK*EPEPEMEA----DAGKLFIGGISWDTNEDRLREYFEKYGEVVE 326 P P R P PG + D+ +LF+G + D +E+ L+E+F +G VVE Sbjct: 300 PGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVE 359 Query: 327 AVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 I G+ FGF+VF D +R+++ K Sbjct: 360 LRINTKGVGGKLPNFGFVVFDDSEPVQRILIAK 392 Score = 36.2 bits (82), Expect = 0.49 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 1/148 (0%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 ++FVG L + E + + +F FG + ++ + + FGF+ +D + V + L Sbjct: 332 QLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIA 391 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 G EV+ V ++ + R GG + +R + N G VGG Sbjct: 392 KPIMFRG---EVRLNVEEKKTRAARERETRGGGD---DRRDIRRNDRGPGGPRGIVGGGM 445 Query: 903 MR-MDARFGLLSGGRSSYPSFGGGYGIG 983 MR D R GG + G G G G Sbjct: 446 MRDRDGRGPPPRGGMAQ--KLGSGRGTG 471
>P97379:G3BP2_MOUSE Ras GTPase-activating protein-binding protein 2 - Mus musculus| (Mouse) Length = 482 Score = 52.0 bits (123), Expect = 9e-06 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Frame = +3 Query: 159 PRQPARDPFPGSTGWK*EPEPEMEA----DAGKLFIGGISWDTNEDRLREYFEKYGEVVE 326 P P R P PG + D+ +LF+G + D +E+ L+E+F +G VVE Sbjct: 300 PGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVE 359 Query: 327 AVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 I G+ FGF+VF D +R+++ K Sbjct: 360 LRINTKGVGGKLPNFGFVVFDDSEPVQRILIAK 392 Score = 36.2 bits (82), Expect = 0.49 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 1/148 (0%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 ++FVG L + E + + +F FG + ++ + + FGF+ +D + V + L Sbjct: 332 QLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIA 391 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 G EV+ V ++ + R GG + +R + N G VGG Sbjct: 392 KPIMFRG---EVRLNVEEKKTRAARERETRGGGD---DRRDIRRNDRGPGGPRGIVGGGM 445 Query: 903 MR-MDARFGLLSGGRSSYPSFGGGYGIG 983 MR D R GG + G G G G Sbjct: 446 MRDRDGRGPPPRGGMTQ--KLGSGRGTG 471
>Q9UN86:G3BP2_HUMAN Ras GTPase-activating protein-binding protein 2 - Homo sapiens| (Human) Length = 482 Score = 52.0 bits (123), Expect = 9e-06 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Frame = +3 Query: 159 PRQPARDPFPGSTGWK*EPEPEMEA----DAGKLFIGGISWDTNEDRLREYFEKYGEVVE 326 P P R P PG + D+ +LF+G + D +E+ L+E+F +G VVE Sbjct: 300 PGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVE 359 Query: 327 AVIMRDRATGRARGFGFIVFADPAVAERVIMEK 425 I G+ FGF+VF D +R+++ K Sbjct: 360 LRINTKGVGGKLPNFGFVVFDDSEPVQRILIAK 392 Score = 36.2 bits (82), Expect = 0.49 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 1/148 (0%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 ++FVG L + E + + +F FG + ++ + + FGF+ +D + V + L Sbjct: 332 QLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIA 391 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSPSPVGGYG 902 G EV+ V ++ + R GG + +R + N G VGG Sbjct: 392 KPIMFRG---EVRLNVEEKKTRAARERETRGGGD---DRRDIRRNDRGPGGPRGIVGGGM 445 Query: 903 MR-MDARFGLLSGGRSSYPSFGGGYGIG 983 MR D R GG + G G G G Sbjct: 446 MRDRDGRGPPPRGGMAQ--KLGSGRGTG 471
>Q9YGW7:DAZL_DANRE Deleted in azoospermia-like - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 229 Score = 52.0 bits (123), Expect = 9e-06 Identities = 25/86 (29%), Positives = 47/86 (54%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 PE + LF+GGI +E+ +RE+F KYG V E I+ R G +G+GF+ F++ Sbjct: 40 PEGKMTPNTLFVGGIDMKVDENEIREFFAKYGSVKEVKIITYRG-GICKGYGFVYFSEDV 98 Query: 399 VAERVIMEKHMIDGRMVEAKKAVPRD 476 + ++ + G+ ++ A+ ++ Sbjct: 99 DIQTIVDQPISFKGKKLKLGPAIMKE 124 Score = 39.7 bits (91), Expect = 0.044 Identities = 28/97 (28%), Positives = 52/97 (53%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +FVGG+ V E + R +F ++G++ +V ++ + +G+GF+ Y SED + + Sbjct: 49 LFVGGIDMKVDENEIREFFAKYGSVKEVKII-TYRGGICKGYGFV-YFSEDVDIQTIVDQ 106 Query: 726 FHELNGKMVEVKRAVPKELSPGPSMRSPAGGINYVMN 836 GK +++ A+ KE S S+ SP G + +N Sbjct: 107 PISFKGKKLKLGPAIMKERS-SRSVSSPMIGPSQWVN 142
>Q4V7Y4:DAZLB_XENLA Deleted in azoospermia-like-B - Xenopus laevis (African clawed| frog) Length = 286 Score = 52.0 bits (123), Expect = 9e-06 Identities = 25/83 (30%), Positives = 48/83 (57%) Frame = +3 Query: 219 PEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPA 398 PE + +F+GGI +E +R++F ++G V E I+ DR TG ++G+GFI F+D Sbjct: 26 PEGKIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSDEV 84 Query: 399 VAERVIMEKHMIDGRMVEAKKAV 467 ++++ + G+ ++ A+ Sbjct: 85 DIQKIVKSQISFHGKKLKLGPAI 107 Score = 49.7 bits (117), Expect = 4e-05 Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 5/123 (4%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +FVGG+ T+ E + R +F +FG + +V ++ D T +G+GFI++ E + K + K+ Sbjct: 35 VFVGGIDITMDEIEIRDFFTRFGNVKEVKIITD-RTGVSKGYGFISFSDEVDIQK-IVKS 92 Query: 726 FHELNGKMVEVKRAVPK---ELSPGPSMRSPAGGINYVMNRANSFLNGYTQGYSP--SPV 890 +GK +++ A+ K + P P + S ++ N N+ + Y Q +SP SP+ Sbjct: 93 QISFHGKKLKLGPAIRKICTYVQPRPVVLSHPTPFHHAWNNQNA--DSYIQ-HSPIVSPI 149 Query: 891 GGY 899 Y Sbjct: 150 TQY 152
>Q20870:DAZ1_CAEEL DAZ protein 1 - Caenorhabditis elegans| Length = 499 Score = 52.0 bits (123), Expect = 9e-06 Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 9/128 (7%) Frame = +3 Query: 543 KIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 722 +IFVGG ++ TE + R +FE+F + DV ++ + Q +G+GFIT+++ED ++ Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQ-SKGYGFITFETEDQAEE---- 122 Query: 723 TFHELNGKMVEVKRAVPKELSPGPSMR---SPAGGINYVMNRANSFLN------GYTQGY 875 +L K +E + ++L+ GP++R S + +Y + + + Y Sbjct: 123 -IRKLTPKQLEFR---SRKLNLGPAIRKINSNSFQPSYAIATPSQLVAASPGPFSYAIPA 178 Query: 876 SPSPVGGY 899 SPSP GY Sbjct: 179 SPSPYSGY 186 Score = 45.8 bits (107), Expect = 6e-04 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%) Frame = +3 Query: 147 LPQDPRQPARDP---FPGSTGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGE 317 +PQ P P +P P E ++F+GG T E LRE+FEK+ Sbjct: 33 MPQTPTSLPSTPIQLYPTGAAALIPAPPTYELIPNRIFVGGFPTSTTETELREHFEKFFA 92 Query: 318 VVEAVIMRDRATGRARGFGFIVFADPAVAERV 413 V + +++ G+++G+GFI F AE + Sbjct: 93 VKDVKMVKS-LDGQSKGYGFITFETEDQAEEI 123
>Q6P0B1:CELF2_DANRE CUG-BP- and ETR-3-like factor 2 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 514 Score = 52.0 bits (123), Expect = 9e-06 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 4/179 (2%) Frame = +3 Query: 210 EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIV 383 +P+P DA K+F+G I +E L+E FE YG V + I+RDR+ +++G F+ Sbjct: 38 QPDP----DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVT 93 Query: 384 FADPAVAERVIMEKHMID--GRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVG 557 F A H I M + P D +++ +K+F+G Sbjct: 94 FYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKS------------NAVEDRKLFIG 141 Query: 558 GLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 ++ E D R F +G I + ++ + RG F+T+ + A+ K H+ Sbjct: 142 MVSKKCNENDIRVMFSPYGQIEECRILRGPD-GLSRGCAFVTFSTRAMAQNAI-KAMHQ 198 Score = 34.7 bits (78), Expect = 1.4 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 431 LFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 487 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 488 -QAMNGFQIGMKR 499
>Q5F3T7:CELF1_CHICK CUG-BP- and ETR-3-like factor 1 - Gallus gallus (Chicken)| Length = 489 Score = 52.0 bits (123), Expect = 9e-06 Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 5/174 (2%) Frame = +3 Query: 228 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATG--RARGFGFIVFADPAV 401 + DA K+F+G + E LRE FE+YG V E ++RDR+ +++G F+ F Sbjct: 12 DLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKA 71 Query: 402 ---AERVIMEKHMIDGRMVEAKKAVPRDDQQALXXXXXXXXXXXXXXRTKKIFVGGLAST 572 A+ + ++ G M + P D ++ +K+F+G ++ Sbjct: 72 ALEAQNALHNMKILPG-MHHPIQMKPADSEK------------NNAVEDRKLFIGMISKK 118 Query: 573 VTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHE 734 E D R F FG I + ++ + RG F+T+ + A+ + K H+ Sbjct: 119 CNENDIRVMFSPFGQIEECRILRGPD-GLSRGCAFVTFTTR-AMAQTAIKAMHQ 170 Score = 35.0 bits (79), Expect = 1.1 Identities = 19/73 (26%), Positives = 32/73 (43%) Frame = +3 Query: 546 IFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 725 +F+ L + D F FG + V D T + FGF++YD+ + A+ Sbjct: 406 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI--- 462 Query: 726 FHELNGKMVEVKR 764 +NG + +KR Sbjct: 463 -QSMNGFQIGMKR 474
>Q6PFR5:TRA2A_MOUSE Transformer-2 protein homolog - Mus musculus (Mouse)| Length = 281 Score = 51.6 bits (122), Expect = 1e-05 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 22/130 (16%) Frame = +3 Query: 552 VGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY----DSEDAVDKALF 719 V GL+ TE D R F ++G ++ V V+YD T R RGF F+ + DS++A+++A Sbjct: 121 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERA-- 178 Query: 720 KTFHELNGKMVEVKRAVPKEL---SPGPSMRSP---------------AGGINYVMNRAN 845 EL+G+ + V ++ K +PG M P GG R + Sbjct: 179 -NGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGGGGRRRDS 237 Query: 846 SFLNGYTQGY 875 + GY +GY Sbjct: 238 YYDRGYDRGY 247 Score = 43.5 bits (101), Expect = 0.003 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Frame = +3 Query: 150 PQDPRQPARDPFPGS-----TGWK*EPEPEMEADAGKLFIGGISWDTNEDRLREYFEKYG 314 P+ R+ +R P S TG + P+P L + G+S T E LRE F +YG Sbjct: 87 PEYRRRRSRSHSPMSNRRRHTGSRANPDPNT-----CLGVFGLSLYTTERDLREVFSRYG 141 Query: 315 EVVEAVIMRDRATGRARGFGFIVF 386 + ++ D+ TGR+RGF F+ F Sbjct: 142 PLSGVNVVYDQRTGRSRGFAFVYF 165 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 334,042,037 Number of extensions: 7699734 Number of successful extensions: 31969 Number of sequences better than 10.0: 676 Number of HSP's gapped: 29582 Number of HSP's successfully gapped: 1243 Length of query: 629 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 510 Effective length of database: 68,045,334 Effective search space: 34703120340 Effective search space used: 34703120340 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
