ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf73i05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001061271.1| Oryza sativa (japonica cultivar-group) Os05g... 365 4e-97
2dbj|AK120340.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 4e-97
3dbj|AK073342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 4e-97
4gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 190 1e-44
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 190 1e-44
6gb|BT019187.1| Zea mays clone Contig858.F mRNA sequence 180 1e-41
7gb|AY110685.1| Zea mays CL9024_1 mRNA sequence 145 7e-31
8gb|BT013437.1| Lycopersicon esculentum clone 132078F, mRNA sequence 66 5e-07
9ref|NM_001048618.1| Oryza sativa (japonica cultivar-group) Os01g... 64 2e-06
10dbj|AK073728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 2e-06
11gb|AY106536.1| Zea mays PCO128034 mRNA sequence 64 2e-06
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 5e-04
13dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D... 56 5e-04
14dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 56 5e-04
15emb|CT981110.1| partial cDNA sequence from a Lambda ZAP II norma... 52 0.008
16ref|NM_201889.1| Arabidopsis thaliana protein binding / ubiquiti... 48 0.12
17ref|NM_179947.2| Arabidopsis thaliana protein binding / ubiquiti... 48 0.12
18gb|AY096670.1| Arabidopsis thaliana putative protein with C-term... 48 0.12
19gb|AY070452.1| Arabidopsis thaliana putative protein with C-term... 48 0.12
20gb|AF167428.1| Lycopersicon esculentum 1-aminocyclopropane-1-car... 48 0.12
21gb|AY007367.1| Lycopersicon esculentum tospovirus resistance pro... 48 0.12
22emb|BX819119.1|CNS0A9U7 Arabidopsis thaliana Full-length cDNA Co... 48 0.12
23gb|AY518222.1| Solanum tuberosum cultivar Desiree 14-3-3 protein... 48 0.12
24ref|NM_001068850.1| Oryza sativa (japonica cultivar-group) Os08g... 46 0.47
25gb|AC166639.2| Solanum demissum chromosome 5 clone PGEC219, comp... 46 0.47
26gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete se... 46 0.47
27gb|AY022745.1| Oryza sativa microsatellite MRG5070 containing (C... 46 0.47
28gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic... 46 0.47
29dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.47
30gb|AC155887.2| Medicago truncatula chromosome 7 BAC clone mth2-2... 46 0.47
31dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.47
32dbj|AK122011.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.47
33gb|DQ245079.1| Zea mays clone 12755 mRNA sequence 44 1.9
34emb|CU019621.10| S.lycopersicum DNA sequence from clone LE_HBa-8... 44 1.9
35ref|NM_001051222.1| Oryza sativa (japonica cultivar-group) Os01g... 44 1.9
36gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09, c... 44 1.9
37gb|AC149265.1| Solanum demissum chromosome 5 clone PGEC858M02, c... 44 1.9
38ref|XM_876350.1| PREDICTED: Bos taurus similar to Kruppel-like f... 44 1.9
39ref|XM_876283.1| PREDICTED: Bos taurus similar to Kruppel-like f... 44 1.9
40ref|XM_599092.2| PREDICTED: Bos taurus similar to Kruppel-like f... 44 1.9
41ref|XM_876162.1| PREDICTED: Bos taurus similar to Kruppel-like f... 44 1.9
42ref|XM_876099.1| PREDICTED: Bos taurus similar to Kruppel-like f... 44 1.9
43gb|AY303170.1| Solanum bulbocastanum chromosome 8 clone UW3A14, ... 44 1.9
44ref|NM_001031782.1| Sus scrofa kruppel-like factor 4 (KLF4), mRN... 44 1.9
45dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic D... 44 1.9
46dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.9
47dbj|AK060644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 1.9
48emb|Z36750.1|LJRINGP L.japonicus (Gifu B-129) mRNA for RING fing... 44 1.9
49ref|XM_764252.1| Giardia lamblia ATCC 50803 beta-actin binding p... 44 1.9
50dbj|AB018422.1| Pisum sativum mRNA for DNA binding zinc finger p... 44 1.9
51gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 44 1.9
52gb|AC171726.2| Solanum lycopersicum chromosome 1 clone C01HBa008... 42 7.3
53emb|CT832310.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 7.3
54emb|CT832309.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 7.3
55ref|NM_001060613.1| Oryza sativa (japonica cultivar-group) Os04g... 42 7.3
56emb|CU013516.2| Medicago truncatula chromosome 5 clone mte1-13o1... 42 7.3
57ref|NM_030665.3| Homo sapiens retinoic acid induced 1 (RAI1), mRNA 42 7.3
58gb|AC005370.1| Homo sapiens chromosome 5, BAC clone 193n11 (LBNL... 42 7.3
59gb|AC126675.4| Mus musculus BAC clone RP23-430P11 from chromosom... 42 7.3
60gb|AY172136.1| Homo sapiens retinoic acid induced 1 (RAI1) mRNA,... 42 7.3
61gb|AF411809.1| Lycopersicon esculentum BAC clone FW2.2, complete... 42 7.3
62gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O1... 42 7.3
63emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chr... 42 7.3
64gb|AC016825.12| Homo sapiens chromosome 10 clone RP11-498B4, com... 42 7.3
65gb|AC006260.4| Arabidopsis thaliana chromosome 2 clone T2N18 map... 42 7.3
66gb|AC104440.1| Homo sapiens chromosome 3 clone RP11-814M22, comp... 42 7.3
67emb|AL450445.6| Human DNA sequence from clone RP11-411G9 on chro... 42 7.3
68emb|AL157382.14| Human DNA sequence from clone RP13-62H24 on chr... 42 7.3
69emb|AL121903.13|HSDJ155G6 Human DNA sequence from clone RP1-155G... 42 7.3
70emb|AJ303345.1|LES303345 Lycopersicon esculentum lateral suppres... 42 7.3
71gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculen... 42 7.3
72gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Canc... 42 7.3
73gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, comp... 42 7.3
74dbj|AK071468.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 7.3
75dbj|AK067751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 7.3
76dbj|AP006140.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 7.3
77gb|AC010489.4|AC010489 Homo sapiens chromosome 5 clone CTD-2332G... 42 7.3
78emb|Y09539.1|LJRINGFIN L.japonicus gene encoding RING finger pro... 42 7.3
79emb|AJ271791.1|HSA271791 Homo sapiens partial RAI1 gene for reti... 42 7.3
80emb|AJ271790.1|HSA271790 Homo sapiens mRNA for retinoid-acid ind... 42 7.3
81gb|AC005660.3|AC005660 citb_163_g_10, complete sequence 42 7.3
82emb|BX248383.5| Mouse DNA sequence from clone RP23-63C4 on chrom... 42 7.3
83emb|CT009721.14| Mouse DNA sequence from clone RP23-130L13 on ch... 42 7.3
84gb|AF053645.1|HSCSE1G3 Homo sapiens cellular apoptosis susceptib... 42 7.3
85gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, co... 42 7.3
86gb|AC006924.3|AC006924 Homo sapiens, clone hRPK.32_A_1, complete... 42 7.3
87emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-28... 42 7.3
88gb|AC150901.2| Mus musculus BAC clone RP23-62N8 from 19, complet... 42 7.3
89emb|AL834468.1|HSM805571 Homo sapiens mRNA; cDNA DKFZp762L0710 (... 42 7.3
90dbj|AB058723.1| Homo sapiens mRNA for KIAA1820 protein, partial cds 42 7.3

>ref|NM_001061271.1| Oryza sativa (japonica cultivar-group) Os05g0163400 (Os05g0163400)
            mRNA, complete cds
          Length = 2049
 Score =  365 bits (184), Expect = 4e-97
 Identities = 277/308 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1212 ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
            |||||||| || |||||||||    |||||||||||||||||||||||||||||||||||
Sbjct: 1327 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 1386

                                                                        
Query: 1272 tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
            |||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 1387 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 1446

                                                                        
Query: 1332 cgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctcac 1391
            || |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||||
Sbjct: 1447 cggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctcac 1506

                                                                        
Query: 1392 tgggacatgagactggacattgatgacatgagctatgaggagctcctggcgttggaagaa 1451
            |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1507 tgggacatgagactggacattgatgacatgagctatgaggagctgctggctttggaagaa 1566

                                                                        
Query: 1452 cgaataggcagtgtaaacactggcctggctgatgaaaaaatctcaggatgtgtgatggag 1511
            || ||||||  ||| ||||||||||| |||||||| ||||| || || ||||||||||||
Sbjct: 1567 cgcataggccatgtgaacactggcctcgctgatgagaaaatttctggctgtgtgatggag 1626

                    
Query: 1512 ctagcctg 1519
             |||||||
Sbjct: 1627 gtagcctg 1634



 Score =  313 bits (158), Expect = 1e-81
 Identities = 310/360 (86%), Gaps = 3/360 (0%)
 Strand = Plus / Plus

                                                                        
Query: 754  tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
            ||||||||| ||||||||| ||||| |  | |||||||| |||||||||||||||||| |
Sbjct: 758  tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 817

                                                                        
Query: 814  tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
            |||||||  | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 818  tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 877

                                                                        
Query: 874  catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
            | |||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 878  cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 937

                                                                        
Query: 934  caccagtacaacgggaaagagctcctttatctctacctcccagaattgtccccccaggga 993
            ||||||||||||| || ||||||||||||||| | | ||| |||||| | || |||||| 
Sbjct: 938  caccagtacaacgtgacagagctcctttatctgtgcatccaagaattcttcctccagggc 997

                                                                        
Query: 994  cagatggaagcaccggtatagcattcagagagaggccatactatcctgctccacagggca 1053
            | ||||| || |   | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 998  ctgatggtagta---gcatagcattcagagagaggccatactatcctgctccacagagca 1054

                                                                        
Query: 1054 ccaacataagtgcccctgtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
            ||||||||||||| ||||||||||||||||||  ||||| |||| |||||||||||||||
Sbjct: 1055 ccaacataagtgcacctgtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 1114



 Score =  214 bits (108), Expect = 9e-52
 Identities = 398/495 (80%), Gaps = 6/495 (1%)
 Strand = Plus / Plus

                                                                       
Query: 195 tgatcagactgtacatgagtcatggctgggcatcattatcacaattcccagatgtcaaga 254
           |||||||| ||| || | || |||||||| ||||| ||| | ||||||||||||||  | 
Sbjct: 208 tgatcagattgttcacgtgttatggctggacatcagtataataattcccagatgtcccgg 267

                                                                       
Query: 255 atggatcgtatgaaccagccacgtaatgaacctccgccttttggtcaaaagttatttatg 314
           ||||||| |||| ||  || |   ||||||||||| |||||||| |||||||||||||||
Sbjct: 268 atggatcatatggacaggctaaacaatgaacctccaccttttggccaaaagttatttatg 327

                                                                       
Query: 315 catcctagaggtgatgcacctaatggagcgggaccatcaggttttgggggtacaactgtg 374
           ||||||||  ||||| || |||| ||||| ||| | || || | || |||||  ||  ||
Sbjct: 328 catcctaggagtgatccagctaacggagctggatcgtctggctatgtgggtaacacaatg 387

                                                                       
Query: 375 agatctaatgaacttccatcctcaagctacactggtcagtcttatggtcagcagattgga 434
           ||||| ||||| ||||| || ||||| ||  |||| ||  ||||||||||||||| | ||
Sbjct: 388 agatcgaatgatcttccgtcttcaagttatgctggccaagcttatggtcagcagaataga 447

                                                                       
Query: 435 gcccctggaaccttgcatgcttccaatgctggttatcctcctgctggaagctctagtagc 494
           |||||      | | ||||||||  || ||||| || | |||||||||||||||||| | 
Sbjct: 448 gcccc------catccatgcttcatattctggtcatgcacctgctggaagctctagtggt 501

                                                                       
Query: 495 aactatgcaccatacaatactcaacatgtgccttctttaagctatccacatagatccgag 554
           | ||||||||||||||||||||||||| ||||| ||| ||||||||||||  ||||||||
Sbjct: 502 agctatgcaccatacaatactcaacatatgcctgcttcaagctatccacacggatccgag 561

                                                                       
Query: 555 gatagttttattcctggagtccatgtggatgacagaagggttgcaccgaagcgcagaaat 614
           |||| ||| |||||  |   ||||||||||| |||||||||||||  |||| | ||||||
Sbjct: 562 gataatttcattccaagttcccatgtggatggcagaagggttgcattgaagagaagaaat 621

                                                                       
Query: 615 cccatcactcatcctgtggatggtgtcagtgctggaggctattatcctggcagttcttcc 674
           ||||||| |||||||   |||||  || ||| ||||   |||||| ||||||||||||||
Sbjct: 622 cccatcattcatcctacagatggattcggtgttggaaattattatgctggcagttcttcc 681

                          
Query: 675 aataatcagttctct 689
           |||| ||||||||||
Sbjct: 682 aatactcagttctct 696



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 1641 tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
            |||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 1756 tgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagc 1805



 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1543 atgatcaaaacaatgaaagatgcataatttgcctggaggagtacaagcagaaggactccc 1602
            |||||||  |||||||||||||  |||| ||||||||||| ||||||||  ||||| | |
Sbjct: 1658 atgatcaggacaatgaaagatgtgtaatctgcctggaggaatacaagcatgaggacacac 1717

                            
Query: 1603 ttgggaagctgaaatg 1618
            |||||| |||||||||
Sbjct: 1718 ttgggaggctgaaatg 1733



to top

>dbj|AK120340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060N21, full
            insert sequence
          Length = 6226

 Score =  365 bits (184), Expect = 4e-97
 Identities = 277/308 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1212 ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
            |||||||| || |||||||||    |||||||||||||||||||||||||||||||||||
Sbjct: 5543 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 5602

                                                                        
Query: 1272 tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
            |||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 5603 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 5662

                                                                        
Query: 1332 cgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctcac 1391
            || |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||||
Sbjct: 5663 cggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctcac 5722

                                                                        
Query: 1392 tgggacatgagactggacattgatgacatgagctatgaggagctcctggcgttggaagaa 1451
            |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 5723 tgggacatgagactggacattgatgacatgagctatgaggagctgctggctttggaagaa 5782

                                                                        
Query: 1452 cgaataggcagtgtaaacactggcctggctgatgaaaaaatctcaggatgtgtgatggag 1511
            || ||||||  ||| ||||||||||| |||||||| ||||| || || ||||||||||||
Sbjct: 5783 cgcataggccatgtgaacactggcctcgctgatgagaaaatttctggctgtgtgatggag 5842

                    
Query: 1512 ctagcctg 1519
             |||||||
Sbjct: 5843 gtagcctg 5850



 Score =  313 bits (158), Expect = 1e-81
 Identities = 310/360 (86%), Gaps = 3/360 (0%)
 Strand = Plus / Plus

                                                                        
Query: 754  tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
            ||||||||| ||||||||| ||||| |  | |||||||| |||||||||||||||||| |
Sbjct: 4974 tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 5033

                                                                        
Query: 814  tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
            |||||||  | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 5034 tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 5093

                                                                        
Query: 874  catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
            | |||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5094 cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 5153

                                                                        
Query: 934  caccagtacaacgggaaagagctcctttatctctacctcccagaattgtccccccaggga 993
            ||||||||||||| || ||||||||||||||| | | ||| |||||| | || |||||| 
Sbjct: 5154 caccagtacaacgtgacagagctcctttatctgtgcatccaagaattcttcctccagggc 5213

                                                                        
Query: 994  cagatggaagcaccggtatagcattcagagagaggccatactatcctgctccacagggca 1053
            | ||||| || |   | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5214 ctgatggtagta---gcatagcattcagagagaggccatactatcctgctccacagagca 5270

                                                                        
Query: 1054 ccaacataagtgcccctgtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
            ||||||||||||| ||||||||||||||||||  ||||| |||| |||||||||||||||
Sbjct: 5271 ccaacataagtgcacctgtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 5330



 Score =  214 bits (108), Expect = 9e-52
 Identities = 398/495 (80%), Gaps = 6/495 (1%)
 Strand = Plus / Plus

                                                                        
Query: 195  tgatcagactgtacatgagtcatggctgggcatcattatcacaattcccagatgtcaaga 254
            |||||||| ||| || | || |||||||| ||||| ||| | ||||||||||||||  | 
Sbjct: 4424 tgatcagattgttcacgtgttatggctggacatcagtataataattcccagatgtcccgg 4483

                                                                        
Query: 255  atggatcgtatgaaccagccacgtaatgaacctccgccttttggtcaaaagttatttatg 314
            ||||||| |||| ||  || |   ||||||||||| |||||||| |||||||||||||||
Sbjct: 4484 atggatcatatggacaggctaaacaatgaacctccaccttttggccaaaagttatttatg 4543

                                                                        
Query: 315  catcctagaggtgatgcacctaatggagcgggaccatcaggttttgggggtacaactgtg 374
            ||||||||  ||||| || |||| ||||| ||| | || || | || |||||  ||  ||
Sbjct: 4544 catcctaggagtgatccagctaacggagctggatcgtctggctatgtgggtaacacaatg 4603

                                                                        
Query: 375  agatctaatgaacttccatcctcaagctacactggtcagtcttatggtcagcagattgga 434
            ||||| ||||| ||||| || ||||| ||  |||| ||  ||||||||||||||| | ||
Sbjct: 4604 agatcgaatgatcttccgtcttcaagttatgctggccaagcttatggtcagcagaataga 4663

                                                                        
Query: 435  gcccctggaaccttgcatgcttccaatgctggttatcctcctgctggaagctctagtagc 494
            |||||      | | ||||||||  || ||||| || | |||||||||||||||||| | 
Sbjct: 4664 gcccc------catccatgcttcatattctggtcatgcacctgctggaagctctagtggt 4717

                                                                        
Query: 495  aactatgcaccatacaatactcaacatgtgccttctttaagctatccacatagatccgag 554
            | ||||||||||||||||||||||||| ||||| ||| ||||||||||||  ||||||||
Sbjct: 4718 agctatgcaccatacaatactcaacatatgcctgcttcaagctatccacacggatccgag 4777

                                                                        
Query: 555  gatagttttattcctggagtccatgtggatgacagaagggttgcaccgaagcgcagaaat 614
            |||| ||| |||||  |   ||||||||||| |||||||||||||  |||| | ||||||
Sbjct: 4778 gataatttcattccaagttcccatgtggatggcagaagggttgcattgaagagaagaaat 4837

                                                                        
Query: 615  cccatcactcatcctgtggatggtgtcagtgctggaggctattatcctggcagttcttcc 674
            ||||||| |||||||   |||||  || ||| ||||   |||||| ||||||||||||||
Sbjct: 4838 cccatcattcatcctacagatggattcggtgttggaaattattatgctggcagttcttcc 4897

                           
Query: 675  aataatcagttctct 689
            |||| ||||||||||
Sbjct: 4898 aatactcagttctct 4912



 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1543 atgatcaaaacaatgaaagatgcataatttgcctggaggagtacaagcagaaggactccc 1602
            |||||||  |||||||||||||  |||| ||||||||||| ||||||||  ||||| | |
Sbjct: 5874 atgatcaggacaatgaaagatgtgtaatctgcctggaggaatacaagcatgaggacacac 5933

                            
Query: 1603 ttgggaagctgaaatg 1618
            |||||| |||||||||
Sbjct: 5934 ttgggaggctgaaatg 5949



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                              
Query: 1641 tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
            |||||||||||||||||| |||||||| || ||||||| ||||| |||||
Sbjct: 5972 tgcatcaagaagtggctgcaggtgaaggacacctgcccagtttgcaaagc 6021



to top

>dbj|AK073342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030D14, full
            insert sequence
          Length = 2057

 Score =  365 bits (184), Expect = 4e-97
 Identities = 277/308 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1212 ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
            |||||||| || |||||||||    |||||||||||||||||||||||||||||||||||
Sbjct: 1334 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 1393

                                                                        
Query: 1272 tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
            |||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 1394 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 1453

                                                                        
Query: 1332 cgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctcac 1391
            || |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||||
Sbjct: 1454 cggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctcac 1513

                                                                        
Query: 1392 tgggacatgagactggacattgatgacatgagctatgaggagctcctggcgttggaagaa 1451
            |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1514 tgggacatgagactggacattgatgacatgagctatgaggagctgctggctttggaagaa 1573

                                                                        
Query: 1452 cgaataggcagtgtaaacactggcctggctgatgaaaaaatctcaggatgtgtgatggag 1511
            || ||||||  ||| ||||||||||| |||||||| ||||| || || ||||||||||||
Sbjct: 1574 cgcataggccatgtgaacactggcctcgctgatgagaaaatttctggctgtgtgatggag 1633

                    
Query: 1512 ctagcctg 1519
             |||||||
Sbjct: 1634 gtagcctg 1641



 Score =  321 bits (162), Expect = 5e-84
 Identities = 311/360 (86%), Gaps = 3/360 (0%)
 Strand = Plus / Plus

                                                                        
Query: 754  tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
            ||||||||| ||||||||| ||||| |  | |||||||| |||||||||||||||||| |
Sbjct: 765  tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 824

                                                                        
Query: 814  tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
            |||||||  | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 825  tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 884

                                                                        
Query: 874  catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
            | |||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 885  cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 944

                                                                        
Query: 934  caccagtacaacgggaaagagctcctttatctctacctcccagaattgtccccccaggga 993
            ||||||||||||| || ||||||||||||||| | | ||| |||||| | || |||||| 
Sbjct: 945  caccagtacaacgtgacagagctcctttatctgtgcatccaagaattcttcctccagggc 1004

                                                                        
Query: 994  cagatggaagcaccggtatagcattcagagagaggccatactatcctgctccacagggca 1053
            | ||||| |||| |   ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1005 ctgatggtagcagc---atagcattcagagagaggccatactatcctgctccacagagca 1061

                                                                        
Query: 1054 ccaacataagtgcccctgtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
            ||||||||||||| ||||||||||||||||||  ||||| |||| |||||||||||||||
Sbjct: 1062 ccaacataagtgcacctgtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 1121



 Score =  214 bits (108), Expect = 9e-52
 Identities = 398/495 (80%), Gaps = 6/495 (1%)
 Strand = Plus / Plus

                                                                       
Query: 195 tgatcagactgtacatgagtcatggctgggcatcattatcacaattcccagatgtcaaga 254
           |||||||| ||| || | || |||||||| ||||| ||| | ||||||||||||||  | 
Sbjct: 215 tgatcagattgttcacgtgttatggctggacatcagtataataattcccagatgtcccgg 274

                                                                       
Query: 255 atggatcgtatgaaccagccacgtaatgaacctccgccttttggtcaaaagttatttatg 314
           ||||||| |||| ||  || |   ||||||||||| |||||||| |||||||||||||||
Sbjct: 275 atggatcatatggacaggctaaacaatgaacctccaccttttggccaaaagttatttatg 334

                                                                       
Query: 315 catcctagaggtgatgcacctaatggagcgggaccatcaggttttgggggtacaactgtg 374
           ||||||||  ||||| || |||| ||||| ||| | || || | || |||||  ||  ||
Sbjct: 335 catcctaggagtgatccagctaacggagctggatcgtctggctatgtgggtaacacaatg 394

                                                                       
Query: 375 agatctaatgaacttccatcctcaagctacactggtcagtcttatggtcagcagattgga 434
           ||||| ||||| ||||| || ||||| ||  |||| ||  ||||||||||||||| | ||
Sbjct: 395 agatcgaatgatcttccgtcttcaagttatgctggccaagcttatggtcagcagaataga 454

                                                                       
Query: 435 gcccctggaaccttgcatgcttccaatgctggttatcctcctgctggaagctctagtagc 494
           |||||      | | ||||||||  || ||||| || | |||||||||||||||||| | 
Sbjct: 455 gcccc------catccatgcttcatattctggtcatgcacctgctggaagctctagtggt 508

                                                                       
Query: 495 aactatgcaccatacaatactcaacatgtgccttctttaagctatccacatagatccgag 554
           | ||||||||||||||||||||||||| ||||| ||| ||||||||||||  ||||||||
Sbjct: 509 agctatgcaccatacaatactcaacatatgcctgcttcaagctatccacacggatccgag 568

                                                                       
Query: 555 gatagttttattcctggagtccatgtggatgacagaagggttgcaccgaagcgcagaaat 614
           |||| ||| |||||  |   ||||||||||| |||||||||||||  |||| | ||||||
Sbjct: 569 gataatttcattccaagttcccatgtggatggcagaagggttgcattgaagagaagaaat 628

                                                                       
Query: 615 cccatcactcatcctgtggatggtgtcagtgctggaggctattatcctggcagttcttcc 674
           ||||||| |||||||   |||||  || ||| ||||   |||||| ||||||||||||||
Sbjct: 629 cccatcattcatcctacagatggattcggtgttggaaattattatgctggcagttcttcc 688

                          
Query: 675 aataatcagttctct 689
           |||| ||||||||||
Sbjct: 689 aatactcagttctct 703



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 1641 tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
            |||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 1763 tgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagc 1812



 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1543 atgatcaaaacaatgaaagatgcataatttgcctggaggagtacaagcagaaggactccc 1602
            |||||||  |||||||||||||  |||| ||||||||||| ||||||||  ||||| | |
Sbjct: 1665 atgatcaggacaatgaaagatgtgtaatctgcctggaggaatacaagcatgaggacacac 1724

                            
Query: 1603 ttgggaagctgaaatg 1618
            |||||| |||||||||
Sbjct: 1725 ttgggaggctgaaatg 1740



to top

>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score =  190 bits (96), Expect = 1e-44
 Identities = 183/212 (86%)
 Strand = Plus / Minus

                                                                         
Query: 754   tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
             ||||||||| ||||||||| ||||| |  | |||||||| |||||||||||||||||| |
Sbjct: 82180 tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 82121

                                                                         
Query: 814   tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
             |||||||  | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 82120 tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 82061

                                                                         
Query: 874   catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
             | |||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 82060 cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 82001

                                             
Query: 934   caccagtacaacgggaaagagctcctttatct 965
             ||||||||||||| || |||||||||||||||
Sbjct: 82000 caccagtacaacgtgacagagctcctttatct 81969



 Score =  180 bits (91), Expect = 1e-41
 Identities = 315/390 (80%), Gaps = 6/390 (1%)
 Strand = Plus / Minus

                                                                         
Query: 300   caaaagttatttatgcatcctagaggtgatgcacctaatggagcgggaccatcaggtttt 359
             |||||||||||||||||||||||  ||||| || |||| ||||| ||| | || || | |
Sbjct: 82625 caaaagttatttatgcatcctaggagtgatccagctaacggagctggatcgtctggctat 82566

                                                                         
Query: 360   gggggtacaactgtgagatctaatgaacttccatcctcaagctacactggtcagtcttat 419
             | |||||  ||  ||||||| ||||| ||||| || ||||| ||  |||| ||  |||||
Sbjct: 82565 gtgggtaacacaatgagatcgaatgatcttccgtcttcaagttatgctggccaagcttat 82506

                                                                         
Query: 420   ggtcagcagattggagcccctggaaccttgcatgcttccaatgctggttatcctcctgct 479
             |||||||||| | |||||||      | | ||||||||  || ||||| || | ||||||
Sbjct: 82505 ggtcagcagaatagagcccc------catccatgcttcatattctggtcatgcacctgct 82452

                                                                         
Query: 480   ggaagctctagtagcaactatgcaccatacaatactcaacatgtgccttctttaagctat 539
             |||||||||||| | | ||||||||||||||||||||||||| ||||| ||| |||||||
Sbjct: 82451 ggaagctctagtggtagctatgcaccatacaatactcaacatatgcctgcttcaagctat 82392

                                                                         
Query: 540   ccacatagatccgaggatagttttattcctggagtccatgtggatgacagaagggttgca 599
             |||||  |||||||||||| ||| |||||  |   ||||||||||| |||||||||||||
Sbjct: 82391 ccacacggatccgaggataatttcattccaagttcccatgtggatggcagaagggttgca 82332

                                                                         
Query: 600   ccgaagcgcagaaatcccatcactcatcctgtggatggtgtcagtgctggaggctattat 659
               |||| | ||||||||||||| |||||||   |||||  || ||| ||||   ||||||
Sbjct: 82331 ttgaagagaagaaatcccatcattcatcctacagatggattcggtgttggaaattattat 82272

                                           
Query: 660   cctggcagttcttccaataatcagttctct 689
              |||||||||||||||||| ||||||||||
Sbjct: 82271 gctggcagttcttccaatactcagttctct 82242



 Score =  157 bits (79), Expect = 2e-34
 Identities = 97/103 (94%)
 Strand = Plus / Minus

                                                                         
Query: 1011  atagcattcagagagaggccatactatcctgctccacagggcaccaacataagtgcccct 1070
             ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 81583 atagcattcagagagaggccatactatcctgctccacagagcaccaacataagtgcacct 81524

                                                        
Query: 1071  gtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
             |||||||||||||||  ||||| |||| |||||||||||||||
Sbjct: 81523 gtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 81481



 Score =  147 bits (74), Expect = 2e-31
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                         
Query: 1330  agcgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctc 1389
             |||| |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 81069 agcggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctc 81010

                                                       
Query: 1390  actgggacatgagactggacattgatgacatgagctatgagg 1431
             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81009 actgggacatgagactggacattgatgacatgagctatgagg 80968



 Score =  143 bits (72), Expect = 3e-30
 Identities = 108/120 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1212  ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
             |||||||| || |||||||||    |||||||||||||||||||||||||||||||||||
Sbjct: 81268 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 81209

                                                                         
Query: 1272  tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
             |||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 81208 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 81149



 Score = 85.7 bits (43), Expect = 5e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1429  aggagctcctggcgttggaagaacgaataggcagtgtaaacactggcctggctgatgaaa 1488
             ||||||| ||||| ||||||||||| ||||||  ||| ||||||||||| |||||||| |
Sbjct: 80889 aggagctgctggctttggaagaacgcataggccatgtgaacactggcctcgctgatgaga 80830

                                            
Query: 1489  aaatctcaggatgtgtgatggagctagcctg 1519
             |||| || || |||||||||||| |||||||
Sbjct: 80829 aaatttctggctgtgtgatggaggtagcctg 80799



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 1641  tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
             |||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 80574 tgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagc 80525



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  190 bits (96), Expect = 1e-44
 Identities = 183/212 (86%)
 Strand = Plus / Minus

                                                                           
Query: 754     tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
               ||||||||| ||||||||| ||||| |  | |||||||| |||||||||||||||||| |
Sbjct: 3659833 tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 3659774

                                                                           
Query: 814     tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
               |||||||  | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 3659773 tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 3659714

                                                                           
Query: 874     catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
               | |||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3659713 cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 3659654

                                               
Query: 934     caccagtacaacgggaaagagctcctttatct 965
               ||||||||||||| || |||||||||||||||
Sbjct: 3659653 caccagtacaacgtgacagagctcctttatct 3659622



 Score =  180 bits (91), Expect = 1e-41
 Identities = 315/390 (80%), Gaps = 6/390 (1%)
 Strand = Plus / Minus

                                                                           
Query: 300     caaaagttatttatgcatcctagaggtgatgcacctaatggagcgggaccatcaggtttt 359
               |||||||||||||||||||||||  ||||| || |||| ||||| ||| | || || | |
Sbjct: 3660278 caaaagttatttatgcatcctaggagtgatccagctaacggagctggatcgtctggctat 3660219

                                                                           
Query: 360     gggggtacaactgtgagatctaatgaacttccatcctcaagctacactggtcagtcttat 419
               | |||||  ||  ||||||| ||||| ||||| || ||||| ||  |||| ||  |||||
Sbjct: 3660218 gtgggtaacacaatgagatcgaatgatcttccgtcttcaagttatgctggccaagcttat 3660159

                                                                           
Query: 420     ggtcagcagattggagcccctggaaccttgcatgcttccaatgctggttatcctcctgct 479
               |||||||||| | |||||||      | | ||||||||  || ||||| || | ||||||
Sbjct: 3660158 ggtcagcagaatagagcccc------catccatgcttcatattctggtcatgcacctgct 3660105

                                                                           
Query: 480     ggaagctctagtagcaactatgcaccatacaatactcaacatgtgccttctttaagctat 539
               |||||||||||| | | ||||||||||||||||||||||||| ||||| ||| |||||||
Sbjct: 3660104 ggaagctctagtggtagctatgcaccatacaatactcaacatatgcctgcttcaagctat 3660045

                                                                           
Query: 540     ccacatagatccgaggatagttttattcctggagtccatgtggatgacagaagggttgca 599
               |||||  |||||||||||| ||| |||||  |   ||||||||||| |||||||||||||
Sbjct: 3660044 ccacacggatccgaggataatttcattccaagttcccatgtggatggcagaagggttgca 3659985

                                                                           
Query: 600     ccgaagcgcagaaatcccatcactcatcctgtggatggtgtcagtgctggaggctattat 659
                 |||| | ||||||||||||| |||||||   |||||  || ||| ||||   ||||||
Sbjct: 3659984 ttgaagagaagaaatcccatcattcatcctacagatggattcggtgttggaaattattat 3659925

                                             
Query: 660     cctggcagttcttccaataatcagttctct 689
                |||||||||||||||||| ||||||||||
Sbjct: 3659924 gctggcagttcttccaatactcagttctct 3659895



 Score =  157 bits (79), Expect = 2e-34
 Identities = 97/103 (94%)
 Strand = Plus / Minus

                                                                           
Query: 1011    atagcattcagagagaggccatactatcctgctccacagggcaccaacataagtgcccct 1070
               ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 3659236 atagcattcagagagaggccatactatcctgctccacagagcaccaacataagtgcacct 3659177

                                                          
Query: 1071    gtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
               |||||||||||||||  ||||| |||| |||||||||||||||
Sbjct: 3659176 gtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 3659134



 Score =  147 bits (74), Expect = 2e-31
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                           
Query: 1330    agcgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctc 1389
               |||| |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 3658722 agcggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctc 3658663

                                                         
Query: 1390    actgggacatgagactggacattgatgacatgagctatgagg 1431
               ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3658662 actgggacatgagactggacattgatgacatgagctatgagg 3658621



 Score =  143 bits (72), Expect = 3e-30
 Identities = 108/120 (90%)
 Strand = Plus / Minus

                                                                           
Query: 1212    ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
               |||||||| || |||||||||    |||||||||||||||||||||||||||||||||||
Sbjct: 3658921 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 3658862

                                                                           
Query: 1272    tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
               |||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 3658861 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 3658802



 Score = 85.7 bits (43), Expect = 5e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                           
Query: 1429    aggagctcctggcgttggaagaacgaataggcagtgtaaacactggcctggctgatgaaa 1488
               ||||||| ||||| ||||||||||| ||||||  ||| ||||||||||| |||||||| |
Sbjct: 3658542 aggagctgctggctttggaagaacgcataggccatgtgaacactggcctcgctgatgaga 3658483

                                              
Query: 1489    aaatctcaggatgtgtgatggagctagcctg 1519
               |||| || || |||||||||||| |||||||
Sbjct: 3658482 aaatttctggctgtgtgatggaggtagcctg 3658452



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                 
Query: 1641    tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
               |||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 3658227 tgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagc 3658178



to top

>gb|BT019187.1| Zea mays clone Contig858.F mRNA sequence
          Length = 1516

 Score =  180 bits (91), Expect = 1e-41
 Identities = 229/275 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1237 gtggtagtgcaaggagtagaaggatgagggattcctatcattgttttcatcctttgatga 1296
            ||||||||||||||||||||||| |||||||||| || |||  ||||| |||  || | |
Sbjct: 756  gtggtagtgcaaggagtagaaggctgagggattcataccatgcttttcgtccactggtta 815

                                                                        
Query: 1297 ttgaggacaataaccttggaagatcggcagctgagcgttttatgatgctggaccagttag 1356
            |||| || |||||| |  || || | ||| | |||||||||||||||||  | |||||| 
Sbjct: 816  ttgaagaaaataacttgagaggaccagcaaccgagcgttttatgatgctaaatcagttat 875

                                                                        
Query: 1357 tcatccacgaatctagagaagcattagaccctcactgggacatgagactggacattgatg 1416
            | ||||| ||||| |||||||  |  |||||||||||||||||||| |||||||||||||
Sbjct: 876  ttatccatgaatcgagagaagattctgaccctcactgggacatgaggctggacattgatg 935

                                                                        
Query: 1417 acatgagctatgaggagctcctggcgttggaagaacgaataggcagtgtaaacactggcc 1476
            | ||||| ||||||||||| ||||| |||| |||||||||||||| ||| ||||| ||||
Sbjct: 936  atatgagttatgaggagctgctggctttgggagaacgaataggcaatgtcaacacgggcc 995

                                               
Query: 1477 tggctgatgaaaaaatctcaggatgtgtgatggag 1511
            | |||||||||||| | ||| | ||||||| ||||
Sbjct: 996  tagctgatgaaaaactttcaagctgtgtgacggag 1030



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 1640 ctgcatcaagaagtggctggaggtgaagaacgcctgccc 1678
            |||||||||||| |||||| ||||||||||||| |||||
Sbjct: 1159 ctgcatcaagaaatggctgcaggtgaagaacgcttgccc 1197



to top

>gb|AY110685.1| Zea mays CL9024_1 mRNA sequence
          Length = 548

 Score =  145 bits (73), Expect = 7e-31
 Identities = 139/161 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1329 gagcgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccct 1388
            ||||| |||||||||||  | |||||| | ||||| ||||| |||||||  |  ||||||
Sbjct: 526  gagcggtttatgatgctaaatcagttatttatccatgaatcgagagaagattctgaccct 467

                                                                        
Query: 1389 cactgggacatgagactggacattgatgacatgagctatgaggagctcctggcgttggaa 1448
            |||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| |||| |
Sbjct: 466  cactgggacatgaggctggacattgatgatatgagttatgaggagctgctggctttggga 407

                                                     
Query: 1449 gaacgaataggcagtgtaaacactggcctggctgatgaaaa 1489
            ||||||||||||| ||| ||||| ||||| |||||||||||
Sbjct: 406  gaacgaataggcaatgtcaacacgggcctagctgatgaaaa 366



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 1640 ctgcatcaagaagtggctggaggtgaagaacgcctgccc 1678
            |||||||||||| |||||| ||||||||||||| |||||
Sbjct: 215  ctgcatcaagaaatggctgcaggtgaagaacgcttgccc 177



to top

>gb|BT013437.1| Lycopersicon esculentum clone 132078F, mRNA sequence
          Length = 2018

 Score = 65.9 bits (33), Expect = 5e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                             
Query: 1393 gggacatgagactggacattgatgacatgagctatgaggagctcctggc 1441
            ||||||||||||| |||||||| |||||| ||||||||||||| |||||
Sbjct: 1532 gggacatgagacttgacattgacgacatgggctatgaggagcttctggc 1580



to top

>ref|NM_001048618.1| Oryza sativa (japonica cultivar-group) Os01g0159300 (Os01g0159300)
            mRNA, complete cds
          Length = 2000

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1364 cgaatctagagaagcattagaccctcactgggacatgagactggacattgatgacatgag 1423
            |||||| |||||||||  |||||| ||| ||| ||||||||||||||||||  | |||||
Sbjct: 1446 cgaatcaagagaagcacaagacccccacagggccatgagactggacattgacaatatgag 1505

                                        
Query: 1424 ctatgaggagctcctggcgttggaagaa 1451
             |||||||| || ||||| |||| ||||
Sbjct: 1506 ttatgaggacctgctggctttgggagaa 1533



to top

>dbj|AK073728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058G15, full
            insert sequence
          Length = 2002

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1364 cgaatctagagaagcattagaccctcactgggacatgagactggacattgatgacatgag 1423
            |||||| |||||||||  |||||| ||| ||| ||||||||||||||||||  | |||||
Sbjct: 1448 cgaatcaagagaagcacaagacccccacagggccatgagactggacattgacaatatgag 1507

                                        
Query: 1424 ctatgaggagctcctggcgttggaagaa 1451
             |||||||| || ||||| |||| ||||
Sbjct: 1508 ttatgaggacctgctggctttgggagaa 1535



to top

>gb|AY106536.1| Zea mays PCO128034 mRNA sequence
          Length = 814

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                
Query: 1620 gggcatgacttccacgcgggctgcatcaagaagtggctggaggtgaagaacg 1671
            ||||| ||||||||||| |||||||||||| | ||||||| |||||||||||
Sbjct: 384  gggcacgacttccacgctggctgcatcaagcaatggctggtggtgaagaacg 435



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                           
Query: 1364    cgaatctagagaagcattagaccctcactgggacatgagactggacattgatgacatgag 1423
               |||||| |||||||||  |||||| ||| ||| ||||||||||||||||||  | |||||
Sbjct: 3100057 cgaatcaagagaagcacaagacccccacagggccatgagactggacattgacaatatgag 3099998

                       
Query: 1424    ctatgagg 1431
                |||||||
Sbjct: 3099997 ttatgagg 3099990



 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 98       gcgcggcggagagggaggagag 119
                ||||||||||||||||||||||
Sbjct: 35475002 gcgcggcggagagggaggagag 35475023



to top

>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0041E11
          Length = 146335

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1364  cgaatctagagaagcattagaccctcactgggacatgagactggacattgatgacatgag 1423
             |||||| |||||||||  |||||| ||| ||| ||||||||||||||||||  | |||||
Sbjct: 43845 cgaatcaagagaagcacaagacccccacagggccatgagactggacattgacaatatgag 43786

                     
Query: 1424  ctatgagg 1431
              |||||||
Sbjct: 43785 ttatgagg 43778



to top

>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1364  cgaatctagagaagcattagaccctcactgggacatgagactggacattgatgacatgag 1423
             |||||| |||||||||  |||||| ||| ||| ||||||||||||||||||  | |||||
Sbjct: 68097 cgaatcaagagaagcacaagacccccacagggccatgagactggacattgacaatatgag 68038

                     
Query: 1424  ctatgagg 1431
              |||||||
Sbjct: 68037 ttatgagg 68030



to top

>emb|CT981110.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
            cDNA library of differentiating xylem from Eucalyptus
            gunnii
          Length = 896

 Score = 52.0 bits (26), Expect = 0.008
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 1393 gggacatgagactggacattgatgacatgagctatgaggagctcctggcgttgg 1446
            ||||| |||| || ||||| ||| ||||||||||||||||||| ||||| ||||
Sbjct: 522  gggacttgaggctagacatagataacatgagctatgaggagctgctggcattgg 575



to top

>ref|NM_201889.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding (AT2G37150) mRNA, complete cds
          Length = 2471

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 1395 gacatgagactggacattgatgacatgagctatgaggagctcct 1438
            |||||||| || ||||| ||| |||||||||||||||| |||||
Sbjct: 1981 gacatgaggcttgacatcgataacatgagctatgaggaactcct 2024



to top

>ref|NM_179947.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding (AT2G37150) mRNA, complete cds
          Length = 1958

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 1395 gacatgagactggacattgatgacatgagctatgaggagctcct 1438
            |||||||| || ||||| ||| |||||||||||||||| |||||
Sbjct: 1468 gacatgaggcttgacatcgataacatgagctatgaggaactcct 1511



to top

>gb|AY096670.1| Arabidopsis thaliana putative protein with C-terminal RING finger
            (At2g37150) mRNA, complete cds
          Length = 1672

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 1395 gacatgagactggacattgatgacatgagctatgaggagctcct 1438
            |||||||| || ||||| ||| |||||||||||||||| |||||
Sbjct: 1315 gacatgaggcttgacatcgataacatgagctatgaggaactcct 1358



to top

>gb|AY070452.1| Arabidopsis thaliana putative protein with C-terminal RING finger
            (At2g37150) mRNA, complete cds
          Length = 1982

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 1395 gacatgagactggacattgatgacatgagctatgaggagctcct 1438
            |||||||| || ||||| ||| |||||||||||||||| |||||
Sbjct: 1468 gacatgaggcttgacatcgataacatgagctatgaggaactcct 1511



to top

>gb|AF167428.1| Lycopersicon esculentum 1-aminocyclopropane-1-carboxylate synthase
             (ACS6) gene, complete cds
          Length = 13648

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 105   ggagagggaggagagaggcgagcg 128
             ||||||||||||||||||||||||
Sbjct: 13432 ggagagggaggagagaggcgagcg 13409



to top

>gb|AY007367.1| Lycopersicon esculentum tospovirus resistance protein C (Sw5-c),
             tospovirus resistance protein D (Sw5-d), and tospovirus
             resistance protein E (Sw5-e) genes, complete cds
          Length = 59465

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 105   ggagagggaggagagaggcgagcg 128
             ||||||||||||||||||||||||
Sbjct: 51966 ggagagggaggagagaggcgagcg 51943



to top

>emb|BX819119.1|CNS0A9U7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB48ZF07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1841

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 1395 gacatgagactggacattgatgacatgagctatgaggagctcct 1438
            |||||||| || ||||| ||| |||||||||||||||| |||||
Sbjct: 1451 gacatgaggcttgacatcgataacatgagctatgaggaactcct 1494



to top

>gb|AY518222.1| Solanum tuberosum cultivar Desiree 14-3-3 protein isoform 20R gene,
           complete cds
          Length = 3959

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 105 ggagagggaggagagaggcgagcg 128
           ||||||||||||||||||||||||
Sbjct: 754 ggagagggaggagagaggcgagcg 731



 Score = 48.1 bits (24), Expect = 0.12
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 105 ggagagggaggagagaggcgagcg 128
           ||||||||||||||||||||||||
Sbjct: 909 ggagagggaggagagaggcgagcg 886



 Score = 46.1 bits (23), Expect = 0.47
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 105 ggagagggaggagagaggcgagc 127
           |||||||||||||||||||||||
Sbjct: 781 ggagagggaggagagaggcgagc 759



to top

>ref|NM_001068850.1| Oryza sativa (japonica cultivar-group) Os08g0528800 (Os08g0528800)
           mRNA, complete cds
          Length = 2034

 Score = 46.1 bits (23), Expect = 0.47
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 97  cgcgcggcggagagggaggagag 119
           |||||||||||||||||||||||
Sbjct: 121 cgcgcggcggagagggaggagag 99



to top

>gb|AC166639.2| Solanum demissum chromosome 5 clone PGEC219, complete sequence
          Length = 124895

 Score = 46.1 bits (23), Expect = 0.47
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 106    gagagggaggagagaggcgagcg 128
              |||||||||||||||||||||||
Sbjct: 122439 gagagggaggagagaggcgagcg 122461



to top

>gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete sequence
          Length = 159515

 Score = 46.1 bits (23), Expect = 0.47
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 1405   tggacattgatgacatgagctatgagg 1431
              ||||||||||| |||||||||||||||
Sbjct: 155607 tggacattgataacatgagctatgagg 155581



to top

>gb|AY022745.1| Oryza sativa microsatellite MRG5070 containing (CCT)X8, closest to
           marker G56, genomic sequence
          Length = 224

 Score = 46.1 bits (23), Expect = 0.47
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 97  cgcgcggcggagagggaggagag 119
           |||||||||||||||||||||||
Sbjct: 160 cgcgcggcggagagggaggagag 138



to top

>gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic sequence, complete
              sequence
          Length = 124895

 Score = 46.1 bits (23), Expect = 0.47
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 106    gagagggaggagagaggcgagcg 128
              |||||||||||||||||||||||
Sbjct: 122439 gagagggaggagagaggcgagcg 122461



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.47
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 97       cgcgcggcggagagggaggagag 119
                |||||||||||||||||||||||
Sbjct: 26315163 cgcgcggcggagagggaggagag 26315185



to top

>gb|AC155887.2| Medicago truncatula chromosome 7 BAC clone mth2-26k20, complete
            sequence
          Length = 8120

 Score = 46.1 bits (23), Expect = 0.47
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 1405 tggacattgatgacatgagctatgagg 1431
            ||||||||||| |||||||||||||||
Sbjct: 7968 tggacattgataacatgagctatgagg 7994



to top

>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H02
          Length = 170648

 Score = 46.1 bits (23), Expect = 0.47
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 97    cgcgcggcggagagggaggagag 119
             |||||||||||||||||||||||
Sbjct: 44744 cgcgcggcggagagggaggagag 44766



to top

>dbj|AK122011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111I11, full
           insert sequence
          Length = 2036

 Score = 46.1 bits (23), Expect = 0.47
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 97  cgcgcggcggagagggaggagag 119
           |||||||||||||||||||||||
Sbjct: 122 cgcgcggcggagagggaggagag 100



to top

>gb|DQ245079.1| Zea mays clone 12755 mRNA sequence
          Length = 793

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 460 atgctggttatcctcctgctgg 481
           ||||||||||||||||||||||
Sbjct: 340 atgctggttatcctcctgctgg 361



to top

>emb|CU019621.10| S.lycopersicum DNA sequence from clone LE_HBa-80D3 on chromosome 4,
             complete sequence
          Length = 88559

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 105   ggagagggaggagagaggcgag 126
             ||||||||||||||||||||||
Sbjct: 72348 ggagagggaggagagaggcgag 72327



to top

>ref|NM_001051222.1| Oryza sativa (japonica cultivar-group) Os01g0829100 (Os01g0829100)
           mRNA, complete cds
          Length = 1533

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 98  gcgcggcggagagggaggagag 119
           ||||||||||||||||||||||
Sbjct: 443 gcgcggcggagagggaggagag 422



to top

>gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09, complete sequence
          Length = 133983

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 107   agagggaggagagaggcgagcg 128
             ||||||||||||||||||||||
Sbjct: 11339 agagggaggagagaggcgagcg 11318



to top

>gb|AC149265.1| Solanum demissum chromosome 5 clone PGEC858M02, complete sequence
          Length = 114450

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 107  agagggaggagagaggcgagcg 128
            ||||||||||||||||||||||
Sbjct: 5452 agagggaggagagaggcgagcg 5473



 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 105   ggagagggaggagagaggcgag 126
             ||||||||||||||||||||||
Sbjct: 87755 ggagagggaggagagaggcgag 87776



to top

>ref|XM_876350.1| PREDICTED: Bos taurus similar to Kruppel-like factor 4 (Epithelial
           zinc-finger protein EZF) (Gut-enriched Krueppel-like
           factor), transcript variant 5 (LOC520842), mRNA
          Length = 2640

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 144 ctgccgcaagccgcgccgactc 165
           ||||||||||||||||||||||
Sbjct: 563 ctgccgcaagccgcgccgactc 542



to top

>ref|XM_876283.1| PREDICTED: Bos taurus similar to Kruppel-like factor 4 (Epithelial
           zinc-finger protein EZF) (Gut-enriched Krueppel-like
           factor), transcript variant 4 (LOC520842), mRNA
          Length = 2541

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 144 ctgccgcaagccgcgccgactc 165
           ||||||||||||||||||||||
Sbjct: 365 ctgccgcaagccgcgccgactc 344



to top

>ref|XM_599092.2| PREDICTED: Bos taurus similar to Kruppel-like factor 4 (Epithelial
           zinc-finger protein EZF) (Gut-enriched Krueppel-like
           factor), transcript variant 1 (LOC520842), mRNA
          Length = 2574

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 144 ctgccgcaagccgcgccgactc 165
           ||||||||||||||||||||||
Sbjct: 365 ctgccgcaagccgcgccgactc 344



to top

>ref|XM_876162.1| PREDICTED: Bos taurus similar to Kruppel-like factor 4 (Epithelial
           zinc-finger protein EZF) (Gut-enriched Krueppel-like
           factor), transcript variant 3 (LOC520842), mRNA
          Length = 2475

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 144 ctgccgcaagccgcgccgactc 165
           ||||||||||||||||||||||
Sbjct: 365 ctgccgcaagccgcgccgactc 344



to top

>ref|XM_876099.1| PREDICTED: Bos taurus similar to Kruppel-like factor 4 (Epithelial
           zinc-finger protein EZF) (Gut-enriched Krueppel-like
           factor), transcript variant 2 (LOC520842), mRNA
          Length = 2415

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 144 ctgccgcaagccgcgccgactc 165
           ||||||||||||||||||||||
Sbjct: 365 ctgccgcaagccgcgccgactc 344



to top

>gb|AY303170.1| Solanum bulbocastanum chromosome 8 clone UW3A14, complete sequence
          Length = 79178

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 105   ggagagggaggagagaggcgag 126
             ||||||||||||||||||||||
Sbjct: 27488 ggagagggaggagagaggcgag 27467



to top

>ref|NM_001031782.1| Sus scrofa kruppel-like factor 4 (KLF4), mRNA
 gb|DQ000310.1| Sus scrofa kruppel-like factor 4 (KLF4) mRNA, complete cds
          Length = 1533

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 144 ctgccgcaagccgcgccgactc 165
           ||||||||||||||||||||||
Sbjct: 230 ctgccgcaagccgcgccgactc 209



to top

>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0446G04
          Length = 143515

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 98   gcgcggcggagagggaggagag 119
            ||||||||||||||||||||||
Sbjct: 5189 gcgcggcggagagggaggagag 5210



to top

>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088C09
          Length = 154084

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 98    gcgcggcggagagggaggagag 119
             ||||||||||||||||||||||
Sbjct: 98951 gcgcggcggagagggaggagag 98972



to top

>dbj|AK060644.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G02, full
           insert sequence
          Length = 1533

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 98  gcgcggcggagagggaggagag 119
           ||||||||||||||||||||||
Sbjct: 443 gcgcggcggagagggaggagag 422



to top

>emb|Z36750.1|LJRINGP L.japonicus (Gifu B-129) mRNA for RING finger protein (C terminal)
          Length = 2103

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 1395 gacatgagactggacattgatgacatgagctatgagga 1432
            ||||||||  ||||||| ||| ||||||||||||||||
Sbjct: 1625 gacatgaggatggacatagataacatgagctatgagga 1662



to top

>ref|XM_764252.1| Giardia lamblia ATCC 50803 beta-actin binding protein
            (GLP_239_7782_1021) partial mRNA
          Length = 6762

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 339  ggagcgggaccatcaggttttg 360
            ||||||||||||||||||||||
Sbjct: 2144 ggagcgggaccatcaggttttg 2123



to top

>dbj|AB018422.1| Pisum sativum mRNA for DNA binding zinc finger protein (Pspzf),
            partial cds
          Length = 1626

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 1395 gacatgagactggacattgatgacatgagctatgagga 1432
            ||||||||| ||||| | ||| ||||||||||||||||
Sbjct: 1096 gacatgagaatggacgtagataacatgagctatgagga 1133



to top

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 1540    agaatgatcaaaacaatgaaag 1561
               ||||||||||||||||||||||
Sbjct: 5411722 agaatgatcaaaacaatgaaag 5411743



to top

>gb|AC171726.2| Solanum lycopersicum chromosome 1 clone C01HBa0088L02, complete
             sequence
          Length = 111737

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 104   cggagagggaggagagaggcgagcg 128
             ||||||| |||||||||||||||||
Sbjct: 22994 cggagagagaggagagaggcgagcg 23018



to top

>emb|CT832310.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA208M09, full
            insert sequence
          Length = 2640

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 1425 tatgaggagctcctggcgttggaagaacgaataggcagtgtaaacactggcct 1477
            |||||||||||  ||||  |||||||| ||||||||| ||| | |||||||||
Sbjct: 2105 tatgaggagctattggcactggaagaaagaataggcaatgttagcactggcct 2157



to top

>emb|CT832309.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA202K22, full
            insert sequence
          Length = 2700

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 1425 tatgaggagctcctggcgttggaagaacgaataggcagtgtaaacactggcct 1477
            |||||||||||  ||||  |||||||| ||||||||| ||| | |||||||||
Sbjct: 2177 tatgaggagctattggcactggaagaaagaataggcaatgttagcactggcct 2229



to top

>ref|NM_001060613.1| Oryza sativa (japonica cultivar-group) Os04g0648800 (Os04g0648800)
            mRNA, complete cds
          Length = 2637

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 1425 tatgaggagctcctggcgttggaagaacgaataggcagtgtaaacactggcct 1477
            |||||||||||  ||||  |||||||| ||||||||| ||| | |||||||||
Sbjct: 2104 tatgaggagctattggcactggaagaaagaataggcaatgttagcactggcct 2156



to top

>emb|CU013516.2| Medicago truncatula chromosome 5 clone mte1-13o15, COMPLETE SEQUENCE
          Length = 89331

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   gagagggaggagagaggcgag 126
             |||||||||||||||||||||
Sbjct: 25792 gagagggaggagagaggcgag 25772



 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   gagagggaggagagaggcgag 126
             |||||||||||||||||||||
Sbjct: 52676 gagagggaggagagaggcgag 52656



to top

>ref|NM_030665.3| Homo sapiens retinoic acid induced 1 (RAI1), mRNA
          Length = 7668

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 983  ccccccagggacagatggaag 1003
            |||||||||||||||||||||
Sbjct: 3567 ccccccagggacagatggaag 3587



to top

>gb|AC005370.1| Homo sapiens chromosome 5, BAC clone 193n11 (LBNL H182), complete
             sequence
          Length = 76416

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1244  tgcaaggagtagaaggatgag 1264
             |||||||||||||||||||||
Sbjct: 75954 tgcaaggagtagaaggatgag 75974



to top

>gb|AC126675.4| Mus musculus BAC clone RP23-430P11 from chromosome 19, complete
             sequence
          Length = 183462

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 109   agggaggagagaggcgagcggagga 133
             |||||||||||||| ||||||||||
Sbjct: 42479 agggaggagagaggagagcggagga 42455



to top

>gb|AY172136.1| Homo sapiens retinoic acid induced 1 (RAI1) mRNA, complete cds
          Length = 7663

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 983  ccccccagggacagatggaag 1003
            |||||||||||||||||||||
Sbjct: 3568 ccccccagggacagatggaag 3588



to top

>gb|AF411809.1| Lycopersicon esculentum BAC clone FW2.2, complete sequence
          Length = 127892

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   gagggaggagagaggcgagcg 128
             |||||||||||||||||||||
Sbjct: 97585 gagggaggagagaggcgagcg 97565



to top

>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence
          Length = 70347

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   agggaggagagaggcgagcgg 129
             |||||||||||||||||||||
Sbjct: 68275 agggaggagagaggcgagcgg 68255



to top

>emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chromosome 17, complete
              sequence
          Length = 205369

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 956    tcctttatctctacctcccagaatt 980
              ||||| |||||||||||||||||||
Sbjct: 121467 tccttcatctctacctcccagaatt 121491



to top

>gb|AC016825.12| Homo sapiens chromosome 10 clone RP11-498B4, complete sequence
          Length = 198261

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1598   ctcccttgggaagctgaaatg 1618
              |||||||||||||||||||||
Sbjct: 166982 ctcccttgggaagctgaaatg 166962



to top

>gb|AC006260.4| Arabidopsis thaliana chromosome 2 clone T2N18 map ve018, complete
             sequence
          Length = 80736

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 1395  gacatgagactggacattgatgacatgagctatgagg 1431
             |||||||| || ||||| ||| |||||||||||||||
Sbjct: 34684 gacatgaggcttgacatcgataacatgagctatgagg 34720



to top

>gb|AC104440.1| Homo sapiens chromosome 3 clone RP11-814M22, complete sequence
          Length = 168367

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     accaccaccacctcattcaat 24
             |||||||||||||||||||||
Sbjct: 57283 accaccaccacctcattcaat 57263



to top

>emb|AL450445.6| Human DNA sequence from clone RP11-411G9 on chromosome 13, complete
            sequence
          Length = 141867

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1819 taaagttaggattgttttgtg 1839
            |||||||||||||||||||||
Sbjct: 9290 taaagttaggattgttttgtg 9310



to top

>emb|AL157382.14| Human DNA sequence from clone RP13-62H24 on chromosome Xq21.1-21.33
             Contains a ribosomal protein L7 (RPL7) pseudogene,
             complete sequence
          Length = 92160

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1474  gcctggctgatgaaaaaatct 1494
             |||||||||||||||||||||
Sbjct: 85737 gcctggctgatgaaaaaatct 85717



to top

>emb|AL121903.13|HSDJ155G6 Human DNA sequence from clone RP1-155G6 on chromosome 20 Contains the
             3' end of the ARFGEF2 gene for ADP-ribosylation factor
             guanine nucleotide-exchange factor 2 (brefeldin
             A-inhibited), the 5' end of the CSE1L gene for chromosome
             segregation 1-like (yeast), the SNAP23P gene for
             synaptosomal-associated protein (23 kDa) pseudogene, a
             novel gene and a CpG island, complete sequence
          Length = 80600

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1748  ctagttcaggaatttcagtta 1768
             |||||||||||||||||||||
Sbjct: 72775 ctagttcaggaatttcagtta 72795



to top

>emb|AJ303345.1|LES303345 Lycopersicon esculentum lateral suppressor gene, ORF1 and ORF2
          Length = 57047

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   gagggaggagagaggcgagcg 128
             |||||||||||||||||||||
Sbjct: 16706 gagggaggagagaggcgagcg 16686



to top

>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete
             sequence
          Length = 70497

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   agggaggagagaggcgagcgg 129
             |||||||||||||||||||||
Sbjct: 68425 agggaggagagaggcgagcgg 68405



to top

>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 187215

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 734   tccacaaataagttcaaacat 754
             |||||||||||||||||||||
Sbjct: 75030 tccacaaataagttcaaacat 75050



to top

>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence
          Length = 159868

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 983   ccccccagggacagatggaag 1003
             |||||||||||||||||||||
Sbjct: 53784 ccccccagggacagatggaag 53804



to top

>dbj|AK071468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098C19, full
            insert sequence
          Length = 2744

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 1425 tatgaggagctcctggcgttggaagaacgaataggcagtgtaaacactggcct 1477
            |||||||||||  ||||  |||||||| ||||||||| ||| | |||||||||
Sbjct: 2211 tatgaggagctattggcactggaagaaagaataggcaatgttagcactggcct 2263



to top

>dbj|AK067751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116L22, full
            insert sequence
          Length = 2637

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 1425 tatgaggagctcctggcgttggaagaacgaataggcagtgtaaacactggcct 1477
            |||||||||||  ||||  |||||||| ||||||||| ||| | |||||||||
Sbjct: 2104 tatgaggagctattggcactggaagaaagaataggcaatgttagcactggcct 2156



to top

>dbj|AP006140.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT37A01, TM0244,
             complete sequence
          Length = 102724

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 677   taatcagttctctggttatat 697
             |||||||||||||||||||||
Sbjct: 46428 taatcagttctctggttatat 46408



to top

>gb|AC010489.4|AC010489 Homo sapiens chromosome 5 clone CTD-2332G20, complete sequence
          Length = 146437

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1244  tgcaaggagtagaaggatgag 1264
             |||||||||||||||||||||
Sbjct: 91045 tgcaaggagtagaaggatgag 91025



to top

>emb|Y09539.1|LJRINGFIN L.japonicus gene encoding RING finger protein
          Length = 9454

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 1395 gacatgagactggacattgatgacatgagctatgagg 1431
            ||||||||  ||||||| ||| |||||||||||||||
Sbjct: 8019 gacatgaggatggacatagataacatgagctatgagg 8055



to top

>emb|AJ271791.1|HSA271791 Homo sapiens partial RAI1 gene for retinoid-acid induced protein 1,
             exons 1-7
          Length = 23843

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 983   ccccccagggacagatggaag 1003
             |||||||||||||||||||||
Sbjct: 12685 ccccccagggacagatggaag 12705



to top

>emb|AJ271790.1|HSA271790 Homo sapiens mRNA for retinoid-acid induced protein 1 (RAI1 gene)
          Length = 5667

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 983  ccccccagggacagatggaag 1003
            |||||||||||||||||||||
Sbjct: 2957 ccccccagggacagatggaag 2977



to top

>gb|AC005660.3|AC005660 citb_163_g_10, complete sequence
          Length = 112652

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1598  ctcccttgggaagctgaaatg 1618
             |||||||||||||||||||||
Sbjct: 46527 ctcccttgggaagctgaaatg 46547



to top

>emb|BX248383.5| Mouse DNA sequence from clone RP23-63C4 on chromosome 2, complete
            sequence
          Length = 15851

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 105  ggagagggaggagagaggcga 125
            |||||||||||||||||||||
Sbjct: 8078 ggagagggaggagagaggcga 8098



to top

>emb|CT009721.14| Mouse DNA sequence from clone RP23-130L13 on chromosome 9, complete
             sequence
          Length = 50450

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 430   ttggagcccctggaaccttgc 450
             |||||||||||||||||||||
Sbjct: 17219 ttggagcccctggaaccttgc 17199



to top

>gb|AF053645.1|HSCSE1G3 Homo sapiens cellular apoptosis susceptibility protein (CSE1) gene,
             exons 3 through 10
          Length = 12597

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1748  ctagttcaggaatttcagtta 1768
             |||||||||||||||||||||
Sbjct: 11593 ctagttcaggaatttcagtta 11613



to top

>gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, complete sequence
          Length = 168482

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    gcagtcagagggggaagggag 47
             |||||||||||||||||||||
Sbjct: 79745 gcagtcagagggggaagggag 79725



to top

>gb|AC006924.3|AC006924 Homo sapiens, clone hRPK.32_A_1, complete sequence
          Length = 165633

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1050  ggcaccaacataagtgcccct 1070
             |||||||||||||||||||||
Sbjct: 48918 ggcaccaacataagtgcccct 48938



to top

>emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and  PAC RP1-281I13 (complete covert by PAC
              RP1-253P07), complete sequence
          Length = 159876

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 983    ccccccagggacagatggaag 1003
              |||||||||||||||||||||
Sbjct: 106085 ccccccagggacagatggaag 106065



to top

>gb|AC150901.2| Mus musculus BAC clone RP23-62N8 from 19, complete sequence
          Length = 220883

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 109    agggaggagagaggcgagcggagga 133
              |||||||||||||| ||||||||||
Sbjct: 122188 agggaggagagaggagagcggagga 122212



to top

>emb|AL834468.1|HSM805571 Homo sapiens mRNA; cDNA DKFZp762L0710 (from clone DKFZp762L0710)
          Length = 5359

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 983  ccccccagggacagatggaag 1003
            |||||||||||||||||||||
Sbjct: 1236 ccccccagggacagatggaag 1256



to top

>dbj|AB058723.1| Homo sapiens mRNA for KIAA1820 protein, partial cds
          Length = 5915

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 983  ccccccagggacagatggaag 1003
            |||||||||||||||||||||
Sbjct: 3567 ccccccagggacagatggaag 3587


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 346,069,102
Number of extensions: 18770487
Number of successful extensions: 366448
Number of sequences better than 10.0: 90
Number of HSP's gapped: 366432
Number of HSP's successfully gapped: 134
Length of query: 1917
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1894
Effective length of database: 18,503,978,556
Effective search space: 35046535385064
Effective search space used: 35046535385064
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top