No.
Definition
Score (bits)
E Value
1 gb|AY738115.1| Triticum aestivum Ca2+ binding protein cbp1 (cbp1...
2837
0.0
2 ref|NM_001053922.1| Oryza sativa (japonica cultivar-group) Os02g...
1489
0.0
3 dbj|AK120177.1| Oryza sativa (japonica cultivar-group) cDNA clon...
1489
0.0
4 dbj|AK100424.1| Oryza sativa (japonica cultivar-group) cDNA clon...
1489
0.0
5 ref|NM_001059737.1| Oryza sativa (japonica cultivar-group) Os04g...
904
0.0
6 dbj|AK068782.1| Oryza sativa (japonica cultivar-group) cDNA clon...
904
0.0
7 gb|AY108574.2| Zea mays PCO113050 mRNA sequence
607
e-170
8 gb|AY110168.1| Zea mays CL28548_1 mRNA sequence
462
e-126
9 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
383
e-102
10 dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D...
383
e-102
11 dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic D...
383
e-102
12 gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence
270
3e-68
13 emb|CR855209.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
264
2e-66
14 emb|CR855207.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
264
2e-66
15 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
264
2e-66
16 emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,...
264
2e-66
17 ref|NM_105228.2| Arabidopsis thaliana calcium ion binding (AT1G6...
200
2e-47
18 gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence
127
2e-25
19 gb|AC189484.1| Brassica rapa subsp. pekinensis clone KBrB083K19,...
123
4e-24
20 ref|NM_115844.2| Arabidopsis thaliana unknown protein (AT3G59820...
107
2e-19
21 ref|NM_001035820.1| Arabidopsis thaliana unknown protein (AT3G59...
107
2e-19
22 gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thali...
105
9e-19
23 gb|AY112372.1| Zea mays CL6272_1 mRNA sequence
101
1e-17
24 gb|AC129715.48| Medicago truncatula clone mth2-36p23, complete s...
94
3e-15
25 emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, B...
66
8e-07
26 emb|CT832021.1| Oryza sativa (indica cultivar-group) cDNA clone:...
62
1e-05
27 ref|NM_001061629.1| Oryza sativa (japonica cultivar-group) Os05g...
62
1e-05
28 dbj|AK073229.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
1e-05
29 dbj|AK066158.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
1e-05
30 dbj|AK061533.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
1e-05
31 gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome...
58
2e-04
32 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
58
2e-04
33 gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, com...
50
0.046
34 gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, com...
50
0.046
35 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.046
36 dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic D...
50
0.046
37 dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic D...
50
0.046
38 ref|NM_001077618.1| Danio rerio zgc:152924 (zgc:152924), mRNA >g...
48
0.18
39 ref|XM_519714.2| PREDICTED: Pan troglodytes leucine zipper-EF-ha...
48
0.18
40 ref|XM_001171298.1| PREDICTED: Pan troglodytes leucine zipper-EF...
48
0.18
41 gb|AC073520.6| Homo sapiens BAC clone RP11-792H4 from 7, complet...
48
0.18
42 dbj|AB168539.1| Macaca fascicularis testis cDNA clone: QtsA-1286...
48
0.18
43 ref|XM_799670.1| Trypanosoma cruzi strain CL Brener DNA repair p...
48
0.18
44 ref|XM_801429.1| Trypanosoma cruzi strain CL Brener DNA repair p...
48
0.18
45 ref|XM_682597.1| PREDICTED: Danio rerio similar to Zinc finger, ...
48
0.18
46 ref|XM_681820.1| PREDICTED: Danio rerio similar to Zinc finger, ...
48
0.18
47 gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromo...
48
0.18
48 emb|BX088530.6| Zebrafish DNA sequence from clone DKEY-56F11 in ...
48
0.18
49 emb|BX248510.3| Zebrafish DNA sequence from clone DKEY-88P24 in ...
48
0.18
50 gb|AC146383.4| Pan troglodytes BAC clone RP43-125D18 from 7, com...
46
0.72
51 gb|AC146220.3| Pan troglodytes BAC clone RP43-27B14 from 7, comp...
46
0.72
52 gb|AC152829.2| Ornithorhynchus anatinus BAC clone OABb-466A1 fro...
46
0.72
53 gb|AC008266.3|AC008266 Homo sapiens PAC clone RP5-1145A24 from 7...
46
0.72
54 gb|AC006960.1|AC006960 Homo sapiens clone RP11-182J23 from 7p14-...
46
0.72
55 gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
44
2.8
56 gb|BC077601.1| Xenopus laevis UDP-Gal:betaGlcNAc beta 1,4- galac...
44
2.8
57 gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosom...
44
2.8
58 gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, comple...
44
2.8
59 emb|CR848708.12| Wallaby DNA sequence from clone MEKBa-201B9, co...
44
2.8
60 emb|AL513016.5| Human DNA sequence from clone RP11-474O21 on chr...
44
2.8
61 emb|AL357055.18| Human DNA sequence from clone RP11-389O22 on ch...
44
2.8
62 gb|AC122360.4| Mus musculus BAC clone RP23-428P21 from chromosom...
44
2.8
63 emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chr...
44
2.8
64 gb|AC114814.5| Homo sapiens BAC clone RP11-1345D17 from 2, compl...
44
2.8
65 gb|AC087623.21| Homo sapiens chromosome 8, clone RP11-350N15, co...
44
2.8
66 gb|AC102898.15| Mus musculus chromosome 7, clone RP24-321O23, co...
44
2.8
67 gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, comple...
44
2.8
68 emb|AL832241.1|HSM803548 Homo sapiens mRNA; cDNA DKFZp686I0477 (...
44
2.8
69 gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, compl...
44
2.8
70 gb|AY173945.1| Homo sapiens leucine zipper-EF-hand containing tr...
44
2.8
71 emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chro...
44
2.8
>ref|NM_001059737.1 | Oryza sativa (japonica cultivar-group) Os04g0496800 (Os04g0496800)
mRNA, complete cds
Length = 2791
Score = 904 bits (456), Expect = 0.0
Identities = 987/1164 (84%)
Strand = Plus / Plus
Query: 634 gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
|||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 641 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 700
Query: 694 aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
|||||||||| |||||| || | |||| |||||||||||||| || | || || |||
Sbjct: 701 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 760
Query: 754 gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcagagctgat 813
|||| ||||| |||||||| || ||||| || |||||||||||||||||||| |||||
Sbjct: 761 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcagggctgac 820
Query: 814 tgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcattactgg 873
|||||||||||| |||||||| |||| ||||| ||| |||| |||||||||||||| |||
Sbjct: 821 tgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcattattgg 880
Query: 874 ctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtgaaactt 933
| ||||| ||||| || ||||||||||||||||||||||| |||||| | |||||||||
Sbjct: 881 ttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtgaaactt 940
Query: 934 gctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaacagcagat 993
||||||||||||||||| |||||||||||||||| ||||| || || |||||||| |||
Sbjct: 941 gctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaacagctgat 1000
Query: 994 atcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattcctacta 1053
| || ||||| |||||| ||||||||||||| |||| || ||||||||||| |||||
Sbjct: 1001 ttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaatttttacta 1060
Query: 1054 ccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaagatgaaa 1113
||||| || || ||| |||| || || ||| ||||||| |||||||| |||||||||||
Sbjct: 1061 ccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaagatgaag 1120
Query: 1114 gaagaggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaa 1173
|||||||| || |||||||||||| |||||||||||||||| ||||||| ||| |||||
Sbjct: 1121 gaagaggaggcattgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaa 1180
Query: 1174 gatactgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacag 1233
||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||
Sbjct: 1181 gatactgcaaaagaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacag 1240
Query: 1234 acagctgaagatctggacgaatttttaaacaaggttaggaaaggtgaacgtgtatccaat 1293
||||||||||||||||| |||||||| ||||||||||||||||||| || ||| || |||
Sbjct: 1241 acagctgaagatctggatgaatttttgaacaaggttaggaaaggtggacatgtctcaaat 1300
Query: 1294 gatgaaatcttgagcttcgcgaagctttttaatgatgaattgaccttggataacatgagc 1353
|| ||||| |||||||| || ||||| |||||||||||| |||| ||||||||||||| |
Sbjct: 1301 gaagaaattttgagctttgcaaagctgtttaatgatgaactgactttggataacatgaac 1360
Query: 1354 agagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatcat 1413
|||||||| |||||||||||||| ||||||||||| || | ||||||||| || || ||
Sbjct: 1361 agagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagaccac 1420
Query: 1414 tacttgaggttcatgcttcgcaaaaaactacgcgacattaagaatgatgataaaatgatt 1473
||| ||| ||||||||||| || ||| | | || ||||||||||||||||| |||||
Sbjct: 1421 tacctgacattcatgcttcggaagaaattgcaagaaattaagaatgatgataagatgatc 1480
Query: 1474 caagctgagggtgttgattctctttctgaagaggagctccggcaagcttgccgtgatcgc 1533
|| |||||||| || || ||||||||||| |||||||| || ||||| || || || ||
Sbjct: 1481 caggctgagggcgtggagtctctttctgaggaggagcttcgacaagcatgtcgagaacgt 1540
Query: 1534 ggtcaccttggtctgcggtcaacagaagaaatgcgtaaacagctacgagactggctggac 1593
|| || |||||| || ||||||||| || |||| || ||||| |||||||| ||||
Sbjct: 1541 ggccatcttggtttgttgtcaacagaggagatgcaaaatcagctcagagactggttggat 1600
Query: 1594 ctgtcacttaatcatgctgtgccatcttctcttctcatactttcaagagcttttaccctg 1653
|||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||| ||
Sbjct: 1601 ttgtcacttaatcattctgtgccatcatctcttctaatactatcaagagcttttaccatg 1660
Query: 1654 gctgggagaatgaaacccgaggatgctgttgtagcaacgttgtcttctttgccagatgaa 1713
|||||| |||||| |||||||| |||||||||||||| || |||||| | |||||||||
Sbjct: 1661 tctgggaaaatgaagcccgaggaggctgttgtagcaacattatcttctcttccagatgaa 1720
Query: 1714 gttgtggatacaattgggacagtattgccatctgaagattcagtttctgagaggaggaga 1773
||||| ||||| |||||||||| | || || |||||||| || || || |||| | |
Sbjct: 1721 gttgtagatactgttgggacagttcttccttcagaagattctgtgtccgacaggaagcgg 1780
Query: 1774 aaactggaattccttgagatgcag 1797
||| |||||||||| || ||||||
Sbjct: 1781 aaattggaattcctggaaatgcag 1804
Score = 192 bits (97), Expect = 5e-45
Identities = 199/233 (85%)
Strand = Plus / Plus
Query: 2230 gatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcggaaat 2289
||||| ||||||||| |||||| || |||||||||||||| ||||||| ||| || ||
Sbjct: 2219 gatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaataggcaac 2278
Query: 2290 cgctggcaactgcttgatagggatcatgatggcaaagtgactcctgaggaagtagcggcg 2349
|||||||| ||||||||||| || | |||||||||||| || ||||| || ||||| ||
Sbjct: 2279 cgctggcagctgcttgatagtgaccgtgatggcaaagttacccctgacgaggtagcagct 2338
Query: 2350 gccgcagcttatctcaaggacaccatagggaaagaaggcgtccaagagcttatcagcaag 2409
|| ||| ||||||||| ||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 2339 gcagcaaattatctcaaagacactatagggaaggaaggcgtccaagagcttattagcaat 2398
Query: 2410 ctttctaaagacaaagaaggaaagatccgtgtggaggacatcgtgaagctggc 2462
||||||||||||||||| |||||||||| || || ||||| |||||||||||
Sbjct: 2399 ctttctaaagacaaagatggaaagatcctcgttgaagacattgtgaagctggc 2451
Score = 107 bits (54), Expect = 2e-19
Identities = 111/130 (85%)
Strand = Plus / Plus
Query: 1978 aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgcatcgtctgtt 2037
||||| ||||| ||| ||||||| ||||||||||| ||||| |||||||| || ||||||
Sbjct: 1967 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgcttcttctgtt 2026
Query: 2038 agcaaggagcgtcaagagttcctgagccttgtcaacaaggagataaaactatataactcc 2097
|||||| ||||||||||| |||| |||||||| || |||||| ||||||||||| ||
Sbjct: 2027 gccaaggaacgtcaagagtttctgaatcttgtcaataaagagatagaactatataacacc 2086
Query: 2098 atgcttgaaa 2107
||||| ||||
Sbjct: 2087 atgctggaaa 2096
Score = 81.8 bits (41), Expect = 1e-11
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1895 ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1878 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 1930
Score = 46.1 bits (23), Expect = 0.72
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 197 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
||||||||| ||||| || ||||| |||||||||||||| ||||||
Sbjct: 228 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 274
>dbj|AK068782.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013159H18, full
insert sequence
Length = 2792
Score = 904 bits (456), Expect = 0.0
Identities = 987/1164 (84%)
Strand = Plus / Plus
Query: 634 gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
|||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 642 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 701
Query: 694 aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
|||||||||| |||||| || | |||| |||||||||||||| || | || || |||
Sbjct: 702 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 761
Query: 754 gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcagagctgat 813
|||| ||||| |||||||| || ||||| || |||||||||||||||||||| |||||
Sbjct: 762 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcagggctgac 821
Query: 814 tgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcattactgg 873
|||||||||||| |||||||| |||| ||||| ||| |||| |||||||||||||| |||
Sbjct: 822 tgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcattattgg 881
Query: 874 ctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtgaaactt 933
| ||||| ||||| || ||||||||||||||||||||||| |||||| | |||||||||
Sbjct: 882 ttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtgaaactt 941
Query: 934 gctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaacagcagat 993
||||||||||||||||| |||||||||||||||| ||||| || || |||||||| |||
Sbjct: 942 gctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaacagctgat 1001
Query: 994 atcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattcctacta 1053
| || ||||| |||||| ||||||||||||| |||| || ||||||||||| |||||
Sbjct: 1002 ttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaatttttacta 1061
Query: 1054 ccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaagatgaaa 1113
||||| || || ||| |||| || || ||| ||||||| |||||||| |||||||||||
Sbjct: 1062 ccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaagatgaag 1121
Query: 1114 gaagaggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaa 1173
|||||||| || |||||||||||| |||||||||||||||| ||||||| ||| |||||
Sbjct: 1122 gaagaggaggcattgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaa 1181
Query: 1174 gatactgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacag 1233
||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||
Sbjct: 1182 gatactgcaaaagaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacag 1241
Query: 1234 acagctgaagatctggacgaatttttaaacaaggttaggaaaggtgaacgtgtatccaat 1293
||||||||||||||||| |||||||| ||||||||||||||||||| || ||| || |||
Sbjct: 1242 acagctgaagatctggatgaatttttgaacaaggttaggaaaggtggacatgtctcaaat 1301
Query: 1294 gatgaaatcttgagcttcgcgaagctttttaatgatgaattgaccttggataacatgagc 1353
|| ||||| |||||||| || ||||| |||||||||||| |||| ||||||||||||| |
Sbjct: 1302 gaagaaattttgagctttgcaaagctgtttaatgatgaactgactttggataacatgaac 1361
Query: 1354 agagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatcat 1413
|||||||| |||||||||||||| ||||||||||| || | ||||||||| || || ||
Sbjct: 1362 agagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagaccac 1421
Query: 1414 tacttgaggttcatgcttcgcaaaaaactacgcgacattaagaatgatgataaaatgatt 1473
||| ||| ||||||||||| || ||| | | || ||||||||||||||||| |||||
Sbjct: 1422 tacctgacattcatgcttcggaagaaattgcaagaaattaagaatgatgataagatgatc 1481
Query: 1474 caagctgagggtgttgattctctttctgaagaggagctccggcaagcttgccgtgatcgc 1533
|| |||||||| || || ||||||||||| |||||||| || ||||| || || || ||
Sbjct: 1482 caggctgagggcgtggagtctctttctgaggaggagcttcgacaagcatgtcgagaacgt 1541
Query: 1534 ggtcaccttggtctgcggtcaacagaagaaatgcgtaaacagctacgagactggctggac 1593
|| || |||||| || ||||||||| || |||| || ||||| |||||||| ||||
Sbjct: 1542 ggccatcttggtttgttgtcaacagaggagatgcaaaatcagctcagagactggttggat 1601
Query: 1594 ctgtcacttaatcatgctgtgccatcttctcttctcatactttcaagagcttttaccctg 1653
|||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||| ||
Sbjct: 1602 ttgtcacttaatcattctgtgccatcatctcttctaatactatcaagagcttttaccatg 1661
Query: 1654 gctgggagaatgaaacccgaggatgctgttgtagcaacgttgtcttctttgccagatgaa 1713
|||||| |||||| |||||||| |||||||||||||| || |||||| | |||||||||
Sbjct: 1662 tctgggaaaatgaagcccgaggaggctgttgtagcaacattatcttctcttccagatgaa 1721
Query: 1714 gttgtggatacaattgggacagtattgccatctgaagattcagtttctgagaggaggaga 1773
||||| ||||| |||||||||| | || || |||||||| || || || |||| | |
Sbjct: 1722 gttgtagatactgttgggacagttcttccttcagaagattctgtgtccgacaggaagcgg 1781
Query: 1774 aaactggaattccttgagatgcag 1797
||| |||||||||| || ||||||
Sbjct: 1782 aaattggaattcctggaaatgcag 1805
Score = 184 bits (93), Expect = 1e-42
Identities = 198/233 (84%)
Strand = Plus / Plus
Query: 2230 gatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcggaaat 2289
||||| ||||||||| |||||| || ||||| |||||||| ||||||| ||| || ||
Sbjct: 2220 gatgcaatgcttcagaaattagagaaagagatagatgatgttgatgcacgaataggcaac 2279
Query: 2290 cgctggcaactgcttgatagggatcatgatggcaaagtgactcctgaggaagtagcggcg 2349
|||||||| ||||||||||| || | |||||||||||| || ||||| || ||||| ||
Sbjct: 2280 cgctggcagctgcttgatagtgaccgtgatggcaaagttacccctgacgaggtagcagct 2339
Query: 2350 gccgcagcttatctcaaggacaccatagggaaagaaggcgtccaagagcttatcagcaag 2409
|| ||| ||||||||| ||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 2340 gcagcaaattatctcaaagacactatagggaaggaaggcgtccaagagcttattagcaat 2399
Query: 2410 ctttctaaagacaaagaaggaaagatccgtgtggaggacatcgtgaagctggc 2462
||||||||||||||||| |||||||||| || || ||||| |||||||||||
Sbjct: 2400 ctttctaaagacaaagatggaaagatcctcgttgaagacattgtgaagctggc 2452
Score = 107 bits (54), Expect = 2e-19
Identities = 111/130 (85%)
Strand = Plus / Plus
Query: 1978 aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgcatcgtctgtt 2037
||||| ||||| ||| ||||||| ||||||||||| ||||| |||||||| || ||||||
Sbjct: 1968 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgcttcttctgtt 2027
Query: 2038 agcaaggagcgtcaagagttcctgagccttgtcaacaaggagataaaactatataactcc 2097
|||||| ||||||||||| |||| |||||||| || |||||| ||||||||||| ||
Sbjct: 2028 gccaaggaacgtcaagagtttctgaatcttgtcaataaagagatagaactatataacacc 2087
Query: 2098 atgcttgaaa 2107
||||| ||||
Sbjct: 2088 atgctggaaa 2097
Score = 81.8 bits (41), Expect = 1e-11
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1895 ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1879 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 1931
Score = 46.1 bits (23), Expect = 0.72
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 197 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
||||||||| ||||| || ||||| |||||||||||||| ||||||
Sbjct: 229 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 275
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
Length = 35954743
Score = 383 bits (193), Expect = e-102
Identities = 286/317 (90%)
Strand = Plus / Minus
Query: 804 cagagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgca 863
||||||||||||||||||||| |||||||| |||| ||||||||| | || || |||||
Sbjct: 23892476 cagagctgattgggctgcaaagctgaagcactggaaggatgaatttgtgtcaacgctgca 23892417
Query: 864 gcattactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgct 923
|||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 23892416 gcattactggttagggacaaagctactctgggcagatgtgaggatttcgtcaagattact 23892357
Query: 924 ggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtac 983
||||||||||||||||||||||| ||| |||||||||||||| || || || ||||||||
Sbjct: 23892356 ggtgaaacttgctggtggaaagaacctttcaagaagagagagacaacaactgacccgtac 23892297
Query: 984 aacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatgga 1043
|||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 23892296 aacagcagatatcttcaggctggtaccttttgctgtgttcatcattgttccattcatgga 23892237
Query: 1044 attcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaaga 1103
||| |||| |||||||| || ||||| |||||||||||||| || ||||||||||||||
Sbjct: 23892236 gttcttacttccagtgttcctcaagttatttccaaatatgcttccctcaactttccaaga 23892177
Query: 1104 caagatgaaagaagagg 1120
|||||||||||||||||
Sbjct: 23892176 caagatgaaagaagagg 23892160
Score = 278 bits (140), Expect = 1e-70
Identities = 312/371 (84%), Gaps = 3/371 (0%)
Strand = Plus / Minus
Query: 439 gggcttctgcgacgtccagctcacgtgatttctcactatggttatggaattggaaggaat 498
||||||||||| || ||||| || | |||||||| || ||||||||||||||||||
Sbjct: 23892950 gggcttctgcggcgcccagcccatgggatttctctacctgcttatggaattggaaggaag 23892891
Query: 499 gaatttacattgcctttgggagctagaggtttgttgcagtcagttcgcaaagcatcaact 558
|||||| |||||| |||| |||||| |||| |||||||||| |||| ||| ||||||
Sbjct: 23892890 gaatttgggttgcctatgggtgctagacatttgctgcagtcagtccgcacagcctcaact 23892831
Query: 559 gcaactgctgggcaacctaaattggatattgaaga---acagggtgataatcaaaaccag 615
||||| |||||||||||||| |||||||||||||| |||| |||| |||| || |||
Sbjct: 23892830 gcaacagctgggcaacctaagttggatattgaagatgaacagagtgaggatcagaaacag 23892771
Query: 616 aataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtggaagggctaagc 675
|| ||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23892770 aacaaaaggaaaaaggaggcatccccagaagaatgtgatcaggctgtggaaggcctaagc 23892711
Query: 676 acggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaaggctgaccagtca 735
| ||||||||||||||||||||||||||||| ||||| || ||||||||| ||| |||
Sbjct: 23892710 agtgcaaaagctaaagccaaagctaagcaggtacaagaatctgtaaaggctggccaatca 23892651
Query: 736 atcgtaaagaagttctgggcaaggcttctgggtattggtccggctcttcgagctgttgct 795
|| ||| || |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 23892650 attgtacgaaaattctgggcgaggcttctgggtattggtcctgctctccgagctgttgct 23892591
Query: 796 tcaatgagcag 806
|| ||||||||
Sbjct: 23892590 tcgatgagcag 23892580
Score = 220 bits (111), Expect = 2e-53
Identities = 141/151 (93%)
Strand = Plus / Minus
Query: 1118 aggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagata 1177
||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||
Sbjct: 23891870 aggaagcgttgaaaaggaaactgaaagcaagaatggagtatgccaagtttttgcaagata 23891811
Query: 1178 ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacag 1237
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 23891810 ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaataaaacaaacag 23891751
Query: 1238 ctgaagatctggacgaatttttaaacaaggt 1268
| |||||||| || |||||||| ||||||||
Sbjct: 23891750 ccgaagatcttgatgaatttttgaacaaggt 23891720
Score = 204 bits (103), Expect = 1e-48
Identities = 145/159 (91%)
Strand = Plus / Minus
Query: 1639 agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
|||||||||||| | |||||| |||||| || ||||| |||||||||||||| || |||
Sbjct: 23889543 agagcttttaccgtatctgggaaaatgaagcctgaggaggctgttgtagcaaccttatct 23889484
Query: 1699 tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 23889483 tctctaccagatgaagttgtggatacagttgggaccgtattgccatctgaagattcggtt 23889424
Query: 1759 tctgagaggaggagaaaactggaattccttgagatgcag 1797
|||||||||||||||||||||||||||||||||||||||
Sbjct: 23889423 tctgagaggaggagaaaactggaattccttgagatgcag 23889385
Score = 149 bits (75), Expect = 7e-32
Identities = 126/143 (88%)
Strand = Plus / Minus
Query: 1889 aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaag 1948
||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 23888308 aggctgctgaagaagatttggctttgaaggaaatgactggtcctactgctagggaagaag 23888249
Query: 1949 aagaactgactgacgcaaaacgacatgacaaggaacagctctgtaatatcagtcaagcat 2008
||||||||| || ||||||| || || |||||| ||||||||||| | |||| ||||
Sbjct: 23888248 aagaactgagagaagcaaaacagcacgataaggaaaagctctgtaattttagtcgagcac 23888189
Query: 2009 tggctgtgctggcatctgcatcg 2031
||||||| |||||||| ||||||
Sbjct: 23888188 tggctgtactggcatccgcatcg 23888166
Score = 135 bits (68), Expect = 1e-27
Identities = 107/120 (89%)
Strand = Plus / Minus
Query: 1449 cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagagga 1508
|||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 23890512 cattaagaatgacgataagatgattcaagctgagggtgttgagtctctctctgaagagga 23890453
Query: 1509 gctccggcaagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcg 1568
|| |||||||| || ||||| || |||||||| ||| ||| ||||||||||||||||||
Sbjct: 23890452 acttcggcaagcctgtcgtgaacgtggtcacctaggtttgctgtcaacagaagaaatgcg 23890393
Score = 125 bits (63), Expect = 1e-24
Identities = 84/91 (92%)
Strand = Plus / Minus
Query: 1352 gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
||||| ||||||||||||| ||||||||||||||||||||||||||||| || || || |
Sbjct: 23891454 gcagaccacgcttggtaaacatgtgcaaatatatgggtattcgacctttcggtactgacc 23891395
Query: 1412 attacttgaggttcatgcttcgcaaaaaact 1442
| |||||||||||||||||||||||||||||
Sbjct: 23891394 actacttgaggttcatgcttcgcaaaaaact 23891364
Score = 123 bits (62), Expect = 4e-24
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 2308 agggatcatgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaag 2367
||||||| ||||||||| |||||||||||||| |||||| | || ||||||||||| |||
Sbjct: 23886573 agggatcttgatggcaaggtgactcctgaggaggtagcgtcagcagcagcttatctgaag 23886514
Query: 2368 gacaccatagggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
|| || ||||| || |||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 23886513 gatacaataggaaaggaaggcgtccaagagcttgtcagcaacctctctaaagacaaag 23886456
Score = 109 bits (55), Expect = 6e-20
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 1265 aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
||||||||| |||||||| ||| || |||||||||||||||| |||||||||||| ||||
Sbjct: 23891631 aggttaggagaggtgaacatgtctcaaatgatgaaatcttgaacttcgcgaagctgttta 23891572
Query: 1325 atgatgaattgaccttggataacatgagcag 1355
||||||| |||| |||||||||||||||||
Sbjct: 23891571 atgatgagctgactttggataacatgagcag 23891541
Score = 91.7 bits (46), Expect = 1e-14
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 2225 aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
|||| ||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |
Sbjct: 23887129 aggttgatgctatgctccagaaattagaaaaggagattgatgacgtggatgcacaaattg 23887070
Query: 2285 gaaatcgctggcaactgcttgatagg 2310
|||| || |||||| | |||||||||
Sbjct: 23887069 gaaaccgatggcaaattcttgatagg 23887044
Score = 87.7 bits (44), Expect = 2e-13
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1573 cagctacgagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcata 1632
||||| ||||| ||| |||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 23889703 cagctccgagattggttggatctctcacttaatcatgctgtgccatcctctcttctcata 23889644
Query: 1633 ctttcaag 1640
||||||||
Sbjct: 23889643 ctttcaag 23889636
Score = 83.8 bits (42), Expect = 3e-12
Identities = 99/118 (83%)
Strand = Plus / Minus
Query: 158 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 217
||||| |||||||||||||| | ||||| |||||| | ||||| || ||||| ||||
Sbjct: 23893228 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 23893169
Query: 218 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 275
|||| |||| || ||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 23893168 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 23893111
Score = 81.8 bits (41), Expect = 1e-11
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 23887994 gtctgttagcaaggagcgtcaagagttcctcagccttgtcaacaa 23887950
Score = 50.1 bits (25), Expect = 0.046
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 2431 aagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
|||||||||||||| ||||| ||||||||||| || ||| | || ||||||||
Sbjct: 23886352 aagatccgtgtggaagacattgtgaagctggcatcacaaacagatgaaaacaa 23886300
Score = 50.1 bits (25), Expect = 0.046
Identities = 115/145 (79%)
Strand = Plus / Minus
Query: 2084 aactatataactccatgcttgaaagagaagacacagagggggcagaagaagctaagaagg 2143
|||| |||||||| |||||||||| || | ||||| || | ||| ||||||||||| |
Sbjct: 23887825 aactgtataactctatgcttgaaaaggagggtacagaaggtgaagaggaagctaagaaag 23887766
Query: 2144 catatatggctgttagaggggagtcagacgacaccacagaggttgcttcagaggaaaagg 2203
| || ||||||| ||||| ||||| ||| | | | ||||||| | ||| |||||||
Sbjct: 23887765 cttacatggctgctagagaagagtcggacaaggctgctgaggttgatgaagaagaaaagg 23887706
Query: 2204 tctcgtcggcgctgattgacaaggt 2228
|||| |||||||||||||| |||||
Sbjct: 23887705 tctcatcggcgctgattgagaaggt 23887681
>dbj|AP006438.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0030C08
Length = 163423
Score = 383 bits (193), Expect = e-102
Identities = 286/317 (90%)
Strand = Plus / Minus
Query: 804 cagagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgca 863
||||||||||||||||||||| |||||||| |||| ||||||||| | || || |||||
Sbjct: 114142 cagagctgattgggctgcaaagctgaagcactggaaggatgaatttgtgtcaacgctgca 114083
Query: 864 gcattactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgct 923
|||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 114082 gcattactggttagggacaaagctactctgggcagatgtgaggatttcgtcaagattact 114023
Query: 924 ggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtac 983
||||||||||||||||||||||| ||| |||||||||||||| || || || ||||||||
Sbjct: 114022 ggtgaaacttgctggtggaaagaacctttcaagaagagagagacaacaactgacccgtac 113963
Query: 984 aacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatgga 1043
|||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 113962 aacagcagatatcttcaggctggtaccttttgctgtgttcatcattgttccattcatgga 113903
Query: 1044 attcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaaga 1103
||| |||| |||||||| || ||||| |||||||||||||| || ||||||||||||||
Sbjct: 113902 gttcttacttccagtgttcctcaagttatttccaaatatgcttccctcaactttccaaga 113843
Query: 1104 caagatgaaagaagagg 1120
|||||||||||||||||
Sbjct: 113842 caagatgaaagaagagg 113826
Score = 278 bits (140), Expect = 1e-70
Identities = 312/371 (84%), Gaps = 3/371 (0%)
Strand = Plus / Minus
Query: 439 gggcttctgcgacgtccagctcacgtgatttctcactatggttatggaattggaaggaat 498
||||||||||| || ||||| || | |||||||| || ||||||||||||||||||
Sbjct: 114616 gggcttctgcggcgcccagcccatgggatttctctacctgcttatggaattggaaggaag 114557
Query: 499 gaatttacattgcctttgggagctagaggtttgttgcagtcagttcgcaaagcatcaact 558
|||||| |||||| |||| |||||| |||| |||||||||| |||| ||| ||||||
Sbjct: 114556 gaatttgggttgcctatgggtgctagacatttgctgcagtcagtccgcacagcctcaact 114497
Query: 559 gcaactgctgggcaacctaaattggatattgaaga---acagggtgataatcaaaaccag 615
||||| |||||||||||||| |||||||||||||| |||| |||| |||| || |||
Sbjct: 114496 gcaacagctgggcaacctaagttggatattgaagatgaacagagtgaggatcagaaacag 114437
Query: 616 aataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtggaagggctaagc 675
|| ||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 114436 aacaaaaggaaaaaggaggcatccccagaagaatgtgatcaggctgtggaaggcctaagc 114377
Query: 676 acggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaaggctgaccagtca 735
| ||||||||||||||||||||||||||||| ||||| || ||||||||| ||| |||
Sbjct: 114376 agtgcaaaagctaaagccaaagctaagcaggtacaagaatctgtaaaggctggccaatca 114317
Query: 736 atcgtaaagaagttctgggcaaggcttctgggtattggtccggctcttcgagctgttgct 795
|| ||| || |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 114316 attgtacgaaaattctgggcgaggcttctgggtattggtcctgctctccgagctgttgct 114257
Query: 796 tcaatgagcag 806
|| ||||||||
Sbjct: 114256 tcgatgagcag 114246
Score = 220 bits (111), Expect = 2e-53
Identities = 141/151 (93%)
Strand = Plus / Minus
Query: 1118 aggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagata 1177
||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||
Sbjct: 113536 aggaagcgttgaaaaggaaactgaaagcaagaatggagtatgccaagtttttgcaagata 113477
Query: 1178 ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacag 1237
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 113476 ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaataaaacaaacag 113417
Query: 1238 ctgaagatctggacgaatttttaaacaaggt 1268
| |||||||| || |||||||| ||||||||
Sbjct: 113416 ccgaagatcttgatgaatttttgaacaaggt 113386
Score = 204 bits (103), Expect = 1e-48
Identities = 145/159 (91%)
Strand = Plus / Minus
Query: 1639 agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
|||||||||||| | |||||| |||||| || ||||| |||||||||||||| || |||
Sbjct: 111209 agagcttttaccgtatctgggaaaatgaagcctgaggaggctgttgtagcaaccttatct 111150
Query: 1699 tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 111149 tctctaccagatgaagttgtggatacagttgggaccgtattgccatctgaagattcggtt 111090
Query: 1759 tctgagaggaggagaaaactggaattccttgagatgcag 1797
|||||||||||||||||||||||||||||||||||||||
Sbjct: 111089 tctgagaggaggagaaaactggaattccttgagatgcag 111051
Score = 149 bits (75), Expect = 7e-32
Identities = 126/143 (88%)
Strand = Plus / Minus
Query: 1889 aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaag 1948
||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 109974 aggctgctgaagaagatttggctttgaaggaaatgactggtcctactgctagggaagaag 109915
Query: 1949 aagaactgactgacgcaaaacgacatgacaaggaacagctctgtaatatcagtcaagcat 2008
||||||||| || ||||||| || || |||||| ||||||||||| | |||| ||||
Sbjct: 109914 aagaactgagagaagcaaaacagcacgataaggaaaagctctgtaattttagtcgagcac 109855
Query: 2009 tggctgtgctggcatctgcatcg 2031
||||||| |||||||| ||||||
Sbjct: 109854 tggctgtactggcatccgcatcg 109832
Score = 135 bits (68), Expect = 1e-27
Identities = 107/120 (89%)
Strand = Plus / Minus
Query: 1449 cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagagga 1508
|||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 112178 cattaagaatgacgataagatgattcaagctgagggtgttgagtctctctctgaagagga 112119
Query: 1509 gctccggcaagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcg 1568
|| |||||||| || ||||| || |||||||| ||| ||| ||||||||||||||||||
Sbjct: 112118 acttcggcaagcctgtcgtgaacgtggtcacctaggtttgctgtcaacagaagaaatgcg 112059
Score = 125 bits (63), Expect = 1e-24
Identities = 84/91 (92%)
Strand = Plus / Minus
Query: 1352 gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
||||| ||||||||||||| ||||||||||||||||||||||||||||| || || || |
Sbjct: 113120 gcagaccacgcttggtaaacatgtgcaaatatatgggtattcgacctttcggtactgacc 113061
Query: 1412 attacttgaggttcatgcttcgcaaaaaact 1442
| |||||||||||||||||||||||||||||
Sbjct: 113060 actacttgaggttcatgcttcgcaaaaaact 113030
Score = 123 bits (62), Expect = 4e-24
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 2308 agggatcatgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaag 2367
||||||| ||||||||| |||||||||||||| |||||| | || ||||||||||| |||
Sbjct: 108239 agggatcttgatggcaaggtgactcctgaggaggtagcgtcagcagcagcttatctgaag 108180
Query: 2368 gacaccatagggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
|| || ||||| || |||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 108179 gatacaataggaaaggaaggcgtccaagagcttgtcagcaacctctctaaagacaaag 108122
Score = 109 bits (55), Expect = 6e-20
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 1265 aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
||||||||| |||||||| ||| || |||||||||||||||| |||||||||||| ||||
Sbjct: 113297 aggttaggagaggtgaacatgtctcaaatgatgaaatcttgaacttcgcgaagctgttta 113238
Query: 1325 atgatgaattgaccttggataacatgagcag 1355
||||||| |||| |||||||||||||||||
Sbjct: 113237 atgatgagctgactttggataacatgagcag 113207
Score = 91.7 bits (46), Expect = 1e-14
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 2225 aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
|||| ||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |
Sbjct: 108795 aggttgatgctatgctccagaaattagaaaaggagattgatgacgtggatgcacaaattg 108736
Query: 2285 gaaatcgctggcaactgcttgatagg 2310
|||| || |||||| | |||||||||
Sbjct: 108735 gaaaccgatggcaaattcttgatagg 108710
Score = 87.7 bits (44), Expect = 2e-13
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1573 cagctacgagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcata 1632
||||| ||||| ||| |||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 111369 cagctccgagattggttggatctctcacttaatcatgctgtgccatcctctcttctcata 111310
Query: 1633 ctttcaag 1640
||||||||
Sbjct: 111309 ctttcaag 111302
Score = 83.8 bits (42), Expect = 3e-12
Identities = 99/118 (83%)
Strand = Plus / Minus
Query: 158 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 217
||||| |||||||||||||| | ||||| |||||| | ||||| || ||||| ||||
Sbjct: 114894 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 114835
Query: 218 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 275
|||| |||| || ||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 114834 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 114777
Score = 81.8 bits (41), Expect = 1e-11
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 109660 gtctgttagcaaggagcgtcaagagttcctcagccttgtcaacaa 109616
Score = 50.1 bits (25), Expect = 0.046
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 2431 aagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
|||||||||||||| ||||| ||||||||||| || ||| | || ||||||||
Sbjct: 108018 aagatccgtgtggaagacattgtgaagctggcatcacaaacagatgaaaacaa 107966
Score = 50.1 bits (25), Expect = 0.046
Identities = 115/145 (79%)
Strand = Plus / Minus
Query: 2084 aactatataactccatgcttgaaagagaagacacagagggggcagaagaagctaagaagg 2143
|||| |||||||| |||||||||| || | ||||| || | ||| ||||||||||| |
Sbjct: 109491 aactgtataactctatgcttgaaaaggagggtacagaaggtgaagaggaagctaagaaag 109432
Query: 2144 catatatggctgttagaggggagtcagacgacaccacagaggttgcttcagaggaaaagg 2203
| || ||||||| ||||| ||||| ||| | | | ||||||| | ||| |||||||
Sbjct: 109431 cttacatggctgctagagaagagtcggacaaggctgctgaggttgatgaagaagaaaagg 109372
Query: 2204 tctcgtcggcgctgattgacaaggt 2228
|||| |||||||||||||| |||||
Sbjct: 109371 tctcatcggcgctgattgagaaggt 109347
>dbj|AP004881.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0496E03
Length = 138622
Score = 383 bits (193), Expect = e-102
Identities = 286/317 (90%)
Strand = Plus / Minus
Query: 804 cagagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgca 863
||||||||||||||||||||| |||||||| |||| ||||||||| | || || |||||
Sbjct: 26440 cagagctgattgggctgcaaagctgaagcactggaaggatgaatttgtgtcaacgctgca 26381
Query: 864 gcattactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgct 923
|||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 26380 gcattactggttagggacaaagctactctgggcagatgtgaggatttcgtcaagattact 26321
Query: 924 ggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtac 983
||||||||||||||||||||||| ||| |||||||||||||| || || || ||||||||
Sbjct: 26320 ggtgaaacttgctggtggaaagaacctttcaagaagagagagacaacaactgacccgtac 26261
Query: 984 aacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatgga 1043
|||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 26260 aacagcagatatcttcaggctggtaccttttgctgtgttcatcattgttccattcatgga 26201
Query: 1044 attcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaaga 1103
||| |||| |||||||| || ||||| |||||||||||||| || ||||||||||||||
Sbjct: 26200 gttcttacttccagtgttcctcaagttatttccaaatatgcttccctcaactttccaaga 26141
Query: 1104 caagatgaaagaagagg 1120
|||||||||||||||||
Sbjct: 26140 caagatgaaagaagagg 26124
Score = 278 bits (140), Expect = 1e-70
Identities = 312/371 (84%), Gaps = 3/371 (0%)
Strand = Plus / Minus
Query: 439 gggcttctgcgacgtccagctcacgtgatttctcactatggttatggaattggaaggaat 498
||||||||||| || ||||| || | |||||||| || ||||||||||||||||||
Sbjct: 26914 gggcttctgcggcgcccagcccatgggatttctctacctgcttatggaattggaaggaag 26855
Query: 499 gaatttacattgcctttgggagctagaggtttgttgcagtcagttcgcaaagcatcaact 558
|||||| |||||| |||| |||||| |||| |||||||||| |||| ||| ||||||
Sbjct: 26854 gaatttgggttgcctatgggtgctagacatttgctgcagtcagtccgcacagcctcaact 26795
Query: 559 gcaactgctgggcaacctaaattggatattgaaga---acagggtgataatcaaaaccag 615
||||| |||||||||||||| |||||||||||||| |||| |||| |||| || |||
Sbjct: 26794 gcaacagctgggcaacctaagttggatattgaagatgaacagagtgaggatcagaaacag 26735
Query: 616 aataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtggaagggctaagc 675
|| ||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 26734 aacaaaaggaaaaaggaggcatccccagaagaatgtgatcaggctgtggaaggcctaagc 26675
Query: 676 acggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaaggctgaccagtca 735
| ||||||||||||||||||||||||||||| ||||| || ||||||||| ||| |||
Sbjct: 26674 agtgcaaaagctaaagccaaagctaagcaggtacaagaatctgtaaaggctggccaatca 26615
Query: 736 atcgtaaagaagttctgggcaaggcttctgggtattggtccggctcttcgagctgttgct 795
|| ||| || |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 26614 attgtacgaaaattctgggcgaggcttctgggtattggtcctgctctccgagctgttgct 26555
Query: 796 tcaatgagcag 806
|| ||||||||
Sbjct: 26554 tcgatgagcag 26544
Score = 220 bits (111), Expect = 2e-53
Identities = 141/151 (93%)
Strand = Plus / Minus
Query: 1118 aggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagata 1177
||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||
Sbjct: 25834 aggaagcgttgaaaaggaaactgaaagcaagaatggagtatgccaagtttttgcaagata 25775
Query: 1178 ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacag 1237
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 25774 ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaataaaacaaacag 25715
Query: 1238 ctgaagatctggacgaatttttaaacaaggt 1268
| |||||||| || |||||||| ||||||||
Sbjct: 25714 ccgaagatcttgatgaatttttgaacaaggt 25684
Score = 204 bits (103), Expect = 1e-48
Identities = 145/159 (91%)
Strand = Plus / Minus
Query: 1639 agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
|||||||||||| | |||||| |||||| || ||||| |||||||||||||| || |||
Sbjct: 23507 agagcttttaccgtatctgggaaaatgaagcctgaggaggctgttgtagcaaccttatct 23448
Query: 1699 tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 23447 tctctaccagatgaagttgtggatacagttgggaccgtattgccatctgaagattcggtt 23388
Query: 1759 tctgagaggaggagaaaactggaattccttgagatgcag 1797
|||||||||||||||||||||||||||||||||||||||
Sbjct: 23387 tctgagaggaggagaaaactggaattccttgagatgcag 23349
Score = 149 bits (75), Expect = 7e-32
Identities = 126/143 (88%)
Strand = Plus / Minus
Query: 1889 aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaag 1948
||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 22272 aggctgctgaagaagatttggctttgaaggaaatgactggtcctactgctagggaagaag 22213
Query: 1949 aagaactgactgacgcaaaacgacatgacaaggaacagctctgtaatatcagtcaagcat 2008
||||||||| || ||||||| || || |||||| ||||||||||| | |||| ||||
Sbjct: 22212 aagaactgagagaagcaaaacagcacgataaggaaaagctctgtaattttagtcgagcac 22153
Query: 2009 tggctgtgctggcatctgcatcg 2031
||||||| |||||||| ||||||
Sbjct: 22152 tggctgtactggcatccgcatcg 22130
Score = 135 bits (68), Expect = 1e-27
Identities = 107/120 (89%)
Strand = Plus / Minus
Query: 1449 cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagagga 1508
|||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 24476 cattaagaatgacgataagatgattcaagctgagggtgttgagtctctctctgaagagga 24417
Query: 1509 gctccggcaagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcg 1568
|| |||||||| || ||||| || |||||||| ||| ||| ||||||||||||||||||
Sbjct: 24416 acttcggcaagcctgtcgtgaacgtggtcacctaggtttgctgtcaacagaagaaatgcg 24357
Score = 125 bits (63), Expect = 1e-24
Identities = 84/91 (92%)
Strand = Plus / Minus
Query: 1352 gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
||||| ||||||||||||| ||||||||||||||||||||||||||||| || || || |
Sbjct: 25418 gcagaccacgcttggtaaacatgtgcaaatatatgggtattcgacctttcggtactgacc 25359
Query: 1412 attacttgaggttcatgcttcgcaaaaaact 1442
| |||||||||||||||||||||||||||||
Sbjct: 25358 actacttgaggttcatgcttcgcaaaaaact 25328
Score = 123 bits (62), Expect = 4e-24
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 2308 agggatcatgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaag 2367
||||||| ||||||||| |||||||||||||| |||||| | || ||||||||||| |||
Sbjct: 20537 agggatcttgatggcaaggtgactcctgaggaggtagcgtcagcagcagcttatctgaag 20478
Query: 2368 gacaccatagggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
|| || ||||| || |||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 20477 gatacaataggaaaggaaggcgtccaagagcttgtcagcaacctctctaaagacaaag 20420
Score = 109 bits (55), Expect = 6e-20
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 1265 aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
||||||||| |||||||| ||| || |||||||||||||||| |||||||||||| ||||
Sbjct: 25595 aggttaggagaggtgaacatgtctcaaatgatgaaatcttgaacttcgcgaagctgttta 25536
Query: 1325 atgatgaattgaccttggataacatgagcag 1355
||||||| |||| |||||||||||||||||
Sbjct: 25535 atgatgagctgactttggataacatgagcag 25505
Score = 91.7 bits (46), Expect = 1e-14
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 2225 aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
|||| ||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |
Sbjct: 21093 aggttgatgctatgctccagaaattagaaaaggagattgatgacgtggatgcacaaattg 21034
Query: 2285 gaaatcgctggcaactgcttgatagg 2310
|||| || |||||| | |||||||||
Sbjct: 21033 gaaaccgatggcaaattcttgatagg 21008
Score = 87.7 bits (44), Expect = 2e-13
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1573 cagctacgagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcata 1632
||||| ||||| ||| |||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 23667 cagctccgagattggttggatctctcacttaatcatgctgtgccatcctctcttctcata 23608
Query: 1633 ctttcaag 1640
||||||||
Sbjct: 23607 ctttcaag 23600
Score = 83.8 bits (42), Expect = 3e-12
Identities = 99/118 (83%)
Strand = Plus / Minus
Query: 158 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 217
||||| |||||||||||||| | ||||| |||||| | ||||| || ||||| ||||
Sbjct: 27192 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 27133
Query: 218 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 275
|||| |||| || ||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 27132 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 27075
Score = 81.8 bits (41), Expect = 1e-11
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 21958 gtctgttagcaaggagcgtcaagagttcctcagccttgtcaacaa 21914
Score = 50.1 bits (25), Expect = 0.046
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 2431 aagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
|||||||||||||| ||||| ||||||||||| || ||| | || ||||||||
Sbjct: 20316 aagatccgtgtggaagacattgtgaagctggcatcacaaacagatgaaaacaa 20264
Score = 50.1 bits (25), Expect = 0.046
Identities = 115/145 (79%)
Strand = Plus / Minus
Query: 2084 aactatataactccatgcttgaaagagaagacacagagggggcagaagaagctaagaagg 2143
|||| |||||||| |||||||||| || | ||||| || | ||| ||||||||||| |
Sbjct: 21789 aactgtataactctatgcttgaaaaggagggtacagaaggtgaagaggaagctaagaaag 21730
Query: 2144 catatatggctgttagaggggagtcagacgacaccacagaggttgcttcagaggaaaagg 2203
| || ||||||| ||||| ||||| ||| | | | ||||||| | ||| |||||||
Sbjct: 21729 cttacatggctgctagagaagagtcggacaaggctgctgaggttgatgaagaagaaaagg 21670
Query: 2204 tctcgtcggcgctgattgacaaggt 2228
|||| |||||||||||||| |||||
Sbjct: 21669 tctcatcggcgctgattgagaaggt 21645
>gb|AY664418.1 | Zea mays cultivar Mo17 locus 9008, complete sequence
Length = 282600
Score = 270 bits (136), Expect = 3e-68
Identities = 271/316 (85%)
Strand = Plus / Plus
Query: 805 agagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcag 864
|||||||||||||||||||| |||||||| |||| |||||||||||||| |||||||||
Sbjct: 25501 agagctgattgggctgcaaagttgaagcattggaaggatgaatttatttctacactgcag 25560
Query: 865 cattactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctg 924
||||| ||| | || || ||||||||||||||||||||||| || |||||||| || |
Sbjct: 25561 cattattggttgggcactaagctactctgggcagatgttagaatctcatcaaggctgtta 25620
Query: 925 gtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtaca 984
|| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| || |||
Sbjct: 25621 gttaaacttgctagtggaaagagcctcacaagacgagagaggcagcagctcacacgcaca 25680
Query: 985 acagcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaa 1044
||||||||| | |||||||| |||||| |||| || || ||| | || |||||||||||
Sbjct: 25681 acagcagatctattcaggctagtaccttttgcagtttttattatcgttccattcatggag 25740
Query: 1045 ttcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagac 1104
|| | || |||||||| || |||||||| ||||| ||| ||||||| |||||||| |||
Sbjct: 25741 ctcttgctgccagtgttcctcaagttgttcccaaacatgttgccatccactttccaggac 25800
Query: 1105 aagatgaaagaagagg 1120
|| |||||||||||||
Sbjct: 25801 aaaatgaaagaagagg 25816
Score = 170 bits (86), Expect = 2e-38
Identities = 113/122 (92%)
Strand = Plus / Plus
Query: 1129 aaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaagaa 1188
|||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||
Sbjct: 25912 aaaaggaaactgaaagcaaggatggaatatgcaaagtttttacaagacactgctaaagaa 25971
Query: 1189 atggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagatctg 1248
||||| |||||||||||||||||||| |||||||||| |||||||| ||||||||||||
Sbjct: 25972 atggcgaaggaagttcaaacatcacgcagtggagaaatgaaacagactgctgaagatctg 26031
Query: 1249 ga 1250
||
Sbjct: 26032 ga 26033
Score = 127 bits (64), Expect = 2e-25
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 1662 aatgaaacccgaggatgctgttgtagcaacgttgtcttctttgccagatgaagttgtgga 1721
||||||||| ||||| || ||||||||||| || ||||| |||||||||||||||| ||
Sbjct: 42815 aatgaaacctgaggaggccgttgtagcaaccttatcttccctgccagatgaagttgtcga 42874
Query: 1722 tacaattgggacagtattgccatctgaagattcagtttctgagaggaggagaaaactgga 1781
|||| ||||||| ||| |||| ||||||||||| ||||| ||||||| ||||||| ||||
Sbjct: 42875 tacagttgggactgtactgccttctgaagattctgtttcagagaggaagagaaaattgga 42934
Query: 1782 attccttgagatgcag 1797
||| || |||||||||
Sbjct: 42935 atttctggagatgcag 42950
Score = 109 bits (55), Expect = 6e-20
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 1449 cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagagga 1508
|||||||||||||||||| |||||||||||||||||||| || |||||||||||| | ||
Sbjct: 26925 cattaagaatgatgataagatgattcaagctgagggtgtggagtctctttctgaatatga 26984
Query: 1509 gctccggcaagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcg 1568
||| || ||||| || ||||| || || ||||||||| || ||||||||| || |||||
Sbjct: 26985 gcttcgacaagcatgtcgtgagcgtgggcaccttggtttgttgtcaacagaggagatgcg 27044
Query: 1569 taaacag 1575
| |||||
Sbjct: 27045 tcaacag 27051
Score = 101 bits (51), Expect = 1e-17
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 2317 gatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccata 2376
|||||||| ||||||||||| || ||||| || || ||| ||||||||| |||||||||
Sbjct: 47327 gatggcaaggtgactcctgaagaggtagctgcagctgcaaattatctcaaagacaccata 47386
Query: 2377 gggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaa 2423
|| |||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 47387 ggagcagaaggcgtccaggagcttatcagcaatctttctaaagacaa 47433
Score = 93.7 bits (47), Expect = 3e-15
Identities = 142/173 (82%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 634 gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
|||||||| ||||||||||||||||| |||||||| ||||||| |||||||| |||||
Sbjct: 25224 gcatcccctgaagaatgtgatcaggcagtggaaggattaagcactgcaaaagcgaaagca 25283
Query: 694 aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
|||||||||| || | ||| || |||| ||||||| ||| | ||| |||| || |||
Sbjct: 25284 aaagctaagctggaggaag---tgcaaaagactgaccaatcagtggtacagaaattatgg 25340
Query: 754 gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
|||| |||||| |||||||| || ||| | ||| | ||||||||||||||||
Sbjct: 25341 gcaaagcttcttggtattggccctgctttacgaattattgcttcaatgagcag 25393
Score = 85.7 bits (43), Expect = 8e-13
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1889 aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctaggga 1943
||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 45662 aggctactgaagaagatttggctttgaaggaaatgactgagcctactgttaggga 45716
Score = 75.8 bits (38), Expect = 8e-10
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 2225 aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
|||| |||||||||||||| ||||||||||||||||||||||| ||||| | ||| |
Sbjct: 46823 aggttgatgctatgcttcaaaagttagaaaaggagattgatgatgttgatgctcgaattg 46882
Query: 2285 gaaatcgctggcaactgcttgatagg 2310
| ||||||||||| ||||| ||||||
Sbjct: 46883 gcaatcgctggcagctgctggatagg 46908
Score = 69.9 bits (35), Expect = 5e-08
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 1265 aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
||||||||||||||| | || |||||||| ||||| |||||||| || ||||| ||||
Sbjct: 26160 aggttaggaaaggtgggcatgcctccaatgacgaaattttgagctttgcaaagctattta 26219
Query: 1325 atgatgaattgaccttggataacatgagcag 1355
|||| || |||| |||||||||||||||||
Sbjct: 26220 atgacgagctgactttggataacatgagcag 26250
Score = 69.9 bits (35), Expect = 5e-08
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 1984 cagctctgtaatatcagtcaagcattggctgtgctggcatctg 2026
||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 45760 cagctttgtaatatcagtcaagcattggctgtgcttgcatctg 45802
Score = 65.9 bits (33), Expect = 8e-07
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 1580 gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
||||||||||||| || ||||| |||||| |||||||||| |||||||| ||||| ||||
Sbjct: 42659 gagactggctggatctatcactcaatcattctgtgccatcgtctcttctaatactctcaa 42718
Query: 1640 g 1640
|
Sbjct: 42719 g 42719
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaaggag 2079
|||||||| ||||||||| |||||||| | ||||||||||||||||||
Sbjct: 45906 gtctgttaccaaggagcgacaagagtttttaagccttgtcaacaaggag 45954
Score = 58.0 bits (29), Expect = 2e-04
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 2424 agaaggaaagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
|||||| || |||| |||||| ||||| |||||||||||||| ||| | |||||||||||
Sbjct: 47532 agaagggaatatccttgtggaagacattgtgaagctggcgtcacaaacagaggaaaacaa 47591
Query: 2484 c 2484
|
Sbjct: 47592 c 47592
Score = 56.0 bits (28), Expect = 7e-04
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1369 aatatgtgcaaatatatgggtattcgaccttttggcacggatcattacttgaggttcatg 1428
|||||||| ||||| ||||| || | |||||||||||| || || |||||| | ||||||
Sbjct: 26327 aatatgtgtaaatacatggggatccaaccttttggcacagaccactacttgcgattcatg 26386
Query: 1429 cttcgcaaaaaactac 1444
||||| || |||||||
Sbjct: 26387 cttcggaagaaactac 26402
>emb|CR855209.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0092E01,
complete sequence
Length = 86215
Score = 264 bits (133), Expect = 2e-66
Identities = 268/313 (85%)
Strand = Plus / Minus
Query: 808 gctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcat 867
||||| |||||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||
Sbjct: 21452 gctgactgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcat 21393
Query: 868 tactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtg 927
|| ||| | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||
Sbjct: 21392 tattggttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtg 21333
Query: 928 aaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaaca 987
||||||||||||||||||||||| |||||||||||||||| ||||| || || ||||||
Sbjct: 21332 aaacttgctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaaca 21273
Query: 988 gcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattc 1047
|| ||| | || ||||| |||||| ||||||||||||| |||| || |||||||||||
Sbjct: 21272 gctgatttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaattt 21213
Query: 1048 ctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaag 1107
|||||||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||
Sbjct: 21212 ttactaccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaag 21153
Query: 1108 atgaaagaagagg 1120
||||| |||||||
Sbjct: 21152 atgaaggaagagg 21140
Score = 190 bits (96), Expect = 2e-44
Identities = 132/144 (91%)
Strand = Plus / Minus
Query: 1126 ttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaa 1185
|||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 21038 ttgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaagatactgcaaaa 20979
Query: 1186 gaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagat 1245
||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||
Sbjct: 20978 gaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacagacagctgaagat 20919
Query: 1246 ctggacgaatttttaaacaaggtt 1269
||||| |||||||| |||||||||
Sbjct: 20918 ctggatgaatttttgaacaaggtt 20895
Score = 137 bits (69), Expect = 3e-28
Identities = 147/173 (84%)
Strand = Plus / Minus
Query: 634 gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
|||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 21740 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 21681
Query: 694 aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
|||||||||| |||||| || | |||| |||||||||||||| || | || || |||
Sbjct: 21680 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 21621
Query: 754 gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
|||| ||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 21620 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcag 21568
Score = 107 bits (54), Expect = 2e-19
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 2316 tgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccat 2375
|||||||||||| || ||||| || ||||| || || ||| ||||||||| ||||| ||
Sbjct: 16826 tgatggcaaagttacccctgacgaggtagcagctgcagcaaattatctcaaagacactat 16767
Query: 2376 agggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
|||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 16766 agggaaggaaggcgtccaagagcttattagcaatctttctaaagacaaag 16717
Score = 93.7 bits (47), Expect = 3e-15
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 1639 agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
|||||||||||| || |||||| |||||| |||||||| |||||||||||||| || |||
Sbjct: 19247 agagcttttaccatgtctgggaaaatgaagcccgaggaggctgttgtagcaacattatct 19188
Query: 1699 tctttgccagatgaagttgtggatacaattgggac 1733
||| | |||||||||||||| ||||| |||||||
Sbjct: 19187 tctcttccagatgaagttgtagatactgttgggac 19153
Score = 81.8 bits (41), Expect = 1e-11
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1895 ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 18389 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 18337
Score = 77.8 bits (39), Expect = 2e-10
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 1265 aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
||||||||||||||| | ||| || ||||| ||||| |||||||| || ||||| ||||
Sbjct: 20792 aggttaggaaaggtgggcatgtctcaaatgaagaaattttgagctttgcaaagctgttta 20733
Query: 1325 atgatgaattgaccttggataacatga 1351
|||||||| |||| |||||||||||||
Sbjct: 20732 atgatgaactgactttggataacatga 20706
Score = 75.8 bits (38), Expect = 8e-10
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 2225 aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
|||| ||||| ||||||||| |||||| || |||||||||||||| ||||||| ||| |
Sbjct: 17188 aggttgatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaatag 17129
Query: 2285 gaaatcgctggcaactgcttgatagg 2310
| || |||||||| ||||||||||||
Sbjct: 17128 gcaaccgctggcagctgcttgatagg 17103
Score = 69.9 bits (35), Expect = 5e-08
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 1450 attaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggag 1509
||||||||||||||||| ||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 20032 attaagaatgatgataagatgatccaggctgagggcgtggagtctctttctgaggaggag 19973
Query: 1510 ctccggcaagc 1520
|| || |||||
Sbjct: 19972 cttcgacaagc 19962
Score = 67.9 bits (34), Expect = 2e-07
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 1352 gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
|||||||||| |||||||||||||| ||||||||||| || | ||||||||| || || |
Sbjct: 20626 gcagagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagacc 20567
Query: 1412 attacttgaggttcatgcttcg 1433
| ||| ||| |||||||||||
Sbjct: 20566 actacctgacattcatgcttcg 20545
Score = 65.9 bits (33), Expect = 8e-07
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1580 gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
|||||||| |||| |||||||||||||| |||||||||| |||||||| ||||| ||||
Sbjct: 19388 gagactggttggatttgtcacttaatcattctgtgccatcatctcttctaatactatcaa 19329
Query: 1640 g 1640
|
Sbjct: 19328 g 19328
Score = 52.0 bits (26), Expect = 0.012
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1978 aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgc 2027
||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||
Sbjct: 18300 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgc 18251
Score = 46.1 bits (23), Expect = 0.72
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 197 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
||||||||| ||||| || ||||| |||||||||||||| ||||||
Sbjct: 22153 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 22107
>emb|CR855207.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306B06, complete
sequence
Length = 87509
Score = 264 bits (133), Expect = 2e-66
Identities = 268/313 (85%)
Strand = Plus / Minus
Query: 808 gctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcat 867
||||| |||||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||
Sbjct: 57294 gctgactgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcat 57235
Query: 868 tactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtg 927
|| ||| | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||
Sbjct: 57234 tattggttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtg 57175
Query: 928 aaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaaca 987
||||||||||||||||||||||| |||||||||||||||| ||||| || || ||||||
Sbjct: 57174 aaacttgctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaaca 57115
Query: 988 gcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattc 1047
|| ||| | || ||||| |||||| ||||||||||||| |||| || |||||||||||
Sbjct: 57114 gctgatttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaattt 57055
Query: 1048 ctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaag 1107
|||||||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||
Sbjct: 57054 ttactaccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaag 56995
Query: 1108 atgaaagaagagg 1120
||||| |||||||
Sbjct: 56994 atgaaggaagagg 56982
Score = 190 bits (96), Expect = 2e-44
Identities = 132/144 (91%)
Strand = Plus / Minus
Query: 1126 ttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaa 1185
|||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 56880 ttgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaagatactgcaaaa 56821
Query: 1186 gaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagat 1245
||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||
Sbjct: 56820 gaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacagacagctgaagat 56761
Query: 1246 ctggacgaatttttaaacaaggtt 1269
||||| |||||||| |||||||||
Sbjct: 56760 ctggatgaatttttgaacaaggtt 56737
Score = 137 bits (69), Expect = 3e-28
Identities = 147/173 (84%)
Strand = Plus / Minus
Query: 634 gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
|||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 57582 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 57523
Query: 694 aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
|||||||||| |||||| || | |||| |||||||||||||| || | || || |||
Sbjct: 57522 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 57463
Query: 754 gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
|||| ||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 57462 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcag 57410
Score = 107 bits (54), Expect = 2e-19
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 2316 tgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccat 2375
|||||||||||| || ||||| || ||||| || || ||| ||||||||| ||||| ||
Sbjct: 52668 tgatggcaaagttacccctgacgaggtagcagctgcagcaaattatctcaaagacactat 52609
Query: 2376 agggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
|||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 52608 agggaaggaaggcgtccaagagcttattagcaatctttctaaagacaaag 52559
Score = 93.7 bits (47), Expect = 3e-15
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 1639 agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
|||||||||||| || |||||| |||||| |||||||| |||||||||||||| || |||
Sbjct: 55089 agagcttttaccatgtctgggaaaatgaagcccgaggaggctgttgtagcaacattatct 55030
Query: 1699 tctttgccagatgaagttgtggatacaattgggac 1733
||| | |||||||||||||| ||||| |||||||
Sbjct: 55029 tctcttccagatgaagttgtagatactgttgggac 54995
Score = 81.8 bits (41), Expect = 1e-11
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1895 ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 54231 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 54179
Score = 77.8 bits (39), Expect = 2e-10
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 1265 aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
||||||||||||||| | ||| || ||||| ||||| |||||||| || ||||| ||||
Sbjct: 56634 aggttaggaaaggtgggcatgtctcaaatgaagaaattttgagctttgcaaagctgttta 56575
Query: 1325 atgatgaattgaccttggataacatga 1351
|||||||| |||| |||||||||||||
Sbjct: 56574 atgatgaactgactttggataacatga 56548
Score = 75.8 bits (38), Expect = 8e-10
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 2225 aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
|||| ||||| ||||||||| |||||| || |||||||||||||| ||||||| ||| |
Sbjct: 53030 aggttgatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaatag 52971
Query: 2285 gaaatcgctggcaactgcttgatagg 2310
| || |||||||| ||||||||||||
Sbjct: 52970 gcaaccgctggcagctgcttgatagg 52945
Score = 69.9 bits (35), Expect = 5e-08
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 1450 attaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggag 1509
||||||||||||||||| ||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 55874 attaagaatgatgataagatgatccaggctgagggcgtggagtctctttctgaggaggag 55815
Query: 1510 ctccggcaagc 1520
|| || |||||
Sbjct: 55814 cttcgacaagc 55804
Score = 67.9 bits (34), Expect = 2e-07
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 1352 gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
|||||||||| |||||||||||||| ||||||||||| || | ||||||||| || || |
Sbjct: 56468 gcagagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagacc 56409
Query: 1412 attacttgaggttcatgcttcg 1433
| ||| ||| |||||||||||
Sbjct: 56408 actacctgacattcatgcttcg 56387
Score = 65.9 bits (33), Expect = 8e-07
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1580 gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
|||||||| |||| |||||||||||||| |||||||||| |||||||| ||||| ||||
Sbjct: 55230 gagactggttggatttgtcacttaatcattctgtgccatcatctcttctaatactatcaa 55171
Query: 1640 g 1640
|
Sbjct: 55170 g 55170
Score = 52.0 bits (26), Expect = 0.012
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1978 aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgc 2027
||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||
Sbjct: 54142 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgc 54093
Score = 46.1 bits (23), Expect = 0.72
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 197 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
||||||||| ||||| || ||||| |||||||||||||| ||||||
Sbjct: 57995 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 57949
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
Length = 35498469
Score = 264 bits (133), Expect = 2e-66
Identities = 268/313 (85%)
Strand = Plus / Minus
Query: 808 gctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcat 867
||||| |||||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||
Sbjct: 24827358 gctgactgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcat 24827299
Query: 868 tactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtg 927
|| ||| | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||
Sbjct: 24827298 tattggttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtg 24827239
Query: 928 aaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaaca 987
||||||||||||||||||||||| |||||||||||||||| ||||| || || ||||||
Sbjct: 24827238 aaacttgctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaaca 24827179
Query: 988 gcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattc 1047
|| ||| | || ||||| |||||| ||||||||||||| |||| || |||||||||||
Sbjct: 24827178 gctgatttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaattt 24827119
Query: 1048 ctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaag 1107
|||||||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||
Sbjct: 24827118 ttactaccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaag 24827059
Query: 1108 atgaaagaagagg 1120
||||| |||||||
Sbjct: 24827058 atgaaggaagagg 24827046
Score = 190 bits (96), Expect = 2e-44
Identities = 132/144 (91%)
Strand = Plus / Minus
Query: 1126 ttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaa 1185
|||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 24826944 ttgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaagatactgcaaaa 24826885
Query: 1186 gaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagat 1245
||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||
Sbjct: 24826884 gaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacagacagctgaagat 24826825
Query: 1246 ctggacgaatttttaaacaaggtt 1269
||||| |||||||| |||||||||
Sbjct: 24826824 ctggatgaatttttgaacaaggtt 24826801
Score = 137 bits (69), Expect = 3e-28
Identities = 147/173 (84%)
Strand = Plus / Minus
Query: 634 gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
|||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 24827646 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 24827587
Query: 694 aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
|||||||||| |||||| || | |||| |||||||||||||| || | || || |||
Sbjct: 24827586 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 24827527
Query: 754 gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
|||| ||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 24827526 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcag 24827474
Score = 107 bits (54), Expect = 2e-19
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 2316 tgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccat 2375
|||||||||||| || ||||| || ||||| || || ||| ||||||||| ||||| ||
Sbjct: 24822732 tgatggcaaagttacccctgacgaggtagcagctgcagcaaattatctcaaagacactat 24822673
Query: 2376 agggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
|||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 24822672 agggaaggaaggcgtccaagagcttattagcaatctttctaaagacaaag 24822623
Score = 101 bits (51), Expect = 1e-17
Identities = 132/159 (83%)
Strand = Plus / Minus
Query: 1639 agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
|||||||||||| || |||||| |||||| |||||||| |||||||||||||| || |||
Sbjct: 24825154 agagcttttaccatgtctgggaaaatgaagcccgaggaggctgttgtagcaacattatct 24825095
Query: 1699 tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
||| | |||||||||||||| ||||| |||||||||| | || || |||||||| ||
Sbjct: 24825094 tctcttccagatgaagttgtagatactgttgggacagttcttccttcagaagattctgtg 24825035
Query: 1759 tctgagaggaggagaaaactggaattccttgagatgcag 1797
|| || |||| | | ||| |||||||||| || ||||||
Sbjct: 24825034 tccgacaggaagcggaaattggaattcctggaaatgcag 24824996
Score = 85.7 bits (43), Expect = 8e-13
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 1265 aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
||||||||||||||| || ||| || ||||| ||||| |||||||| || ||||| ||||
Sbjct: 24826698 aggttaggaaaggtggacatgtctcaaatgaagaaattttgagctttgcaaagctgttta 24826639
Query: 1325 atgatgaattgaccttggataacatga 1351
|||||||| |||| |||||||||||||
Sbjct: 24826638 atgatgaactgactttggataacatga 24826612
Score = 81.8 bits (41), Expect = 1e-11
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1895 ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 24824295 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 24824243
Score = 75.8 bits (38), Expect = 8e-10
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 2225 aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
|||| ||||| ||||||||| |||||| || |||||||||||||| ||||||| ||| |
Sbjct: 24823094 aggttgatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaatag 24823035
Query: 2285 gaaatcgctggcaactgcttgatagg 2310
| || |||||||| ||||||||||||
Sbjct: 24823034 gcaaccgctggcagctgcttgatagg 24823009
Score = 69.9 bits (35), Expect = 5e-08
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 1450 attaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggag 1509
||||||||||||||||| ||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 24825938 attaagaatgatgataagatgatccaggctgagggcgtggagtctctttctgaggaggag 24825879
Query: 1510 ctccggcaagc 1520
|| || |||||
Sbjct: 24825878 cttcgacaagc 24825868
Score = 67.9 bits (34), Expect = 2e-07
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 1352 gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
|||||||||| |||||||||||||| ||||||||||| || | ||||||||| || || |
Sbjct: 24826532 gcagagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagacc 24826473
Query: 1412 attacttgaggttcatgcttcg 1433
| ||| ||| |||||||||||
Sbjct: 24826472 actacctgacattcatgcttcg 24826451
Score = 65.9 bits (33), Expect = 8e-07
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1580 gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
|||||||| |||| |||||||||||||| |||||||||| |||||||| ||||| ||||
Sbjct: 24825295 gagactggttggatttgtcacttaatcattctgtgccatcatctcttctaatactatcaa 24825236
Query: 1640 g 1640
|
Sbjct: 24825235 g 24825235
Score = 52.0 bits (26), Expect = 0.012
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1978 aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgc 2027
||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||
Sbjct: 24824206 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgc 24824157
Score = 46.1 bits (23), Expect = 0.72
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 197 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
||||||||| ||||| || ||||| |||||||||||||| ||||||
Sbjct: 24828059 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 24828013
>emb|AL606627.3 |OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
complete sequence
Length = 170765
Score = 264 bits (133), Expect = 2e-66
Identities = 268/313 (85%)
Strand = Plus / Minus
Query: 808 gctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcat 867
||||| |||||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||
Sbjct: 89074 gctgactgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcat 89015
Query: 868 tactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtg 927
|| ||| | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||
Sbjct: 89014 tattggttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtg 88955
Query: 928 aaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaaca 987
||||||||||||||||||||||| |||||||||||||||| ||||| || || ||||||
Sbjct: 88954 aaacttgctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaaca 88895
Query: 988 gcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattc 1047
|| ||| | || ||||| |||||| ||||||||||||| |||| || |||||||||||
Sbjct: 88894 gctgatttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaattt 88835
Query: 1048 ctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaag 1107
|||||||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||
Sbjct: 88834 ttactaccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaag 88775
Query: 1108 atgaaagaagagg 1120
||||| |||||||
Sbjct: 88774 atgaaggaagagg 88762
Score = 190 bits (96), Expect = 2e-44
Identities = 132/144 (91%)
Strand = Plus / Minus
Query: 1126 ttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaa 1185
|||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 88660 ttgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaagatactgcaaaa 88601
Query: 1186 gaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagat 1245
||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||
Sbjct: 88600 gaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacagacagctgaagat 88541
Query: 1246 ctggacgaatttttaaacaaggtt 1269
||||| |||||||| |||||||||
Sbjct: 88540 ctggatgaatttttgaacaaggtt 88517
Score = 137 bits (69), Expect = 3e-28
Identities = 147/173 (84%)
Strand = Plus / Minus
Query: 634 gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
|||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 89362 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 89303
Query: 694 aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
|||||||||| |||||| || | |||| |||||||||||||| || | || || |||
Sbjct: 89302 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 89243
Query: 754 gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
|||| ||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 89242 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcag 89190
Score = 107 bits (54), Expect = 2e-19
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 2316 tgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccat 2375
|||||||||||| || ||||| || ||||| || || ||| ||||||||| ||||| ||
Sbjct: 84448 tgatggcaaagttacccctgacgaggtagcagctgcagcaaattatctcaaagacactat 84389
Query: 2376 agggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
|||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 84388 agggaaggaaggcgtccaagagcttattagcaatctttctaaagacaaag 84339
Score = 101 bits (51), Expect = 1e-17
Identities = 132/159 (83%)
Strand = Plus / Minus
Query: 1639 agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
|||||||||||| || |||||| |||||| |||||||| |||||||||||||| || |||
Sbjct: 86870 agagcttttaccatgtctgggaaaatgaagcccgaggaggctgttgtagcaacattatct 86811
Query: 1699 tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
||| | |||||||||||||| ||||| |||||||||| | || || |||||||| ||
Sbjct: 86810 tctcttccagatgaagttgtagatactgttgggacagttcttccttcagaagattctgtg 86751
Query: 1759 tctgagaggaggagaaaactggaattccttgagatgcag 1797
|| || |||| | | ||| |||||||||| || ||||||
Sbjct: 86750 tccgacaggaagcggaaattggaattcctggaaatgcag 86712
Score = 85.7 bits (43), Expect = 8e-13
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 1265 aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
||||||||||||||| || ||| || ||||| ||||| |||||||| || ||||| ||||
Sbjct: 88414 aggttaggaaaggtggacatgtctcaaatgaagaaattttgagctttgcaaagctgttta 88355
Query: 1325 atgatgaattgaccttggataacatga 1351
|||||||| |||| |||||||||||||
Sbjct: 88354 atgatgaactgactttggataacatga 88328
Score = 81.8 bits (41), Expect = 1e-11
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1895 ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 86011 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 85959
Score = 75.8 bits (38), Expect = 8e-10
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 2225 aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
|||| ||||| ||||||||| |||||| || |||||||||||||| ||||||| ||| |
Sbjct: 84810 aggttgatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaatag 84751
Query: 2285 gaaatcgctggcaactgcttgatagg 2310
| || |||||||| ||||||||||||
Sbjct: 84750 gcaaccgctggcagctgcttgatagg 84725
Score = 69.9 bits (35), Expect = 5e-08
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 1450 attaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggag 1509
||||||||||||||||| ||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 87654 attaagaatgatgataagatgatccaggctgagggcgtggagtctctttctgaggaggag 87595
Query: 1510 ctccggcaagc 1520
|| || |||||
Sbjct: 87594 cttcgacaagc 87584
Score = 67.9 bits (34), Expect = 2e-07
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 1352 gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
|||||||||| |||||||||||||| ||||||||||| || | ||||||||| || || |
Sbjct: 88248 gcagagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagacc 88189
Query: 1412 attacttgaggttcatgcttcg 1433
| ||| ||| |||||||||||
Sbjct: 88188 actacctgacattcatgcttcg 88167
Score = 65.9 bits (33), Expect = 8e-07
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1580 gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
|||||||| |||| |||||||||||||| |||||||||| |||||||| ||||| ||||
Sbjct: 87011 gagactggttggatttgtcacttaatcattctgtgccatcatctcttctaatactatcaa 86952
Query: 1640 g 1640
|
Sbjct: 86951 g 86951
Score = 52.0 bits (26), Expect = 0.012
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1978 aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgc 2027
||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||
Sbjct: 85922 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgc 85873
Score = 46.1 bits (23), Expect = 0.72
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 197 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
||||||||| ||||| || ||||| |||||||||||||| ||||||
Sbjct: 89775 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 89729
>gb|AY664414.1 | Zea mays cultivar B73 locus 9008, complete sequence
Length = 339089
Score = 127 bits (64), Expect = 2e-25
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 1662 aatgaaacccgaggatgctgttgtagcaacgttgtcttctttgccagatgaagttgtgga 1721
||||||||| ||||| || ||||||||||| || ||||| |||||||||||||||| ||
Sbjct: 15200 aatgaaacctgaggaggccgttgtagcaaccttatcttccctgccagatgaagttgtcga 15259
Query: 1722 tacaattgggacagtattgccatctgaagattcagtttctgagaggaggagaaaactgga 1781
|||| ||||||| ||| |||| ||||||||||| ||||| ||||||| ||||||| ||||
Sbjct: 15260 tacagttgggactgtactgccttctgaagattctgtttcagagaggaagagaaaattgga 15319
Query: 1782 attccttgagatgcag 1797
||| || |||||||||
Sbjct: 15320 atttctggagatgcag 15335
Score = 101 bits (51), Expect = 1e-17
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 2317 gatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccata 2376
|||||||| ||||||||||| || ||||| || || ||| ||||||||| |||||||||
Sbjct: 19402 gatggcaaggtgactcctgaagaggtagctgcagctgcaaattatctcaaagacaccata 19461
Query: 2377 gggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaa 2423
|| |||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 19462 ggagcagaaggcgtccaggagcttatcagcaatctttctaaagacaa 19508
Score = 85.7 bits (43), Expect = 8e-13
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1889 aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctaggga 1943
||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 17737 aggctactgaagaagatttggctttgaaggaaatgactgagcctactgttaggga 17791
Score = 75.8 bits (38), Expect = 8e-10
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 2225 aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
|||| |||||||||||||| ||||||||||||||||||||||| ||||| | ||| |
Sbjct: 18898 aggttgatgctatgcttcaaaagttagaaaaggagattgatgatgttgatgctcgaattg 18957
Query: 2285 gaaatcgctggcaactgcttgatagg 2310
| ||||||||||| ||||| ||||||
Sbjct: 18958 gcaatcgctggcagctgctggatagg 18983
Score = 69.9 bits (35), Expect = 5e-08
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 1984 cagctctgtaatatcagtcaagcattggctgtgctggcatctg 2026
||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 17835 cagctttgtaatatcagtcaagcattggctgtgcttgcatctg 17877
Score = 65.9 bits (33), Expect = 8e-07
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 1580 gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
||||||||||||| || ||||| |||||| |||||||||| |||||||| ||||| ||||
Sbjct: 15044 gagactggctggatctatcactcaatcattctgtgccatcgtctcttctaatactctcaa 15103
Query: 1640 g 1640
|
Sbjct: 15104 g 15104
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaaggag 2079
|||||||| ||||||||| |||||||| | ||||||||||||||||||
Sbjct: 17981 gtctgttaccaaggagcgacaagagtttttaagccttgtcaacaaggag 18029
Score = 58.0 bits (29), Expect = 2e-04
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 2424 agaaggaaagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
|||||| || |||| |||||| ||||| |||||||||||||| ||| | |||||||||||
Sbjct: 19607 agaagggaatatccttgtggaagacattgtgaagctggcgtcacaaacagaggaaaacaa 19666
Query: 2484 c 2484
|
Sbjct: 19667 c 19667
>gb|AC001229.1 |F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 109560
Score = 105 bits (53), Expect = 9e-19
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 1012 gttgctgtgttcattgttgtcccattcatggaattcctactaccagtgtttcttaagttg 1071
||||| || |||||| |||| ||||||||||| || | ||||| |||||||||||||||
Sbjct: 44275 gttgcagttttcattattgttccattcatggagtttttgctaccggtgtttcttaagttg 44216
Query: 1072 tttccaaatatgctgccatcaactttccaagacaagatgaaagaagagg 1120
|| ||||| |||||||| ||||||||||| || ||||||||||||||||
Sbjct: 44215 ttcccaaacatgctgccgtcaactttccaggataagatgaaagaagagg 44167
Score = 81.8 bits (41), Expect = 1e-11
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 1139 tgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaagaaatggcaaagg 1198
|||| ||||| ||||| ||||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 43983 tgaatgcaagaatggaatatgctaagtttctccaagatactgtcaaagaaatggcaaagg 43924
Query: 1199 aagttcaaacatcacgtagtggaga 1223
|||| ||||| || || ||||||||
Sbjct: 43923 aagtccaaacctctcgcagtggaga 43899
Score = 52.0 bits (26), Expect = 0.012
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1363 ttggtaaatatgtgcaaatatatgggtatt 1392
|||||||||||||||||||| |||||||||
Sbjct: 43586 ttggtaaatatgtgcaaatacatgggtatt 43557
Score = 50.1 bits (25), Expect = 0.046
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 836 ggaaagatgaatttatttccacactgcagcattactggctaggaacaaagctactctggg 895
||||||||||||||| || || ||||| ||||||||||| || |||||| | || ||||
Sbjct: 44451 ggaaagatgaatttaagtctactctgcaacattactggctggggacaaagttgctttggg 44392
Query: 896 cagatgttaggat 908
| ||||| |||||
Sbjct: 44391 ctgatgtcaggat 44379
Score = 48.1 bits (24), Expect = 0.18
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 2031 gtctgttagcaaggagcgtcaagagttcctga 2062
||||||||||| ||||||| ||||||||||||
Sbjct: 42268 gtctgttagcatggagcgtgaagagttcctga 42237
>emb|AL357055.18 | Human DNA sequence from clone RP11-389O22 on chromosome 1 Contains the
3' end of a novel gene, the 5' end of a novel gene, the
LRIG2 gene for leucine-rich repeats and
immunoglobulin-like domains 2, a ring finger protein 12
(RNF12) pseudogene, a ribosomal protein S19 (RPS19)
pseudogene, a ribosomal protein S15 (RPS15) pseudogene and
a CpG island, complete sequence
Length = 188812
Score = 44.1 bits (22), Expect = 2.8
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 cctcccttcccctctgctcccc 65
||||||||||||||||||||||
Sbjct: 39196 cctcccttcccctctgctcccc 39217
>emb|AL606907.9 | Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete
sequence
Length = 208265
Score = 44.1 bits (22), Expect = 2.8
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 37 cccctttcctcccttcccctctgctcccca 66
||||||||||||| |||||||| |||||||
Sbjct: 146010 cccctttcctcccctcccctctcctcccca 145981
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 560,239,947
Number of extensions: 31540535
Number of successful extensions: 172353
Number of sequences better than 10.0: 71
Number of HSP's gapped: 172333
Number of HSP's successfully gapped: 231
Length of query: 2912
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2889
Effective length of database: 18,503,978,556
Effective search space: 53457994048284
Effective search space used: 53457994048284
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)