ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf73j05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9VFP2:RDX_DROME Protein roadkill - Drosophila melanogaster (Fru... 49 4e-05
2Q6P8B3:SPOP_XENTR Speckle-type POZ protein - Xenopus tropicalis ... 49 7e-05
3Q5NVK7:SPOP_PONPY Speckle-type POZ protein - Pongo pygmaeus (Ora... 49 7e-05
4Q6ZWS8:SPOP_MOUSE Speckle-type POZ protein - Mus musculus (Mouse) 49 7e-05
5O43791:SPOP_HUMAN Speckle-type POZ protein - Homo sapiens (Human) 49 7e-05
6Q7T330:SPOP_DANRE Speckle-type POZ protein - Danio rerio (Zebraf... 49 7e-05
7Q0VCW1:SPOP_BOVIN Speckle-type POZ protein - Bos taurus (Bovine) 49 7e-05
8Q0IHH9:SPOPB_XENLA Speckle-type POZ protein B - Xenopus laevis (... 49 7e-05
9Q7ZX06:SPOPA_XENLA Speckle-type POZ protein A - Xenopus laevis (... 49 7e-05
10A0JMG1:SPOLB_DANRE Speckle-type POZ protein-like B - Danio rerio... 47 3e-04
11Q2M2N2:SPOPL_MOUSE Speckle-type POZ protein-like - Mus musculus ... 46 5e-04
12Q5BL35:SPOLA_DANRE Speckle-type POZ protein-like A - Danio rerio... 45 6e-04
13P11467:DG17_DICDI Protein DG17 - Dictyostelium discoideum (Slime... 45 6e-04
14Q6GR09:SPOPL_XENLA Speckle-type POZ protein-like - Xenopus laevi... 45 0.001
15Q6IQ16:SPOPL_HUMAN Speckle-type POZ protein-like - Homo sapiens ... 45 0.001
16Q09879:UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase... 40 0.025
17P50101:UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 - Sa... 38 0.13
18P41886:BAT41_CAEEL BTB and MATH domain-containing protein 41 - C... 36 0.37
19Q4KL13:CN028_MOUSE Uncharacterized protein C14orf28 homolog - Mu... 33 3.1
20Q4W4Y0:CN028_HUMAN Uncharacterized protein C14orf28 - Homo sapie... 33 3.1
21Q2KIN3:CN028_BOVIN Uncharacterized protein C14orf28 homolog - Bo... 33 3.1
22Q06SH2:YCF78_STIHE Uncharacterized membrane protein ycf78 - Stig... 32 5.3
23O14559:TCGAP_HUMAN TC10/CDC42 GTPase-activating protein - Homo s... 32 5.3
24Q4VSI4:UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 - Rattus... 32 5.3
25Q6A4J8:UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 - Mus ... 32 5.3
26Q9NWB6:U430_HUMAN UPF0430 protein - Homo sapiens (Human) 32 5.3
27Q2TA42:U430_BOVIN UPF0430 protein - Bos taurus (Bovine) 32 5.3
28Q04542:COAT_SOUV3 Capsid protein - Southampton virus (SHV) 32 5.3
29Q93009:UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 - Homo... 32 6.9
30Q6U7I1:UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 - Gall... 32 9.0

>Q9VFP2:RDX_DROME Protein roadkill - Drosophila melanogaster (Fruit fly)|
          Length = 829
 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D+ S D LSLYL 
Sbjct: 485  VKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLL 544

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038
            L + ++  + +K       SIL+ K  +     S     F  G  WG+  F+    L D 
Sbjct: 545  LVSCNKSEVRAK----FKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 600

Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110
            + G +      +  ++++   S++
Sbjct: 601  ANGLLPEDKLTIFCEVSVVADSVN 624



to top

>Q6P8B3:SPOP_XENTR Speckle-type POZ protein - Xenopus tropicalis (Western clawed frog)|
            (Silurana tropicalis)
          Length = 374

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D+ S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035
            L +  +  + +K       SIL+ K G+   A        F  G  WG+  F+    L D
Sbjct: 90   LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144

Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110
             + G +      +  ++++   S++
Sbjct: 145  EANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>Q5NVK7:SPOP_PONPY Speckle-type POZ protein - Pongo pygmaeus (Orangutan)|
          Length = 374

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D+ S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035
            L +  +  + +K       SIL+ K G+   A        F  G  WG+  F+    L D
Sbjct: 90   LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144

Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110
             + G +      +  ++++   S++
Sbjct: 145  EANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>Q6ZWS8:SPOP_MOUSE Speckle-type POZ protein - Mus musculus (Mouse)|
          Length = 374

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D+ S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035
            L +  +  + +K       SIL+ K G+   A        F  G  WG+  F+    L D
Sbjct: 90   LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144

Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110
             + G +      +  ++++   S++
Sbjct: 145  EANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>O43791:SPOP_HUMAN Speckle-type POZ protein - Homo sapiens (Human)|
          Length = 374

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D+ S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035
            L +  +  + +K       SIL+ K G+   A        F  G  WG+  F+    L D
Sbjct: 90   LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144

Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110
             + G +      +  ++++   S++
Sbjct: 145  EANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>Q7T330:SPOP_DANRE Speckle-type POZ protein - Danio rerio (Zebrafish) (Brachydanio|
            rerio)
          Length = 374

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D+ S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035
            L +  +  + +K       SIL+ K G+   A        F  G  WG+  F+    L D
Sbjct: 90   LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144

Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110
             + G +      +  ++++   S++
Sbjct: 145  EANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>Q0VCW1:SPOP_BOVIN Speckle-type POZ protein - Bos taurus (Bovine)|
          Length = 374

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D+ S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035
            L +  +  + +K       SIL+ K G+   A        F  G  WG+  F+    L D
Sbjct: 90   LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144

Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110
             + G +      +  ++++   S++
Sbjct: 145  EANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>Q0IHH9:SPOPB_XENLA Speckle-type POZ protein B - Xenopus laevis (African clawed frog)|
          Length = 374

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D+ S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035
            L +  +  + +K       SIL+ K G+   A        F  G  WG+  F+    L D
Sbjct: 90   LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144

Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110
             + G +      +  ++++   S++
Sbjct: 145  EANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>Q7ZX06:SPOPA_XENLA Speckle-type POZ protein A - Xenopus laevis (African clawed frog)|
          Length = 374

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D+ S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV--FTGGHGWGWADFLGLKKLKD 1035
            L +  +  + +K       SIL+ K G+   A        F  G  WG+  F+    L D
Sbjct: 90   LVSCPKSEVRAK----FKFSILNAK-GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144

Query: 1036 PSGGYVVGSSCIMKADLTIFGSSID 1110
             + G +      +  ++++   S++
Sbjct: 145  EANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>A0JMG1:SPOLB_DANRE Speckle-type POZ protein-like B - Danio rerio (Zebrafish)|
            (Brachydanio rerio)
          Length = 380

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   V S TF  G +   KW +++ P+G D  S D LSLYL 
Sbjct: 18   VKFSYMWTINNFSFCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL 77

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038
            L +  +  + +K       S+L+ K  +     S     F  G  WG+  F+    L D 
Sbjct: 78   LVSCPKSEVRAK----FKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 133

Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110
            + G +      +  ++++   S++
Sbjct: 134  ANGLLPDDKLTLFCEVSVVQDSVN 157



to top

>Q2M2N2:SPOPL_MOUSE Speckle-type POZ protein-like - Mus musculus (Mouse)|
          Length = 392

 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D  S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038
            L +  +  + +K       S+L+ K  +     S     F  G  WG+  F+    L D 
Sbjct: 90   LVSCPKSEVRAK----FKFSLLNDKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 145

Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110
            + G +      +  ++++   S++
Sbjct: 146  ANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>Q5BL35:SPOLA_DANRE Speckle-type POZ protein-like A - Danio rerio (Zebrafish)|
            (Brachydanio rerio)
          Length = 392

 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G +   KW +++ P+G D  S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038
            L +  +  + +K       S+L+ K  +     S     F  G  WG+  F+    L D 
Sbjct: 90   LVSCPKSEVRAK----FKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 145

Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110
            + G +      +  ++++   S++
Sbjct: 146  ANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>P11467:DG17_DICDI Protein DG17 - Dictyostelium discoideum (Slime mold)|
          Length = 458

 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
 Frame = +1

Query: 718  WNIDNFLELDLDHFVC----SPTFEVGGHKWYVQMYPRGDKHSTDCLSLYLRLDASDELH 885
            W I N+  +      C    SP   +  H + V +YP+GD++  + +SLYLR++  +E +
Sbjct: 322  WIISNYSSVAKSKLNCQALSSPMLSILSHLFQVCVYPKGDENK-EYISLYLRVNNIEEPN 380

Query: 886  LESKKVIVMTLSILDQKNGKHLTATSGLL-VFTGGHGWGWADFLGLKKLKDPSGGYV 1053
                +     +++LD+   K +T       VF    GWGW  FL L  L +   G++
Sbjct: 381  SLKVEYSFTLVNVLDKS--KSITKKEDKKRVFISSEGWGWGKFL-LSDLINKENGWL 434



to top

>Q6GR09:SPOPL_XENLA Speckle-type POZ protein-like - Xenopus laevis (African clawed frog)|
          Length = 392

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   +    + S +F  G +   KW +++ P+G D  S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREETGEVLKSSSFSSGPNDKLKWCLRVNPKGLDDESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038
            L +  +  + +K       S+L+ KN +     S     F  G  WG+  ++    L D 
Sbjct: 90   LVSCPKNEVRAK----FKFSLLNSKNEETKAMESQRAYRFVQGKDWGFKKYIRRDFLLDE 145

Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110
            + G +      +  ++++   SI+
Sbjct: 146  ANGLLPDDKLTLYCEVSVVQDSIN 169



to top

>Q6IQ16:SPOPL_HUMAN Speckle-type POZ protein-like - Homo sapiens (Human)|
          Length = 392

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
 Frame = +1

Query: 700  VKGTYTWNIDN--FLELDLDHFVCSPTFEVGGH---KWYVQMYPRG-DKHSTDCLSLYLR 861
            VK +Y W I+N  F   ++   + S TF  G     KW +++ P+G D  S D LSLYL 
Sbjct: 30   VKFSYMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYLL 89

Query: 862  LDASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLV-FTGGHGWGWADFLGLKKLKDP 1038
            L +  +  + +K       S+L+ K  +     S     F  G  WG+  F+    L D 
Sbjct: 90   LVSCPKSEVRAK----FKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDE 145

Query: 1039 SGGYVVGSSCIMKADLTIFGSSID 1110
            + G +      +  ++++   S++
Sbjct: 146  ANGLLPDDKLTLFCEVSVVQDSVN 169



to top

>Q09879:UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 5 -|
            Schizosaccharomyces pombe (Fission yeast)
          Length = 1108

 Score = 40.0 bits (92), Expect = 0.025
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
 Frame = +1

Query: 685  QKKGFVKGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPRGDKHSTDCLSLYLRL 864
            ++ GF +  +TW+I ++ ELD      SP F VG  ++ +  +P+G   S    S++L  
Sbjct: 51   EESGFQR--FTWHIKSWHELD--RRAVSPQFAVGSRQFKITYFPQGTLQSAGFTSIFLEY 106

Query: 865  DASDELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGH--------GWGWADFLGL 1020
              S+E  L +K       + +     K       L V    H         WG+  F  L
Sbjct: 107  IPSEEEKLSNKYGCCCQFAFVISNPRK-----PSLSVANSAHCRFSPEIVDWGFTQFAEL 161

Query: 1021 KKL 1029
            KKL
Sbjct: 162  KKL 164



to top

>P50101:UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 1230

 Score = 37.7 bits (86), Expect = 0.13
 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 17/133 (12%)
 Frame = +1

Query: 700  VKGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPRGDKHSTDCLSLYLRLDASDE 879
            ++ ++TWNI ++ EL    +  SP F +G  +W + ++P+G+ +    +++YL     ++
Sbjct: 38   LEDSFTWNIPDWNELTNPKYN-SPRFRIGDFEWDILLFPQGNHNKG--VAVYLEPHPEEK 94

Query: 880  LHLESKKVIVM----------TLSILDQKNGKHLTATSGLLVFTGGH-------GWGWAD 1008
            L   + +++ +           + I    NG  +      L+    H        WG+A+
Sbjct: 95   LDETTGEMVPVDPDWYCCAQFAIGISRPGNGDTIN-----LINKSHHRFNALDTDWGFAN 149

Query: 1009 FLGLKKLKDPSGG 1047
             + L  LK PS G
Sbjct: 150  LIDLNNLKHPSKG 162



to top

>P41886:BAT41_CAEEL BTB and MATH domain-containing protein 41 - Caenorhabditis elegans|
          Length = 418

 Score = 36.2 bits (82), Expect = 0.37
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
 Frame = +1

Query: 709  TYTWNIDNF-LELDLDH---FVCSPTFEVGGHKWYVQMYPRG-DKHSTDCLSLYLRLDAS 873
            T  W+++ F ++L+L +   F+ +P F  G +++ ++++P G D+ +   LSL+L ++  
Sbjct: 47   TNYWSVERFTVQLELHNPAEFMLAPKFGDGDYEFVMKLFPNGKDEETAGYLSLFLLINKC 106

Query: 874  DELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWAD-FLGLKKLKDPSGGY 1050
                L  +  +  T+   D     HL      LV     G   A  F  L  L+     Y
Sbjct: 107  PNPRLRFR--VSFTVETADGPRSCHLNKN---LVTINRSGIVTASKFFSLDILRSAMNVY 161

Query: 1051 VVGSSCIMKADLTIFG 1098
            +      +  +LTIFG
Sbjct: 162  IPNDILTIGCELTIFG 177



to top

>Q4KL13:CN028_MOUSE Uncharacterized protein C14orf28 homolog - Mus musculus (Mouse)|
          Length = 310

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +3

Query: 414 HGACCF*VVNIQPFK-RNVLWMQSYLQLSFQEYLLEGALL 530
           HGA  F V+N+Q +K  ++ ++  YL LS  +YLLEGA L
Sbjct: 219 HGAPPFVVLNMQHWKPEDLAYVPYYLDLSDHKYLLEGATL 258



to top

>Q4W4Y0:CN028_HUMAN Uncharacterized protein C14orf28 - Homo sapiens (Human)|
          Length = 310

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +3

Query: 414 HGACCF*VVNIQPFK-RNVLWMQSYLQLSFQEYLLEGALL 530
           HGA  F V+N+Q +K  ++ ++  YL LS  +YLLEGA L
Sbjct: 219 HGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATL 258



to top

>Q2KIN3:CN028_BOVIN Uncharacterized protein C14orf28 homolog - Bos taurus (Bovine)|
          Length = 280

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +3

Query: 414 HGACCF*VVNIQPFK-RNVLWMQSYLQLSFQEYLLEGALL 530
           HGA  F V+N+Q +K  ++ ++  YL LS  +YLLEGA L
Sbjct: 189 HGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATL 228



to top

>Q06SH2:YCF78_STIHE Uncharacterized membrane protein ycf78 - Stigeoclonium helveticum|
            (Green alga)
          Length = 3707

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -3

Query: 980  VNTKRPEVAVKCFPFFWSRMDRVITITFLDSRWSSSEASRRK-YKLRQSVLCLSPRGYIC 804
            +N  + E  V  FP     +++++      +++SSS   +R+ YKLRQ    +S R Y  
Sbjct: 3378 INGNKSEAEVSAFPLIKEYLNQLVNTN--KNKFSSSRVFKRRFYKLRQLSYTMSLRLYDR 3435

Query: 803  TYHLCPPTSNVGEQT 759
             +     T N GEQ+
Sbjct: 3436 WFFYYYKTGNSGEQS 3450



to top

>O14559:TCGAP_HUMAN TC10/CDC42 GTPase-activating protein - Homo sapiens (Human)|
          Length = 1287

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 15  QTKLRQRRGTPQAPVLPVRPQNPEEKRREEEGQ 113
           Q + + R GTP  P  P  P +P E+R+ E G+
Sbjct: 549 QARTQGRLGTPTEPTTPKAPASPAERRKGERGE 581



to top

>Q4VSI4:UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 - Rattus norvegicus (Rat)|
          Length = 1103

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
 Frame = +1

Query: 703  KGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPR--GDKHSTDCLSLYLRLDASD 876
            + T+ + ++ F  L     V SP   V    W + + PR   D+     +  +L+ +A  
Sbjct: 69   EATFQFTVERFSRLS--ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAES 126

Query: 877  ELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWADFLGLKKLKDPSGGYV 1053
            +    S     +   I  + + K  +     L F   + WG+++F+   ++ DP  G++
Sbjct: 127  DSTSWSCHAQAVLKIINYRDDDKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFI 185



to top

>Q6A4J8:UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 - Mus musculus (Mouse)|
          Length = 1103

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
 Frame = +1

Query: 703  KGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPR--GDKHSTDCLSLYLRLDASD 876
            + T+ + ++ F  L     V SP   V    W + + PR   D+     +  +L+ +A  
Sbjct: 69   EATFQFTVERFSRLS--ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAES 126

Query: 877  ELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWADFLGLKKLKDPSGGYV 1053
            +    S     +   I  + + K  +     L F   + WG+++F+   ++ DP  G++
Sbjct: 127  DSTSWSCHAQAVLKIINYRDDDKSFSRRISHLFFHEENDWGFSNFMAWSEVTDPEKGFI 185



to top

>Q9NWB6:U430_HUMAN UPF0430 protein - Homo sapiens (Human)|
          Length = 273

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = +1

Query: 19  RS*DRGEEHLRLRYSQSAPKIQRRREEKRKGRSMGNCKSSSRALRGKAHVVPDSEWRMQD 198
           RS  R +E +R R      K  RRRE + + RS     S     R +A   PD   R+  
Sbjct: 28  RSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPD---RIDI 84

Query: 199 FGKT 210
           FG+T
Sbjct: 85  FGRT 88



to top

>Q2TA42:U430_BOVIN UPF0430 protein - Bos taurus (Bovine)|
          Length = 273

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = +1

Query: 19  RS*DRGEEHLRLRYSQSAPKIQRRREEKRKGRSMGNCKSSSRALRGKAHVVPDSEWRMQD 198
           RS  R +E +R R      K  RRRE + + RS     S     R +A   PD   R+  
Sbjct: 28  RSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPD---RIDI 84

Query: 199 FGKT 210
           FG+T
Sbjct: 85  FGRT 88



to top

>Q04542:COAT_SOUV3 Capsid protein - Southampton virus (SHV)|
          Length = 546

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +1

Query: 310 NWYLKVNPVRKETGSETPYVALSLMTSRASMMPGHTVHVVFELSIYNHSKGMYCG 474
           +W+++++     TGS  P  ++S+ T+    +P H   + F+  ++NH  G Y G
Sbjct: 330 DWHMRISKTPNNTGSGDPMRSVSVQTNVQGFVP-HLGSIQFD-EVFNHPTGDYIG 382



to top

>Q93009:UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 - Homo sapiens (Human)|
          Length = 1102

 Score = 32.0 bits (71), Expect = 6.9
 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
 Frame = +1

Query: 703  KGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPR--GDKHSTDCLSLYLRLDASD 876
            + T+ + ++ F  L     V SP   V    W + + PR   D+     +  +L+ +A  
Sbjct: 68   EATFQFTVERFSRLS--ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAES 125

Query: 877  ELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWADFLGLKKLKDPSGGYV 1053
            +    S     +   I  + + K  +     L F   + WG+++F+   ++ DP  G++
Sbjct: 126  DSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFI 184



to top

>Q6U7I1:UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 - Gallus gallus (Chicken)|
          Length = 1101

 Score = 31.6 bits (70), Expect = 9.0
 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
 Frame = +1

Query: 703  KGTYTWNIDNFLELDLDHFVCSPTFEVGGHKWYVQMYPR--GDKHSTDCLSLYLRLDASD 876
            + T+ + ++ F  L     V SP   V    W + + PR   D+     +  +L+ +A  
Sbjct: 68   EATFQFTVERFNRLS--ESVLSPPCFVRNLPWKIMVMPRLYPDRPHQKSVGFFLQCNAES 125

Query: 877  ELHLESKKVIVMTLSILDQKNGKHLTATSGLLVFTGGHGWGWADFLGLKKLKDPSGGYV 1053
            +    S     +   I  + + K  +     L F   + WG+++F+   ++ DP  G++
Sbjct: 126  DSTSWSCHAQAVLKIINYKDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFI 184


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 277,630,907
Number of extensions: 6465757
Number of successful extensions: 16625
Number of sequences better than 10.0: 30
Number of HSP's gapped: 16601
Number of HSP's successfully gapped: 30
Length of query: 496
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 379
Effective length of database: 68,593,924
Effective search space: 25997097196
Effective search space used: 25997097196
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top