| Clone Name | FLbaf73j05 |
|---|---|
| Clone Library Name | barley_pub |
>Q9VFP2:RDX_DROME Protein roadkill - Drosophila melanogaster (Fruit fly)| Length = 829 Score = 49.3 bits (116), Expect = 4e-05 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 7/144 (4%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D+ S D LSLYL Sbjct: 485 VKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLL 544 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038 L + ++ + +K SIL+ K + S F G WG+ F+ L D Sbjct: 545 LVSCNKSEVRAK----FKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 600 Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 601 ANGLLPEDKLTIFCEVSVVADSVN 624
>Q6P8B3:SPOP_XENTR Speckle-type POZ protein - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 374 Score = 48.5 bits (114), Expect = 7e-05 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D+ S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035 L + + + +K SIL+ K G+ A F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144 Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 145 EANGLLPDDKLTLFCEVSVVQDSVN 169
>Q5NVK7:SPOP_PONPY Speckle-type POZ protein - Pongo pygmaeus (Orangutan)| Length = 374 Score = 48.5 bits (114), Expect = 7e-05 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D+ S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035 L + + + +K SIL+ K G+ A F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144 Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 145 EANGLLPDDKLTLFCEVSVVQDSVN 169
>Q6ZWS8:SPOP_MOUSE Speckle-type POZ protein - Mus musculus (Mouse)| Length = 374 Score = 48.5 bits (114), Expect = 7e-05 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D+ S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035 L + + + +K SIL+ K G+ A F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144 Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 145 EANGLLPDDKLTLFCEVSVVQDSVN 169
>O43791:SPOP_HUMAN Speckle-type POZ protein - Homo sapiens (Human)| Length = 374 Score = 48.5 bits (114), Expect = 7e-05 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D+ S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035 L + + + +K SIL+ K G+ A F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144 Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 145 EANGLLPDDKLTLFCEVSVVQDSVN 169
>Q7T330:SPOP_DANRE Speckle-type POZ protein - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 374 Score = 48.5 bits (114), Expect = 7e-05 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D+ S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035 L + + + +K SIL+ K G+ A F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144 Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 145 EANGLLPDDKLTLFCEVSVVQDSVN 169
>Q0VCW1:SPOP_BOVIN Speckle-type POZ protein - Bos taurus (Bovine)| Length = 374 Score = 48.5 bits (114), Expect = 7e-05 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D+ S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035 L + + + +K SIL+ K G+ A F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144 Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 145 EANGLLPDDKLTLFCEVSVVQDSVN 169
>Q0IHH9:SPOPB_XENLA Speckle-type POZ protein B - Xenopus laevis (African clawed frog)| Length = 374 Score = 48.5 bits (114), Expect = 7e-05 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D+ S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035 L + + + +K SIL+ K G+ A F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144 Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 145 EANGLLPDDKLTLFCEVSVVQDSVN 169
>Q7ZX06:SPOPA_XENLA Speckle-type POZ protein A - Xenopus laevis (African clawed frog)| Length = 374 Score = 48.5 bits (114), Expect = 7e-05 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D+ S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035 L + + + +K SIL+ K G+ A F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144 Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 145 EANGLLPDDKLTLFCEVSVVQDSVN 169
>A0JMG1:SPOLB_DANRE Speckle-type POZ protein-like B - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 380 Score = 46.6 bits (109), Expect = 3e-04 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 7/144 (4%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ V S TF G + KW +++ P+G D S D LSLYL Sbjct: 18 VKFSYMWTINNFSFCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL 77 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038 L + + + +K S+L+ K + S F G WG+ F+ L D Sbjct: 78 LVSCPKSEVRAK----FKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 133 Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 134 ANGLLPDDKLTLFCEVSVVQDSVN 157
>Q2M2N2:SPOPL_MOUSE Speckle-type POZ protein-like - Mus musculus (Mouse)| Length = 392 Score = 45.8 bits (107), Expect = 5e-04 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 7/144 (4%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038 L + + + +K S+L+ K + S F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSLLNDKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 145 Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 146 ANGLLPDDKLTLFCEVSVVQDSVN 169
>Q5BL35:SPOLA_DANRE Speckle-type POZ protein-like A - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 392 Score = 45.4 bits (106), Expect = 6e-04 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 7/144 (4%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G + KW +++ P+G D S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038 L + + + +K S+L+ K + S F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 145 Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 146 ANGLLPDDKLTLFCEVSVVQDSVN 169
>P11467:DG17_DICDI Protein DG17 - Dictyostelium discoideum (Slime mold)| Length = 458 Score = 45.4 bits (106), Expect = 6e-04 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Frame = +1 Query: 718 WNIDNFLELDLDHFVC----SPTFEVGGHKWYVQMYPRGDKHSTDCLSLYLRLDASDELH 885 W I N+ + C SP + H + V +YP+GD++ + +SLYLR++ +E + Sbjct: 322 WIISNYSSVAKSKLNCQALSSPMLSILSHLFQVCVYPKGDENK-EYISLYLRVNNIEEPN 380 Query: 886 LESKKVIVMTLSILDQKNGKHLTATSGLL-VFTGGHGWGWADFLGLKKLKDPSGGYV 1053 + +++LD+ K +T VF GWGW FL L L + G++ Sbjct: 381 SLKVEYSFTLVNVLDKS--KSITKKEDKKRVFISSEGWGWGKFL-LSDLINKENGWL 434
>Q6GR09:SPOPL_XENLA Speckle-type POZ protein-like - Xenopus laevis (African clawed frog)| Length = 392 Score = 44.7 bits (104), Expect = 0.001 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 7/144 (4%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F + + S +F G + KW +++ P+G D S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREETGEVLKSSSFSSGPNDKLKWCLRVNPKGLDDESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038 L + + + +K S+L+ KN + S F G WG+ ++ L D Sbjct: 90 LVSCPKNEVRAK----FKFSLLNSKNEETKAMESQRAYRFVQGKDWGFKKYIRRDFLLDE 145 Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ SI+ Sbjct: 146 ANGLLPDDKLTLYCEVSVVQDSIN 169
>Q6IQ16:SPOPL_HUMAN Speckle-type POZ protein-like - Homo sapiens (Human)| Length = 392 Score = 44.7 bits (104), Expect = 0.001 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 7/144 (4%) Frame = +1 Query: 700 VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861 VK +Y W I+N F ++ + S TF G KW +++ P+G D S D LSLYL Sbjct: 30 VKFSYMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYLL 89 Query: 862 LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038 L + + + +K S+L+ K + S F G WG+ F+ L D Sbjct: 90 LVSCPKSEVRAK----FKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 145 Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110 + G + + ++++ S++ Sbjct: 146 ANGLLPDDKLTLFCEVSVVQDSVN 169
>Q09879:UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 5 -| Schizosaccharomyces pombe (Fission yeast) Length = 1108 Score = 40.0 bits (92), Expect = 0.025 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 8/123 (6%) Frame = +1 Query: 685 QKKGFVKGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPRGDKHSTDCLSLYLRL 864 ++ GF + +TW+I ++ ELD SP F VG ++ + +P+G S S++L Sbjct: 51 EESGFQR--FTWHIKSWHELD--RRAVSPQFAVGSRQFKITYFPQGTLQSAGFTSIFLEY 106 Query: 865 DASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGH--------GWGWADFLGL 1020 S+E L +K + + K L V H WG+ F L Sbjct: 107 IPSEEEKLSNKYGCCCQFAFVISNPRK-----PSLSVANSAHCRFSPEIVDWGFTQFAEL 161 Query: 1021 KKL 1029 KKL Sbjct: 162 KKL 164
>P50101:UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1230 Score = 37.7 bits (86), Expect = 0.13 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 17/133 (12%) Frame = +1 Query: 700 VKGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPRGDKHSTDCLSLYLRLDASDE 879 ++ ++TWNI ++ EL + SP F +G +W + ++P+G+ + +++YL ++ Sbjct: 38 LEDSFTWNIPDWNELTNPKYN-SPRFRIGDFEWDILLFPQGNHNKG--VAVYLEPHPEEK 94 Query: 880 LHLESKKVIVM----------TLSILDQKNGKHLTATSGLLVFTGGH-------GWGWAD 1008 L + +++ + + I NG + L+ H WG+A+ Sbjct: 95 LDETTGEMVPVDPDWYCCAQFAIGISRPGNGDTIN-----LINKSHHRFNALDTDWGFAN 149 Query: 1009 FLGLKKLKDPSGG 1047 + L LK PS G Sbjct: 150 LIDLNNLKHPSKG 162
>P41886:BAT41_CAEEL BTB and MATH domain-containing protein 41 - Caenorhabditis elegans| Length = 418 Score = 36.2 bits (82), Expect = 0.37 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 6/136 (4%) Frame = +1 Query: 709 TYTWNIDNF-LELDLDH---FVCSPTFEVGGHKWYVQMYPRG-DKHSTDCLSLYLRLDAS 873 T W+++ F ++L+L + F+ +P F G +++ ++++P G D+ + LSL+L ++ Sbjct: 47 TNYWSVERFTVQLELHNPAEFMLAPKFGDGDYEFVMKLFPNGKDEETAGYLSLFLLINKC 106 Query: 874 DELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWAD-FLGLKKLKDPSGGY 1050 L + + T+ D HL LV G A F L L+ Y Sbjct: 107 PNPRLRFR--VSFTVETADGPRSCHLNKN---LVTINRSGIVTASKFFSLDILRSAMNVY 161 Query: 1051 VVGSSCIMKADLTIFG 1098 + + +LTIFG Sbjct: 162 IPNDILTIGCELTIFG 177
>Q4KL13:CN028_MOUSE Uncharacterized protein C14orf28 homolog - Mus musculus (Mouse)| Length = 310 Score = 33.1 bits (74), Expect = 3.1 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = +3 Query: 414 HGACCF*VVNIQPFK-RNVLWMQSYLQLSFQEYLLEGALL 530 HGA F V+N+Q +K ++ ++ YL LS +YLLEGA L Sbjct: 219 HGAPPFVVLNMQHWKPEDLAYVPYYLDLSDHKYLLEGATL 258
>Q4W4Y0:CN028_HUMAN Uncharacterized protein C14orf28 - Homo sapiens (Human)| Length = 310 Score = 33.1 bits (74), Expect = 3.1 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = +3 Query: 414 HGACCF*VVNIQPFK-RNVLWMQSYLQLSFQEYLLEGALL 530 HGA F V+N+Q +K ++ ++ YL LS +YLLEGA L Sbjct: 219 HGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATL 258
>Q2KIN3:CN028_BOVIN Uncharacterized protein C14orf28 homolog - Bos taurus (Bovine)| Length = 280 Score = 33.1 bits (74), Expect = 3.1 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = +3 Query: 414 HGACCF*VVNIQPFK-RNVLWMQSYLQLSFQEYLLEGALL 530 HGA F V+N+Q +K ++ ++ YL LS +YLLEGA L Sbjct: 189 HGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATL 228
>Q06SH2:YCF78_STIHE Uncharacterized membrane protein ycf78 - Stigeoclonium helveticum| (Green alga) Length = 3707 Score = 32.3 bits (72), Expect = 5.3 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = -3 Query: 980 VNTKRPEVAVKCFPFFWSRMDRVITITFLDSRWSSSEASRRK-YKLRQSVLCLSPRGYIC 804 +N + E V FP +++++ +++SSS +R+ YKLRQ +S R Y Sbjct: 3378 INGNKSEAEVSAFPLIKEYLNQLVNTN--KNKFSSSRVFKRRFYKLRQLSYTMSLRLYDR 3435 Query: 803 TYHLCPPTSNVGEQT 759 + T N GEQ+ Sbjct: 3436 WFFYYYKTGNSGEQS 3450
>O14559:TCGAP_HUMAN TC10/CDC42 GTPase-activating protein - Homo sapiens (Human)| Length = 1287 Score = 32.3 bits (72), Expect = 5.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 15 QTKLRQRRGTPQAPVLPVRPQNPEEKRREEEGQ 113 Q + + R GTP P P P +P E+R+ E G+ Sbjct: 549 QARTQGRLGTPTEPTTPKAPASPAERRKGERGE 581
>Q4VSI4:UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 - Rattus norvegicus (Rat)| Length = 1103 Score = 32.3 bits (72), Expect = 5.3 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 2/119 (1%) Frame = +1 Query: 703 KGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPR--GDKHSTDCLSLYLRLDASD 876 + T+ + ++ F L V SP V W + + PR D+ + +L+ +A Sbjct: 69 EATFQFTVERFSRLS--ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAES 126 Query: 877 ELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWADFLGLKKLKDPSGGYV 1053 + S + I + + K + L F + WG+++F+ ++ DP G++ Sbjct: 127 DSTSWSCHAQAVLKIINYRDDDKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFI 185
>Q6A4J8:UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 - Mus musculus (Mouse)| Length = 1103 Score = 32.3 bits (72), Expect = 5.3 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 2/119 (1%) Frame = +1 Query: 703 KGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPR--GDKHSTDCLSLYLRLDASD 876 + T+ + ++ F L V SP V W + + PR D+ + +L+ +A Sbjct: 69 EATFQFTVERFSRLS--ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAES 126 Query: 877 ELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWADFLGLKKLKDPSGGYV 1053 + S + I + + K + L F + WG+++F+ ++ DP G++ Sbjct: 127 DSTSWSCHAQAVLKIINYRDDDKSFSRRISHLFFHEENDWGFSNFMAWSEVTDPEKGFI 185
>Q9NWB6:U430_HUMAN UPF0430 protein - Homo sapiens (Human)| Length = 273 Score = 32.3 bits (72), Expect = 5.3 Identities = 22/64 (34%), Positives = 29/64 (45%) Frame = +1 Query: 19 RS*DRGEEHLRLRYSQSAPKIQRRREEKRKGRSMGNCKSSSRALRGKAHVVPDSEWRMQD 198 RS R +E +R R K RRRE + + RS S R +A PD R+ Sbjct: 28 RSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPD---RIDI 84 Query: 199 FGKT 210 FG+T Sbjct: 85 FGRT 88
>Q2TA42:U430_BOVIN UPF0430 protein - Bos taurus (Bovine)| Length = 273 Score = 32.3 bits (72), Expect = 5.3 Identities = 22/64 (34%), Positives = 29/64 (45%) Frame = +1 Query: 19 RS*DRGEEHLRLRYSQSAPKIQRRREEKRKGRSMGNCKSSSRALRGKAHVVPDSEWRMQD 198 RS R +E +R R K RRRE + + RS S R +A PD R+ Sbjct: 28 RSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPD---RIDI 84 Query: 199 FGKT 210 FG+T Sbjct: 85 FGRT 88
>Q04542:COAT_SOUV3 Capsid protein - Southampton virus (SHV)| Length = 546 Score = 32.3 bits (72), Expect = 5.3 Identities = 15/55 (27%), Positives = 30/55 (54%) Frame = +1 Query: 310 NWYLKVNPVRKETGSETPYVALSLMTSRASMMPGHTVHVVFELSIYNHSKGMYCG 474 +W+++++ TGS P ++S+ T+ +P H + F+ ++NH G Y G Sbjct: 330 DWHMRISKTPNNTGSGDPMRSVSVQTNVQGFVP-HLGSIQFD-EVFNHPTGDYIG 382
>Q93009:UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 - Homo sapiens (Human)| Length = 1102 Score = 32.0 bits (71), Expect = 6.9 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 2/119 (1%) Frame = +1 Query: 703 KGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPR--GDKHSTDCLSLYLRLDASD 876 + T+ + ++ F L V SP V W + + PR D+ + +L+ +A Sbjct: 68 EATFQFTVERFSRLS--ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAES 125 Query: 877 ELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWADFLGLKKLKDPSGGYV 1053 + S + I + + K + L F + WG+++F+ ++ DP G++ Sbjct: 126 DSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFI 184
>Q6U7I1:UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 - Gallus gallus (Chicken)| Length = 1101 Score = 31.6 bits (70), Expect = 9.0 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 2/119 (1%) Frame = +1 Query: 703 KGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPR--GDKHSTDCLSLYLRLDASD 876 + T+ + ++ F L V SP V W + + PR D+ + +L+ +A Sbjct: 68 EATFQFTVERFNRLS--ESVLSPPCFVRNLPWKIMVMPRLYPDRPHQKSVGFFLQCNAES 125 Query: 877 ELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWADFLGLKKLKDPSGGYV 1053 + S + I + + K + L F + WG+++F+ ++ DP G++ Sbjct: 126 DSTSWSCHAQAVLKIINYKDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFI 184 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 277,630,907 Number of extensions: 6465757 Number of successful extensions: 16625 Number of sequences better than 10.0: 30 Number of HSP's gapped: 16601 Number of HSP's successfully gapped: 30 Length of query: 496 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 379 Effective length of database: 68,593,924 Effective search space: 25997097196 Effective search space used: 25997097196 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)