ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf73m02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os09g24840:12009.t02165:unspliced-genomic GAST1 protein ... 145 1e-38
2LOC_Os06g15620:12006.t01435:unspliced-genomic GAST1 protein ... 133 1e-30
3LOC_Os05g31280:12005.t02724:unspliced-genomic GAST1 protein ... 123 2e-27
4LOC_Os03g14550:12003.t01244:unspliced-genomic gibberellin-re... 108 4e-23
5LOC_Os05g35690:12005.t03162:unspliced-genomic gibberellin-re... 80 1e-14
6LOC_Os03g55290:12003.t04793:unspliced-genomic gibberellin-re... 74 1e-12
7LOC_Os04g39110:12004.t03481:unspliced-genomic gibberellin-re... 54 2e-08
8LOC_Os06g51320:12006.t04815:unspliced-genomic gibberellin-re... 51 1e-05
9LOC_Os06g51330:12006.t04816:unspliced-genomic expressed protein 48 7e-05
10LOC_Os03g41060:12003.t03523:unspliced-genomic gibberellin-re... 48 9e-05
11LOC_Os07g40240:12007.t03684:unspliced-genomic GIR1, putative... 37 0.13
12LOC_Os07g28120:12007.t02503:unspliced-genomic retrotransposo... 35 0.90
13LOC_Os08g43060:12008.t04269:unspliced-genomic expressed protein 34 1.7
14LOC_Os03g50364:12003.t04378:unspliced-genomic AT hook motif ... 33 2.3
15LOC_Os06g41710:12006.t03863:unspliced-genomic MORC family CW... 33 2.3
16LOC_Os06g40450:12006.t03741:unspliced-genomic WDL1, putative... 33 2.3
17LOC_Os06g03560:12006.t00248:unspliced-genomic oligopeptide t... 33 2.3
18LOC_Os01g25460:12001.t02262:unspliced-genomic extensin-like ... 33 3.2
19LOC_Os09g01340:12009.t00036:unspliced-genomic retrotransposo... 32 4.4
20LOC_Os10g17010:12010.t01262:unspliced-genomic hypothetical p... 32 4.4
21LOC_Os01g42710:12001.t03788:unspliced-genomic LSD1 zinc fing... 32 4.4
22LOC_Os03g53760:12003.t04694:unspliced-genomic helicase assoc... 26 5.3
23LOC_Os05g07632:12005.t04653:unspliced-genomic catalytic/ hyd... 32 6.1
24LOC_Os01g11740:12001.t01044:unspliced-genomic esterase precu... 32 6.1
25LOC_Os10g41280:12010.t03364:unspliced-genomic hypothetical p... 26 8.1
26LOC_Os08g40170:12008.t03748:unspliced-genomic cell division ... 31 8.3
27LOC_Os12g18770:12012.t01725:unspliced-genomic oxysterol bind... 31 8.3
28LOC_Os11g14520:12011.t01283:unspliced-genomic conserved hypo... 31 8.3
29LOC_Os03g36620:12003.t03131:unspliced-genomic retrotransposo... 31 8.3
30LOC_Os01g18744:12001.t01666:unspliced-genomic 3-N-debenzoyl-... 25 9.9

>LOC_Os09g24840:12009.t02165:unspliced-genomic GAST1 protein precursor, putative, expressed|
          Length = 1548
 Score =  145 bits (312), Expect(4) = 1e-38
 Identities = 48/61 (78%), Positives = 52/61 (85%)
 Frame = +1 / +1

                                                                        
Query: 232  QCKPVCEYRCSDTKYRKPCLFFCNKCCNTCLCVPSGFYGHKYECPCYNNWKTKEGRPKCP 411
            +C P C YRCS T+Y+KPCLFFCNKCCN CLCVPSG YG+K ECPCYNNWKTK G PKCP
Sbjct: 1123 ECSPQCAYRCSQTQYKKPCLFFCNKCCNACLCVPSGLYGNKGECPCYNNWKTKRGGPKCP 1302

             
Query: 412  * 414
            *
Sbjct: 1303 * 1305



 Score = 29.5 bits (58), Expect(4) = 1e-38
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1 / +2

                             
Query: 151 VSASGTEEHEDNVYRVSK 204
           ++   T EH+DNVY+VSK
Sbjct: 311 LAKGSTSEHDDNVYQVSK 364



 Score = 24.9 bits (48), Expect(4) = 1e-38
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3 / +1

                                  
Query: 27  TSQRLIFWQLNSLERNGPGWQAT 95
           T+  ++  QL  L+RNG GW AT
Sbjct: 82  TNAVVLSLQLVELQRNGFGW*AT 150



 Score = 22.6 bits (43), Expect(4) = 1e-38
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1 / +3

                      
Query: 202 KGGQGSLKIYQ 234
           +GGQGSLK Y+
Sbjct: 471 QGGQGSLKSYR 503



 Score =  113 bits (241), Expect(3) = 2e-25
 Identities = 47/59 (79%), Positives = 49/59 (83%)
 Frame = -3 / -2

                                                                       
Query: 410  GHLGRPSLVFQLL*QGHSYLWP*KPDGTHRQVLQHLLQKKRHGFLYLVSLHRYSHTGLH 234
            GHLG P LVFQLL*QGHS L P*+PDGT RQ LQHLLQKKRHGFLY V LHRY+H G H
Sbjct: 1301 GHLGPPRLVFQLL*QGHSPLLP*RPDGTQRQALQHLLQKKRHGFLYCVWLHRYAHCGEH 1125



 Score = 24.0 bits (46), Expect(3) = 2e-25
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -3 / -1

                      
Query: 95  SSLPARAISLK 63
           SSLPA+AISLK
Sbjct: 150 SSLPAKAISLK 118



 Score = 21.7 bits (41), Expect(3) = 2e-25
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3 / -3

                   
Query: 227 ILRLPCPP 204
           + RLPCPP
Sbjct: 496 LFRLPCPP 473



 Score = 49.2 bits (101), Expect(2) = 3e-05
 Identities = 22/29 (75%), Positives = 23/29 (79%)
 Frame = +3 / +3

                                         
Query: 327  RAVGLLRPQVRVPLLQQLEDQGGTPQVPL 413
            RAVG LR Q RVPLLQQLEDQ   PQVP+
Sbjct: 1218 RAVGPLRQQGRVPLLQQLEDQARRPQVPV 1304



 Score = 21.7 bits (41), Expect(2) = 3e-05
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2 / +3

                   
Query: 71  KWPWLAGY 94
           KW WL GY
Sbjct: 126 KWLWLVGY 149



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>LOC_Os06g15620:12006.t01435:unspliced-genomic GAST1 protein precursor, putative, expressed|
          Length = 1130

 Score =  133 bits (286), Expect = 1e-30
 Identities = 46/69 (66%), Positives = 54/69 (78%)
 Frame = +1 / +1

                                                                       
Query: 208 GQGSLKIYQCKPVCEYRCSDTKYRKPCLFFCNKCCNTCLCVPSGFYGHKYECPCYNNWKT 387
           G G+L+ ++C P C  RCS+T+Y+K CL FCNKCC  CLCVP G YG+K  CPCYNNWKT
Sbjct: 253 GGGNLRPWECSPKCAGRCSNTQYKKACLTFCNKCCAKCLCVPPGTYGNKGACPCYNNWKT 432

                    
Query: 388 KEGRPKCP* 414
           KEG PKCP*
Sbjct: 433 KEGGPKCP* 459



 Score = 96.4 bits (204), Expect = 2e-19
 Identities = 45/79 (56%), Positives = 52/79 (65%)
 Frame = -3 / -1

                                                                       
Query: 443 QRRGRILFCN*GHLGRPSLVFQLL*QGHSYLWP*KPDGTHRQVLQHLLQKKRHGFLYLVS 264
           +RR +    +*GHLG PSLVFQLL*QG + L P* P GTHR + QHLLQ  RH FLY V 
Sbjct: 488 KRRKKKRHAS*GHLGPPSLVFQLL*QGQAPLLP*VPGGTHRHLAQHLLQNVRHAFLYCVL 309

                              
Query: 263 LHRYSHTGLHWYILRLPCP 207
            H  +H G H + LR P P
Sbjct: 308 EHLPAHLGEHSHGLRFPPP 252



 Score = 46.4 bits (95), Expect = 2e-04
 Identities = 21/29 (72%), Positives = 22/29 (75%)
 Frame = +3 / +3

                                        
Query: 327 RAVGLLRPQVRVPLLQQLEDQGGTPQVPL 413
           RA   LR Q R+PLLQQLEDQG  PQVPL
Sbjct: 372 RAARHLRQQGRLPLLQQLEDQGRRPQVPL 458



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>LOC_Os05g31280:12005.t02724:unspliced-genomic GAST1 protein precursor, putative, expressed|
          Length = 1369

 Score =  123 bits (263), Expect = 2e-27
 Identities = 42/62 (67%), Positives = 47/62 (75%)
 Frame = +1 / +2

                                                                        
Query: 232  QCKPVCEYRCSDTKYRKPCLFFCNKCCNTCLCVPSGFYGHKYECPCYNNWKTKEGRPKCP 411
            +C   C YRCS T YRKPC+FFC KCC +CLCV  G YG+K  CPCYN+WKTK G PKCP
Sbjct: 815  ECGGRCAYRCSATAYRKPCMFFCQKCCASCLCVLPGTYGNKQSCPCYNDWKTKRGGPKCP 994

              
Query: 412  *L 417
            *L
Sbjct: 995  *L 1000



 Score = 83.5 bits (176), Expect = 2e-15
 Identities = 37/61 (60%), Positives = 39/61 (63%)
 Frame = -3 / -2

                                                                       
Query: 416 N*GHLGRPSLVFQLL*QGHSYLWP*KPDGTHRQVLQHLLQKKRHGFLYLVSLHRYSHTGL 237
           N*GHLG P LVFQ L*QGH  L P* P  T RQ  QH  QK  HGFLY V+ H Y+H   
Sbjct: 999 N*GHLGPPRLVFQSL*QGHDCLLP*VPGSTQRQEAQHFWQKNMHGFLYAVAEHLYAHRPP 820

            
Query: 236 H 234
           H
Sbjct: 819 H 817



 Score = 46.0 bits (94), Expect = 3e-04
 Identities = 21/30 (70%), Positives = 22/30 (73%)
 Frame = +3 / +1

                                         
Query: 327 RAVGLLRPQVRVPLLQQLEDQGGTPQVPLV 416
           RA G LR Q  VPLLQ+LEDQ   PQVPLV
Sbjct: 910 RAAGDLRQQAVVPLLQRLEDQARRPQVPLV 999



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>LOC_Os03g14550:12003.t01244:unspliced-genomic gibberellin-regulated protein 2 precursor, putative|
          Length = 639

 Score =  108 bits (231), Expect = 4e-23
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = +1 / +1

                                                                       
Query: 232 QCKPVCEYRCSDTKYRKPCLFFCNKCCNTCLCVPSGFYGHKYECPCYNNWKTKEGRPKCP 411
           +C   C+YRCS TK ++PCL +CN CC  CLCVPSG  G+K ECPCYNN K+ +G  KCP
Sbjct: 457 ECPQKCDYRCSATKRQEPCLKYCNICCQKCLCVPSGTSGNKEECPCYNNLKSSQGNSKCP 636

            
Query: 412 * 414
           *
Sbjct: 637 * 639



 Score = 63.4 bits (132), Expect = 2e-09
 Identities = 29/55 (52%), Positives = 35/55 (63%)
 Frame = -3 / -2

                                                                  
Query: 410 GHLGRPSLVFQLL*QGHSYLWP*KPDGTHRQVLQHLLQKKRHGFLYLVSLHRYSH 246
           GHL  P L+F+LL* GHS L+P  PDGTH+   Q +LQ  RHG    V+  R SH
Sbjct: 635 GHLELPWLLFKLL*HGHSSLFPDVPDGTHKHFWQQILQYLRHGSWRFVAEQR*SH 471



 Score = 35.9 bits (72), Expect = 0.35
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +3 / +3

                                        
Query: 327 RAVGLLRPQVRVPLLQQLEDQGGTPQVPL 413
           R++  +R Q RVP+LQQ E+Q G  QVP+
Sbjct: 552 RSIRHVREQGRVPMLQQFEEQPGQFQVPM 638



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>LOC_Os05g35690:12005.t03162:unspliced-genomic gibberellin-regulated protein 2 precursor, putative, expressed|
          Length = 879

 Score = 80.3 bits (169), Expect = 1e-14
 Identities = 32/68 (47%), Positives = 36/68 (52%)
 Frame = +1 / +3

                                                                       
Query: 235 CKPVCEYRCSDTKYRKPCLFFCNKCCNTCLCVPSGFYGHKYECPCYNNWKTKEGRPKCP* 414
           C   C YRCS +   K CL  C  CC  C CVP G  G++  CPCY N  T  GR KCP*
Sbjct: 405 CGAKCGYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNENVCPCYANMTTHNGRHKCP* 584

                   
Query: 415 LQKRILPR 438
             + I  R
Sbjct: 585 SSRPIYHR 608



 Score = 44.1 bits (90), Expect = 0.001
 Identities = 24/55 (43%), Positives = 27/55 (49%)
 Frame = -3 / -3

                                                                  
Query: 410 GHLGRPSLVFQLL*QGHSYLWP*KPDGTHRQVLQHLLQKKRHGFLYLVSLHRYSH 246
           GHL RP  V  L *QG ++  P  P GT  Q  Q +    RH F     LHRY H
Sbjct: 580 GHLWRPLWVVMLA*QGQTFSLPEVPGGTQPQRWQQVPHALRHIFGRPDLLHRYPH 416



 Score = 34.1 bits (68), Expect = 1.2
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3 / +2

                                         
Query: 327 RAVGLLRPQVRVPLLQQLEDQGGTPQVPLV 416
           RA G LR + R+PLL+Q +     PQVPL+
Sbjct: 497 RAAGHLRQRERLPLLRQHDHPQRPPQVPLI 586



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>LOC_Os03g55290:12003.t04793:unspliced-genomic gibberellin-regulated protein 2 precursor, putative, expressed|
          Length = 786

 Score = 73.9 bits (155), Expect = 1e-12
 Identities = 27/59 (45%), Positives = 32/59 (54%)
 Frame = +1 / +3

                                                                      
Query: 235 CKPVCEYRCSDTKYRKPCLFFCNKCCNTCLCVPSGFYGHKYECPCYNNWKTKEGRPKCP 411
           C   C+ RCS       CL +C  CC +C CVPSG  G+K ECPCY +  T  G  K P
Sbjct: 267 CDGKCKVRCSKASRHDDCLKYCGVCCASCNCVPSGTAGNKDECPCYRDMTTGHGARKRP 443



 Score = 36.3 bits (73), Expect = 0.25
 Identities = 23/55 (41%), Positives = 23/55 (41%)
 Frame = -3 / -3

                                                                  
Query: 410 GHLGRPSLVFQLL*QGHSYLWP*KPDGTHRQVLQHLLQKKRHGFLYLVSLHRYSH 246
           G L  P  V    *QGHS L P  PDGT  Q  QH  Q  R     L   H   H
Sbjct: 442 GLLRAPWPVVMSR*QGHSSLLPAVPDGTQLQEAQHTPQYLRQSSCLLAFEHLTLH 278



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>LOC_Os04g39110:12004.t03481:unspliced-genomic gibberellin-regulated protein 1 precursor, putative, expressed|
          Length = 916

 Score = 53.8 bits (111), Expect(2) = 2e-08
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +1 / +3

                                                         
Query: 226 IYQCKPVCEYRCSDTKYRKPCLFFCNKCCNTCLCVPSGFYGHKYEC 363
           +  C   C+ RCS+  ++K C   C  CC+ C CVP+G  G++  C
Sbjct: 447 VADCVGACDARCSEHSHKKRCSRSCLTCCSACRCVPAGTAGNRETC 584



 Score = 24.9 bits (48), Expect(2) = 2e-08
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1 / +3

                              
Query: 367 CYNNWKTKEGRPKCP*LQK 423
           CY +W +     KCP* ++
Sbjct: 591 CYTDWVSHNNMTKCP*AKR 647



 Score = 41.8 bits (85), Expect = 0.006
 Identities = 18/34 (52%), Positives = 21/34 (61%)
 Frame = -3 / -1

                                             
Query: 347 P*KPDGTHRQVLQHLLQKKRHGFLYLVSLHRYSH 246
           P  P GT R  LQH+ Q++ H FL   SLHR SH
Sbjct: 568 PAVPAGTQRHALQHVRQERLHRFLCECSLHRASH 467



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>LOC_Os06g51320:12006.t04815:unspliced-genomic gibberellin-regulated protein 1 precursor, putative, expressed|
          Length = 1366

 Score = 51.0 bits (105), Expect = 1e-05
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1 / +1

                                                     
Query: 214 GSLKIYQCKPVCEYRCSDTKYRKPCLFFCNKCCNTCLCVPSG 339
           G+ K   C+  C  RC++   ++ C   CN CCN C CVP G
Sbjct: 457 GTTKCIDCQGTCSGRCANNWKKEMCNKMCNVCCNRCNCVPPG 582



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>LOC_Os06g51330:12006.t04816:unspliced-genomic expressed protein|
          Length = 6340

 Score = 48.3 bits (99), Expect = 7e-05
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1 / -2

                                                   
Query: 223  KIYQCKPVCEYRCSDTKYRKPCLFFCNKCCNTCLCVPSG 339
            K   C+  C  RC++   ++ C   CN CCN C CVP G
Sbjct: 6333 KCIDCQGTCSGRCANNWKKEMCNKMCNVCCNRCNCVPPG 6217



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>LOC_Os03g41060:12003.t03523:unspliced-genomic gibberellin-regulated protein 1 precursor, putative, expressed|
          Length = 843

 Score = 47.8 bits (98), Expect = 9e-05
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +1 / +2

                                                   
Query: 286 CLFFCNKCCNTCLCVPSGFYGHKYECPCYNNWKTKEGRPK 405
           CL  C  CC  C CVP+G    + ECPCY +  T   R +
Sbjct: 347 CLRSCGLCCEECNCVPTGSGSTRDECPCYRDMLTAGPRKR 466



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>LOC_Os07g40240:12007.t03684:unspliced-genomic GIR1, putative, expressed|
          Length = 2155

 Score = 37.3 bits (75), Expect = 0.13
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1 / +1

                                     
Query: 325  CVPSGFYGHKYECPCYNNWKTKEGR 399
            CVPSG Y  K ECPCY +  + + R
Sbjct: 1336 CVPSGPYASKDECPCYRDMVSPKSR 1410



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>LOC_Os07g28120:12007.t02503:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3659

 Score = 34.5 bits (69), Expect = 0.90
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1 / +3

                                                 
Query: 262  CTGTRTPACTGIS*DCPVLPCSPGTHYPHALRSLRQT 152
            C  +R  +C G S* CP LPC   +  P   +SL Q+
Sbjct: 2127 CPPSRWCSCWGQS*RCPTLPCCKSSSVPCRAQSLGQS 2237



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>LOC_Os08g43060:12008.t04269:unspliced-genomic expressed protein|
          Length = 6709

 Score = 33.6 bits (67), Expect = 1.7
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1 / -3

                            
Query: 229 IS*DCPVLPCSPGTHYP 179
           +S DCP+LPCSPG+  P
Sbjct: 524 LSSDCPILPCSPGSCAP 474



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>LOC_Os03g50364:12003.t04378:unspliced-genomic AT hook motif family protein, expressed|
          Length = 5267

 Score = 33.1 bits (66), Expect = 2.3
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -3 / +3

                                      
Query: 257  RYSHTGLHWYILRLPCPPLLTRYTLS 180
            R+ H   HW   R P PPLL R TLS
Sbjct: 3915 RHGHLHFHWPPRRRPRPPLLPRGTLS 3992



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>LOC_Os06g41710:12006.t03863:unspliced-genomic MORC family CW-type zinc finger 3, putative, expressed|
          Length = 11267

 Score = 33.1 bits (66), Expect = 2.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2 / +1

                                             
Query: 614  VNSEYSINLGCCCGMCPPVFCDSRQLTRLYLKI 712
            +N  +S N+  C   C  +FC    L +LY+K+
Sbjct: 9733 INQPFSFNIWVCIFYCKGIFCGIPMLYQLYVKV 9831



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>LOC_Os06g40450:12006.t03741:unspliced-genomic WDL1, putative, expressed|
          Length = 4837

 Score = 33.1 bits (66), Expect = 2.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1 / +1

                                           
Query: 220 LKIYQCKPVCEYRCSDTKYRKPCLFFCNKCCN 315
           L++Y C+  C Y C      K  L+F ++CC+
Sbjct: 445 LQLYLCRLGCVYACGILDMSKQFLYFHDRCCS 540



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>LOC_Os06g03560:12006.t00248:unspliced-genomic oligopeptide transporter 9, putative, expressed|
          Length = 3649

 Score = 33.1 bits (66), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1 / +2

                          
Query: 292  FFCNKCCNTCLCVP 333
            +FCN CCN C C P
Sbjct: 2018 WFCNPCCNNCSCSP 2059



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>LOC_Os01g25460:12001.t02262:unspliced-genomic extensin-like protein, putative, expressed|
          Length = 1844

 Score = 32.7 bits (65), Expect = 3.2
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = -1 / +2

                                                    
Query: 271 WCRCTGTRTPACTGIS*DCPVLPCSPGTHYPHALRSLRQTP 149
           W     T    C G S  CP  PCS  T    A  S R++P
Sbjct: 449 WT*TPPTSRATCPGRSASCPTSPCSTSTPTASAASSRRRSP 571



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>LOC_Os09g01340:12009.t00036:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 5855

 Score = 32.2 bits (64), Expect = 4.4
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3 / -1

                                                            
Query: 527  NDLNAFILVYIVSTCNYPALAWPI*QWLQRRGRILFCN*GHLGRPSLV 384
            N      L  +V+  + P+ +W I  WL  R R+L C+ G  G   LV
Sbjct: 1919 NKFLGLTLAVLVTVTSTPSRSWRIFLWLPTRARLL*CDDGVFGFGVLV 1776



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>LOC_Os10g17010:12010.t01262:unspliced-genomic hypothetical protein|
          Length = 855

 Score = 32.2 bits (64), Expect = 4.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1 / +2

                                       
Query: 259 CSDTKYRKPCLFFCNKCCNTCLCVPSGF 342
           C  TK + P LFF     N C+C P G+
Sbjct: 479 CYCTKQQAPSLFFSISLTNLCMCKPFGW 562



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>LOC_Os01g42710:12001.t03788:unspliced-genomic LSD1 zinc finger family protein, expressed|
          Length = 7161

 Score = 32.2 bits (64), Expect = 4.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1 / +1

                                       
Query: 664  ACFLRFQAADAVVSENCSSDNWIMVIN 744
            ACFL F   D ++ E CS   W+  IN
Sbjct: 4591 ACFL*FSVFDMILKEECSCKLWLADIN 4671



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>LOC_Os03g53760:12003.t04694:unspliced-genomic helicase associated domain family protein, expressed|
          Length = 6991

 Score = 26.3 bits (51), Expect(2) = 5.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1 / -2

                                  
Query: 244  VCEYRCSDTKYRKPCLFFCNKC 309
            VC + C  T + K  + +CN C
Sbjct: 3312 VCRFLCLSTIHDKNNIIYCNTC 3247



 Score = 22.6 bits (43), Expect(2) = 5.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1 / -2

                      
Query: 310  CNTCLCVPSG 339
            CNTC C  SG
Sbjct: 3258 CNTCFCHVSG 3229



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>LOC_Os05g07632:12005.t04653:unspliced-genomic catalytic/ hydrolase, putative, expressed|
          Length = 3965

 Score = 31.8 bits (63), Expect = 6.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1 / +2

                                       
Query: 259  CSDTKYRKPCLFFCNKCCNTCLCVPSG 339
            CS +KY      +C+  C TCL  P+G
Sbjct: 3242 CSASKYLAVFRIYCSHVCQTCLFSPAG 3322



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>LOC_Os01g11740:12001.t01044:unspliced-genomic esterase precursor, putative, expressed|
          Length = 5761

 Score = 31.8 bits (63), Expect = 6.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1 / +1

                                          
Query: 307  CCNTCLCVPSGFYGHKYECPCYNNWKTKEG 396
            CC+   CV  GF G      CY  W  + G
Sbjct: 3289 CCSRTTCVLFGFLGRILNLACYCTWSKRFG 3378



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>LOC_Os10g41280:12010.t03364:unspliced-genomic hypothetical protein|
          Length = 1238

 Score = 26.3 bits (51), Expect(2) = 8.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2 / -3

                    
Query: 641 GCCCGMCPP 667
           GCCCG C P
Sbjct: 987 GCCCGFC*P 961



 Score = 22.1 bits (42), Expect(2) = 8.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1 / -1

                                
Query: 703 SENCSSDNWIMVINYFSNTKK 765
           +E CSS + + +++YF   K+
Sbjct: 836 TERCSSHSTLRLLHYFIKPKE 774



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>LOC_Os08g40170:12008.t03748:unspliced-genomic cell division control protein 2 homolog D, putative, expressed|
          Length = 1944

 Score = 31.3 bits (62), Expect = 8.3
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -3 / -3

                                                             
Query: 290 RHGFLYLVSLHRYSHTGLHWYILRLPCPPLLTRYTLSSCSSVPEADTLCS 141
           R  FL  VS++  +   + W  L  PC     R T  SC S+  +DT  S
Sbjct: 415 RMNFLRSVSMYSKTR*RMVWPSLFCPCLRSSRRTTCESCDSIRSSDTSLS 266



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>LOC_Os12g18770:12012.t01725:unspliced-genomic oxysterol binding protein, putative, expressed|
          Length = 9933

 Score = 31.3 bits (62), Expect = 8.3
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -1 / +2

                         
Query: 268  CRCTGTRTPACTG 230
            CRCTG R P CTG
Sbjct: 9683 CRCTGFREPRCTG 9721



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>LOC_Os11g14520:12011.t01283:unspliced-genomic conserved hypothetical protein|
          Length = 3506

 Score = 31.3 bits (62), Expect = 8.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1 / -2

                                            
Query: 220  LKIYQCKPVCEYRCSDTKYRKPCLFFCNKCCN 315
            L ++ C+P+C  R S+T  R+P   + +  CN
Sbjct: 1891 LSVHCCQPLCSQRLSETVERQPSSDYAS*PCN 1796



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>LOC_Os03g36620:12003.t03131:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1899

 Score = 31.3 bits (62), Expect = 8.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1 / +3

                                                
Query: 157  ASGTEEHEDNVYRVSKGGQGSLKIYQCKPVCEYRCS 264
            A+G  +H+  V R      G  + Y+C   C Y CS
Sbjct: 1614 AAGQADHKGEVQRNRSDPHGQWRRYEC*THCSYHCS 1721



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>LOC_Os01g18744:12001.t01666:unspliced-genomic 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase, putative, expressed|
          Length = 3985

 Score = 25.4 bits (49), Expect(2) = 9.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3 / +2

                                             
Query: 332  GTHRQVLQHLLQKKRHGFLYLVSLHRYSHTGLH 234
            G H+Q    LL++ R   L+L   HR    G H
Sbjct: 3122 GQHQQGQVRLLRRHRPPLLHLRRRHRQDVAGAH 3220



 Score = 22.6 bits (43), Expect(2) = 9.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1 / +2

                            
Query: 196  PGTHYPHALRSLRQTP 149
            PGTH P     LRQ P
Sbjct: 3236 PGTHLPRQPLLLRQHP 3283


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 291,044,067
Number of extensions: 4709440
Number of successful extensions: 19550
Number of sequences better than 10.0: 30
Length of query: 259
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 210
Effective length of database: 52,856,264
Effective search space: 11099815440
Effective search space used: 11099815440
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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