ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf73j13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY738115.1| Triticum aestivum Ca2+ binding protein cbp1 (cbp1... 2837 0.0
2ref|NM_001053922.1| Oryza sativa (japonica cultivar-group) Os02g... 1489 0.0
3dbj|AK120177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 1489 0.0
4dbj|AK100424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 1489 0.0
5ref|NM_001059737.1| Oryza sativa (japonica cultivar-group) Os04g... 904 0.0
6dbj|AK068782.1| Oryza sativa (japonica cultivar-group) cDNA clon... 904 0.0
7gb|AY108574.2| Zea mays PCO113050 mRNA sequence 607 e-170
8gb|AY110168.1| Zea mays CL28548_1 mRNA sequence 462 e-126
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 383 e-102
10dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 383 e-102
11dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic D... 383 e-102
12gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence 270 3e-68
13emb|CR855209.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 264 2e-66
14emb|CR855207.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 264 2e-66
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 264 2e-66
16emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 264 2e-66
17ref|NM_105228.2| Arabidopsis thaliana calcium ion binding (AT1G6... 200 2e-47
18gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence 127 2e-25
19gb|AC189484.1| Brassica rapa subsp. pekinensis clone KBrB083K19,... 123 4e-24
20ref|NM_115844.2| Arabidopsis thaliana unknown protein (AT3G59820... 107 2e-19
21ref|NM_001035820.1| Arabidopsis thaliana unknown protein (AT3G59... 107 2e-19
22gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thali... 105 9e-19
23gb|AY112372.1| Zea mays CL6272_1 mRNA sequence 101 1e-17
24gb|AC129715.48| Medicago truncatula clone mth2-36p23, complete s... 94 3e-15
25emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, B... 66 8e-07
26emb|CT832021.1| Oryza sativa (indica cultivar-group) cDNA clone:... 62 1e-05
27ref|NM_001061629.1| Oryza sativa (japonica cultivar-group) Os05g... 62 1e-05
28dbj|AK073229.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-05
29dbj|AK066158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-05
30dbj|AK061533.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-05
31gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome... 58 2e-04
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-04
33gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, com... 50 0.046
34gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, com... 50 0.046
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.046
36dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.046
37dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.046
38ref|NM_001077618.1| Danio rerio zgc:152924 (zgc:152924), mRNA >g... 48 0.18
39ref|XM_519714.2| PREDICTED: Pan troglodytes leucine zipper-EF-ha... 48 0.18
40ref|XM_001171298.1| PREDICTED: Pan troglodytes leucine zipper-EF... 48 0.18
41gb|AC073520.6| Homo sapiens BAC clone RP11-792H4 from 7, complet... 48 0.18
42dbj|AB168539.1| Macaca fascicularis testis cDNA clone: QtsA-1286... 48 0.18
43ref|XM_799670.1| Trypanosoma cruzi strain CL Brener DNA repair p... 48 0.18
44ref|XM_801429.1| Trypanosoma cruzi strain CL Brener DNA repair p... 48 0.18
45ref|XM_682597.1| PREDICTED: Danio rerio similar to Zinc finger, ... 48 0.18
46ref|XM_681820.1| PREDICTED: Danio rerio similar to Zinc finger, ... 48 0.18
47gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromo... 48 0.18
48emb|BX088530.6| Zebrafish DNA sequence from clone DKEY-56F11 in ... 48 0.18
49emb|BX248510.3| Zebrafish DNA sequence from clone DKEY-88P24 in ... 48 0.18
50gb|AC146383.4| Pan troglodytes BAC clone RP43-125D18 from 7, com... 46 0.72
51gb|AC146220.3| Pan troglodytes BAC clone RP43-27B14 from 7, comp... 46 0.72
52gb|AC152829.2| Ornithorhynchus anatinus BAC clone OABb-466A1 fro... 46 0.72
53gb|AC008266.3|AC008266 Homo sapiens PAC clone RP5-1145A24 from 7... 46 0.72
54gb|AC006960.1|AC006960 Homo sapiens clone RP11-182J23 from 7p14-... 46 0.72
55gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 44 2.8
56gb|BC077601.1| Xenopus laevis UDP-Gal:betaGlcNAc beta 1,4- galac... 44 2.8
57gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosom... 44 2.8
58gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, comple... 44 2.8
59emb|CR848708.12| Wallaby DNA sequence from clone MEKBa-201B9, co... 44 2.8
60emb|AL513016.5| Human DNA sequence from clone RP11-474O21 on chr... 44 2.8
61emb|AL357055.18| Human DNA sequence from clone RP11-389O22 on ch... 44 2.8
62gb|AC122360.4| Mus musculus BAC clone RP23-428P21 from chromosom... 44 2.8
63emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chr... 44 2.8
64gb|AC114814.5| Homo sapiens BAC clone RP11-1345D17 from 2, compl... 44 2.8
65gb|AC087623.21| Homo sapiens chromosome 8, clone RP11-350N15, co... 44 2.8
66gb|AC102898.15| Mus musculus chromosome 7, clone RP24-321O23, co... 44 2.8
67gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, comple... 44 2.8
68emb|AL832241.1|HSM803548 Homo sapiens mRNA; cDNA DKFZp686I0477 (... 44 2.8
69gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, compl... 44 2.8
70gb|AY173945.1| Homo sapiens leucine zipper-EF-hand containing tr... 44 2.8
71emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chro... 44 2.8

>gb|AY738115.1| Triticum aestivum Ca2+ binding protein cbp1 (cbp1) mRNA, complete cds
          Length = 2374
 Score = 2837 bits (1431), Expect = 0.0
 Identities = 1567/1614 (97%), Gaps = 3/1614 (0%)
 Strand = Plus / Plus

                                                                        
Query: 184  tgggaaggtgagtagcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
            ||||| |||||| |||||||||  |||||||||||||| |||||||||||||||||||||
Sbjct: 1    tgggagggtgagaagcaaccaagtatggcgtcaagggcgatcattaggagaagaaagtat 60

                                                                        
Query: 244  ctcttggatcatgttaacgcacctatcctctcgtcttcctcctcttcattcctccatgga 303
            |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61   ctcttggatcatgttaacacacctatcctctcgtcttcctcctcttcattccgccatgga 120

                                                                        
Query: 304  acatttggttttaagcctgagccaagaatagcacaacaatttcttgagcaaagcttaggg 363
            ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121  acatttggtttcaagcctgagccaagaatagcacaaccatttcttgagcaaagcttaggg 180

                                                                        
Query: 364  gactcgaagtctgagaaggagaatgagcaatatagtgtcaattttacaaaggggggtctg 423
            ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 181  gactcgaagtctgagaaggagaaggagcaatatagtgtcgatttgacaaaggggggtctg 240

                                                                        
Query: 424  ctaggtcctgataacgggcttctgcgacgtccagctcacgtgatttctcactatggttat 483
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 241  ctaggtcctgataacgggcttctgcgacgtccagctcacgtgatttctcactatggctat 300

                                                                        
Query: 484  ggaattggaaggaatgaatttacattgcctttgggagctagaggtttgttgcagtcagtt 543
            |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 301  ggaattggaaggaatgaattcacattgcctttcggagctagaggtttgttgcagtcagtt 360

                                                                        
Query: 544  cgcaaagcatcaactgcaactgctgggcaacctaaattggatattgaagaacagggtgat 603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  cgcaaagcatcaactgcaactgctgggcaacctaaattggatattgaagaacagggtgat 420

                                                                        
Query: 604  aatcaaaaccagaataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtg 663
             |   |||||||||||||||       || ||||||||||||||||||||||||||||||
Sbjct: 421  ga---aaaccagaataaaaggaaaaaagaggcatccccagaagaatgtgatcaggctgtg 477

                                                                        
Query: 664  gaagggctaagcacggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaag 723
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478  gaagggctaagcacggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaag 537

                                                                        
Query: 724  gctgaccagtcaatcgtaaagaagttctgggcaaggcttctgggtattggtccggctctt 783
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538  gctgaccagtcaatcgtaaagaagttctgggcaaggcttctgggtattggtccggctctt 597

                                                                        
Query: 784  cgagctgttgcttcaatgagcagagctgattgggctgcaaaactgaagcatgggaaagat 843
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598  cgagctgttgcttcaatgagcagagctgattgggctgcaaaactgaagcatgggaaagat 657

                                                                        
Query: 844  gaatttatttccacactgcagcattactggctaggaacaaagctactctgggcagatgtt 903
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 658  gaatttatttccacactgcagcattactggctaggaacaaagctactctgggcagatatt 717

                                                                        
Query: 904  aggatttcatcaagattgctggtgaaacttgctggtggaaagagcctctcaagaagagag 963
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718  aggatttcatcaagattgctggtgaaacttgctggtggaaagagcctctcaagaagagag 777

                                                                        
Query: 964  aggcagcagctcacccgtacaacagcagatatcttcaggctggtacctgttgctgtgttc 1023
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 778  aggcaacagctcacccgtacaacagcagatatcttcaggctggtacctgttgccgtgttc 837

                                                                        
Query: 1024 attgttgtcccattcatggaattcctactaccagtgtttcttaagttgtttccaaatatg 1083
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838  attgttgtcccgttcatggaattcctactaccagtgtttcttaagttgtttccaaatatg 897

                                                                        
Query: 1084 ctgccatcaactttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaa 1143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898  ctgccatcaactttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaa 957

                                                                        
Query: 1144 gcaaggatggagtatgcaaagtttctacaagatactgcaaaagaaatggcaaaggaagtt 1203
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 958  gcaaggatggagtatgcaaagtttctgcaagatactgcaaaagaaatggcaaaggaagtt 1017

                                                                        
Query: 1204 caaacatcacgtagtggagaaacaaaacagacagctgaagatctggacgaatttttaaac 1263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 caaacatcacgtagtggagaaacaaaacagacagctgaagatctggacgaatttttaaac 1077

                                                                        
Query: 1264 aaggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttt 1323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 aaggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttt 1137

                                                                        
Query: 1324 aatgatgaattgaccttggataacatgagcagagcacgcttggtaaatatgtgcaaatat 1383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1138 aatgatgaattgaccttggataacatgagcagagcacgcttggtaaatatgtgcaaatat 1197

                                                                        
Query: 1384 atgggtattcgaccttttggcacggatcattacttgaggttcatgcttcgcaaaaaacta 1443
            ||||||||||||| |||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 1198 atgggtattcgactttttggtacagaccattacttgagattcatgcttcggaaaaaacta 1257

                                                                        
Query: 1444 cgcgacattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaa 1503
            || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1258 cgagacattaagaatgatgataaaatgattcaagctgagggtgttgattctcttcctgaa 1317

                                                                        
Query: 1504 gaggagctccggcaagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaa 1563
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1318 gaggagctccggcaagcctgccgtgatcgcggtcaccttggtctgcggtcaacagaagaa 1377

                                                                        
Query: 1564 atgcgtaaacagctacgagactggctggacctgtcacttaatcatgctgtgccatcttct 1623
            |||||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 1378 atgcgtcaacagctacgagactggttggatctatcacttaatcatgctgtgccatcttct 1437

                                                                        
Query: 1624 cttctcatactttcaagagcttttaccctggctgggagaatgaaacccgaggatgctgtt 1683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1438 cttctcatactttcaagagcttttaccctggctgggagaatgaaacccgaggatgctgtg 1497

                                                                        
Query: 1684 gtagcaacgttgtcttctttgccagatgaagttgtggatacaattgggacagtattgcca 1743
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1498 gtagcaacattgtcttctttgccagatgaagttgtggatacaattgggacagtattgcca 1557

                                                                  
Query: 1744 tctgaagattcagtttctgagaggaggagaaaactggaattccttgagatgcag 1797
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1558 tctgaagattcagtttctgagaggaggagaaaactggaattccttgagatgcag 1611



 Score = 1065 bits (537), Expect = 0.0
 Identities = 591/609 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1875 tctcacagaacaggaggctgctgaagaagatttggctttaaaggaaatgactgagcctac 1934
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1689 tctcacagaacaggaggctgctgaagaagatttggctttaaaggaaatgactgagcctac 1748

                                                                        
Query: 1935 tgctagggaagaagaagaactgactgacgcaaaacgacatgacaaggaacagctctgtaa 1994
            |||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||
Sbjct: 1749 tgctagggaagaagaagaactgacagaagcaaaacaacatgacaaggaacagctctgtaa 1808

                                                                        
Query: 1995 tatcagtcaagcattggctgtgctggcatctgcatcgtctgttagcaaggagcgtcaaga 2054
            |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1809 tatcagtcgagcattggctgtgctagcatctgcatcgtctgttagcaaggagcgtcaaga 1868

                                                                        
Query: 2055 gttcctgagccttgtcaacaaggagataaaactatataactccatgcttgaaagagaaga 2114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1869 gttcctgagccttgtcaacaaggagataaaactatataactccatgcttgaaagagaaga 1928

                                                                        
Query: 2115 cacagagggggcagaagaagctaagaaggcatatatggctgttagaggggagtcagacga 2174
            |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 1929 cacagatggggcagaagaagctaagaaggcatatatggctgctagagaggagtcaggcga 1988

                                                                        
Query: 2175 caccacagaggttgcttcagaggaaaaggtctcgtcggcgctgattgacaaggtggatgc 2234
            |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 1989 caccacagaggttgcttcagaggaaaaggtctcgtcagcgctgattgacaaggttgatgc 2048

                                                                        
Query: 2235 tatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcggaaatcgctg 2294
            ||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2049 tatgcttcaggaactagaaaaggagattgatgatgtggatgcacaaatcggaaaccgctg 2108

                                                                        
Query: 2295 gcaactgcttgatagggatcatgatggcaaagtgactcctgaggaagtagcggcggccgc 2354
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2109 gcaactgcttgatagggatcatgatggcaaagtgactcctgaggaagtagcagcggcggc 2168

                                                                        
Query: 2355 agcttatctcaaggacaccatagggaaagaaggcgtccaagagcttatcagcaagctttc 2414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2169 agcttatctcaaggacaccatagggaaagaaggcgtccaagagcttatcagcaagctttc 2228

                                                                        
Query: 2415 taaagacaaagaaggaaagatccgtgtggaggacatcgtgaagctggcgtctcaagccga 2474
            |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 2229 taaagacaaagaaggaaagatccgtgtggaagacatcgtgaagctggggtctcaagccga 2288

                     
Query: 2475 ggaaaacaa 2483
            |||||||||
Sbjct: 2289 ggaaaacaa 2297



 Score = 60.0 bits (30), Expect = 5e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                  
Query: 2507 cacggcattagtcgggaacacatttgacgacttctttg 2544
            |||||||||||||||||||||| |||||||||| ||||
Sbjct: 2318 cacggcattagtcgggaacacacttgacgacttttttg 2355



to top

>ref|NM_001053922.1| Oryza sativa (japonica cultivar-group) Os02g0608400 (Os02g0608400)
            mRNA, complete cds
          Length = 2966

 Score = 1489 bits (751), Expect = 0.0
 Identities = 1208/1362 (88%), Gaps = 3/1362 (0%)
 Strand = Plus / Plus

                                                                        
Query: 439  gggcttctgcgacgtccagctcacgtgatttctcactatggttatggaattggaaggaat 498
            ||||||||||| || ||||| || | ||||||||    || |||||||||||||||||| 
Sbjct: 539  gggcttctgcggcgcccagcccatgggatttctctacctgcttatggaattggaaggaag 598

                                                                        
Query: 499  gaatttacattgcctttgggagctagaggtttgttgcagtcagttcgcaaagcatcaact 558
            ||||||   |||||| |||| ||||||  |||| |||||||||| |||| ||| ||||||
Sbjct: 599  gaatttgggttgcctatgggtgctagacatttgctgcagtcagtccgcacagcctcaact 658

                                                                        
Query: 559  gcaactgctgggcaacctaaattggatattgaaga---acagggtgataatcaaaaccag 615
            ||||| |||||||||||||| ||||||||||||||   |||| ||||  |||| || |||
Sbjct: 659  gcaacagctgggcaacctaagttggatattgaagatgaacagagtgaggatcagaaacag 718

                                                                        
Query: 616  aataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtggaagggctaagc 675
            || |||||       || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 719  aacaaaaggaaaaaggaggcatccccagaagaatgtgatcaggctgtggaaggcctaagc 778

                                                                        
Query: 676  acggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaaggctgaccagtca 735
            |  ||||||||||||||||||||||||||||| ||||| ||  ||||||||| ||| |||
Sbjct: 779  agtgcaaaagctaaagccaaagctaagcaggtacaagaatctgtaaaggctggccaatca 838

                                                                        
Query: 736  atcgtaaagaagttctgggcaaggcttctgggtattggtccggctcttcgagctgttgct 795
            || |||   || |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 839  attgtacgaaaattctgggcgaggcttctgggtattggtcctgctctccgagctgttgct 898

                                                                        
Query: 796  tcaatgagcagagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttcc 855
            || |||||||||||||||||||||||||| ||||||||  |||| ||||||||| | || 
Sbjct: 899  tcgatgagcagagctgattgggctgcaaagctgaagcactggaaggatgaatttgtgtca 958

                                                                        
Query: 856  acactgcagcattactggctaggaacaaagctactctgggcagatgttaggatttcatca 915
            || ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 959  acgctgcagcattactggttagggacaaagctactctgggcagatgtgaggatttcgtca 1018

                                                                        
Query: 916  agattgctggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctc 975
            ||||| ||||||||||||||||||||||||| ||| |||||||||||||| || || || 
Sbjct: 1019 agattactggtgaaacttgctggtggaaagaacctttcaagaagagagagacaacaactg 1078

                                                                        
Query: 976  acccgtacaacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtccca 1035
            |||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |||
Sbjct: 1079 acccgtacaacagcagatatcttcaggctggtaccttttgctgtgttcatcattgttcca 1138

                                                                        
Query: 1036 ttcatggaattcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaact 1095
            |||||||| ||| |||| |||||||| || ||||| |||||||||||||| || ||||||
Sbjct: 1139 ttcatggagttcttacttccagtgttcctcaagttatttccaaatatgcttccctcaact 1198

                                                                        
Query: 1096 ttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaagcaaggatggag 1155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1199 ttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaagcaagaatggag 1258

                                                                        
Query: 1156 tatgcaaagtttctacaagatactgcaaaagaaatggcaaaggaagttcaaacatcacgt 1215
            ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 tatgccaagtttttgcaagatactgcaaaagaaatggcaaaggaagttcaaacatcacgt 1318

                                                                        
Query: 1216 agtggagaaacaaaacagacagctgaagatctggacgaatttttaaacaaggttaggaaa 1275
            |||||||||| |||||| ||||| |||||||| || |||||||| ||||||||||||| |
Sbjct: 1319 agtggagaaataaaacaaacagccgaagatcttgatgaatttttgaacaaggttaggaga 1378

                                                                        
Query: 1276 ggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagctttttaatgatgaattg 1335
            ||||||| ||| || |||||||||||||||| |||||||||||| |||||||||||  ||
Sbjct: 1379 ggtgaacatgtctcaaatgatgaaatcttgaacttcgcgaagctgtttaatgatgagctg 1438

                                                                        
Query: 1336 accttggataacatgagcagagcacgcttggtaaatatgtgcaaatatatgggtattcga 1395
            || |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 1439 actttggataacatgagcagaccacgcttggtaaacatgtgcaaatatatgggtattcga 1498

                                                                        
Query: 1396 ccttttggcacggatcattacttgaggttcatgcttcgcaaaaaactacgcgacattaag 1455
            ||||| || || || || ||||||||||||||||||||||||||||| |  |||||||||
Sbjct: 1499 cctttcggtactgaccactacttgaggttcatgcttcgcaaaaaactgcaagacattaag 1558

                                                                        
Query: 1456 aatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggagctccgg 1515
            ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| || |||
Sbjct: 1559 aatgacgataagatgattcaagctgagggtgttgagtctctctctgaagaggaacttcgg 1618

                                                                        
Query: 1516 caagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcgtaaacag 1575
            ||||| || ||||| || |||||||| ||| ||| ||||||||||||||||||  |||||
Sbjct: 1619 caagcctgtcgtgaacgtggtcacctaggtttgctgtcaacagaagaaatgcgccaacag 1678

                                                                        
Query: 1576 ctacgagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactt 1635
            || ||||| ||| |||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 1679 ctccgagattggttggatctctcacttaatcatgctgtgccatcctctcttctcatactt 1738

                                                                        
Query: 1636 tcaagagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttg 1695
            ||||||||||||||| |  |||||| |||||| || ||||| |||||||||||||| || 
Sbjct: 1739 tcaagagcttttaccgtatctgggaaaatgaagcctgaggaggctgttgtagcaacctta 1798

                                                                        
Query: 1696 tcttctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattca 1755
            |||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||| 
Sbjct: 1799 tcttctctaccagatgaagttgtggatacagttgggaccgtattgccatctgaagattcg 1858

                                                      
Query: 1756 gtttctgagaggaggagaaaactggaattccttgagatgcag 1797
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1859 gtttctgagaggaggagaaaactggaattccttgagatgcag 1900



 Score =  513 bits (259), Expect = e-141
 Identities = 511/595 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1889 aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaag 1948
            ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||
Sbjct: 1992 aggctgctgaagaagatttggctttgaaggaaatgactggtcctactgctagggaagaag 2051

                                                                        
Query: 1949 aagaactgactgacgcaaaacgacatgacaaggaacagctctgtaatatcagtcaagcat 2008
            |||||||||  || |||||||  || || |||||| ||||||||||| | |||| |||| 
Sbjct: 2052 aagaactgagagaagcaaaacagcacgataaggaaaagctctgtaattttagtcgagcac 2111

                                                                        
Query: 2009 tggctgtgctggcatctgcatcgtctgttagcaaggagcgtcaagagttcctgagccttg 2068
            ||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2112 tggctgtactggcatccgcatcgtctgttagcaaggagcgtcaagagttcctcagccttg 2171

                                                                        
Query: 2069 tcaacaaggagataaaactatataactccatgcttgaaagagaagacacagagggggcag 2128
            ||||||| |||||  |||| |||||||| ||||||||||  || |  ||||| || | ||
Sbjct: 2172 tcaacaaagagattgaactgtataactctatgcttgaaaaggagggtacagaaggtgaag 2231

                                                                        
Query: 2129 aagaagctaagaaggcatatatggctgttagaggggagtcagacgacaccacagaggttg 2188
            | ||||||||||| || || ||||||| |||||  ||||| ||| |  |  | |||||||
Sbjct: 2232 aggaagctaagaaagcttacatggctgctagagaagagtcggacaaggctgctgaggttg 2291

                                                                        
Query: 2189 cttcagaggaaaaggtctcgtcggcgctgattgacaaggtggatgctatgcttcagggat 2248
             |  ||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||  ||
Sbjct: 2292 atgaagaagaaaaggtctcatcggcgctgattgagaaggttgatgctatgctccagaaat 2351

                                                                        
Query: 2249 tagaaaaggagattgatgatgtggatgcacaaatcggaaatcgctggcaactgcttgata 2308
            ||||||||||||||||||| |||||||||||||| ||||| || |||||| | |||||||
Sbjct: 2352 tagaaaaggagattgatgacgtggatgcacaaattggaaaccgatggcaaattcttgata 2411

                                                                        
Query: 2309 gggatcatgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaagg 2368
            |||||| ||||||||| |||||||||||||| |||||| | || ||||||||||| ||||
Sbjct: 2412 gggatcttgatggcaaggtgactcctgaggaggtagcgtcagcagcagcttatctgaagg 2471

                                                                        
Query: 2369 acaccatagggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaagaag 2428
            | || ||||| || |||||||||||||||||| ||||||| || |||||||||||||| |
Sbjct: 2472 atacaataggaaaggaaggcgtccaagagcttgtcagcaacctctctaaagacaaagatg 2531

                                                                   
Query: 2429 gaaagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
            | |||||||||||||| ||||| ||||||||||| || ||| | || ||||||||
Sbjct: 2532 ggaagatccgtgtggaagacattgtgaagctggcatcacaaacagatgaaaacaa 2586



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                       
Query: 158 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 217
           ||||| |||||||||||||| |  ||||| |||||| | |||||  ||  ||||| ||||
Sbjct: 261 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 320

                                                                     
Query: 218 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 275
           ||||  |||| || ||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 321 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 378



to top

>dbj|AK120177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033F11, full
            insert sequence
          Length = 2323

 Score = 1489 bits (751), Expect = 0.0
 Identities = 1208/1362 (88%), Gaps = 3/1362 (0%)
 Strand = Plus / Plus

                                                                        
Query: 439  gggcttctgcgacgtccagctcacgtgatttctcactatggttatggaattggaaggaat 498
            ||||||||||| || ||||| || | ||||||||    || |||||||||||||||||| 
Sbjct: 538  gggcttctgcggcgcccagcccatgggatttctctacctgcttatggaattggaaggaag 597

                                                                        
Query: 499  gaatttacattgcctttgggagctagaggtttgttgcagtcagttcgcaaagcatcaact 558
            ||||||   |||||| |||| ||||||  |||| |||||||||| |||| ||| ||||||
Sbjct: 598  gaatttgggttgcctatgggtgctagacatttgctgcagtcagtccgcacagcctcaact 657

                                                                        
Query: 559  gcaactgctgggcaacctaaattggatattgaaga---acagggtgataatcaaaaccag 615
            ||||| |||||||||||||| ||||||||||||||   |||| ||||  |||| || |||
Sbjct: 658  gcaacagctgggcaacctaagttggatattgaagatgaacagagtgaggatcagaaacag 717

                                                                        
Query: 616  aataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtggaagggctaagc 675
            || |||||       || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 718  aacaaaaggaaaaaggaggcatccccagaagaatgtgatcaggctgtggaaggcctaagc 777

                                                                        
Query: 676  acggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaaggctgaccagtca 735
            |  ||||||||||||||||||||||||||||| ||||| ||  ||||||||| ||| |||
Sbjct: 778  agtgcaaaagctaaagccaaagctaagcaggtacaagaatctgtaaaggctggccaatca 837

                                                                        
Query: 736  atcgtaaagaagttctgggcaaggcttctgggtattggtccggctcttcgagctgttgct 795
            || |||   || |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 838  attgtacgaaaattctgggcgaggcttctgggtattggtcctgctctccgagctgttgct 897

                                                                        
Query: 796  tcaatgagcagagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttcc 855
            || |||||||||||||||||||||||||| ||||||||  |||| ||||||||| | || 
Sbjct: 898  tcgatgagcagagctgattgggctgcaaagctgaagcactggaaggatgaatttgtgtca 957

                                                                        
Query: 856  acactgcagcattactggctaggaacaaagctactctgggcagatgttaggatttcatca 915
            || ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 958  acgctgcagcattactggttagggacaaagctactctgggcagatgtgaggatttcgtca 1017

                                                                        
Query: 916  agattgctggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctc 975
            ||||| ||||||||||||||||||||||||| ||| |||||||||||||| || || || 
Sbjct: 1018 agattactggtgaaacttgctggtggaaagaacctttcaagaagagagagacaacaactg 1077

                                                                        
Query: 976  acccgtacaacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtccca 1035
            |||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |||
Sbjct: 1078 acccgtacaacagcagatatcttcaggctggtaccttttgctgtgttcatcattgttcca 1137

                                                                        
Query: 1036 ttcatggaattcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaact 1095
            |||||||| ||| |||| |||||||| || ||||| |||||||||||||| || ||||||
Sbjct: 1138 ttcatggagttcttacttccagtgttcctcaagttatttccaaatatgcttccctcaact 1197

                                                                        
Query: 1096 ttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaagcaaggatggag 1155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1198 ttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaagcaagaatggag 1257

                                                                        
Query: 1156 tatgcaaagtttctacaagatactgcaaaagaaatggcaaaggaagttcaaacatcacgt 1215
            ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1258 tatgccaagtttttgcaagatactgcaaaagaaatggcaaaggaagttcaaacatcacgt 1317

                                                                        
Query: 1216 agtggagaaacaaaacagacagctgaagatctggacgaatttttaaacaaggttaggaaa 1275
            |||||||||| |||||| ||||| |||||||| || |||||||| ||||||||||||| |
Sbjct: 1318 agtggagaaataaaacaaacagccgaagatcttgatgaatttttgaacaaggttaggaga 1377

                                                                        
Query: 1276 ggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagctttttaatgatgaattg 1335
            ||||||| ||| || |||||||||||||||| |||||||||||| |||||||||||  ||
Sbjct: 1378 ggtgaacatgtctcaaatgatgaaatcttgaacttcgcgaagctgtttaatgatgagctg 1437

                                                                        
Query: 1336 accttggataacatgagcagagcacgcttggtaaatatgtgcaaatatatgggtattcga 1395
            || |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 1438 actttggataacatgagcagaccacgcttggtaaacatgtgcaaatatatgggtattcga 1497

                                                                        
Query: 1396 ccttttggcacggatcattacttgaggttcatgcttcgcaaaaaactacgcgacattaag 1455
            ||||| || || || || ||||||||||||||||||||||||||||| |  |||||||||
Sbjct: 1498 cctttcggtactgaccactacttgaggttcatgcttcgcaaaaaactgcaagacattaag 1557

                                                                        
Query: 1456 aatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggagctccgg 1515
            ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| || |||
Sbjct: 1558 aatgacgataagatgattcaagctgagggtgttgagtctctctctgaagaggaacttcgg 1617

                                                                        
Query: 1516 caagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcgtaaacag 1575
            ||||| || ||||| || |||||||| ||| ||| ||||||||||||||||||  |||||
Sbjct: 1618 caagcctgtcgtgaacgtggtcacctaggtttgctgtcaacagaagaaatgcgccaacag 1677

                                                                        
Query: 1576 ctacgagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactt 1635
            || ||||| ||| |||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 1678 ctccgagattggttggatctctcacttaatcatgctgtgccatcctctcttctcatactt 1737

                                                                        
Query: 1636 tcaagagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttg 1695
            ||||||||||||||| |  |||||| |||||| || ||||| |||||||||||||| || 
Sbjct: 1738 tcaagagcttttaccgtatctgggaaaatgaagcctgaggaggctgttgtagcaacctta 1797

                                                                        
Query: 1696 tcttctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattca 1755
            |||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||| 
Sbjct: 1798 tcttctctaccagatgaagttgtggatacagttgggaccgtattgccatctgaagattcg 1857

                                                      
Query: 1756 gtttctgagaggaggagaaaactggaattccttgagatgcag 1797
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1858 gtttctgagaggaggagaaaactggaattccttgagatgcag 1899



 Score =  264 bits (133), Expect = 2e-66
 Identities = 283/333 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1889 aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaag 1948
            ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||
Sbjct: 1991 aggctgctgaagaagatttggctttgaaggaaatgactggtcctactgctagggaagaag 2050

                                                                        
Query: 1949 aagaactgactgacgcaaaacgacatgacaaggaacagctctgtaatatcagtcaagcat 2008
            |||||||||  || |||||||  || || |||||| ||||||||||| | |||| |||| 
Sbjct: 2051 aagaactgagagaagcaaaacagcacgataaggaaaagctctgtaattttagtcgagcac 2110

                                                                        
Query: 2009 tggctgtgctggcatctgcatcgtctgttagcaaggagcgtcaagagttcctgagccttg 2068
            ||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2111 tggctgtactggcatccgcatcgtctgttagcaaggagcgtcaagagttcctcagccttg 2170

                                                                        
Query: 2069 tcaacaaggagataaaactatataactccatgcttgaaagagaagacacagagggggcag 2128
            ||||||| |||||  |||| |||||||| ||||||||||  || |  ||||| || | ||
Sbjct: 2171 tcaacaaagagattgaactgtataactctatgcttgaaaaggagggtacagaaggtgaag 2230

                                                                        
Query: 2129 aagaagctaagaaggcatatatggctgttagaggggagtcagacgacaccacagaggttg 2188
            | ||||||||||| || || ||||||| |||||  ||||| ||| |  |  | |||||||
Sbjct: 2231 aggaagctaagaaagcttacatggctgctagagaagagtcggacaaggctgctgaggttg 2290

                                             
Query: 2189 cttcagaggaaaaggtctcgtcggcgctgattg 2221
             |  ||| ||||||||||| |||||||||||||
Sbjct: 2291 atgaagaagaaaaggtctcatcggcgctgattg 2323



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                       
Query: 158 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 217
           ||||| |||||||||||||| |  ||||| |||||| | |||||  ||  ||||| ||||
Sbjct: 260 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 319

                                                                     
Query: 218 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 275
           ||||  |||| || ||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 320 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 377



to top

>dbj|AK100424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088B16, full
            insert sequence
          Length = 2967

 Score = 1489 bits (751), Expect = 0.0
 Identities = 1208/1362 (88%), Gaps = 3/1362 (0%)
 Strand = Plus / Plus

                                                                        
Query: 439  gggcttctgcgacgtccagctcacgtgatttctcactatggttatggaattggaaggaat 498
            ||||||||||| || ||||| || | ||||||||    || |||||||||||||||||| 
Sbjct: 540  gggcttctgcggcgcccagcccatgggatttctctacctgcttatggaattggaaggaag 599

                                                                        
Query: 499  gaatttacattgcctttgggagctagaggtttgttgcagtcagttcgcaaagcatcaact 558
            ||||||   |||||| |||| ||||||  |||| |||||||||| |||| ||| ||||||
Sbjct: 600  gaatttgggttgcctatgggtgctagacatttgctgcagtcagtccgcacagcctcaact 659

                                                                        
Query: 559  gcaactgctgggcaacctaaattggatattgaaga---acagggtgataatcaaaaccag 615
            ||||| |||||||||||||| ||||||||||||||   |||| ||||  |||| || |||
Sbjct: 660  gcaacagctgggcaacctaagttggatattgaagatgaacagagtgaggatcagaaacag 719

                                                                        
Query: 616  aataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtggaagggctaagc 675
            || |||||       || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 720  aacaaaaggaaaaaggaggcatccccagaagaatgtgatcaggctgtggaaggcctaagc 779

                                                                        
Query: 676  acggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaaggctgaccagtca 735
            |  ||||||||||||||||||||||||||||| ||||| ||  ||||||||| ||| |||
Sbjct: 780  agtgcaaaagctaaagccaaagctaagcaggtacaagaatctgtaaaggctggccaatca 839

                                                                        
Query: 736  atcgtaaagaagttctgggcaaggcttctgggtattggtccggctcttcgagctgttgct 795
            || |||   || |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 840  attgtacgaaaattctgggcgaggcttctgggtattggtcctgctctccgagctgttgct 899

                                                                        
Query: 796  tcaatgagcagagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttcc 855
            || |||||||||||||||||||||||||| ||||||||  |||| ||||||||| | || 
Sbjct: 900  tcgatgagcagagctgattgggctgcaaagctgaagcactggaaggatgaatttgtgtca 959

                                                                        
Query: 856  acactgcagcattactggctaggaacaaagctactctgggcagatgttaggatttcatca 915
            || ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 960  acgctgcagcattactggttagggacaaagctactctgggcagatgtgaggatttcgtca 1019

                                                                        
Query: 916  agattgctggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctc 975
            ||||| ||||||||||||||||||||||||| ||| |||||||||||||| || || || 
Sbjct: 1020 agattactggtgaaacttgctggtggaaagaacctttcaagaagagagagacaacaactg 1079

                                                                        
Query: 976  acccgtacaacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtccca 1035
            |||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |||
Sbjct: 1080 acccgtacaacagcagatatcttcaggctggtaccttttgctgtgttcatcattgttcca 1139

                                                                        
Query: 1036 ttcatggaattcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaact 1095
            |||||||| ||| |||| |||||||| || ||||| |||||||||||||| || ||||||
Sbjct: 1140 ttcatggagttcttacttccagtgttcctcaagttatttccaaatatgcttccctcaact 1199

                                                                        
Query: 1096 ttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaagcaaggatggag 1155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1200 ttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaagcaagaatggag 1259

                                                                        
Query: 1156 tatgcaaagtttctacaagatactgcaaaagaaatggcaaaggaagttcaaacatcacgt 1215
            ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 tatgccaagtttttgcaagatactgcaaaagaaatggcaaaggaagttcaaacatcacgt 1319

                                                                        
Query: 1216 agtggagaaacaaaacagacagctgaagatctggacgaatttttaaacaaggttaggaaa 1275
            |||||||||| |||||| ||||| |||||||| || |||||||| ||||||||||||| |
Sbjct: 1320 agtggagaaataaaacaaacagccgaagatcttgatgaatttttgaacaaggttaggaga 1379

                                                                        
Query: 1276 ggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagctttttaatgatgaattg 1335
            ||||||| ||| || |||||||||||||||| |||||||||||| |||||||||||  ||
Sbjct: 1380 ggtgaacatgtctcaaatgatgaaatcttgaacttcgcgaagctgtttaatgatgagctg 1439

                                                                        
Query: 1336 accttggataacatgagcagagcacgcttggtaaatatgtgcaaatatatgggtattcga 1395
            || |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 1440 actttggataacatgagcagaccacgcttggtaaacatgtgcaaatatatgggtattcga 1499

                                                                        
Query: 1396 ccttttggcacggatcattacttgaggttcatgcttcgcaaaaaactacgcgacattaag 1455
            ||||| || || || || ||||||||||||||||||||||||||||| |  |||||||||
Sbjct: 1500 cctttcggtactgaccactacttgaggttcatgcttcgcaaaaaactgcaagacattaag 1559

                                                                        
Query: 1456 aatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggagctccgg 1515
            ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| || |||
Sbjct: 1560 aatgacgataagatgattcaagctgagggtgttgagtctctctctgaagaggaacttcgg 1619

                                                                        
Query: 1516 caagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcgtaaacag 1575
            ||||| || ||||| || |||||||| ||| ||| ||||||||||||||||||  |||||
Sbjct: 1620 caagcctgtcgtgaacgtggtcacctaggtttgctgtcaacagaagaaatgcgccaacag 1679

                                                                        
Query: 1576 ctacgagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactt 1635
            || ||||| ||| |||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 1680 ctccgagattggttggatctctcacttaatcatgctgtgccatcctctcttctcatactt 1739

                                                                        
Query: 1636 tcaagagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttg 1695
            ||||||||||||||| |  |||||| |||||| || ||||| |||||||||||||| || 
Sbjct: 1740 tcaagagcttttaccgtatctgggaaaatgaagcctgaggaggctgttgtagcaacctta 1799

                                                                        
Query: 1696 tcttctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattca 1755
            |||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||| 
Sbjct: 1800 tcttctctaccagatgaagttgtggatacagttgggaccgtattgccatctgaagattcg 1859

                                                      
Query: 1756 gtttctgagaggaggagaaaactggaattccttgagatgcag 1797
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 gtttctgagaggaggagaaaactggaattccttgagatgcag 1901



 Score =  513 bits (259), Expect = e-141
 Identities = 511/595 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1889 aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaag 1948
            ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||
Sbjct: 1993 aggctgctgaagaagatttggctttgaaggaaatgactggtcctactgctagggaagaag 2052

                                                                        
Query: 1949 aagaactgactgacgcaaaacgacatgacaaggaacagctctgtaatatcagtcaagcat 2008
            |||||||||  || |||||||  || || |||||| ||||||||||| | |||| |||| 
Sbjct: 2053 aagaactgagagaagcaaaacagcacgataaggaaaagctctgtaattttagtcgagcac 2112

                                                                        
Query: 2009 tggctgtgctggcatctgcatcgtctgttagcaaggagcgtcaagagttcctgagccttg 2068
            ||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2113 tggctgtactggcatccgcatcgtctgttagcaaggagcgtcaagagttcctcagccttg 2172

                                                                        
Query: 2069 tcaacaaggagataaaactatataactccatgcttgaaagagaagacacagagggggcag 2128
            ||||||| |||||  |||| |||||||| ||||||||||  || |  ||||| || | ||
Sbjct: 2173 tcaacaaagagattgaactgtataactctatgcttgaaaaggagggtacagaaggtgaag 2232

                                                                        
Query: 2129 aagaagctaagaaggcatatatggctgttagaggggagtcagacgacaccacagaggttg 2188
            | ||||||||||| || || ||||||| |||||  ||||| ||| |  |  | |||||||
Sbjct: 2233 aggaagctaagaaagcttacatggctgctagagaagagtcggacaaggctgctgaggttg 2292

                                                                        
Query: 2189 cttcagaggaaaaggtctcgtcggcgctgattgacaaggtggatgctatgcttcagggat 2248
             |  ||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||  ||
Sbjct: 2293 atgaagaagaaaaggtctcatcggcgctgattgagaaggttgatgctatgctccagaaat 2352

                                                                        
Query: 2249 tagaaaaggagattgatgatgtggatgcacaaatcggaaatcgctggcaactgcttgata 2308
            ||||||||||||||||||| |||||||||||||| ||||| || |||||| | |||||||
Sbjct: 2353 tagaaaaggagattgatgacgtggatgcacaaattggaaaccgatggcaaattcttgata 2412

                                                                        
Query: 2309 gggatcatgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaagg 2368
            |||||| ||||||||| |||||||||||||| |||||| | || ||||||||||| ||||
Sbjct: 2413 gggatcttgatggcaaggtgactcctgaggaggtagcgtcagcagcagcttatctgaagg 2472

                                                                        
Query: 2369 acaccatagggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaagaag 2428
            | || ||||| || |||||||||||||||||| ||||||| || |||||||||||||| |
Sbjct: 2473 atacaataggaaaggaaggcgtccaagagcttgtcagcaacctctctaaagacaaagatg 2532

                                                                   
Query: 2429 gaaagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
            | |||||||||||||| ||||| ||||||||||| || ||| | || ||||||||
Sbjct: 2533 ggaagatccgtgtggaagacattgtgaagctggcatcacaaacagatgaaaacaa 2587



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                       
Query: 158 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 217
           ||||| |||||||||||||| |  ||||| |||||| | |||||  ||  ||||| ||||
Sbjct: 262 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 321

                                                                     
Query: 218 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 275
           ||||  |||| || ||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 322 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 379



to top

>ref|NM_001059737.1| Oryza sativa (japonica cultivar-group) Os04g0496800 (Os04g0496800)
            mRNA, complete cds
          Length = 2791

 Score =  904 bits (456), Expect = 0.0
 Identities = 987/1164 (84%)
 Strand = Plus / Plus

                                                                        
Query: 634  gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
            |||||||||||||| ||||||||||| ||||||||  ||||||| |||||||||||||| 
Sbjct: 641  gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 700

                                                                        
Query: 694  aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
            |||||||||| |||||| ||    | |||| |||||||||||||| || | || || |||
Sbjct: 701  aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 760

                                                                        
Query: 754  gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcagagctgat 813
            ||||  ||||| |||||||| || ||||| || |||||||||||||||||||| ||||| 
Sbjct: 761  gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcagggctgac 820

                                                                        
Query: 814  tgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcattactgg 873
            |||||||||||| |||||||| |||| ||||| ||| |||| |||||||||||||| |||
Sbjct: 821  tgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcattattgg 880

                                                                        
Query: 874  ctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtgaaactt 933
             | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||||||||
Sbjct: 881  ttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtgaaactt 940

                                                                        
Query: 934  gctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaacagcagat 993
            |||||||||||||||||  |||||||||||||||| ||||| || || |||||||| |||
Sbjct: 941  gctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaacagctgat 1000

                                                                        
Query: 994  atcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattcctacta 1053
             | || ||||| |||||| |||||||||||||  |||| || |||||||||||  |||||
Sbjct: 1001 ttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaatttttacta 1060

                                                                        
Query: 1054 ccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaagatgaaa 1113
            ||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||||||| 
Sbjct: 1061 ccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaagatgaag 1120

                                                                        
Query: 1114 gaagaggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaa 1173
            |||||||| || |||||||||||| |||||||||||||||| |||||||  ||| |||||
Sbjct: 1121 gaagaggaggcattgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaa 1180

                                                                        
Query: 1174 gatactgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacag 1233
            ||||||||||||||||||||||||||||| || || ||||||||||||||||  ||||||
Sbjct: 1181 gatactgcaaaagaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacag 1240

                                                                        
Query: 1234 acagctgaagatctggacgaatttttaaacaaggttaggaaaggtgaacgtgtatccaat 1293
            ||||||||||||||||| |||||||| ||||||||||||||||||| || ||| || |||
Sbjct: 1241 acagctgaagatctggatgaatttttgaacaaggttaggaaaggtggacatgtctcaaat 1300

                                                                        
Query: 1294 gatgaaatcttgagcttcgcgaagctttttaatgatgaattgaccttggataacatgagc 1353
            || ||||| |||||||| || ||||| |||||||||||| |||| ||||||||||||| |
Sbjct: 1301 gaagaaattttgagctttgcaaagctgtttaatgatgaactgactttggataacatgaac 1360

                                                                        
Query: 1354 agagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatcat 1413
            |||||||| |||||||||||||| ||||||||||| || | ||||||||| || || || 
Sbjct: 1361 agagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagaccac 1420

                                                                        
Query: 1414 tacttgaggttcatgcttcgcaaaaaactacgcgacattaagaatgatgataaaatgatt 1473
            ||| |||  ||||||||||| || ||| | |  || ||||||||||||||||| ||||| 
Sbjct: 1421 tacctgacattcatgcttcggaagaaattgcaagaaattaagaatgatgataagatgatc 1480

                                                                        
Query: 1474 caagctgagggtgttgattctctttctgaagaggagctccggcaagcttgccgtgatcgc 1533
            || |||||||| || || ||||||||||| |||||||| || ||||| || || || || 
Sbjct: 1481 caggctgagggcgtggagtctctttctgaggaggagcttcgacaagcatgtcgagaacgt 1540

                                                                        
Query: 1534 ggtcaccttggtctgcggtcaacagaagaaatgcgtaaacagctacgagactggctggac 1593
            || || |||||| ||  ||||||||| || ||||  || |||||  |||||||| |||| 
Sbjct: 1541 ggccatcttggtttgttgtcaacagaggagatgcaaaatcagctcagagactggttggat 1600

                                                                        
Query: 1594 ctgtcacttaatcatgctgtgccatcttctcttctcatactttcaagagcttttaccctg 1653
             |||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||| ||
Sbjct: 1601 ttgtcacttaatcattctgtgccatcatctcttctaatactatcaagagcttttaccatg 1660

                                                                        
Query: 1654 gctgggagaatgaaacccgaggatgctgttgtagcaacgttgtcttctttgccagatgaa 1713
             |||||| |||||| |||||||| |||||||||||||| || |||||| | |||||||||
Sbjct: 1661 tctgggaaaatgaagcccgaggaggctgttgtagcaacattatcttctcttccagatgaa 1720

                                                                        
Query: 1714 gttgtggatacaattgggacagtattgccatctgaagattcagtttctgagaggaggaga 1773
            ||||| |||||  ||||||||||  | || || |||||||| || || || |||| | | 
Sbjct: 1721 gttgtagatactgttgggacagttcttccttcagaagattctgtgtccgacaggaagcgg 1780

                                    
Query: 1774 aaactggaattccttgagatgcag 1797
            ||| |||||||||| || ||||||
Sbjct: 1781 aaattggaattcctggaaatgcag 1804



 Score =  192 bits (97), Expect = 5e-45
 Identities = 199/233 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2230 gatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcggaaat 2289
            ||||| |||||||||  |||||| || |||||||||||||| ||||||| ||| || || 
Sbjct: 2219 gatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaataggcaac 2278

                                                                        
Query: 2290 cgctggcaactgcttgatagggatcatgatggcaaagtgactcctgaggaagtagcggcg 2349
            |||||||| ||||||||||| || | |||||||||||| || ||||| || ||||| || 
Sbjct: 2279 cgctggcagctgcttgatagtgaccgtgatggcaaagttacccctgacgaggtagcagct 2338

                                                                        
Query: 2350 gccgcagcttatctcaaggacaccatagggaaagaaggcgtccaagagcttatcagcaag 2409
            || |||  ||||||||| ||||| |||||||| |||||||||||||||||||| ||||| 
Sbjct: 2339 gcagcaaattatctcaaagacactatagggaaggaaggcgtccaagagcttattagcaat 2398

                                                                 
Query: 2410 ctttctaaagacaaagaaggaaagatccgtgtggaggacatcgtgaagctggc 2462
            ||||||||||||||||| ||||||||||  || || ||||| |||||||||||
Sbjct: 2399 ctttctaaagacaaagatggaaagatcctcgttgaagacattgtgaagctggc 2451



 Score =  107 bits (54), Expect = 2e-19
 Identities = 111/130 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1978 aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgcatcgtctgtt 2037
            ||||| ||||| ||| ||||||| ||||||||||| ||||| |||||||| || ||||||
Sbjct: 1967 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgcttcttctgtt 2026

                                                                        
Query: 2038 agcaaggagcgtcaagagttcctgagccttgtcaacaaggagataaaactatataactcc 2097
              |||||| ||||||||||| ||||  |||||||| || |||||| ||||||||||| ||
Sbjct: 2027 gccaaggaacgtcaagagtttctgaatcttgtcaataaagagatagaactatataacacc 2086

                      
Query: 2098 atgcttgaaa 2107
            ||||| ||||
Sbjct: 2087 atgctggaaa 2096



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                 
Query: 1895 ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
            ||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1878 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 1930



 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 197 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
           |||||||||  ||||| || ||||| |||||||||||||| ||||||
Sbjct: 228 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 274



to top

>dbj|AK068782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159H18, full
            insert sequence
          Length = 2792

 Score =  904 bits (456), Expect = 0.0
 Identities = 987/1164 (84%)
 Strand = Plus / Plus

                                                                        
Query: 634  gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
            |||||||||||||| ||||||||||| ||||||||  ||||||| |||||||||||||| 
Sbjct: 642  gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 701

                                                                        
Query: 694  aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
            |||||||||| |||||| ||    | |||| |||||||||||||| || | || || |||
Sbjct: 702  aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 761

                                                                        
Query: 754  gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcagagctgat 813
            ||||  ||||| |||||||| || ||||| || |||||||||||||||||||| ||||| 
Sbjct: 762  gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcagggctgac 821

                                                                        
Query: 814  tgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcattactgg 873
            |||||||||||| |||||||| |||| ||||| ||| |||| |||||||||||||| |||
Sbjct: 822  tgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcattattgg 881

                                                                        
Query: 874  ctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtgaaactt 933
             | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||||||||
Sbjct: 882  ttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtgaaactt 941

                                                                        
Query: 934  gctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaacagcagat 993
            |||||||||||||||||  |||||||||||||||| ||||| || || |||||||| |||
Sbjct: 942  gctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaacagctgat 1001

                                                                        
Query: 994  atcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattcctacta 1053
             | || ||||| |||||| |||||||||||||  |||| || |||||||||||  |||||
Sbjct: 1002 ttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaatttttacta 1061

                                                                        
Query: 1054 ccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaagatgaaa 1113
            ||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||||||| 
Sbjct: 1062 ccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaagatgaag 1121

                                                                        
Query: 1114 gaagaggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaa 1173
            |||||||| || |||||||||||| |||||||||||||||| |||||||  ||| |||||
Sbjct: 1122 gaagaggaggcattgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaa 1181

                                                                        
Query: 1174 gatactgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacag 1233
            ||||||||||||||||||||||||||||| || || ||||||||||||||||  ||||||
Sbjct: 1182 gatactgcaaaagaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacag 1241

                                                                        
Query: 1234 acagctgaagatctggacgaatttttaaacaaggttaggaaaggtgaacgtgtatccaat 1293
            ||||||||||||||||| |||||||| ||||||||||||||||||| || ||| || |||
Sbjct: 1242 acagctgaagatctggatgaatttttgaacaaggttaggaaaggtggacatgtctcaaat 1301

                                                                        
Query: 1294 gatgaaatcttgagcttcgcgaagctttttaatgatgaattgaccttggataacatgagc 1353
            || ||||| |||||||| || ||||| |||||||||||| |||| ||||||||||||| |
Sbjct: 1302 gaagaaattttgagctttgcaaagctgtttaatgatgaactgactttggataacatgaac 1361

                                                                        
Query: 1354 agagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatcat 1413
            |||||||| |||||||||||||| ||||||||||| || | ||||||||| || || || 
Sbjct: 1362 agagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagaccac 1421

                                                                        
Query: 1414 tacttgaggttcatgcttcgcaaaaaactacgcgacattaagaatgatgataaaatgatt 1473
            ||| |||  ||||||||||| || ||| | |  || ||||||||||||||||| ||||| 
Sbjct: 1422 tacctgacattcatgcttcggaagaaattgcaagaaattaagaatgatgataagatgatc 1481

                                                                        
Query: 1474 caagctgagggtgttgattctctttctgaagaggagctccggcaagcttgccgtgatcgc 1533
            || |||||||| || || ||||||||||| |||||||| || ||||| || || || || 
Sbjct: 1482 caggctgagggcgtggagtctctttctgaggaggagcttcgacaagcatgtcgagaacgt 1541

                                                                        
Query: 1534 ggtcaccttggtctgcggtcaacagaagaaatgcgtaaacagctacgagactggctggac 1593
            || || |||||| ||  ||||||||| || ||||  || |||||  |||||||| |||| 
Sbjct: 1542 ggccatcttggtttgttgtcaacagaggagatgcaaaatcagctcagagactggttggat 1601

                                                                        
Query: 1594 ctgtcacttaatcatgctgtgccatcttctcttctcatactttcaagagcttttaccctg 1653
             |||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||| ||
Sbjct: 1602 ttgtcacttaatcattctgtgccatcatctcttctaatactatcaagagcttttaccatg 1661

                                                                        
Query: 1654 gctgggagaatgaaacccgaggatgctgttgtagcaacgttgtcttctttgccagatgaa 1713
             |||||| |||||| |||||||| |||||||||||||| || |||||| | |||||||||
Sbjct: 1662 tctgggaaaatgaagcccgaggaggctgttgtagcaacattatcttctcttccagatgaa 1721

                                                                        
Query: 1714 gttgtggatacaattgggacagtattgccatctgaagattcagtttctgagaggaggaga 1773
            ||||| |||||  ||||||||||  | || || |||||||| || || || |||| | | 
Sbjct: 1722 gttgtagatactgttgggacagttcttccttcagaagattctgtgtccgacaggaagcgg 1781

                                    
Query: 1774 aaactggaattccttgagatgcag 1797
            ||| |||||||||| || ||||||
Sbjct: 1782 aaattggaattcctggaaatgcag 1805



 Score =  184 bits (93), Expect = 1e-42
 Identities = 198/233 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2230 gatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcggaaat 2289
            ||||| |||||||||  |||||| || ||||| |||||||| ||||||| ||| || || 
Sbjct: 2220 gatgcaatgcttcagaaattagagaaagagatagatgatgttgatgcacgaataggcaac 2279

                                                                        
Query: 2290 cgctggcaactgcttgatagggatcatgatggcaaagtgactcctgaggaagtagcggcg 2349
            |||||||| ||||||||||| || | |||||||||||| || ||||| || ||||| || 
Sbjct: 2280 cgctggcagctgcttgatagtgaccgtgatggcaaagttacccctgacgaggtagcagct 2339

                                                                        
Query: 2350 gccgcagcttatctcaaggacaccatagggaaagaaggcgtccaagagcttatcagcaag 2409
            || |||  ||||||||| ||||| |||||||| |||||||||||||||||||| ||||| 
Sbjct: 2340 gcagcaaattatctcaaagacactatagggaaggaaggcgtccaagagcttattagcaat 2399

                                                                 
Query: 2410 ctttctaaagacaaagaaggaaagatccgtgtggaggacatcgtgaagctggc 2462
            ||||||||||||||||| ||||||||||  || || ||||| |||||||||||
Sbjct: 2400 ctttctaaagacaaagatggaaagatcctcgttgaagacattgtgaagctggc 2452



 Score =  107 bits (54), Expect = 2e-19
 Identities = 111/130 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1978 aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgcatcgtctgtt 2037
            ||||| ||||| ||| ||||||| ||||||||||| ||||| |||||||| || ||||||
Sbjct: 1968 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgcttcttctgtt 2027

                                                                        
Query: 2038 agcaaggagcgtcaagagttcctgagccttgtcaacaaggagataaaactatataactcc 2097
              |||||| ||||||||||| ||||  |||||||| || |||||| ||||||||||| ||
Sbjct: 2028 gccaaggaacgtcaagagtttctgaatcttgtcaataaagagatagaactatataacacc 2087

                      
Query: 2098 atgcttgaaa 2107
            ||||| ||||
Sbjct: 2088 atgctggaaa 2097



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                 
Query: 1895 ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
            ||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1879 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 1931



 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 197 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
           |||||||||  ||||| || ||||| |||||||||||||| ||||||
Sbjct: 229 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 275



to top

>gb|AY108574.2| Zea mays PCO113050 mRNA sequence
          Length = 599

 Score =  607 bits (306), Expect = e-170
 Identities = 507/574 (88%)
 Strand = Plus / Plus

                                                                        
Query: 778  gctcttcgagctgttgcttcaatgagcagagctgattgggctgcaaaactgaagcatggg 837
            |||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||| ||
Sbjct: 24   gctcttcgtgctgttgcttcaatgagcagggctgattgggcagcaaaacttaagcattgg 83

                                                                        
Query: 838  aaagatgaatttatttccacactgcagcattactggctaggaacaaagctactctgggca 897
            || ||||||||  |||  |||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 84   aaggatgaattcgtttgtacactgcagcattactggttagggacaaaactactctgggca 143

                                                                        
Query: 898  gatgttaggatttcatcaagattgctggtgaaacttgctggtggaaagagcctctcaaga 957
            ||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 144  gatgttaggatctcatcaagattgctggtgaaacttgctggggggaagagcctttcaaga 203

                                                                        
Query: 958  agagagaggcagcagctcacccgtacaacagcagatatcttcaggctggtacctgttgct 1017
            ||||||||||| ||||| || || |||||||||||||||||||||||||| ||  |||||
Sbjct: 204  agagagaggcaacagctgacacgcacaacagcagatatcttcaggctggttccgtttgct 263

                                                                        
Query: 1018 gtgttcattgttgtcccattcatggaattcctactaccagtgtttcttaagttgtttcca 1077
            ||||||||  |||| ||||||||||||||| |||| ||||| || || ||||| ||||||
Sbjct: 264  gtgttcatcattgttccattcatggaattcttactgccagtcttcctcaagttatttcca 323

                                                                        
Query: 1078 aatatgctgccatcaactttccaagacaagatgaaagaagaggaagcgttgaaaaggaaa 1137
            || ||||| |||||||||||||| ||||| ||||| ||||||||||| || |||||||||
Sbjct: 324  aacatgcttccatcaactttccaggacaaaatgaaggaagaggaagcattaaaaaggaaa 383

                                                                        
Query: 1138 ctgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaagaaatggcaaag 1197
             ||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||
Sbjct: 384  ttgaaagcaaggatggagtatgcaaaatttttgcaagataccgcaaaagaaatggcaaag 443

                                                                        
Query: 1198 gaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagatctggacgaattt 1257
            |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 444  gaagttcaaacatctcgtagcggagaaacaaaacaaacagctgaagatctggacgaattt 503

                                                                        
Query: 1258 ttaaacaaggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaag 1317
            || || ||||||| || | ||| |||||| || ||||||||||||||||  || || |||
Sbjct: 504  ttgaataaggttacgagaagtggacgtgtctctaatgatgaaatcttgaattttgcaaag 563

                                              
Query: 1318 ctttttaatgatgaattgaccttggataacatga 1351
            || ||  |||||||| | ||  ||||||||||||
Sbjct: 564  ctattccatgatgaacttactctggataacatga 597



to top

>gb|AY110168.1| Zea mays CL28548_1 mRNA sequence
          Length = 1716

 Score =  462 bits (233), Expect = e-126
 Identities = 447/522 (85%)
 Strand = Plus / Minus

                                                                        
Query: 1239 tgaagatctggacgaatttttaaacaaggttaggaaaggtgaacgtgtatccaatgatga 1298
            ||||||||||||||||      || |||||||||| ||||| |||||| || ||||||||
Sbjct: 1716 tgaagatctggacgaannnnngaataaggttaggagaggtggacgtgtctctaatgatga 1657

                                                                        
Query: 1299 aatcttgagcttcgcgaagctttttaatgatgaattgaccttggataacatgagcagagc 1358
            ||||||||  || || ||||| || ||||||||| | ||  |||||||||||| |||| |
Sbjct: 1656 aatcttgaattttgcaaagctattcaatgatgaacttactctggataacatgaacagacc 1597

                                                                        
Query: 1359 acgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatcattactt 1418
             |||||||||||||||||||||||||||||||| || |||||||| || ||||| ||| |
Sbjct: 1596 ccgcttggtaaatatgtgcaaatatatgggtatccggccttttggtacagatcactacat 1537

                                                                        
Query: 1419 gaggttcatgcttcgcaaaaaactacgcgacattaagaatgatgataaaatgattcaagc 1478
            ||||||||||||||||      || |  ||||||||||||||||||||| ||||||||||
Sbjct: 1536 gaggttcatgcttcgcnnnnnncttcaggacattaagaatgatgataaactgattcaagc 1477

                                                                        
Query: 1479 tgagggtgttgattctctttctgaagaggagctccggcaagcttgccgtgatcgcggtca 1538
            |||||| ||||| ||||| |||||||| |||||||||||||| ||||| || || |||||
Sbjct: 1476 tgagggagttgaatctctctctgaagaagagctccggcaagcctgccgggaacgtggtca 1417

                                                                        
Query: 1539 ccttggtctgcggtcaacagaagaaatgcgtaaacagctacgagactggctggacctgtc 1598
             || || |||| |||||| ||||| ||| |  | ||||| ||||||||| ||||||| ||
Sbjct: 1416 tctaggcctgctgtcaactgaagagatgtgccagcagctccgagactggttggacctatc 1357

                                                                        
Query: 1599 acttaatcatgctgtgccatcttctcttctcatactttcaagagcttttaccctggctgg 1658
             ||||||||||||||||||||||| |||||||||||||||||||| |||||  || ||||
Sbjct: 1356 ccttaatcatgctgtgccatcttcacttctcatactttcaagagcctttactgtgtctgg 1297

                                                                        
Query: 1659 gagaatgaaacccgaggatgctgttgtagcaacgttgtcttctttgccagatgaagttgt 1718
            ||||||||| || ||||| ||||||||||||||  | |||||||| ||||| ||||||||
Sbjct: 1296 gagaatgaagccagaggaggctgttgtagcaaccctatcttctttaccagacgaagttgt 1237

                                                      
Query: 1719 ggatacaattgggacagtattgccatctgaagattcagtttc 1760
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 ggatacaattgggacagtattgccatctgaagattcagtttc 1195



 Score =  151 bits (76), Expect = 2e-32
 Identities = 112/124 (90%)
 Strand = Plus / Minus

                                                                        
Query: 2182 gaggttgcttcagaggaaaaggtctcgtcggcgctgattgacaaggtggatgctatgctt 2241
            |||| |||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||||
Sbjct: 783  gaggctgctgcagaagaaaaggtctcgtcggcgttgattgagaaggttgatgctatgctt 724

                                                                        
Query: 2242 cagggattagaaaaggagattgatgatgtggatgcacaaatcggaaatcgctggcaactg 2301
            || | |||||||||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 723  caagaattagaaaaggagattgatgatgtggatgcacaaattggaaaccgttggcagctg 664

                
Query: 2302 cttg 2305
            ||||
Sbjct: 663  cttg 660



 Score =  125 bits (63), Expect = 1e-24
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1986 gctctgtaatatcagtcaagcattggctgtgctggcatctgcatcgtctgttagcaagga 2045
            ||||||||||||||| |  || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 978  gctctgtaatatcagccgtgccttggctgtgctcgcatctgcatcttctgttagcaagga 919

                                                               
Query: 2046 gcgtcaagagttcctgagccttgtcaacaaggagataaaactatataactc 2096
            |||||||||||| |||||||| ||||| || |||||| | |||||||||||
Sbjct: 918  gcgtcaagagtttctgagcctcgtcaataaagagatagagctatataactc 868



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                        
Query: 2359 tatctcaaggacaccatagggaaagaaggcgtccaagagcttatcagcaagctttctaaa 2418
            ||||| ||||||||||| ||||| |||||||| |||||||| |||| ||| ||||| || 
Sbjct: 606  tatctgaaggacaccatcgggaaggaaggcgtgcaagagctcatcaccaacctttcgaag 547

                                                 
Query: 2419 gacaaagaaggaaagatccgtgtggaggacatcgtga 2455
            |||| ||||||||||||||  ||||| || |||||||
Sbjct: 546  gacacagaaggaaagatcctcgtggaagatatcgtga 510



 Score = 79.8 bits (40), Expect = 5e-11
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                    
Query: 1892 ctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
            |||||||||||||||| ||||| ||||||||||||||  |||||||||||||||||
Sbjct: 1066 ctgctgaagaagatttagctttgaaggaaatgactgatgctactgctagggaagaa 1011



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  383 bits (193), Expect = e-102
 Identities = 286/317 (90%)
 Strand = Plus / Minus

                                                                            
Query: 804      cagagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgca 863
                ||||||||||||||||||||| ||||||||  |||| ||||||||| | || || |||||
Sbjct: 23892476 cagagctgattgggctgcaaagctgaagcactggaaggatgaatttgtgtcaacgctgca 23892417

                                                                            
Query: 864      gcattactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgct 923
                |||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 23892416 gcattactggttagggacaaagctactctgggcagatgtgaggatttcgtcaagattact 23892357

                                                                            
Query: 924      ggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtac 983
                ||||||||||||||||||||||| ||| |||||||||||||| || || || ||||||||
Sbjct: 23892356 ggtgaaacttgctggtggaaagaacctttcaagaagagagagacaacaactgacccgtac 23892297

                                                                            
Query: 984      aacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatgga 1043
                |||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||
Sbjct: 23892296 aacagcagatatcttcaggctggtaccttttgctgtgttcatcattgttccattcatgga 23892237

                                                                            
Query: 1044     attcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaaga 1103
                 ||| |||| |||||||| || ||||| |||||||||||||| || ||||||||||||||
Sbjct: 23892236 gttcttacttccagtgttcctcaagttatttccaaatatgcttccctcaactttccaaga 23892177

                                 
Query: 1104     caagatgaaagaagagg 1120
                |||||||||||||||||
Sbjct: 23892176 caagatgaaagaagagg 23892160



 Score =  278 bits (140), Expect = 1e-70
 Identities = 312/371 (84%), Gaps = 3/371 (0%)
 Strand = Plus / Minus

                                                                            
Query: 439      gggcttctgcgacgtccagctcacgtgatttctcactatggttatggaattggaaggaat 498
                ||||||||||| || ||||| || | ||||||||    || |||||||||||||||||| 
Sbjct: 23892950 gggcttctgcggcgcccagcccatgggatttctctacctgcttatggaattggaaggaag 23892891

                                                                            
Query: 499      gaatttacattgcctttgggagctagaggtttgttgcagtcagttcgcaaagcatcaact 558
                ||||||   |||||| |||| ||||||  |||| |||||||||| |||| ||| ||||||
Sbjct: 23892890 gaatttgggttgcctatgggtgctagacatttgctgcagtcagtccgcacagcctcaact 23892831

                                                                            
Query: 559      gcaactgctgggcaacctaaattggatattgaaga---acagggtgataatcaaaaccag 615
                ||||| |||||||||||||| ||||||||||||||   |||| ||||  |||| || |||
Sbjct: 23892830 gcaacagctgggcaacctaagttggatattgaagatgaacagagtgaggatcagaaacag 23892771

                                                                            
Query: 616      aataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtggaagggctaagc 675
                || |||||       || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23892770 aacaaaaggaaaaaggaggcatccccagaagaatgtgatcaggctgtggaaggcctaagc 23892711

                                                                            
Query: 676      acggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaaggctgaccagtca 735
                |  ||||||||||||||||||||||||||||| ||||| ||  ||||||||| ||| |||
Sbjct: 23892710 agtgcaaaagctaaagccaaagctaagcaggtacaagaatctgtaaaggctggccaatca 23892651

                                                                            
Query: 736      atcgtaaagaagttctgggcaaggcttctgggtattggtccggctcttcgagctgttgct 795
                || |||   || |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 23892650 attgtacgaaaattctgggcgaggcttctgggtattggtcctgctctccgagctgttgct 23892591

                           
Query: 796      tcaatgagcag 806
                || ||||||||
Sbjct: 23892590 tcgatgagcag 23892580



 Score =  220 bits (111), Expect = 2e-53
 Identities = 141/151 (93%)
 Strand = Plus / Minus

                                                                            
Query: 1118     aggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagata 1177
                ||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||
Sbjct: 23891870 aggaagcgttgaaaaggaaactgaaagcaagaatggagtatgccaagtttttgcaagata 23891811

                                                                            
Query: 1178     ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacag 1237
                |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 23891810 ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaataaaacaaacag 23891751

                                               
Query: 1238     ctgaagatctggacgaatttttaaacaaggt 1268
                | |||||||| || |||||||| ||||||||
Sbjct: 23891750 ccgaagatcttgatgaatttttgaacaaggt 23891720



 Score =  204 bits (103), Expect = 1e-48
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1639     agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
                |||||||||||| |  |||||| |||||| || ||||| |||||||||||||| || |||
Sbjct: 23889543 agagcttttaccgtatctgggaaaatgaagcctgaggaggctgttgtagcaaccttatct 23889484

                                                                            
Query: 1699     tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
                ||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 23889483 tctctaccagatgaagttgtggatacagttgggaccgtattgccatctgaagattcggtt 23889424

                                                       
Query: 1759     tctgagaggaggagaaaactggaattccttgagatgcag 1797
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 23889423 tctgagaggaggagaaaactggaattccttgagatgcag 23889385



 Score =  149 bits (75), Expect = 7e-32
 Identities = 126/143 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1889     aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaag 1948
                ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||
Sbjct: 23888308 aggctgctgaagaagatttggctttgaaggaaatgactggtcctactgctagggaagaag 23888249

                                                                            
Query: 1949     aagaactgactgacgcaaaacgacatgacaaggaacagctctgtaatatcagtcaagcat 2008
                |||||||||  || |||||||  || || |||||| ||||||||||| | |||| |||| 
Sbjct: 23888248 aagaactgagagaagcaaaacagcacgataaggaaaagctctgtaattttagtcgagcac 23888189

                                       
Query: 2009     tggctgtgctggcatctgcatcg 2031
                ||||||| |||||||| ||||||
Sbjct: 23888188 tggctgtactggcatccgcatcg 23888166



 Score =  135 bits (68), Expect = 1e-27
 Identities = 107/120 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1449     cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagagga 1508
                |||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 23890512 cattaagaatgacgataagatgattcaagctgagggtgttgagtctctctctgaagagga 23890453

                                                                            
Query: 1509     gctccggcaagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcg 1568
                 || |||||||| || ||||| || |||||||| ||| ||| ||||||||||||||||||
Sbjct: 23890452 acttcggcaagcctgtcgtgaacgtggtcacctaggtttgctgtcaacagaagaaatgcg 23890393



 Score =  125 bits (63), Expect = 1e-24
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                            
Query: 1352     gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
                ||||| ||||||||||||| ||||||||||||||||||||||||||||| || || || |
Sbjct: 23891454 gcagaccacgcttggtaaacatgtgcaaatatatgggtattcgacctttcggtactgacc 23891395

                                               
Query: 1412     attacttgaggttcatgcttcgcaaaaaact 1442
                | |||||||||||||||||||||||||||||
Sbjct: 23891394 actacttgaggttcatgcttcgcaaaaaact 23891364



 Score =  123 bits (62), Expect = 4e-24
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                            
Query: 2308     agggatcatgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaag 2367
                ||||||| ||||||||| |||||||||||||| |||||| | || ||||||||||| |||
Sbjct: 23886573 agggatcttgatggcaaggtgactcctgaggaggtagcgtcagcagcagcttatctgaag 23886514

                                                                          
Query: 2368     gacaccatagggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
                || || ||||| || |||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 23886513 gatacaataggaaaggaaggcgtccaagagcttgtcagcaacctctctaaagacaaag 23886456



 Score =  109 bits (55), Expect = 6e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1265     aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
                ||||||||| |||||||| ||| || |||||||||||||||| |||||||||||| ||||
Sbjct: 23891631 aggttaggagaggtgaacatgtctcaaatgatgaaatcttgaacttcgcgaagctgttta 23891572

                                               
Query: 1325     atgatgaattgaccttggataacatgagcag 1355
                |||||||  |||| |||||||||||||||||
Sbjct: 23891571 atgatgagctgactttggataacatgagcag 23891541



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 2225     aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
                |||| ||||||||||| |||  ||||||||||||||||||||| |||||||||||||| |
Sbjct: 23887129 aggttgatgctatgctccagaaattagaaaaggagattgatgacgtggatgcacaaattg 23887070

                                          
Query: 2285     gaaatcgctggcaactgcttgatagg 2310
                |||| || |||||| | |||||||||
Sbjct: 23887069 gaaaccgatggcaaattcttgatagg 23887044



 Score = 87.7 bits (44), Expect = 2e-13
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1573     cagctacgagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcata 1632
                ||||| ||||| ||| |||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 23889703 cagctccgagattggttggatctctcacttaatcatgctgtgccatcctctcttctcata 23889644

                        
Query: 1633     ctttcaag 1640
                ||||||||
Sbjct: 23889643 ctttcaag 23889636



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                            
Query: 158      aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 217
                ||||| |||||||||||||| |  ||||| |||||| | |||||  ||  ||||| ||||
Sbjct: 23893228 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 23893169

                                                                          
Query: 218      gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 275
                ||||  |||| || ||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 23893168 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 23893111



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                             
Query: 2031     gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
                |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 23887994 gtctgttagcaaggagcgtcaagagttcctcagccttgtcaacaa 23887950



 Score = 50.1 bits (25), Expect = 0.046
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 2431     aagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
                |||||||||||||| ||||| ||||||||||| || ||| | || ||||||||
Sbjct: 23886352 aagatccgtgtggaagacattgtgaagctggcatcacaaacagatgaaaacaa 23886300



 Score = 50.1 bits (25), Expect = 0.046
 Identities = 115/145 (79%)
 Strand = Plus / Minus

                                                                            
Query: 2084     aactatataactccatgcttgaaagagaagacacagagggggcagaagaagctaagaagg 2143
                |||| |||||||| ||||||||||  || |  ||||| || | ||| ||||||||||| |
Sbjct: 23887825 aactgtataactctatgcttgaaaaggagggtacagaaggtgaagaggaagctaagaaag 23887766

                                                                            
Query: 2144     catatatggctgttagaggggagtcagacgacaccacagaggttgcttcagaggaaaagg 2203
                | || ||||||| |||||  ||||| ||| |  |  | ||||||| |  ||| |||||||
Sbjct: 23887765 cttacatggctgctagagaagagtcggacaaggctgctgaggttgatgaagaagaaaagg 23887706

                                         
Query: 2204     tctcgtcggcgctgattgacaaggt 2228
                |||| |||||||||||||| |||||
Sbjct: 23887705 tctcatcggcgctgattgagaaggt 23887681



to top

>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0030C08
          Length = 163423

 Score =  383 bits (193), Expect = e-102
 Identities = 286/317 (90%)
 Strand = Plus / Minus

                                                                          
Query: 804    cagagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgca 863
              ||||||||||||||||||||| ||||||||  |||| ||||||||| | || || |||||
Sbjct: 114142 cagagctgattgggctgcaaagctgaagcactggaaggatgaatttgtgtcaacgctgca 114083

                                                                          
Query: 864    gcattactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgct 923
              |||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 114082 gcattactggttagggacaaagctactctgggcagatgtgaggatttcgtcaagattact 114023

                                                                          
Query: 924    ggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtac 983
              ||||||||||||||||||||||| ||| |||||||||||||| || || || ||||||||
Sbjct: 114022 ggtgaaacttgctggtggaaagaacctttcaagaagagagagacaacaactgacccgtac 113963

                                                                          
Query: 984    aacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatgga 1043
              |||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||
Sbjct: 113962 aacagcagatatcttcaggctggtaccttttgctgtgttcatcattgttccattcatgga 113903

                                                                          
Query: 1044   attcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaaga 1103
               ||| |||| |||||||| || ||||| |||||||||||||| || ||||||||||||||
Sbjct: 113902 gttcttacttccagtgttcctcaagttatttccaaatatgcttccctcaactttccaaga 113843

                               
Query: 1104   caagatgaaagaagagg 1120
              |||||||||||||||||
Sbjct: 113842 caagatgaaagaagagg 113826



 Score =  278 bits (140), Expect = 1e-70
 Identities = 312/371 (84%), Gaps = 3/371 (0%)
 Strand = Plus / Minus

                                                                          
Query: 439    gggcttctgcgacgtccagctcacgtgatttctcactatggttatggaattggaaggaat 498
              ||||||||||| || ||||| || | ||||||||    || |||||||||||||||||| 
Sbjct: 114616 gggcttctgcggcgcccagcccatgggatttctctacctgcttatggaattggaaggaag 114557

                                                                          
Query: 499    gaatttacattgcctttgggagctagaggtttgttgcagtcagttcgcaaagcatcaact 558
              ||||||   |||||| |||| ||||||  |||| |||||||||| |||| ||| ||||||
Sbjct: 114556 gaatttgggttgcctatgggtgctagacatttgctgcagtcagtccgcacagcctcaact 114497

                                                                          
Query: 559    gcaactgctgggcaacctaaattggatattgaaga---acagggtgataatcaaaaccag 615
              ||||| |||||||||||||| ||||||||||||||   |||| ||||  |||| || |||
Sbjct: 114496 gcaacagctgggcaacctaagttggatattgaagatgaacagagtgaggatcagaaacag 114437

                                                                          
Query: 616    aataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtggaagggctaagc 675
              || |||||       || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 114436 aacaaaaggaaaaaggaggcatccccagaagaatgtgatcaggctgtggaaggcctaagc 114377

                                                                          
Query: 676    acggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaaggctgaccagtca 735
              |  ||||||||||||||||||||||||||||| ||||| ||  ||||||||| ||| |||
Sbjct: 114376 agtgcaaaagctaaagccaaagctaagcaggtacaagaatctgtaaaggctggccaatca 114317

                                                                          
Query: 736    atcgtaaagaagttctgggcaaggcttctgggtattggtccggctcttcgagctgttgct 795
              || |||   || |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 114316 attgtacgaaaattctgggcgaggcttctgggtattggtcctgctctccgagctgttgct 114257

                         
Query: 796    tcaatgagcag 806
              || ||||||||
Sbjct: 114256 tcgatgagcag 114246



 Score =  220 bits (111), Expect = 2e-53
 Identities = 141/151 (93%)
 Strand = Plus / Minus

                                                                          
Query: 1118   aggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagata 1177
              ||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||
Sbjct: 113536 aggaagcgttgaaaaggaaactgaaagcaagaatggagtatgccaagtttttgcaagata 113477

                                                                          
Query: 1178   ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacag 1237
              |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 113476 ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaataaaacaaacag 113417

                                             
Query: 1238   ctgaagatctggacgaatttttaaacaaggt 1268
              | |||||||| || |||||||| ||||||||
Sbjct: 113416 ccgaagatcttgatgaatttttgaacaaggt 113386



 Score =  204 bits (103), Expect = 1e-48
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                          
Query: 1639   agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
              |||||||||||| |  |||||| |||||| || ||||| |||||||||||||| || |||
Sbjct: 111209 agagcttttaccgtatctgggaaaatgaagcctgaggaggctgttgtagcaaccttatct 111150

                                                                          
Query: 1699   tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
              ||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 111149 tctctaccagatgaagttgtggatacagttgggaccgtattgccatctgaagattcggtt 111090

                                                     
Query: 1759   tctgagaggaggagaaaactggaattccttgagatgcag 1797
              |||||||||||||||||||||||||||||||||||||||
Sbjct: 111089 tctgagaggaggagaaaactggaattccttgagatgcag 111051



 Score =  149 bits (75), Expect = 7e-32
 Identities = 126/143 (88%)
 Strand = Plus / Minus

                                                                          
Query: 1889   aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaag 1948
              ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||
Sbjct: 109974 aggctgctgaagaagatttggctttgaaggaaatgactggtcctactgctagggaagaag 109915

                                                                          
Query: 1949   aagaactgactgacgcaaaacgacatgacaaggaacagctctgtaatatcagtcaagcat 2008
              |||||||||  || |||||||  || || |||||| ||||||||||| | |||| |||| 
Sbjct: 109914 aagaactgagagaagcaaaacagcacgataaggaaaagctctgtaattttagtcgagcac 109855

                                     
Query: 2009   tggctgtgctggcatctgcatcg 2031
              ||||||| |||||||| ||||||
Sbjct: 109854 tggctgtactggcatccgcatcg 109832



 Score =  135 bits (68), Expect = 1e-27
 Identities = 107/120 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1449   cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagagga 1508
              |||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 112178 cattaagaatgacgataagatgattcaagctgagggtgttgagtctctctctgaagagga 112119

                                                                          
Query: 1509   gctccggcaagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcg 1568
               || |||||||| || ||||| || |||||||| ||| ||| ||||||||||||||||||
Sbjct: 112118 acttcggcaagcctgtcgtgaacgtggtcacctaggtttgctgtcaacagaagaaatgcg 112059



 Score =  125 bits (63), Expect = 1e-24
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                          
Query: 1352   gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
              ||||| ||||||||||||| ||||||||||||||||||||||||||||| || || || |
Sbjct: 113120 gcagaccacgcttggtaaacatgtgcaaatatatgggtattcgacctttcggtactgacc 113061

                                             
Query: 1412   attacttgaggttcatgcttcgcaaaaaact 1442
              | |||||||||||||||||||||||||||||
Sbjct: 113060 actacttgaggttcatgcttcgcaaaaaact 113030



 Score =  123 bits (62), Expect = 4e-24
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                          
Query: 2308   agggatcatgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaag 2367
              ||||||| ||||||||| |||||||||||||| |||||| | || ||||||||||| |||
Sbjct: 108239 agggatcttgatggcaaggtgactcctgaggaggtagcgtcagcagcagcttatctgaag 108180

                                                                        
Query: 2368   gacaccatagggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
              || || ||||| || |||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 108179 gatacaataggaaaggaaggcgtccaagagcttgtcagcaacctctctaaagacaaag 108122



 Score =  109 bits (55), Expect = 6e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                          
Query: 1265   aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
              ||||||||| |||||||| ||| || |||||||||||||||| |||||||||||| ||||
Sbjct: 113297 aggttaggagaggtgaacatgtctcaaatgatgaaatcttgaacttcgcgaagctgttta 113238

                                             
Query: 1325   atgatgaattgaccttggataacatgagcag 1355
              |||||||  |||| |||||||||||||||||
Sbjct: 113237 atgatgagctgactttggataacatgagcag 113207



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                          
Query: 2225   aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
              |||| ||||||||||| |||  ||||||||||||||||||||| |||||||||||||| |
Sbjct: 108795 aggttgatgctatgctccagaaattagaaaaggagattgatgacgtggatgcacaaattg 108736

                                        
Query: 2285   gaaatcgctggcaactgcttgatagg 2310
              |||| || |||||| | |||||||||
Sbjct: 108735 gaaaccgatggcaaattcttgatagg 108710



 Score = 87.7 bits (44), Expect = 2e-13
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                          
Query: 1573   cagctacgagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcata 1632
              ||||| ||||| ||| |||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 111369 cagctccgagattggttggatctctcacttaatcatgctgtgccatcctctcttctcata 111310

                      
Query: 1633   ctttcaag 1640
              ||||||||
Sbjct: 111309 ctttcaag 111302



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                          
Query: 158    aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 217
              ||||| |||||||||||||| |  ||||| |||||| | |||||  ||  ||||| ||||
Sbjct: 114894 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 114835

                                                                        
Query: 218    gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 275
              ||||  |||| || ||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 114834 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 114777



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                           
Query: 2031   gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
              |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 109660 gtctgttagcaaggagcgtcaagagttcctcagccttgtcaacaa 109616



 Score = 50.1 bits (25), Expect = 0.046
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 2431   aagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
              |||||||||||||| ||||| ||||||||||| || ||| | || ||||||||
Sbjct: 108018 aagatccgtgtggaagacattgtgaagctggcatcacaaacagatgaaaacaa 107966



 Score = 50.1 bits (25), Expect = 0.046
 Identities = 115/145 (79%)
 Strand = Plus / Minus

                                                                          
Query: 2084   aactatataactccatgcttgaaagagaagacacagagggggcagaagaagctaagaagg 2143
              |||| |||||||| ||||||||||  || |  ||||| || | ||| ||||||||||| |
Sbjct: 109491 aactgtataactctatgcttgaaaaggagggtacagaaggtgaagaggaagctaagaaag 109432

                                                                          
Query: 2144   catatatggctgttagaggggagtcagacgacaccacagaggttgcttcagaggaaaagg 2203
              | || ||||||| |||||  ||||| ||| |  |  | ||||||| |  ||| |||||||
Sbjct: 109431 cttacatggctgctagagaagagtcggacaaggctgctgaggttgatgaagaagaaaagg 109372

                                       
Query: 2204   tctcgtcggcgctgattgacaaggt 2228
              |||| |||||||||||||| |||||
Sbjct: 109371 tctcatcggcgctgattgagaaggt 109347



to top

>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0496E03
          Length = 138622

 Score =  383 bits (193), Expect = e-102
 Identities = 286/317 (90%)
 Strand = Plus / Minus

                                                                         
Query: 804   cagagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgca 863
             ||||||||||||||||||||| ||||||||  |||| ||||||||| | || || |||||
Sbjct: 26440 cagagctgattgggctgcaaagctgaagcactggaaggatgaatttgtgtcaacgctgca 26381

                                                                         
Query: 864   gcattactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgct 923
             |||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 26380 gcattactggttagggacaaagctactctgggcagatgtgaggatttcgtcaagattact 26321

                                                                         
Query: 924   ggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtac 983
             ||||||||||||||||||||||| ||| |||||||||||||| || || || ||||||||
Sbjct: 26320 ggtgaaacttgctggtggaaagaacctttcaagaagagagagacaacaactgacccgtac 26261

                                                                         
Query: 984   aacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatgga 1043
             |||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||
Sbjct: 26260 aacagcagatatcttcaggctggtaccttttgctgtgttcatcattgttccattcatgga 26201

                                                                         
Query: 1044  attcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaaga 1103
              ||| |||| |||||||| || ||||| |||||||||||||| || ||||||||||||||
Sbjct: 26200 gttcttacttccagtgttcctcaagttatttccaaatatgcttccctcaactttccaaga 26141

                              
Query: 1104  caagatgaaagaagagg 1120
             |||||||||||||||||
Sbjct: 26140 caagatgaaagaagagg 26124



 Score =  278 bits (140), Expect = 1e-70
 Identities = 312/371 (84%), Gaps = 3/371 (0%)
 Strand = Plus / Minus

                                                                         
Query: 439   gggcttctgcgacgtccagctcacgtgatttctcactatggttatggaattggaaggaat 498
             ||||||||||| || ||||| || | ||||||||    || |||||||||||||||||| 
Sbjct: 26914 gggcttctgcggcgcccagcccatgggatttctctacctgcttatggaattggaaggaag 26855

                                                                         
Query: 499   gaatttacattgcctttgggagctagaggtttgttgcagtcagttcgcaaagcatcaact 558
             ||||||   |||||| |||| ||||||  |||| |||||||||| |||| ||| ||||||
Sbjct: 26854 gaatttgggttgcctatgggtgctagacatttgctgcagtcagtccgcacagcctcaact 26795

                                                                         
Query: 559   gcaactgctgggcaacctaaattggatattgaaga---acagggtgataatcaaaaccag 615
             ||||| |||||||||||||| ||||||||||||||   |||| ||||  |||| || |||
Sbjct: 26794 gcaacagctgggcaacctaagttggatattgaagatgaacagagtgaggatcagaaacag 26735

                                                                         
Query: 616   aataaaagnnnnnnngaagcatccccagaagaatgtgatcaggctgtggaagggctaagc 675
             || |||||       || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 26734 aacaaaaggaaaaaggaggcatccccagaagaatgtgatcaggctgtggaaggcctaagc 26675

                                                                         
Query: 676   acggcaaaagctaaagccaaagctaagcaggtgcaagattcgctaaaggctgaccagtca 735
             |  ||||||||||||||||||||||||||||| ||||| ||  ||||||||| ||| |||
Sbjct: 26674 agtgcaaaagctaaagccaaagctaagcaggtacaagaatctgtaaaggctggccaatca 26615

                                                                         
Query: 736   atcgtaaagaagttctgggcaaggcttctgggtattggtccggctcttcgagctgttgct 795
             || |||   || |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 26614 attgtacgaaaattctgggcgaggcttctgggtattggtcctgctctccgagctgttgct 26555

                        
Query: 796   tcaatgagcag 806
             || ||||||||
Sbjct: 26554 tcgatgagcag 26544



 Score =  220 bits (111), Expect = 2e-53
 Identities = 141/151 (93%)
 Strand = Plus / Minus

                                                                         
Query: 1118  aggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagata 1177
             ||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||
Sbjct: 25834 aggaagcgttgaaaaggaaactgaaagcaagaatggagtatgccaagtttttgcaagata 25775

                                                                         
Query: 1178  ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacag 1237
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 25774 ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaataaaacaaacag 25715

                                            
Query: 1238  ctgaagatctggacgaatttttaaacaaggt 1268
             | |||||||| || |||||||| ||||||||
Sbjct: 25714 ccgaagatcttgatgaatttttgaacaaggt 25684



 Score =  204 bits (103), Expect = 1e-48
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1639  agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
             |||||||||||| |  |||||| |||||| || ||||| |||||||||||||| || |||
Sbjct: 23507 agagcttttaccgtatctgggaaaatgaagcctgaggaggctgttgtagcaaccttatct 23448

                                                                         
Query: 1699  tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
             ||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 23447 tctctaccagatgaagttgtggatacagttgggaccgtattgccatctgaagattcggtt 23388

                                                    
Query: 1759  tctgagaggaggagaaaactggaattccttgagatgcag 1797
             |||||||||||||||||||||||||||||||||||||||
Sbjct: 23387 tctgagaggaggagaaaactggaattccttgagatgcag 23349



 Score =  149 bits (75), Expect = 7e-32
 Identities = 126/143 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1889  aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaag 1948
             ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||
Sbjct: 22272 aggctgctgaagaagatttggctttgaaggaaatgactggtcctactgctagggaagaag 22213

                                                                         
Query: 1949  aagaactgactgacgcaaaacgacatgacaaggaacagctctgtaatatcagtcaagcat 2008
             |||||||||  || |||||||  || || |||||| ||||||||||| | |||| |||| 
Sbjct: 22212 aagaactgagagaagcaaaacagcacgataaggaaaagctctgtaattttagtcgagcac 22153

                                    
Query: 2009  tggctgtgctggcatctgcatcg 2031
             ||||||| |||||||| ||||||
Sbjct: 22152 tggctgtactggcatccgcatcg 22130



 Score =  135 bits (68), Expect = 1e-27
 Identities = 107/120 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1449  cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagagga 1508
             |||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 24476 cattaagaatgacgataagatgattcaagctgagggtgttgagtctctctctgaagagga 24417

                                                                         
Query: 1509  gctccggcaagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcg 1568
              || |||||||| || ||||| || |||||||| ||| ||| ||||||||||||||||||
Sbjct: 24416 acttcggcaagcctgtcgtgaacgtggtcacctaggtttgctgtcaacagaagaaatgcg 24357



 Score =  125 bits (63), Expect = 1e-24
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                         
Query: 1352  gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
             ||||| ||||||||||||| ||||||||||||||||||||||||||||| || || || |
Sbjct: 25418 gcagaccacgcttggtaaacatgtgcaaatatatgggtattcgacctttcggtactgacc 25359

                                            
Query: 1412  attacttgaggttcatgcttcgcaaaaaact 1442
             | |||||||||||||||||||||||||||||
Sbjct: 25358 actacttgaggttcatgcttcgcaaaaaact 25328



 Score =  123 bits (62), Expect = 4e-24
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                         
Query: 2308  agggatcatgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaag 2367
             ||||||| ||||||||| |||||||||||||| |||||| | || ||||||||||| |||
Sbjct: 20537 agggatcttgatggcaaggtgactcctgaggaggtagcgtcagcagcagcttatctgaag 20478

                                                                       
Query: 2368  gacaccatagggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
             || || ||||| || |||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 20477 gatacaataggaaaggaaggcgtccaagagcttgtcagcaacctctctaaagacaaag 20420



 Score =  109 bits (55), Expect = 6e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1265  aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
             ||||||||| |||||||| ||| || |||||||||||||||| |||||||||||| ||||
Sbjct: 25595 aggttaggagaggtgaacatgtctcaaatgatgaaatcttgaacttcgcgaagctgttta 25536

                                            
Query: 1325  atgatgaattgaccttggataacatgagcag 1355
             |||||||  |||| |||||||||||||||||
Sbjct: 25535 atgatgagctgactttggataacatgagcag 25505



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                         
Query: 2225  aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
             |||| ||||||||||| |||  ||||||||||||||||||||| |||||||||||||| |
Sbjct: 21093 aggttgatgctatgctccagaaattagaaaaggagattgatgacgtggatgcacaaattg 21034

                                       
Query: 2285  gaaatcgctggcaactgcttgatagg 2310
             |||| || |||||| | |||||||||
Sbjct: 21033 gaaaccgatggcaaattcttgatagg 21008



 Score = 87.7 bits (44), Expect = 2e-13
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1573  cagctacgagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcata 1632
             ||||| ||||| ||| |||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 23667 cagctccgagattggttggatctctcacttaatcatgctgtgccatcctctcttctcata 23608

                     
Query: 1633  ctttcaag 1640
             ||||||||
Sbjct: 23607 ctttcaag 23600



 Score = 83.8 bits (42), Expect = 3e-12
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                         
Query: 158   aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 217
             ||||| |||||||||||||| |  ||||| |||||| | |||||  ||  ||||| ||||
Sbjct: 27192 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 27133

                                                                       
Query: 218   gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 275
             ||||  |||| || ||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct: 27132 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 27075



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                          
Query: 2031  gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
             |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 21958 gtctgttagcaaggagcgtcaagagttcctcagccttgtcaacaa 21914



 Score = 50.1 bits (25), Expect = 0.046
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 2431  aagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
             |||||||||||||| ||||| ||||||||||| || ||| | || ||||||||
Sbjct: 20316 aagatccgtgtggaagacattgtgaagctggcatcacaaacagatgaaaacaa 20264



 Score = 50.1 bits (25), Expect = 0.046
 Identities = 115/145 (79%)
 Strand = Plus / Minus

                                                                         
Query: 2084  aactatataactccatgcttgaaagagaagacacagagggggcagaagaagctaagaagg 2143
             |||| |||||||| ||||||||||  || |  ||||| || | ||| ||||||||||| |
Sbjct: 21789 aactgtataactctatgcttgaaaaggagggtacagaaggtgaagaggaagctaagaaag 21730

                                                                         
Query: 2144  catatatggctgttagaggggagtcagacgacaccacagaggttgcttcagaggaaaagg 2203
             | || ||||||| |||||  ||||| ||| |  |  | ||||||| |  ||| |||||||
Sbjct: 21729 cttacatggctgctagagaagagtcggacaaggctgctgaggttgatgaagaagaaaagg 21670

                                      
Query: 2204  tctcgtcggcgctgattgacaaggt 2228
             |||| |||||||||||||| |||||
Sbjct: 21669 tctcatcggcgctgattgagaaggt 21645



to top

>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence
          Length = 282600

 Score =  270 bits (136), Expect = 3e-68
 Identities = 271/316 (85%)
 Strand = Plus / Plus

                                                                         
Query: 805   agagctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcag 864
             ||||||||||||||||||||  |||||||| |||| |||||||||||||| |||||||||
Sbjct: 25501 agagctgattgggctgcaaagttgaagcattggaaggatgaatttatttctacactgcag 25560

                                                                         
Query: 865   cattactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctg 924
             ||||| ||| | || || ||||||||||||||||||||||| || ||||||||  || | 
Sbjct: 25561 cattattggttgggcactaagctactctgggcagatgttagaatctcatcaaggctgtta 25620

                                                                         
Query: 925   gtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtaca 984
             || ||||||||| |||||||||||||| ||||| ||||||||||||||||||| || |||
Sbjct: 25621 gttaaacttgctagtggaaagagcctcacaagacgagagaggcagcagctcacacgcaca 25680

                                                                         
Query: 985   acagcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaa 1044
             ||||||||| | |||||||| |||||| |||| || || ||| | || ||||||||||| 
Sbjct: 25681 acagcagatctattcaggctagtaccttttgcagtttttattatcgttccattcatggag 25740

                                                                         
Query: 1045  ttcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagac 1104
              || | || |||||||| || |||||||| ||||| ||| ||||||| |||||||| |||
Sbjct: 25741 ctcttgctgccagtgttcctcaagttgttcccaaacatgttgccatccactttccaggac 25800

                             
Query: 1105  aagatgaaagaagagg 1120
             || |||||||||||||
Sbjct: 25801 aaaatgaaagaagagg 25816



 Score =  170 bits (86), Expect = 2e-38
 Identities = 113/122 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1129  aaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaagaa 1188
             |||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||
Sbjct: 25912 aaaaggaaactgaaagcaaggatggaatatgcaaagtttttacaagacactgctaaagaa 25971

                                                                         
Query: 1189  atggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagatctg 1248
             ||||| |||||||||||||||||||| ||||||||||  |||||||| ||||||||||||
Sbjct: 25972 atggcgaaggaagttcaaacatcacgcagtggagaaatgaaacagactgctgaagatctg 26031

               
Query: 1249  ga 1250
             ||
Sbjct: 26032 ga 26033



 Score =  127 bits (64), Expect = 2e-25
 Identities = 118/136 (86%)
 Strand = Plus / Plus

                                                                         
Query: 1662  aatgaaacccgaggatgctgttgtagcaacgttgtcttctttgccagatgaagttgtgga 1721
             ||||||||| ||||| || ||||||||||| || |||||  |||||||||||||||| ||
Sbjct: 42815 aatgaaacctgaggaggccgttgtagcaaccttatcttccctgccagatgaagttgtcga 42874

                                                                         
Query: 1722  tacaattgggacagtattgccatctgaagattcagtttctgagaggaggagaaaactgga 1781
             |||| ||||||| ||| |||| ||||||||||| ||||| ||||||| ||||||| ||||
Sbjct: 42875 tacagttgggactgtactgccttctgaagattctgtttcagagaggaagagaaaattgga 42934

                             
Query: 1782  attccttgagatgcag 1797
             ||| || |||||||||
Sbjct: 42935 atttctggagatgcag 42950



 Score =  109 bits (55), Expect = 6e-20
 Identities = 109/127 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1449  cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagagga 1508
             |||||||||||||||||| |||||||||||||||||||| || |||||||||||| | ||
Sbjct: 26925 cattaagaatgatgataagatgattcaagctgagggtgtggagtctctttctgaatatga 26984

                                                                         
Query: 1509  gctccggcaagcttgccgtgatcgcggtcaccttggtctgcggtcaacagaagaaatgcg 1568
             ||| || ||||| || ||||| || || ||||||||| ||  ||||||||| || |||||
Sbjct: 26985 gcttcgacaagcatgtcgtgagcgtgggcaccttggtttgttgtcaacagaggagatgcg 27044

                    
Query: 1569  taaacag 1575
             | |||||
Sbjct: 27045 tcaacag 27051



 Score =  101 bits (51), Expect = 1e-17
 Identities = 93/107 (86%)
 Strand = Plus / Plus

                                                                         
Query: 2317  gatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccata 2376
             |||||||| ||||||||||| || ||||| || || |||  ||||||||| |||||||||
Sbjct: 47327 gatggcaaggtgactcctgaagaggtagctgcagctgcaaattatctcaaagacaccata 47386

                                                            
Query: 2377  gggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaa 2423
             ||   |||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 47387 ggagcagaaggcgtccaggagcttatcagcaatctttctaaagacaa 47433



 Score = 93.7 bits (47), Expect = 3e-15
 Identities = 142/173 (82%), Gaps = 3/173 (1%)
 Strand = Plus / Plus

                                                                         
Query: 634   gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
             |||||||| ||||||||||||||||| ||||||||  ||||||| |||||||| ||||| 
Sbjct: 25224 gcatcccctgaagaatgtgatcaggcagtggaaggattaagcactgcaaaagcgaaagca 25283

                                                                         
Query: 694   aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
             |||||||||| || | |||    || |||| ||||||| ||| | ||| |||| || |||
Sbjct: 25284 aaagctaagctggaggaag---tgcaaaagactgaccaatcagtggtacagaaattatgg 25340

                                                                  
Query: 754   gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
             |||| |||||| |||||||| || ||| | |||  | ||||||||||||||||
Sbjct: 25341 gcaaagcttcttggtattggccctgctttacgaattattgcttcaatgagcag 25393



 Score = 85.7 bits (43), Expect = 8e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                    
Query: 1889  aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctaggga 1943
             ||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 45662 aggctactgaagaagatttggctttgaaggaaatgactgagcctactgttaggga 45716



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                         
Query: 2225  aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
             |||| ||||||||||||||    ||||||||||||||||||||||| ||||| | ||| |
Sbjct: 46823 aggttgatgctatgcttcaaaagttagaaaaggagattgatgatgttgatgctcgaattg 46882

                                       
Query: 2285  gaaatcgctggcaactgcttgatagg 2310
             | ||||||||||| ||||| ||||||
Sbjct: 46883 gcaatcgctggcagctgctggatagg 46908



 Score = 69.9 bits (35), Expect = 5e-08
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                         
Query: 1265  aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
             |||||||||||||||  | ||  |||||||| ||||| |||||||| || ||||| ||||
Sbjct: 26160 aggttaggaaaggtgggcatgcctccaatgacgaaattttgagctttgcaaagctattta 26219

                                            
Query: 1325  atgatgaattgaccttggataacatgagcag 1355
             |||| ||  |||| |||||||||||||||||
Sbjct: 26220 atgacgagctgactttggataacatgagcag 26250



 Score = 69.9 bits (35), Expect = 5e-08
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 1984  cagctctgtaatatcagtcaagcattggctgtgctggcatctg 2026
             ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 45760 cagctttgtaatatcagtcaagcattggctgtgcttgcatctg 45802



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                         
Query: 1580  gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
             ||||||||||||| || ||||| |||||| |||||||||| |||||||| ||||| ||||
Sbjct: 42659 gagactggctggatctatcactcaatcattctgtgccatcgtctcttctaatactctcaa 42718

              
Query: 1640  g 1640
             |
Sbjct: 42719 g 42719



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 2031  gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaaggag 2079
             |||||||| ||||||||| ||||||||  | ||||||||||||||||||
Sbjct: 45906 gtctgttaccaaggagcgacaagagtttttaagccttgtcaacaaggag 45954



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 2424  agaaggaaagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
             |||||| || |||| |||||| ||||| |||||||||||||| ||| | |||||||||||
Sbjct: 47532 agaagggaatatccttgtggaagacattgtgaagctggcgtcacaaacagaggaaaacaa 47591

              
Query: 2484  c 2484
             |
Sbjct: 47592 c 47592



 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                         
Query: 1369  aatatgtgcaaatatatgggtattcgaccttttggcacggatcattacttgaggttcatg 1428
             |||||||| ||||| ||||| || | |||||||||||| || || |||||| | ||||||
Sbjct: 26327 aatatgtgtaaatacatggggatccaaccttttggcacagaccactacttgcgattcatg 26386

                             
Query: 1429  cttcgcaaaaaactac 1444
             ||||| || |||||||
Sbjct: 26387 cttcggaagaaactac 26402



to top

>emb|CR855209.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0092E01,
             complete sequence
          Length = 86215

 Score =  264 bits (133), Expect = 2e-66
 Identities = 268/313 (85%)
 Strand = Plus / Minus

                                                                         
Query: 808   gctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcat 867
             ||||| |||||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||
Sbjct: 21452 gctgactgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcat 21393

                                                                         
Query: 868   tactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtg 927
             || ||| | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||
Sbjct: 21392 tattggttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtg 21333

                                                                         
Query: 928   aaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaaca 987
             |||||||||||||||||||||||  |||||||||||||||| ||||| || || ||||||
Sbjct: 21332 aaacttgctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaaca 21273

                                                                         
Query: 988   gcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattc 1047
             || ||| | || ||||| |||||| |||||||||||||  |||| || ||||||||||| 
Sbjct: 21272 gctgatttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaattt 21213

                                                                         
Query: 1048  ctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaag 1107
              |||||||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||
Sbjct: 21212 ttactaccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaag 21153

                          
Query: 1108  atgaaagaagagg 1120
             ||||| |||||||
Sbjct: 21152 atgaaggaagagg 21140



 Score =  190 bits (96), Expect = 2e-44
 Identities = 132/144 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1126  ttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaa 1185
             |||||||||||| |||||||||||||||| |||||||  ||| |||||||||||||||||
Sbjct: 21038 ttgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaagatactgcaaaa 20979

                                                                         
Query: 1186  gaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagat 1245
             ||||||||||||||||| || || ||||||||||||||||  ||||||||||||||||||
Sbjct: 20978 gaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacagacagctgaagat 20919

                                     
Query: 1246  ctggacgaatttttaaacaaggtt 1269
             ||||| |||||||| |||||||||
Sbjct: 20918 ctggatgaatttttgaacaaggtt 20895



 Score =  137 bits (69), Expect = 3e-28
 Identities = 147/173 (84%)
 Strand = Plus / Minus

                                                                         
Query: 634   gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
             |||||||||||||| ||||||||||| ||||||||  ||||||| |||||||||||||| 
Sbjct: 21740 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 21681

                                                                         
Query: 694   aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
             |||||||||| |||||| ||    | |||| |||||||||||||| || | || || |||
Sbjct: 21680 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 21621

                                                                  
Query: 754   gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
             ||||  ||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 21620 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcag 21568



 Score =  107 bits (54), Expect = 2e-19
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                         
Query: 2316  tgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccat 2375
             |||||||||||| || ||||| || ||||| || || |||  ||||||||| ||||| ||
Sbjct: 16826 tgatggcaaagttacccctgacgaggtagcagctgcagcaaattatctcaaagacactat 16767

                                                               
Query: 2376  agggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
             |||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 16766 agggaaggaaggcgtccaagagcttattagcaatctttctaaagacaaag 16717



 Score = 93.7 bits (47), Expect = 3e-15
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1639  agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
             |||||||||||| || |||||| |||||| |||||||| |||||||||||||| || |||
Sbjct: 19247 agagcttttaccatgtctgggaaaatgaagcccgaggaggctgttgtagcaacattatct 19188

                                                
Query: 1699  tctttgccagatgaagttgtggatacaattgggac 1733
             ||| | |||||||||||||| |||||  |||||||
Sbjct: 19187 tctcttccagatgaagttgtagatactgttgggac 19153



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 1895  ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
             ||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 18389 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 18337



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1265  aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
             |||||||||||||||  | ||| || ||||| ||||| |||||||| || ||||| ||||
Sbjct: 20792 aggttaggaaaggtgggcatgtctcaaatgaagaaattttgagctttgcaaagctgttta 20733

                                        
Query: 1325  atgatgaattgaccttggataacatga 1351
             |||||||| |||| |||||||||||||
Sbjct: 20732 atgatgaactgactttggataacatga 20706



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                         
Query: 2225  aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
             |||| ||||| |||||||||  |||||| || |||||||||||||| ||||||| ||| |
Sbjct: 17188 aggttgatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaatag 17129

                                       
Query: 2285  gaaatcgctggcaactgcttgatagg 2310
             | || |||||||| ||||||||||||
Sbjct: 17128 gcaaccgctggcagctgcttgatagg 17103



 Score = 69.9 bits (35), Expect = 5e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1450  attaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggag 1509
             ||||||||||||||||| ||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 20032 attaagaatgatgataagatgatccaggctgagggcgtggagtctctttctgaggaggag 19973

                        
Query: 1510  ctccggcaagc 1520
             || || |||||
Sbjct: 19972 cttcgacaagc 19962



 Score = 67.9 bits (34), Expect = 2e-07
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1352  gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
             |||||||||| |||||||||||||| ||||||||||| || | ||||||||| || || |
Sbjct: 20626 gcagagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagacc 20567

                                   
Query: 1412  attacttgaggttcatgcttcg 1433
             | ||| |||  |||||||||||
Sbjct: 20566 actacctgacattcatgcttcg 20545



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1580  gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
             |||||||| ||||  |||||||||||||| |||||||||| |||||||| ||||| ||||
Sbjct: 19388 gagactggttggatttgtcacttaatcattctgtgccatcatctcttctaatactatcaa 19329

              
Query: 1640  g 1640
             |
Sbjct: 19328 g 19328



 Score = 52.0 bits (26), Expect = 0.012
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 1978  aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgc 2027
             ||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||
Sbjct: 18300 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgc 18251



 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 197   agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
             |||||||||  ||||| || ||||| |||||||||||||| ||||||
Sbjct: 22153 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 22107



to top

>emb|CR855207.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306B06, complete
             sequence
          Length = 87509

 Score =  264 bits (133), Expect = 2e-66
 Identities = 268/313 (85%)
 Strand = Plus / Minus

                                                                         
Query: 808   gctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcat 867
             ||||| |||||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||
Sbjct: 57294 gctgactgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcat 57235

                                                                         
Query: 868   tactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtg 927
             || ||| | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||
Sbjct: 57234 tattggttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtg 57175

                                                                         
Query: 928   aaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaaca 987
             |||||||||||||||||||||||  |||||||||||||||| ||||| || || ||||||
Sbjct: 57174 aaacttgctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaaca 57115

                                                                         
Query: 988   gcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattc 1047
             || ||| | || ||||| |||||| |||||||||||||  |||| || ||||||||||| 
Sbjct: 57114 gctgatttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaattt 57055

                                                                         
Query: 1048  ctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaag 1107
              |||||||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||
Sbjct: 57054 ttactaccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaag 56995

                          
Query: 1108  atgaaagaagagg 1120
             ||||| |||||||
Sbjct: 56994 atgaaggaagagg 56982



 Score =  190 bits (96), Expect = 2e-44
 Identities = 132/144 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1126  ttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaa 1185
             |||||||||||| |||||||||||||||| |||||||  ||| |||||||||||||||||
Sbjct: 56880 ttgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaagatactgcaaaa 56821

                                                                         
Query: 1186  gaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagat 1245
             ||||||||||||||||| || || ||||||||||||||||  ||||||||||||||||||
Sbjct: 56820 gaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacagacagctgaagat 56761

                                     
Query: 1246  ctggacgaatttttaaacaaggtt 1269
             ||||| |||||||| |||||||||
Sbjct: 56760 ctggatgaatttttgaacaaggtt 56737



 Score =  137 bits (69), Expect = 3e-28
 Identities = 147/173 (84%)
 Strand = Plus / Minus

                                                                         
Query: 634   gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
             |||||||||||||| ||||||||||| ||||||||  ||||||| |||||||||||||| 
Sbjct: 57582 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 57523

                                                                         
Query: 694   aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
             |||||||||| |||||| ||    | |||| |||||||||||||| || | || || |||
Sbjct: 57522 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 57463

                                                                  
Query: 754   gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
             ||||  ||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 57462 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcag 57410



 Score =  107 bits (54), Expect = 2e-19
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                         
Query: 2316  tgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccat 2375
             |||||||||||| || ||||| || ||||| || || |||  ||||||||| ||||| ||
Sbjct: 52668 tgatggcaaagttacccctgacgaggtagcagctgcagcaaattatctcaaagacactat 52609

                                                               
Query: 2376  agggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
             |||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 52608 agggaaggaaggcgtccaagagcttattagcaatctttctaaagacaaag 52559



 Score = 93.7 bits (47), Expect = 3e-15
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1639  agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
             |||||||||||| || |||||| |||||| |||||||| |||||||||||||| || |||
Sbjct: 55089 agagcttttaccatgtctgggaaaatgaagcccgaggaggctgttgtagcaacattatct 55030

                                                
Query: 1699  tctttgccagatgaagttgtggatacaattgggac 1733
             ||| | |||||||||||||| |||||  |||||||
Sbjct: 55029 tctcttccagatgaagttgtagatactgttgggac 54995



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 1895  ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
             ||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 54231 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 54179



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1265  aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
             |||||||||||||||  | ||| || ||||| ||||| |||||||| || ||||| ||||
Sbjct: 56634 aggttaggaaaggtgggcatgtctcaaatgaagaaattttgagctttgcaaagctgttta 56575

                                        
Query: 1325  atgatgaattgaccttggataacatga 1351
             |||||||| |||| |||||||||||||
Sbjct: 56574 atgatgaactgactttggataacatga 56548



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                         
Query: 2225  aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
             |||| ||||| |||||||||  |||||| || |||||||||||||| ||||||| ||| |
Sbjct: 53030 aggttgatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaatag 52971

                                       
Query: 2285  gaaatcgctggcaactgcttgatagg 2310
             | || |||||||| ||||||||||||
Sbjct: 52970 gcaaccgctggcagctgcttgatagg 52945



 Score = 69.9 bits (35), Expect = 5e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1450  attaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggag 1509
             ||||||||||||||||| ||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 55874 attaagaatgatgataagatgatccaggctgagggcgtggagtctctttctgaggaggag 55815

                        
Query: 1510  ctccggcaagc 1520
             || || |||||
Sbjct: 55814 cttcgacaagc 55804



 Score = 67.9 bits (34), Expect = 2e-07
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1352  gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
             |||||||||| |||||||||||||| ||||||||||| || | ||||||||| || || |
Sbjct: 56468 gcagagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagacc 56409

                                   
Query: 1412  attacttgaggttcatgcttcg 1433
             | ||| |||  |||||||||||
Sbjct: 56408 actacctgacattcatgcttcg 56387



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1580  gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
             |||||||| ||||  |||||||||||||| |||||||||| |||||||| ||||| ||||
Sbjct: 55230 gagactggttggatttgtcacttaatcattctgtgccatcatctcttctaatactatcaa 55171

              
Query: 1640  g 1640
             |
Sbjct: 55170 g 55170



 Score = 52.0 bits (26), Expect = 0.012
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 1978  aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgc 2027
             ||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||
Sbjct: 54142 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgc 54093



 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 197   agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
             |||||||||  ||||| || ||||| |||||||||||||| ||||||
Sbjct: 57995 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 57949



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  264 bits (133), Expect = 2e-66
 Identities = 268/313 (85%)
 Strand = Plus / Minus

                                                                            
Query: 808      gctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcat 867
                ||||| |||||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||
Sbjct: 24827358 gctgactgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcat 24827299

                                                                            
Query: 868      tactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtg 927
                || ||| | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||
Sbjct: 24827298 tattggttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtg 24827239

                                                                            
Query: 928      aaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaaca 987
                |||||||||||||||||||||||  |||||||||||||||| ||||| || || ||||||
Sbjct: 24827238 aaacttgctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaaca 24827179

                                                                            
Query: 988      gcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattc 1047
                || ||| | || ||||| |||||| |||||||||||||  |||| || ||||||||||| 
Sbjct: 24827178 gctgatttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaattt 24827119

                                                                            
Query: 1048     ctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaag 1107
                 |||||||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||
Sbjct: 24827118 ttactaccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaag 24827059

                             
Query: 1108     atgaaagaagagg 1120
                ||||| |||||||
Sbjct: 24827058 atgaaggaagagg 24827046



 Score =  190 bits (96), Expect = 2e-44
 Identities = 132/144 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1126     ttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaa 1185
                |||||||||||| |||||||||||||||| |||||||  ||| |||||||||||||||||
Sbjct: 24826944 ttgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaagatactgcaaaa 24826885

                                                                            
Query: 1186     gaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagat 1245
                ||||||||||||||||| || || ||||||||||||||||  ||||||||||||||||||
Sbjct: 24826884 gaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacagacagctgaagat 24826825

                                        
Query: 1246     ctggacgaatttttaaacaaggtt 1269
                ||||| |||||||| |||||||||
Sbjct: 24826824 ctggatgaatttttgaacaaggtt 24826801



 Score =  137 bits (69), Expect = 3e-28
 Identities = 147/173 (84%)
 Strand = Plus / Minus

                                                                            
Query: 634      gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
                |||||||||||||| ||||||||||| ||||||||  ||||||| |||||||||||||| 
Sbjct: 24827646 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 24827587

                                                                            
Query: 694      aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
                |||||||||| |||||| ||    | |||| |||||||||||||| || | || || |||
Sbjct: 24827586 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 24827527

                                                                     
Query: 754      gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
                ||||  ||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 24827526 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcag 24827474



 Score =  107 bits (54), Expect = 2e-19
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                            
Query: 2316     tgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccat 2375
                |||||||||||| || ||||| || ||||| || || |||  ||||||||| ||||| ||
Sbjct: 24822732 tgatggcaaagttacccctgacgaggtagcagctgcagcaaattatctcaaagacactat 24822673

                                                                  
Query: 2376     agggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
                |||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 24822672 agggaaggaaggcgtccaagagcttattagcaatctttctaaagacaaag 24822623



 Score =  101 bits (51), Expect = 1e-17
 Identities = 132/159 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1639     agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
                |||||||||||| || |||||| |||||| |||||||| |||||||||||||| || |||
Sbjct: 24825154 agagcttttaccatgtctgggaaaatgaagcccgaggaggctgttgtagcaacattatct 24825095

                                                                            
Query: 1699     tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
                ||| | |||||||||||||| |||||  ||||||||||  | || || |||||||| || 
Sbjct: 24825094 tctcttccagatgaagttgtagatactgttgggacagttcttccttcagaagattctgtg 24825035

                                                       
Query: 1759     tctgagaggaggagaaaactggaattccttgagatgcag 1797
                || || |||| | | ||| |||||||||| || ||||||
Sbjct: 24825034 tccgacaggaagcggaaattggaattcctggaaatgcag 24824996



 Score = 85.7 bits (43), Expect = 8e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1265     aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
                ||||||||||||||| || ||| || ||||| ||||| |||||||| || ||||| ||||
Sbjct: 24826698 aggttaggaaaggtggacatgtctcaaatgaagaaattttgagctttgcaaagctgttta 24826639

                                           
Query: 1325     atgatgaattgaccttggataacatga 1351
                |||||||| |||| |||||||||||||
Sbjct: 24826638 atgatgaactgactttggataacatga 24826612



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                     
Query: 1895     ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
                ||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 24824295 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 24824243



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                            
Query: 2225     aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
                |||| ||||| |||||||||  |||||| || |||||||||||||| ||||||| ||| |
Sbjct: 24823094 aggttgatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaatag 24823035

                                          
Query: 2285     gaaatcgctggcaactgcttgatagg 2310
                | || |||||||| ||||||||||||
Sbjct: 24823034 gcaaccgctggcagctgcttgatagg 24823009



 Score = 69.9 bits (35), Expect = 5e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1450     attaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggag 1509
                ||||||||||||||||| ||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 24825938 attaagaatgatgataagatgatccaggctgagggcgtggagtctctttctgaggaggag 24825879

                           
Query: 1510     ctccggcaagc 1520
                || || |||||
Sbjct: 24825878 cttcgacaagc 24825868



 Score = 67.9 bits (34), Expect = 2e-07
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1352     gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
                |||||||||| |||||||||||||| ||||||||||| || | ||||||||| || || |
Sbjct: 24826532 gcagagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagacc 24826473

                                      
Query: 1412     attacttgaggttcatgcttcg 1433
                | ||| |||  |||||||||||
Sbjct: 24826472 actacctgacattcatgcttcg 24826451



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1580     gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
                |||||||| ||||  |||||||||||||| |||||||||| |||||||| ||||| ||||
Sbjct: 24825295 gagactggttggatttgtcacttaatcattctgtgccatcatctcttctaatactatcaa 24825236

                 
Query: 1640     g 1640
                |
Sbjct: 24825235 g 24825235



 Score = 52.0 bits (26), Expect = 0.012
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 1978     aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgc 2027
                ||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||
Sbjct: 24824206 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgc 24824157



 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 197      agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
                |||||||||  ||||| || ||||| |||||||||||||| ||||||
Sbjct: 24828059 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 24828013



to top

>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
             complete sequence
          Length = 170765

 Score =  264 bits (133), Expect = 2e-66
 Identities = 268/313 (85%)
 Strand = Plus / Minus

                                                                         
Query: 808   gctgattgggctgcaaaactgaagcatgggaaagatgaatttatttccacactgcagcat 867
             ||||| |||||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||
Sbjct: 89074 gctgactgggctgcaaaattgaagcattggaaggatgagtttgtttctacactgcagcat 89015

                                                                         
Query: 868   tactggctaggaacaaagctactctgggcagatgttaggatttcatcaagattgctggtg 927
             || ||| | ||||| ||||| || ||||||||||||||||||||||| |||||| | |||
Sbjct: 89014 tattggttgggaactaagctgctgtgggcagatgttaggatttcatctagattgttagtg 88955

                                                                         
Query: 928   aaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaaca 987
             |||||||||||||||||||||||  |||||||||||||||| ||||| || || ||||||
Sbjct: 88954 aaacttgctggtggaaagagcctaacaagaagagagaggcaacagcttacacgcacaaca 88895

                                                                         
Query: 988   gcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaattc 1047
             || ||| | || ||||| |||||| |||||||||||||  |||| || ||||||||||| 
Sbjct: 88894 gctgatttgtttaggcttgtaccttttgctgtgttcatcattgttcccttcatggaattt 88835

                                                                         
Query: 1048  ctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagacaag 1107
              |||||||||| || || ||| |||| || || ||| ||||||| |||||||| ||||||
Sbjct: 88834 ttactaccagtcttcctcaagatgttccctaacatgttgccatcgactttccaggacaag 88775

                          
Query: 1108  atgaaagaagagg 1120
             ||||| |||||||
Sbjct: 88774 atgaaggaagagg 88762



 Score =  190 bits (96), Expect = 2e-44
 Identities = 132/144 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1126  ttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaa 1185
             |||||||||||| |||||||||||||||| |||||||  ||| |||||||||||||||||
Sbjct: 88660 ttgaaaaggaaattgaaagcaaggatggaatatgcaagatttttacaagatactgcaaaa 88601

                                                                         
Query: 1186  gaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagat 1245
             ||||||||||||||||| || || ||||||||||||||||  ||||||||||||||||||
Sbjct: 88600 gaaatggcaaaggaagtgcagacgtcacgtagtggagaaatgaaacagacagctgaagat 88541

                                     
Query: 1246  ctggacgaatttttaaacaaggtt 1269
             ||||| |||||||| |||||||||
Sbjct: 88540 ctggatgaatttttgaacaaggtt 88517



 Score =  137 bits (69), Expect = 3e-28
 Identities = 147/173 (84%)
 Strand = Plus / Minus

                                                                         
Query: 634   gcatccccagaagaatgtgatcaggctgtggaagggctaagcacggcaaaagctaaagcc 693
             |||||||||||||| ||||||||||| ||||||||  ||||||| |||||||||||||| 
Sbjct: 89362 gcatccccagaagagtgtgatcaggcggtggaaggcttaagcactgcaaaagctaaagct 89303

                                                                         
Query: 694   aaagctaagcaggtgcaagattcgctaaaggctgaccagtcaatcgtaaagaagttctgg 753
             |||||||||| |||||| ||    | |||| |||||||||||||| || | || || |||
Sbjct: 89302 aaagctaagctggtgcaggaagtacaaaagtctgaccagtcaatcatacataaattttgg 89243

                                                                  
Query: 754   gcaaggcttctgggtattggtccggctcttcgagctgttgcttcaatgagcag 806
             ||||  ||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 89242 gcaatacttctaggtattggacctgctctgcgtgctgttgcttcaatgagcag 89190



 Score =  107 bits (54), Expect = 2e-19
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                         
Query: 2316  tgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccat 2375
             |||||||||||| || ||||| || ||||| || || |||  ||||||||| ||||| ||
Sbjct: 84448 tgatggcaaagttacccctgacgaggtagcagctgcagcaaattatctcaaagacactat 84389

                                                               
Query: 2376  agggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
             |||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 84388 agggaaggaaggcgtccaagagcttattagcaatctttctaaagacaaag 84339



 Score =  101 bits (51), Expect = 1e-17
 Identities = 132/159 (83%)
 Strand = Plus / Minus

                                                                         
Query: 1639  agagcttttaccctggctgggagaatgaaacccgaggatgctgttgtagcaacgttgtct 1698
             |||||||||||| || |||||| |||||| |||||||| |||||||||||||| || |||
Sbjct: 86870 agagcttttaccatgtctgggaaaatgaagcccgaggaggctgttgtagcaacattatct 86811

                                                                         
Query: 1699  tctttgccagatgaagttgtggatacaattgggacagtattgccatctgaagattcagtt 1758
             ||| | |||||||||||||| |||||  ||||||||||  | || || |||||||| || 
Sbjct: 86810 tctcttccagatgaagttgtagatactgttgggacagttcttccttcagaagattctgtg 86751

                                                    
Query: 1759  tctgagaggaggagaaaactggaattccttgagatgcag 1797
             || || |||| | | ||| |||||||||| || ||||||
Sbjct: 86750 tccgacaggaagcggaaattggaattcctggaaatgcag 86712



 Score = 85.7 bits (43), Expect = 8e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1265  aggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagcttttta 1324
             ||||||||||||||| || ||| || ||||| ||||| |||||||| || ||||| ||||
Sbjct: 88414 aggttaggaaaggtggacatgtctcaaatgaagaaattttgagctttgcaaagctgttta 88355

                                        
Query: 1325  atgatgaattgaccttggataacatga 1351
             |||||||| |||| |||||||||||||
Sbjct: 88354 atgatgaactgactttggataacatga 88328



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 1895  ctgaagaagatttggctttaaaggaaatgactgagcctactgctagggaagaa 1947
             ||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 86011 ctgaagaagatgtggctttgaaagaaatgactgagcctactgctagggaagaa 85959



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                         
Query: 2225  aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
             |||| ||||| |||||||||  |||||| || |||||||||||||| ||||||| ||| |
Sbjct: 84810 aggttgatgcaatgcttcagaaattagagaaagagattgatgatgttgatgcacgaatag 84751

                                       
Query: 2285  gaaatcgctggcaactgcttgatagg 2310
             | || |||||||| ||||||||||||
Sbjct: 84750 gcaaccgctggcagctgcttgatagg 84725



 Score = 69.9 bits (35), Expect = 5e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1450  attaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaagaggag 1509
             ||||||||||||||||| ||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 87654 attaagaatgatgataagatgatccaggctgagggcgtggagtctctttctgaggaggag 87595

                        
Query: 1510  ctccggcaagc 1520
             || || |||||
Sbjct: 87594 cttcgacaagc 87584



 Score = 67.9 bits (34), Expect = 2e-07
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1352  gcagagcacgcttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggatc 1411
             |||||||||| |||||||||||||| ||||||||||| || | ||||||||| || || |
Sbjct: 88248 gcagagcacggttggtaaatatgtgtaaatatatggggatccaaccttttggtacagacc 88189

                                   
Query: 1412  attacttgaggttcatgcttcg 1433
             | ||| |||  |||||||||||
Sbjct: 88188 actacctgacattcatgcttcg 88167



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1580  gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
             |||||||| ||||  |||||||||||||| |||||||||| |||||||| ||||| ||||
Sbjct: 87011 gagactggttggatttgtcacttaatcattctgtgccatcatctcttctaatactatcaa 86952

              
Query: 1640  g 1640
             |
Sbjct: 86951 g 86951



 Score = 52.0 bits (26), Expect = 0.012
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 1978  aaggaacagctctgtaatatcagtcaagcattggctgtgctggcatctgc 2027
             ||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||
Sbjct: 85922 aaggagcagctttgtgatatcagccaagcattggccgtgcttgcatctgc 85873



 Score = 46.1 bits (23), Expect = 0.72
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 197   agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 243
             |||||||||  ||||| || ||||| |||||||||||||| ||||||
Sbjct: 89775 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 89729



to top

>ref|NM_105228.2| Arabidopsis thaliana calcium ion binding (AT1G65540) mRNA, complete
            cds
          Length = 2211

 Score =  200 bits (101), Expect = 2e-47
 Identities = 311/381 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1012 gttgctgtgttcattgttgtcccattcatggaattcctactaccagtgtttcttaagttg 1071
            ||||| || |||||| |||| ||||||||||| ||  | ||||| |||||||||||||||
Sbjct: 724  gttgcagttttcattattgttccattcatggagtttttgctaccggtgtttcttaagttg 783

                                                                        
Query: 1072 tttccaaatatgctgccatcaactttccaagacaagatgaaagaagaggaagcgttgaaa 1131
            || ||||| |||||||| ||||||||||| || ||||||||||||||||| ||  | |||
Sbjct: 784  ttcccaaacatgctgccgtcaactttccaggataagatgaaagaagaggaggctctaaaa 843

                                                                        
Query: 1132 aggaaactgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaagaaatg 1191
            || |   |||| ||||| ||||| ||||| |||||||| ||||||||||  |||||||||
Sbjct: 844  agaaggttgaatgcaagaatggaatatgctaagtttctccaagatactgtcaaagaaatg 903

                                                                        
Query: 1192 gcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagatctggac 1251
            ||||||||||| ||||| || || |||||||| | |||  |||| || |||||||| || 
Sbjct: 904  gcaaaggaagtccaaacctctcgcagtggagagataaagaagactgcagaagatctagat 963

                                                                        
Query: 1252 gaatttttaaacaaggttaggaaaggtgaacgtgtatccaatgatgaaatcttgagcttc 1311
            | |||| | | ||||||||| | ||| |   |||| || ||||||||||| ||| |||| 
Sbjct: 964  ggatttatgaccaaggttagaagaggagtcggtgtttcgaatgatgaaattttgggcttt 1023

                                                                        
Query: 1312 gcgaagctttttaatgatgaattgaccttggataacatgagcagagcacgcttggtaaat 1371
            || ||||| || ||||||||  | || ||||||||||| | |||  | || |||||||||
Sbjct: 1024 gcaaagctcttcaatgatgagcttacattggataacattaacaggtcccgattggtaaat 1083

                                 
Query: 1372 atgtgcaaatatatgggtatt 1392
            ||||||||||| |||||||||
Sbjct: 1084 atgtgcaaatacatgggtatt 1104



 Score = 52.0 bits (26), Expect = 0.012
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                      
Query: 2005 gcattggctgtgctggcatctgcatcgtctgttagcaaggagcgtcaagagttcctga 2062
            ||||| |||||  |||| || ||||| |||||||||| ||||||| ||||||||||||
Sbjct: 1696 gcattagctgttttggcttccgcatcttctgttagcatggagcgtgaagagttcctga 1753



 Score = 50.1 bits (25), Expect = 0.046
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 836 ggaaagatgaatttatttccacactgcagcattactggctaggaacaaagctactctggg 895
           |||||||||||||||  || || ||||| ||||||||||| || |||||| | || ||||
Sbjct: 548 ggaaagatgaatttaagtctactctgcaacattactggctggggacaaagttgctttggg 607

                        
Query: 896 cagatgttaggat 908
           | ||||| |||||
Sbjct: 608 ctgatgtcaggat 620



to top

>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence
          Length = 339089

 Score =  127 bits (64), Expect = 2e-25
 Identities = 118/136 (86%)
 Strand = Plus / Plus

                                                                         
Query: 1662  aatgaaacccgaggatgctgttgtagcaacgttgtcttctttgccagatgaagttgtgga 1721
             ||||||||| ||||| || ||||||||||| || |||||  |||||||||||||||| ||
Sbjct: 15200 aatgaaacctgaggaggccgttgtagcaaccttatcttccctgccagatgaagttgtcga 15259

                                                                         
Query: 1722  tacaattgggacagtattgccatctgaagattcagtttctgagaggaggagaaaactgga 1781
             |||| ||||||| ||| |||| ||||||||||| ||||| ||||||| ||||||| ||||
Sbjct: 15260 tacagttgggactgtactgccttctgaagattctgtttcagagaggaagagaaaattgga 15319

                             
Query: 1782  attccttgagatgcag 1797
             ||| || |||||||||
Sbjct: 15320 atttctggagatgcag 15335



 Score =  101 bits (51), Expect = 1e-17
 Identities = 93/107 (86%)
 Strand = Plus / Plus

                                                                         
Query: 2317  gatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacaccata 2376
             |||||||| ||||||||||| || ||||| || || |||  ||||||||| |||||||||
Sbjct: 19402 gatggcaaggtgactcctgaagaggtagctgcagctgcaaattatctcaaagacaccata 19461

                                                            
Query: 2377  gggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaa 2423
             ||   |||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 19462 ggagcagaaggcgtccaggagcttatcagcaatctttctaaagacaa 19508



 Score = 85.7 bits (43), Expect = 8e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                    
Query: 1889  aggctgctgaagaagatttggctttaaaggaaatgactgagcctactgctaggga 1943
             ||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 17737 aggctactgaagaagatttggctttgaaggaaatgactgagcctactgttaggga 17791



 Score = 75.8 bits (38), Expect = 8e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                         
Query: 2225  aggtggatgctatgcttcagggattagaaaaggagattgatgatgtggatgcacaaatcg 2284
             |||| ||||||||||||||    ||||||||||||||||||||||| ||||| | ||| |
Sbjct: 18898 aggttgatgctatgcttcaaaagttagaaaaggagattgatgatgttgatgctcgaattg 18957

                                       
Query: 2285  gaaatcgctggcaactgcttgatagg 2310
             | ||||||||||| ||||| ||||||
Sbjct: 18958 gcaatcgctggcagctgctggatagg 18983



 Score = 69.9 bits (35), Expect = 5e-08
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 1984  cagctctgtaatatcagtcaagcattggctgtgctggcatctg 2026
             ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 17835 cagctttgtaatatcagtcaagcattggctgtgcttgcatctg 17877



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                         
Query: 1580  gagactggctggacctgtcacttaatcatgctgtgccatcttctcttctcatactttcaa 1639
             ||||||||||||| || ||||| |||||| |||||||||| |||||||| ||||| ||||
Sbjct: 15044 gagactggctggatctatcactcaatcattctgtgccatcgtctcttctaatactctcaa 15103

              
Query: 1640  g 1640
             |
Sbjct: 15104 g 15104



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 2031  gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaaggag 2079
             |||||||| ||||||||| ||||||||  | ||||||||||||||||||
Sbjct: 17981 gtctgttaccaaggagcgacaagagtttttaagccttgtcaacaaggag 18029



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 2424  agaaggaaagatccgtgtggaggacatcgtgaagctggcgtctcaagccgaggaaaacaa 2483
             |||||| || |||| |||||| ||||| |||||||||||||| ||| | |||||||||||
Sbjct: 19607 agaagggaatatccttgtggaagacattgtgaagctggcgtcacaaacagaggaaaacaa 19666

              
Query: 2484  c 2484
             |
Sbjct: 19667 c 19667



to top

>gb|AC189484.1| Brassica rapa subsp. pekinensis clone KBrB083K19, complete sequence
          Length = 112573

 Score =  123 bits (62), Expect = 4e-24
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1138 ctgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaagaaatggcaaag 1197
            ||||| |||||||||||||||||||||||||| ||||||||||  |||||||||||||||
Sbjct: 6476 ctgaatgcaaggatggagtatgcaaagtttctccaagatactgtgaaagaaatggcaaag 6417

                                                              
Query: 1198 gaagttcaaacatcacgtagtggagaaacaaaacagacagctgaagatct 1247
            ||||| ||||| ||||| ||||| || | |||| ||||||| ||||||||
Sbjct: 6416 gaagtccaaacctcacgcagtggggagataaaaaagacagcagaagatct 6367



 Score = 79.8 bits (40), Expect = 5e-11
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                        
Query: 1021 ttcattgttgtcccattcatggaattcctactaccagtgtttcttaagttgtttccaaat 1080
            |||||| ||||||| |||||||| ||| | ||||| ||   ||||||| |||||||||| 
Sbjct: 6964 ttcattattgtcccgttcatggagttcttgctaccggtagctcttaagctgtttccaaac 6905

                                                    
Query: 1081 atgctgccatcaactttccaagacaagatgaaagaagagg 1120
            ||||| || || |||||||| |||||||||||||||||||
Sbjct: 6904 atgctcccgtcgactttccaggacaagatgaaagaagagg 6865



 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                        
Query: 836  ggaaagatgaatttatttccacactgcagcattactggctaggaacaaagctactctggg 895
            |||||||||||||||  || || |||||||| |||||||| || |||||||| |||||||
Sbjct: 7149 ggaaagatgaatttaaatctaccctgcagcactactggctggggacaaagctgctctggg 7090

                   
Query: 896  cagatgt 902
            | |||||
Sbjct: 7089 ctgatgt 7083



 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 1363 ttggtaaatatgtgcaaatatatgggtattcgaccttttggcacggat 1410
            |||||||||||||||||||| ||||||||| | || ||||| ||||||
Sbjct: 6082 ttggtaaatatgtgcaaatacatgggtattagcccatttggaacggat 6035



to top

>ref|NM_115844.2| Arabidopsis thaliana unknown protein (AT3G59820) mRNA, complete cds
          Length = 2471

 Score =  107 bits (54), Expect = 2e-19
 Identities = 379/482 (78%), Gaps = 4/482 (0%)
 Strand = Plus / Plus

                                                                        
Query: 913  tcaagattgctggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcag 972
            |||||||||||| | ||  | ||||||||||| || ||||| |||||||| ||||| |||
Sbjct: 688  tcaagattgctgctcaagttggctggtggaaaaagtctctccagaagagaaaggcaacag 747

                                                                        
Query: 973  ctcacccgtacaacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtc 1032
            || || || || ||||| |||||||| ||  | || ||  |||| ||||||||  |||| 
Sbjct: 748  ctaactcgaacgacagctgatatctttagattagtgccatttgcagtgttcatccttgtg 807

                                                                        
Query: 1033 ccattcatggaattcctactaccagtgtttctt-aagttgtttccaaatatgctgccatc 1091
            || || ||||| ||  | || ||||| |||||| ||| | || || |||||| | |||||
Sbjct: 808  ccgtttatggagtttttgctcccagt-tttcttgaagctcttccctaatatgttaccatc 866

                                                                        
Query: 1092 aactttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaagcaaggat 1151
            ||||||||| ||||||||||||||||||||||| |||||||||||| |    ||||||||
Sbjct: 867  aactttccaggacaagatgaaagaagaggaagctttgaaaaggaaattacttgcaaggat 926

                                                                        
Query: 1152 ggagtatgcaaagtttctacaagatactgcaaaagaaatggcaaaggaagttcaaaca-t 1210
             || ||||| |||||||| || || || || | ||| ||||| ||||||||| ||||| |
Sbjct: 927  agaatatgctaagtttcttcaggaaaccgccagagagatggctaaggaagtt-aaacatt 985

                                                                        
Query: 1211 cacgtagtggagaaacaaaacagacagctgaagatctggacgaatttttaaacaaggtta 1270
            || | | |||||||  ||| || || |||||||| ||||| || ||| || |||||||| 
Sbjct: 986  caagaactggagaagtaaagcaaaccgctgaagacctggatgagtttctagacaaggttc 1045

                                                                        
Query: 1271 ggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagctttttaatgatg 1330
            | | |||| ||   ||    ||||||||| | ||| |||| || |||||||| || ||||
Sbjct: 1046 gaagaggtcaaatagtccataatgatgaacttttgggctttgcaaagcttttcaacgatg 1105

                                                                        
Query: 1331 aattgaccttggataacatgagcagagcacgcttggtaaatatgtgcaaatatatgggta 1390
            |  | || ||||||||||| |||||  | |||||||| |  |||||||||||||||||||
Sbjct: 1106 agcttactttggataacattagcaggcctcgcttggttagcatgtgcaaatatatgggta 1165

              
Query: 1391 tt 1392
            ||
Sbjct: 1166 tt 1167



 Score = 48.1 bits (24), Expect = 0.18
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 1449 cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaag 1504
            ||||||| | ||||||||| |||||  |||||||||||| ||||| ||||| ||||
Sbjct: 1224 cattaaggaagatgataaactgattagagctgagggtgtggattccctttcagaag 1279



to top

>ref|NM_001035820.1| Arabidopsis thaliana unknown protein (AT3G59820) mRNA, complete cds
          Length = 2544

 Score =  107 bits (54), Expect = 2e-19
 Identities = 379/482 (78%), Gaps = 4/482 (0%)
 Strand = Plus / Plus

                                                                        
Query: 913  tcaagattgctggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcag 972
            |||||||||||| | ||  | ||||||||||| || ||||| |||||||| ||||| |||
Sbjct: 688  tcaagattgctgctcaagttggctggtggaaaaagtctctccagaagagaaaggcaacag 747

                                                                        
Query: 973  ctcacccgtacaacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtc 1032
            || || || || ||||| |||||||| ||  | || ||  |||| ||||||||  |||| 
Sbjct: 748  ctaactcgaacgacagctgatatctttagattagtgccatttgcagtgttcatccttgtg 807

                                                                        
Query: 1033 ccattcatggaattcctactaccagtgtttctt-aagttgtttccaaatatgctgccatc 1091
            || || ||||| ||  | || ||||| |||||| ||| | || || |||||| | |||||
Sbjct: 808  ccgtttatggagtttttgctcccagt-tttcttgaagctcttccctaatatgttaccatc 866

                                                                        
Query: 1092 aactttccaagacaagatgaaagaagaggaagcgttgaaaaggaaactgaaagcaaggat 1151
            ||||||||| ||||||||||||||||||||||| |||||||||||| |    ||||||||
Sbjct: 867  aactttccaggacaagatgaaagaagaggaagctttgaaaaggaaattacttgcaaggat 926

                                                                        
Query: 1152 ggagtatgcaaagtttctacaagatactgcaaaagaaatggcaaaggaagttcaaaca-t 1210
             || ||||| |||||||| || || || || | ||| ||||| ||||||||| ||||| |
Sbjct: 927  agaatatgctaagtttcttcaggaaaccgccagagagatggctaaggaagtt-aaacatt 985

                                                                        
Query: 1211 cacgtagtggagaaacaaaacagacagctgaagatctggacgaatttttaaacaaggtta 1270
            || | | |||||||  ||| || || |||||||| ||||| || ||| || |||||||| 
Sbjct: 986  caagaactggagaagtaaagcaaaccgctgaagacctggatgagtttctagacaaggttc 1045

                                                                        
Query: 1271 ggaaaggtgaacgtgtatccaatgatgaaatcttgagcttcgcgaagctttttaatgatg 1330
            | | |||| ||   ||    ||||||||| | ||| |||| || |||||||| || ||||
Sbjct: 1046 gaagaggtcaaatagtccataatgatgaacttttgggctttgcaaagcttttcaacgatg 1105

                                                                        
Query: 1331 aattgaccttggataacatgagcagagcacgcttggtaaatatgtgcaaatatatgggta 1390
            |  | || ||||||||||| |||||  | |||||||| |  |||||||||||||||||||
Sbjct: 1106 agcttactttggataacattagcaggcctcgcttggttagcatgtgcaaatatatgggta 1165

              
Query: 1391 tt 1392
            ||
Sbjct: 1166 tt 1167



 Score = 48.1 bits (24), Expect = 0.18
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 1449 cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaag 1504
            ||||||| | ||||||||| |||||  |||||||||||| ||||| ||||| ||||
Sbjct: 1224 cattaaggaagatgataaactgattagagctgagggtgtggattccctttcagaag 1279



to top

>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 109560

 Score =  105 bits (53), Expect = 9e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1012  gttgctgtgttcattgttgtcccattcatggaattcctactaccagtgtttcttaagttg 1071
             ||||| || |||||| |||| ||||||||||| ||  | ||||| |||||||||||||||
Sbjct: 44275 gttgcagttttcattattgttccattcatggagtttttgctaccggtgtttcttaagttg 44216

                                                              
Query: 1072  tttccaaatatgctgccatcaactttccaagacaagatgaaagaagagg 1120
             || ||||| |||||||| ||||||||||| || ||||||||||||||||
Sbjct: 44215 ttcccaaacatgctgccgtcaactttccaggataagatgaaagaagagg 44167



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1139  tgaaagcaaggatggagtatgcaaagtttctacaagatactgcaaaagaaatggcaaagg 1198
             |||| ||||| ||||| ||||| |||||||| ||||||||||  ||||||||||||||||
Sbjct: 43983 tgaatgcaagaatggaatatgctaagtttctccaagatactgtcaaagaaatggcaaagg 43924

                                      
Query: 1199  aagttcaaacatcacgtagtggaga 1223
             |||| ||||| || || ||||||||
Sbjct: 43923 aagtccaaacctctcgcagtggaga 43899



 Score = 52.0 bits (26), Expect = 0.012
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 1363  ttggtaaatatgtgcaaatatatgggtatt 1392
             |||||||||||||||||||| |||||||||
Sbjct: 43586 ttggtaaatatgtgcaaatacatgggtatt 43557



 Score = 50.1 bits (25), Expect = 0.046
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                         
Query: 836   ggaaagatgaatttatttccacactgcagcattactggctaggaacaaagctactctggg 895
             |||||||||||||||  || || ||||| ||||||||||| || |||||| | || ||||
Sbjct: 44451 ggaaagatgaatttaagtctactctgcaacattactggctggggacaaagttgctttggg 44392

                          
Query: 896   cagatgttaggat 908
             | ||||| |||||
Sbjct: 44391 ctgatgtcaggat 44379



 Score = 48.1 bits (24), Expect = 0.18
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 2031  gtctgttagcaaggagcgtcaagagttcctga 2062
             ||||||||||| ||||||| ||||||||||||
Sbjct: 42268 gtctgttagcatggagcgtgaagagttcctga 42237



to top

>gb|AY112372.1| Zea mays CL6272_1 mRNA sequence
          Length = 1354

 Score =  101 bits (51), Expect = 1e-17
 Identities = 126/151 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2255 aggagattgatgatgtggatgcacaaatcggaaatcgctggcaactgcttgatagggatc 2314
            |||||||||||||||| ||||| | ||| || ||||||||||| ||||| ||||||||  
Sbjct: 661  aggagattgatgatgttgatgctcgaattggcaatcgctggcagctgctggatagggact 720

                                                                        
Query: 2315 atgatggcaaagtgactcctgaggaagtagcggcggccgcagcttatctcaaggacacca 2374
              |||||||| ||||||||||| || ||||| || || |||  ||||||||| ||| |||
Sbjct: 721  gcgatggcaaggtgactcctgaagaggtagctgcagctgcaaattatctcaaagacccca 780

                                           
Query: 2375 tagggaaagaaggcgtccaagagcttatcag 2405
            ||||   |||||||||||| |||||||||||
Sbjct: 781  taggagcagaaggcgtccaggagcttatcag 811



to top

>gb|AC129715.48| Medicago truncatula clone mth2-36p23, complete sequence
          Length = 134003

 Score = 93.7 bits (47), Expect = 3e-15
 Identities = 155/191 (81%)
 Strand = Plus / Minus

                                                                         
Query: 926   tgaaacttgctggtggaaagagcctctcaagaagagagaggcagcagctcacccgtacaa 985
             |||| ||||||  ||| ||||| ||||| ||||| ||||| ||||| || || || || |
Sbjct: 71315 tgaagcttgctaatgggaagagtctctctagaagggagagacagcaactgacgcgaacta 71256

                                                                         
Query: 986   cagcagatatcttcaggctggtacctgttgctgtgttcattgttgtcccattcatggaat 1045
             | || |||||||| ||||| || |||||||| || |||||| ||||||| || |||||||
Sbjct: 71255 ctgccgatatctttaggctagttcctgttgcagttttcattattgtcccctttatggaat 71196

                                                                         
Query: 1046  tcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaactttccaagaca 1105
             ||||  | || |||||||||||| | || || || ||| |||||||||| || || ||||
Sbjct: 71195 tcctcttgcctgtgtttcttaaggtattccccaacatgttgccatcaacatttcaggaca 71136

                        
Query: 1106  agatgaaagaa 1116
             |||||||||||
Sbjct: 71135 agatgaaagaa 71125



 Score = 89.7 bits (45), Expect = 5e-14
 Identities = 126/153 (82%)
 Strand = Plus / Minus

                                                                         
Query: 1118  aggaagcgttgaaaaggaaactgaaagcaaggatggagtatgcaaagtttctacaagata 1177
             ||||||| |||||||||||||| || ||||| |||||||||||||  || || |||||||
Sbjct: 70591 aggaagcattgaaaaggaaactcaaggcaagaatggagtatgcaagattccttcaagata 70532

                                                                         
Query: 1178  ctgcaaaagaaatggcaaaggaagttcaaacatcacgtagtggagaaacaaaacagacag 1237
             | |  |||||||||||||| ||||||||||  ||  |||| |||||||  ||  | ||||
Sbjct: 70531 cagtcaaagaaatggcaaaagaagttcaaaactccggtagcggagaaaagaagaaaacag 70472

                                              
Query: 1238  ctgaagatctggacgaatttttaaacaaggtta 1270
             |||||||||| || || ||| |||||| |||||
Sbjct: 70471 ctgaagatcttgatgactttataaacatggtta 70439



 Score = 50.1 bits (25), Expect = 0.046
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 2377  gggaaagaaggcgtccaagagcttatcagcaagctttctaaagacaaag 2425
             |||||||||||||||||||| ||  ||||||| ||||| ||||| ||||
Sbjct: 64783 gggaaagaaggcgtccaagaactcgtcagcaatctttccaaagataaag 64735



 Score = 46.1 bits (23), Expect = 0.72
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 1450  attaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaag 1504
             |||||| | ||||||||| |||||||||  || ||||| ||||||||||| ||||
Sbjct: 69704 attaaggaagatgataaattgattcaagaagaaggtgtagattctctttcagaag 69650



to top

>emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F24G16
          Length = 100906

 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 167/209 (79%), Gaps = 2/209 (0%)
 Strand = Plus / Minus

                                                                         
Query: 913   tcaagattgctggtgaaacttgctggtggaaagagcctctcaagaagagagaggcagcag 972
             |||||||||||| | ||  | ||||||||||| || ||||| |||||||| ||||| |||
Sbjct: 33815 tcaagattgctgctcaagttggctggtggaaaaagtctctccagaagagaaaggcaacag 33756

                                                                         
Query: 973   ctcacccgtacaacagcagatatcttcaggctggtacctgttgctgtgttcattgttgtc 1032
             || || || || ||||| |||||||| ||  | || ||  |||| ||||||||  |||| 
Sbjct: 33755 ctaactcgaacgacagctgatatctttagattagtgccatttgcagtgttcatccttgtg 33696

                                                                         
Query: 1033  ccattcatggaattcctactaccagtgtttctt-aagttgtttccaaatatgctgccatc 1091
             || || ||||| ||  | || ||||| |||||| ||| | || || |||||| | |||||
Sbjct: 33695 ccgtttatggagtttttgctcccagt-tttcttgaagctcttccctaatatgttaccatc 33637

                                          
Query: 1092  aactttccaagacaagatgaaagaagagg 1120
             ||||||||| |||||||||||||||||||
Sbjct: 33636 aactttccaggacaagatgaaagaagagg 33608



 Score = 48.1 bits (24), Expect = 0.18
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 1449  cattaagaatgatgataaaatgattcaagctgagggtgttgattctctttctgaag 1504
             ||||||| | ||||||||| |||||  |||||||||||| ||||| ||||| ||||
Sbjct: 32904 cattaaggaagatgataaactgattagagctgagggtgtggattccctttcagaag 32849



to top

>emb|CT832021.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN041P16, full
            insert sequence
          Length = 1416

 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaaggagat 2081
            ||||||||||||||||| ||||||||||||  |||||||| |||| |||||
Sbjct: 961  gtctgttagcaaggagcatcaagagttcctcggccttgtcgacaaagagat 1011



to top

>ref|NM_001061629.1| Oryza sativa (japonica cultivar-group) Os05g0285900 (Os05g0285900)
            mRNA, partial cds
          Length = 1162

 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaaggagat 2081
            ||||||||||||||||| ||||||||||||  |||||||| |||| |||||
Sbjct: 683  gtctgttagcaaggagcatcaagagttcctcggccttgtcgacaaagagat 733



to top

>dbj|AK073229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020D07, full
            insert sequence
          Length = 3324

 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaaggagat 2081
            ||||||||||||||||| ||||||||||||  |||||||| |||| |||||
Sbjct: 2104 gtctgttagcaaggagcatcaagagttcctcggccttgtcgacaaagagat 2154



to top

>dbj|AK066158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054I19, full
            insert sequence
          Length = 1126

 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaaggagat 2081
            ||||||||||||||||| ||||||||||||  |||||||| |||| |||||
Sbjct: 643  gtctgttagcaaggagcatcaagagttcctcggccttgtcgacaaagagat 693



to top

>dbj|AK061533.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F04, full
            insert sequence
          Length = 1162

 Score = 61.9 bits (31), Expect = 1e-05
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 2031 gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaaggagat 2081
            ||||||||||||||||| ||||||||||||  |||||||| |||| |||||
Sbjct: 683  gtctgttagcaaggagcatcaagagttcctcggccttgtcgacaaagagat 733



to top

>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0025G07, complete sequence
          Length = 167136

 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 2031  gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
             ||||||||||||||||| ||||||||||||  |||||||| ||||
Sbjct: 73936 gtctgttagcaaggagcatcaagagttcctcggccttgtcgacaa 73980



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 2031     gtctgttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
                ||||||||||||||||| ||||||||||||  |||||||| ||||
Sbjct: 12196824 gtctgttagcaaggagcatcaagagttcctcggccttgtcgacaa 12196868



to top

>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence
          Length = 166439

 Score = 50.1 bits (25), Expect = 0.046
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 34    cggcccctttcctcccttcccctct 58
             |||||||||||||||||||||||||
Sbjct: 23873 cggcccctttcctcccttcccctct 23849



to top

>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence
          Length = 192097

 Score = 50.1 bits (25), Expect = 0.046
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 34     cggcccctttcctcccttcccctct 58
              |||||||||||||||||||||||||
Sbjct: 190854 cggcccctttcctcccttcccctct 190830



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.046
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 2035    gttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
               ||||||||||||| ||||||||||||  |||||||| ||||
Sbjct: 5707696 gttagcaaggagcatcaagagttcctcggccttgtcgacaa 5707736



to top

>dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0030K05
          Length = 157835

 Score = 50.1 bits (25), Expect = 0.046
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 2035   gttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
              ||||||||||||| ||||||||||||  |||||||| ||||
Sbjct: 142374 gttagcaaggagcatcaagagttcctcggccttgtcgacaa 142414



to top

>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0701E06
          Length = 123415

 Score = 50.1 bits (25), Expect = 0.046
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 2035 gttagcaaggagcgtcaagagttcctgagccttgtcaacaa 2075
            ||||||||||||| ||||||||||||  |||||||| ||||
Sbjct: 3901 gttagcaaggagcatcaagagttcctcggccttgtcgacaa 3941



to top

>ref|NM_001077618.1| Danio rerio zgc:152924 (zgc:152924), mRNA
 gb|BC125835.1| Danio rerio zgc:152924, mRNA (cDNA clone MGC:152924 IMAGE:5411037),
            complete cds
          Length = 1804

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1485 tgttgattctctttctgaagaggagctc 1512
            |||||||||||||||||||||| |||||
Sbjct: 844  tgttgattctctttctgaagagcagctc 871



to top

>ref|XM_519714.2| PREDICTED: Pan troglodytes leucine zipper-EF-hand containing
            transmembrane protein 2, transcript variant 6 (LETM2),
            mRNA
          Length = 2047

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1018 gtgttcattgttgtcccattcatggaattcctactaccagtgtttcttaagttgtttcca 1077
            ||||||||  |||| || |||||||||||| || ||||||||||||| ||  | || |||
Sbjct: 847  gtgttcataattgtacccttcatggaattcttattaccagtgtttctgaaactcttccca 906

                                
Query: 1078 aatatgctgccatcaacttt 1097
             | ||| |||||||||||||
Sbjct: 907  gagatgttgccatcaacttt 926



to top

>ref|XM_001171298.1| PREDICTED: Pan troglodytes leucine zipper-EF-hand containing
            transmembrane protein 2, transcript variant 1 (LETM2),
            mRNA
          Length = 1769

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1018 gtgttcattgttgtcccattcatggaattcctactaccagtgtttcttaagttgtttcca 1077
            ||||||||  |||| || |||||||||||| || ||||||||||||| ||  | || |||
Sbjct: 569  gtgttcataattgtacccttcatggaattcttattaccagtgtttctgaaactcttccca 628

                                
Query: 1078 aatatgctgccatcaacttt 1097
             | ||| |||||||||||||
Sbjct: 629  gagatgttgccatcaacttt 648



to top

>gb|AC073520.6| Homo sapiens BAC clone RP11-792H4 from 7, complete sequence
          Length = 85219

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 44    cctcccttcccctctgctccccaa 67
             ||||||||||||||||||||||||
Sbjct: 10733 cctcccttcccctctgctccccaa 10710



to top

>dbj|AB168539.1| Macaca fascicularis testis cDNA clone: QtsA-12869, similar to human
            hypothetical protein FLJ25409 (FLJ25409), mRNA, RefSeq:
            NM_144652.1
          Length = 2225

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1018 gtgttcattgttgtcccattcatggaattcctactaccagtgtttcttaagttgtttcca 1077
            ||||||||  |||| || |||||||||||| || ||||||||||||| ||  | || |||
Sbjct: 753  gtgttcataattgtacccttcatggaattcttattaccagtgtttctgaaactcttccca 812

                                
Query: 1078 aatatgctgccatcaacttt 1097
             | ||| |||||||||||||
Sbjct: 813  gagatgttgccatcaacttt 832



to top

>ref|XM_799670.1| Trypanosoma cruzi strain CL Brener DNA repair protein
            (Tc00.1047053510063.39) partial mRNA
          Length = 1393

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 2185 gttgcttcagaggaaaaggtctcg 2208
            ||||||||||||||||||||||||
Sbjct: 500  gttgcttcagaggaaaaggtctcg 523



to top

>ref|XM_801429.1| Trypanosoma cruzi strain CL Brener DNA repair protein
            (Tc00.1047053510065.20) partial mRNA
          Length = 1824

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 2185 gttgcttcagaggaaaaggtctcg 2208
            ||||||||||||||||||||||||
Sbjct: 931  gttgcttcagaggaaaaggtctcg 954



to top

>ref|XM_682597.1| PREDICTED: Danio rerio similar to Zinc finger, HIT domain containing
            2 (LOC559269), mRNA
          Length = 1767

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1485 tgttgattctctttctgaagaggagctc 1512
            |||||||||||||||||||||| |||||
Sbjct: 843  tgttgattctctttctgaagagcagctc 870



to top

>ref|XM_681820.1| PREDICTED: Danio rerio similar to Zinc finger, HIT domain containing
            2 (LOC558591), mRNA
          Length = 1767

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1485 tgttgattctctttctgaagaggagctc 1512
            |||||||||||||||||||||| |||||
Sbjct: 843  tgttgattctctttctgaagagcagctc 870



to top

>gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromosome 7, complete
             sequence
          Length = 205208

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 44    cctcccttcccctctgctccccaa 67
             ||||||||||||||||||||||||
Sbjct: 53658 cctcccttcccctctgctccccaa 53681



to top

>emb|BX088530.6| Zebrafish DNA sequence from clone DKEY-56F11 in linkage group 10,
             complete sequence
          Length = 165564

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 1485  tgttgattctctttctgaagaggagctc 1512
             |||||||||||||||||||||| |||||
Sbjct: 13529 tgttgattctctttctgaagagcagctc 13556



to top

>emb|BX248510.3| Zebrafish DNA sequence from clone DKEY-88P24 in linkage group 10,
              complete sequence
          Length = 170386

 Score = 48.1 bits (24), Expect = 0.18
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 1485   tgttgattctctttctgaagaggagctc 1512
              |||||||||||||||||||||| |||||
Sbjct: 159780 tgttgattctctttctgaagagcagctc 159807



to top

>gb|AC146383.4| Pan troglodytes BAC clone RP43-125D18 from 7, complete sequence
          Length = 141329

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 43     tcctcccttcccctctgctcccc 65
              |||||||||||||||||||||||
Sbjct: 129028 tcctcccttcccctctgctcccc 129050



to top

>gb|AC146220.3| Pan troglodytes BAC clone RP43-27B14 from 7, complete sequence
          Length = 200195

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 43    tcctcccttcccctctgctcccc 65
             |||||||||||||||||||||||
Sbjct: 89955 tcctcccttcccctctgctcccc 89977



to top

>gb|AC152829.2| Ornithorhynchus anatinus BAC clone OABb-466A1 from chromosome unknown,
             complete sequence
          Length = 160523

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 37    cccctttcctcccttcccctctgctcc 63
             ||||||||||||||| |||||||||||
Sbjct: 92170 cccctttcctccctttccctctgctcc 92144



to top

>gb|AC008266.3|AC008266 Homo sapiens PAC clone RP5-1145A24 from 7p11.2-p21, complete sequence
          Length = 177675

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 43     tcctcccttcccctctgctcccc 65
              |||||||||||||||||||||||
Sbjct: 101655 tcctcccttcccctctgctcccc 101633



to top

>gb|AC006960.1|AC006960 Homo sapiens clone RP11-182J23 from 7p14-15, complete sequence
          Length = 179757

 Score = 46.1 bits (23), Expect = 0.72
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 43    tcctcccttcccctctgctcccc 65
             |||||||||||||||||||||||
Sbjct: 39631 tcctcccttcccctctgctcccc 39609



to top

>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 497     atgaatttacattgcctttggg 518
               ||||||||||||||||||||||
Sbjct: 2128740 atgaatttacattgcctttggg 2128719



to top

>gb|BC077601.1| Xenopus laevis UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase,
           polypeptide 3, mRNA (cDNA clone MGC:84507
           IMAGE:5077911), complete cds
          Length = 2265

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 404 attttacaaaggggggtctgct 425
           ||||||||||||||||||||||
Sbjct: 234 attttacaaaggggggtctgct 255



to top

>gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosome 13, complete
             sequence
          Length = 177414

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 37    cccctttcctcccttcccctct 58
             ||||||||||||||||||||||
Sbjct: 19672 cccctttcctcccttcccctct 19651



to top

>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence
          Length = 219825

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 37     cccctttcctcccttcccctctgctcccca 66
              ||||||||||||| |||||||| |||||||
Sbjct: 157571 cccctttcctcccctcccctctcctcccca 157542



to top

>emb|CR848708.12| Wallaby DNA sequence from clone MEKBa-201B9, complete sequence
          Length = 194524

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 37    cccctttcctcccttcccctct 58
             ||||||||||||||||||||||
Sbjct: 28855 cccctttcctcccttcccctct 28834



to top

>emb|AL513016.5| Human DNA sequence from clone RP11-474O21 on chromosome 1 Contains the
             5' end of the gene for short-chain dehydrogenase/reductase
             1 (SDR1), two genes for novel proteins similar to
             esterases, a ribosomal protein L23a (RPL23A) pseudogene,
             the gene for a novel protein (MGC35194) and a CpG island,
             complete sequence
          Length = 150720

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 156   tgaaaagacatgaccttggcct 177
             ||||||||||||||||||||||
Sbjct: 78902 tgaaaagacatgaccttggcct 78923



to top

>emb|AL357055.18| Human DNA sequence from clone RP11-389O22 on chromosome 1 Contains the
             3' end of a novel gene, the 5' end of a novel gene, the
             LRIG2 gene for leucine-rich repeats and
             immunoglobulin-like domains 2, a ring finger protein 12
             (RNF12) pseudogene, a ribosomal protein S19 (RPS19)
             pseudogene, a ribosomal protein S15 (RPS15) pseudogene and
             a CpG island, complete sequence
          Length = 188812

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 44    cctcccttcccctctgctcccc 65
             ||||||||||||||||||||||
Sbjct: 39196 cctcccttcccctctgctcccc 39217



to top

>gb|AC122360.4| Mus musculus BAC clone RP23-428P21 from chromosome 10, complete
             sequence
          Length = 210757

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1011  tgttgctgtgttcattgttgtc 1032
             ||||||||||||||||||||||
Sbjct: 82886 tgttgctgtgttcattgttgtc 82865



to top

>emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chromosome 1, complete
             sequence
          Length = 225410

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 156   tgaaaagacatgaccttggcct 177
             ||||||||||||||||||||||
Sbjct: 78935 tgaaaagacatgaccttggcct 78956



to top

>gb|AC114814.5| Homo sapiens BAC clone RP11-1345D17 from 2, complete sequence
          Length = 181706

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    tcctcccttcccctctgctccc 64
             ||||||||||||||||||||||
Sbjct: 97519 tcctcccttcccctctgctccc 97540



to top

>gb|AC087623.21| Homo sapiens chromosome 8, clone RP11-350N15, complete sequence
          Length = 162835

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                          
Query: 1036   ttcatggaattcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaact 1095
              |||||||||||| || ||||||||||||| ||  | || ||| | ||| |||||||||||
Sbjct: 118163 ttcatggaattcttattaccagtgtttctgaaactcttcccagagatgttgccatcaact 118104

                
Query: 1096   tt 1097
              ||
Sbjct: 118103 tt 118102



to top

>gb|AC102898.15| Mus musculus chromosome 7, clone RP24-321O23, complete sequence
          Length = 173253

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 40     ctttcctcccttcccctctgctcccc 65
              |||||||||| |||||||||||||||
Sbjct: 139365 ctttcctcccctcccctctgctcccc 139390



to top

>gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, complete sequence
          Length = 191211

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 271    ctctcgtcttcctcctcttcattcct 296
              ||||| ||||||||||||||||||||
Sbjct: 114694 ctctcctcttcctcctcttcattcct 114669



to top

>emb|AL832241.1|HSM803548 Homo sapiens mRNA; cDNA DKFZp686I0477 (from clone DKFZp686I0477)
          Length = 2051

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1036 ttcatggaattcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaact 1095
            |||||||||||| || ||||||||||||| ||  | || ||| | ||| |||||||||||
Sbjct: 1761 ttcatggaattcttattaccagtgtttctgaaactcttcccagagatgttgccatcaact 1820

              
Query: 1096 tt 1097
            ||
Sbjct: 1821 tt 1822



to top

>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence
          Length = 240321

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 37     cccctttcctcccttcccctct 58
              ||||||||||||||||||||||
Sbjct: 210188 cccctttcctcccttcccctct 210167



to top

>gb|AY173945.1| Homo sapiens leucine zipper-EF-hand containing transmembrane protein
            1-like protein mRNA, complete cds
          Length = 1763

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1036 ttcatggaattcctactaccagtgtttcttaagttgtttccaaatatgctgccatcaact 1095
            |||||||||||| || ||||||||||||| ||  | || ||| | ||| |||||||||||
Sbjct: 587  ttcatggaattcttattaccagtgtttctgaaactcttcccagagatgttgccatcaact 646

              
Query: 1096 tt 1097
            ||
Sbjct: 647  tt 648



to top

>emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete
              sequence
          Length = 208265

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 37     cccctttcctcccttcccctctgctcccca 66
              ||||||||||||| |||||||| |||||||
Sbjct: 146010 cccctttcctcccctcccctctcctcccca 145981


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 560,239,947
Number of extensions: 31540535
Number of successful extensions: 172353
Number of sequences better than 10.0: 71
Number of HSP's gapped: 172333
Number of HSP's successfully gapped: 231
Length of query: 2912
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2889
Effective length of database: 18,503,978,556
Effective search space: 53457994048284
Effective search space used: 53457994048284
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
to top