No.
Definition
Score (bits)
E Value
1 ref|NM_001061271.1| Oryza sativa (japonica cultivar-group) Os05g...
365
4e-97
2 dbj|AK120340.1| Oryza sativa (japonica cultivar-group) cDNA clon...
365
4e-97
3 dbj|AK073342.1| Oryza sativa (japonica cultivar-group) cDNA clon...
365
4e-97
4 gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome...
190
1e-44
5 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
190
1e-44
6 gb|BT019187.1| Zea mays clone Contig858.F mRNA sequence
180
1e-41
7 gb|AY110685.1| Zea mays CL9024_1 mRNA sequence
145
7e-31
8 gb|BT013437.1| Lycopersicon esculentum clone 132078F, mRNA sequence
66
5e-07
9 ref|NM_001048618.1| Oryza sativa (japonica cultivar-group) Os01g...
64
2e-06
10 dbj|AK073728.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
2e-06
11 gb|AY106536.1| Zea mays PCO128034 mRNA sequence
64
2e-06
12 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
56
5e-04
13 dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D...
56
5e-04
14 dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D...
56
5e-04
15 emb|CT981110.1| partial cDNA sequence from a Lambda ZAP II norma...
52
0.008
16 ref|NM_201889.1| Arabidopsis thaliana protein binding / ubiquiti...
48
0.12
17 ref|NM_179947.2| Arabidopsis thaliana protein binding / ubiquiti...
48
0.12
18 gb|AY096670.1| Arabidopsis thaliana putative protein with C-term...
48
0.12
19 gb|AY070452.1| Arabidopsis thaliana putative protein with C-term...
48
0.12
20 gb|AF167428.1| Lycopersicon esculentum 1-aminocyclopropane-1-car...
48
0.12
21 gb|AY007367.1| Lycopersicon esculentum tospovirus resistance pro...
48
0.12
22 emb|BX819119.1|CNS0A9U7 Arabidopsis thaliana Full-length cDNA Co...
48
0.12
23 gb|AY518222.1| Solanum tuberosum cultivar Desiree 14-3-3 protein...
48
0.12
24 ref|NM_001068850.1| Oryza sativa (japonica cultivar-group) Os08g...
46
0.47
25 gb|AC166639.2| Solanum demissum chromosome 5 clone PGEC219, comp...
46
0.47
26 gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete se...
46
0.47
27 gb|AY022745.1| Oryza sativa microsatellite MRG5070 containing (C...
46
0.47
28 gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic...
46
0.47
29 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.47
30 gb|AC155887.2| Medicago truncatula chromosome 7 BAC clone mth2-2...
46
0.47
31 dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.47
32 dbj|AK122011.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.47
33 gb|DQ245079.1| Zea mays clone 12755 mRNA sequence
44
1.9
34 emb|CU019621.10| S.lycopersicum DNA sequence from clone LE_HBa-8...
44
1.9
35 ref|NM_001051222.1| Oryza sativa (japonica cultivar-group) Os01g...
44
1.9
36 gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09, c...
44
1.9
37 gb|AC149265.1| Solanum demissum chromosome 5 clone PGEC858M02, c...
44
1.9
38 ref|XM_876350.1| PREDICTED: Bos taurus similar to Kruppel-like f...
44
1.9
39 ref|XM_876283.1| PREDICTED: Bos taurus similar to Kruppel-like f...
44
1.9
40 ref|XM_599092.2| PREDICTED: Bos taurus similar to Kruppel-like f...
44
1.9
41 ref|XM_876162.1| PREDICTED: Bos taurus similar to Kruppel-like f...
44
1.9
42 ref|XM_876099.1| PREDICTED: Bos taurus similar to Kruppel-like f...
44
1.9
43 gb|AY303170.1| Solanum bulbocastanum chromosome 8 clone UW3A14, ...
44
1.9
44 ref|NM_001031782.1| Sus scrofa kruppel-like factor 4 (KLF4), mRN...
44
1.9
45 dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic D...
44
1.9
46 dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D...
44
1.9
47 dbj|AK060644.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
1.9
48 emb|Z36750.1|LJRINGP L.japonicus (Gifu B-129) mRNA for RING fing...
44
1.9
49 ref|XM_764252.1| Giardia lamblia ATCC 50803 beta-actin binding p...
44
1.9
50 dbj|AB018422.1| Pisum sativum mRNA for DNA binding zinc finger p...
44
1.9
51 gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl...
44
1.9
52 gb|AC171726.2| Solanum lycopersicum chromosome 1 clone C01HBa008...
42
7.3
53 emb|CT832310.1| Oryza sativa (indica cultivar-group) cDNA clone:...
42
7.3
54 emb|CT832309.1| Oryza sativa (indica cultivar-group) cDNA clone:...
42
7.3
55 ref|NM_001060613.1| Oryza sativa (japonica cultivar-group) Os04g...
42
7.3
56 emb|CU013516.2| Medicago truncatula chromosome 5 clone mte1-13o1...
42
7.3
57 ref|NM_030665.3| Homo sapiens retinoic acid induced 1 (RAI1), mRNA
42
7.3
58 gb|AC005370.1| Homo sapiens chromosome 5, BAC clone 193n11 (LBNL...
42
7.3
59 gb|AC126675.4| Mus musculus BAC clone RP23-430P11 from chromosom...
42
7.3
60 gb|AY172136.1| Homo sapiens retinoic acid induced 1 (RAI1) mRNA,...
42
7.3
61 gb|AF411809.1| Lycopersicon esculentum BAC clone FW2.2, complete...
42
7.3
62 gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O1...
42
7.3
63 emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chr...
42
7.3
64 gb|AC016825.12| Homo sapiens chromosome 10 clone RP11-498B4, com...
42
7.3
65 gb|AC006260.4| Arabidopsis thaliana chromosome 2 clone T2N18 map...
42
7.3
66 gb|AC104440.1| Homo sapiens chromosome 3 clone RP11-814M22, comp...
42
7.3
67 emb|AL450445.6| Human DNA sequence from clone RP11-411G9 on chro...
42
7.3
68 emb|AL157382.14| Human DNA sequence from clone RP13-62H24 on chr...
42
7.3
69 emb|AL121903.13|HSDJ155G6 Human DNA sequence from clone RP1-155G...
42
7.3
70 emb|AJ303345.1|LES303345 Lycopersicon esculentum lateral suppres...
42
7.3
71 gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculen...
42
7.3
72 gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Canc...
42
7.3
73 gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, comp...
42
7.3
74 dbj|AK071468.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
7.3
75 dbj|AK067751.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
7.3
76 dbj|AP006140.1| Lotus japonicus genomic DNA, chromosome 4, clone...
42
7.3
77 gb|AC010489.4|AC010489 Homo sapiens chromosome 5 clone CTD-2332G...
42
7.3
78 emb|Y09539.1|LJRINGFIN L.japonicus gene encoding RING finger pro...
42
7.3
79 emb|AJ271791.1|HSA271791 Homo sapiens partial RAI1 gene for reti...
42
7.3
80 emb|AJ271790.1|HSA271790 Homo sapiens mRNA for retinoid-acid ind...
42
7.3
81 gb|AC005660.3|AC005660 citb_163_g_10, complete sequence
42
7.3
82 emb|BX248383.5| Mouse DNA sequence from clone RP23-63C4 on chrom...
42
7.3
83 emb|CT009721.14| Mouse DNA sequence from clone RP23-130L13 on ch...
42
7.3
84 gb|AF053645.1|HSCSE1G3 Homo sapiens cellular apoptosis susceptib...
42
7.3
85 gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, co...
42
7.3
86 gb|AC006924.3|AC006924 Homo sapiens, clone hRPK.32_A_1, complete...
42
7.3
87 emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-28...
42
7.3
88 gb|AC150901.2| Mus musculus BAC clone RP23-62N8 from 19, complet...
42
7.3
89 emb|AL834468.1|HSM805571 Homo sapiens mRNA; cDNA DKFZp762L0710 (...
42
7.3
90 dbj|AB058723.1| Homo sapiens mRNA for KIAA1820 protein, partial cds
42
7.3
>ref|NM_001061271.1 | Oryza sativa (japonica cultivar-group) Os05g0163400 (Os05g0163400)
mRNA, complete cds
Length = 2049
Score = 365 bits (184), Expect = 4e-97
Identities = 277/308 (89%)
Strand = Plus / Plus
Query: 1212 ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
|||||||| || ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1327 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 1386
Query: 1272 tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
|||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 1387 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 1446
Query: 1332 cgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctcac 1391
|| |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||||
Sbjct: 1447 cggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctcac 1506
Query: 1392 tgggacatgagactggacattgatgacatgagctatgaggagctcctggcgttggaagaa 1451
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1507 tgggacatgagactggacattgatgacatgagctatgaggagctgctggctttggaagaa 1566
Query: 1452 cgaataggcagtgtaaacactggcctggctgatgaaaaaatctcaggatgtgtgatggag 1511
|| |||||| ||| ||||||||||| |||||||| ||||| || || ||||||||||||
Sbjct: 1567 cgcataggccatgtgaacactggcctcgctgatgagaaaatttctggctgtgtgatggag 1626
Query: 1512 ctagcctg 1519
|||||||
Sbjct: 1627 gtagcctg 1634
Score = 313 bits (158), Expect = 1e-81
Identities = 310/360 (86%), Gaps = 3/360 (0%)
Strand = Plus / Plus
Query: 754 tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
||||||||| ||||||||| ||||| | | |||||||| |||||||||||||||||| |
Sbjct: 758 tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 817
Query: 814 tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
||||||| | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 818 tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 877
Query: 874 catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 878 cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 937
Query: 934 caccagtacaacgggaaagagctcctttatctctacctcccagaattgtccccccaggga 993
||||||||||||| || ||||||||||||||| | | ||| |||||| | || ||||||
Sbjct: 938 caccagtacaacgtgacagagctcctttatctgtgcatccaagaattcttcctccagggc 997
Query: 994 cagatggaagcaccggtatagcattcagagagaggccatactatcctgctccacagggca 1053
| ||||| || | | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 998 ctgatggtagta---gcatagcattcagagagaggccatactatcctgctccacagagca 1054
Query: 1054 ccaacataagtgcccctgtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 1055 ccaacataagtgcacctgtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 1114
Score = 214 bits (108), Expect = 9e-52
Identities = 398/495 (80%), Gaps = 6/495 (1%)
Strand = Plus / Plus
Query: 195 tgatcagactgtacatgagtcatggctgggcatcattatcacaattcccagatgtcaaga 254
|||||||| ||| || | || |||||||| ||||| ||| | |||||||||||||| |
Sbjct: 208 tgatcagattgttcacgtgttatggctggacatcagtataataattcccagatgtcccgg 267
Query: 255 atggatcgtatgaaccagccacgtaatgaacctccgccttttggtcaaaagttatttatg 314
||||||| |||| || || | ||||||||||| |||||||| |||||||||||||||
Sbjct: 268 atggatcatatggacaggctaaacaatgaacctccaccttttggccaaaagttatttatg 327
Query: 315 catcctagaggtgatgcacctaatggagcgggaccatcaggttttgggggtacaactgtg 374
|||||||| ||||| || |||| ||||| ||| | || || | || ||||| || ||
Sbjct: 328 catcctaggagtgatccagctaacggagctggatcgtctggctatgtgggtaacacaatg 387
Query: 375 agatctaatgaacttccatcctcaagctacactggtcagtcttatggtcagcagattgga 434
||||| ||||| ||||| || ||||| || |||| || ||||||||||||||| | ||
Sbjct: 388 agatcgaatgatcttccgtcttcaagttatgctggccaagcttatggtcagcagaataga 447
Query: 435 gcccctggaaccttgcatgcttccaatgctggttatcctcctgctggaagctctagtagc 494
||||| | | |||||||| || ||||| || | |||||||||||||||||| |
Sbjct: 448 gcccc------catccatgcttcatattctggtcatgcacctgctggaagctctagtggt 501
Query: 495 aactatgcaccatacaatactcaacatgtgccttctttaagctatccacatagatccgag 554
| ||||||||||||||||||||||||| ||||| ||| |||||||||||| ||||||||
Sbjct: 502 agctatgcaccatacaatactcaacatatgcctgcttcaagctatccacacggatccgag 561
Query: 555 gatagttttattcctggagtccatgtggatgacagaagggttgcaccgaagcgcagaaat 614
|||| ||| ||||| | ||||||||||| ||||||||||||| |||| | ||||||
Sbjct: 562 gataatttcattccaagttcccatgtggatggcagaagggttgcattgaagagaagaaat 621
Query: 615 cccatcactcatcctgtggatggtgtcagtgctggaggctattatcctggcagttcttcc 674
||||||| ||||||| ||||| || ||| |||| |||||| ||||||||||||||
Sbjct: 622 cccatcattcatcctacagatggattcggtgttggaaattattatgctggcagttcttcc 681
Query: 675 aataatcagttctct 689
|||| ||||||||||
Sbjct: 682 aatactcagttctct 696
Score = 67.9 bits (34), Expect = 1e-07
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1641 tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
|||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 1756 tgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagc 1805
Score = 63.9 bits (32), Expect = 2e-06
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 1543 atgatcaaaacaatgaaagatgcataatttgcctggaggagtacaagcagaaggactccc 1602
||||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| | |
Sbjct: 1658 atgatcaggacaatgaaagatgtgtaatctgcctggaggaatacaagcatgaggacacac 1717
Query: 1603 ttgggaagctgaaatg 1618
|||||| |||||||||
Sbjct: 1718 ttgggaggctgaaatg 1733
>dbj|AK120340.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013060N21, full
insert sequence
Length = 6226
Score = 365 bits (184), Expect = 4e-97
Identities = 277/308 (89%)
Strand = Plus / Plus
Query: 1212 ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
|||||||| || ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5543 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 5602
Query: 1272 tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
|||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 5603 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 5662
Query: 1332 cgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctcac 1391
|| |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||||
Sbjct: 5663 cggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctcac 5722
Query: 1392 tgggacatgagactggacattgatgacatgagctatgaggagctcctggcgttggaagaa 1451
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 5723 tgggacatgagactggacattgatgacatgagctatgaggagctgctggctttggaagaa 5782
Query: 1452 cgaataggcagtgtaaacactggcctggctgatgaaaaaatctcaggatgtgtgatggag 1511
|| |||||| ||| ||||||||||| |||||||| ||||| || || ||||||||||||
Sbjct: 5783 cgcataggccatgtgaacactggcctcgctgatgagaaaatttctggctgtgtgatggag 5842
Query: 1512 ctagcctg 1519
|||||||
Sbjct: 5843 gtagcctg 5850
Score = 313 bits (158), Expect = 1e-81
Identities = 310/360 (86%), Gaps = 3/360 (0%)
Strand = Plus / Plus
Query: 754 tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
||||||||| ||||||||| ||||| | | |||||||| |||||||||||||||||| |
Sbjct: 4974 tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 5033
Query: 814 tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
||||||| | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 5034 tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 5093
Query: 874 catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5094 cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 5153
Query: 934 caccagtacaacgggaaagagctcctttatctctacctcccagaattgtccccccaggga 993
||||||||||||| || ||||||||||||||| | | ||| |||||| | || ||||||
Sbjct: 5154 caccagtacaacgtgacagagctcctttatctgtgcatccaagaattcttcctccagggc 5213
Query: 994 cagatggaagcaccggtatagcattcagagagaggccatactatcctgctccacagggca 1053
| ||||| || | | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5214 ctgatggtagta---gcatagcattcagagagaggccatactatcctgctccacagagca 5270
Query: 1054 ccaacataagtgcccctgtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 5271 ccaacataagtgcacctgtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 5330
Score = 214 bits (108), Expect = 9e-52
Identities = 398/495 (80%), Gaps = 6/495 (1%)
Strand = Plus / Plus
Query: 195 tgatcagactgtacatgagtcatggctgggcatcattatcacaattcccagatgtcaaga 254
|||||||| ||| || | || |||||||| ||||| ||| | |||||||||||||| |
Sbjct: 4424 tgatcagattgttcacgtgttatggctggacatcagtataataattcccagatgtcccgg 4483
Query: 255 atggatcgtatgaaccagccacgtaatgaacctccgccttttggtcaaaagttatttatg 314
||||||| |||| || || | ||||||||||| |||||||| |||||||||||||||
Sbjct: 4484 atggatcatatggacaggctaaacaatgaacctccaccttttggccaaaagttatttatg 4543
Query: 315 catcctagaggtgatgcacctaatggagcgggaccatcaggttttgggggtacaactgtg 374
|||||||| ||||| || |||| ||||| ||| | || || | || ||||| || ||
Sbjct: 4544 catcctaggagtgatccagctaacggagctggatcgtctggctatgtgggtaacacaatg 4603
Query: 375 agatctaatgaacttccatcctcaagctacactggtcagtcttatggtcagcagattgga 434
||||| ||||| ||||| || ||||| || |||| || ||||||||||||||| | ||
Sbjct: 4604 agatcgaatgatcttccgtcttcaagttatgctggccaagcttatggtcagcagaataga 4663
Query: 435 gcccctggaaccttgcatgcttccaatgctggttatcctcctgctggaagctctagtagc 494
||||| | | |||||||| || ||||| || | |||||||||||||||||| |
Sbjct: 4664 gcccc------catccatgcttcatattctggtcatgcacctgctggaagctctagtggt 4717
Query: 495 aactatgcaccatacaatactcaacatgtgccttctttaagctatccacatagatccgag 554
| ||||||||||||||||||||||||| ||||| ||| |||||||||||| ||||||||
Sbjct: 4718 agctatgcaccatacaatactcaacatatgcctgcttcaagctatccacacggatccgag 4777
Query: 555 gatagttttattcctggagtccatgtggatgacagaagggttgcaccgaagcgcagaaat 614
|||| ||| ||||| | ||||||||||| ||||||||||||| |||| | ||||||
Sbjct: 4778 gataatttcattccaagttcccatgtggatggcagaagggttgcattgaagagaagaaat 4837
Query: 615 cccatcactcatcctgtggatggtgtcagtgctggaggctattatcctggcagttcttcc 674
||||||| ||||||| ||||| || ||| |||| |||||| ||||||||||||||
Sbjct: 4838 cccatcattcatcctacagatggattcggtgttggaaattattatgctggcagttcttcc 4897
Query: 675 aataatcagttctct 689
|||| ||||||||||
Sbjct: 4898 aatactcagttctct 4912
Score = 63.9 bits (32), Expect = 2e-06
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 1543 atgatcaaaacaatgaaagatgcataatttgcctggaggagtacaagcagaaggactccc 1602
||||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| | |
Sbjct: 5874 atgatcaggacaatgaaagatgtgtaatctgcctggaggaatacaagcatgaggacacac 5933
Query: 1603 ttgggaagctgaaatg 1618
|||||| |||||||||
Sbjct: 5934 ttgggaggctgaaatg 5949
Score = 60.0 bits (30), Expect = 3e-05
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1641 tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
|||||||||||||||||| |||||||| || ||||||| ||||| |||||
Sbjct: 5972 tgcatcaagaagtggctgcaggtgaaggacacctgcccagtttgcaaagc 6021
>dbj|AK073342.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033030D14, full
insert sequence
Length = 2057
Score = 365 bits (184), Expect = 4e-97
Identities = 277/308 (89%)
Strand = Plus / Plus
Query: 1212 ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
|||||||| || ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1334 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 1393
Query: 1272 tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
|||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 1394 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 1453
Query: 1332 cgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctcac 1391
|| |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||||
Sbjct: 1454 cggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctcac 1513
Query: 1392 tgggacatgagactggacattgatgacatgagctatgaggagctcctggcgttggaagaa 1451
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1514 tgggacatgagactggacattgatgacatgagctatgaggagctgctggctttggaagaa 1573
Query: 1452 cgaataggcagtgtaaacactggcctggctgatgaaaaaatctcaggatgtgtgatggag 1511
|| |||||| ||| ||||||||||| |||||||| ||||| || || ||||||||||||
Sbjct: 1574 cgcataggccatgtgaacactggcctcgctgatgagaaaatttctggctgtgtgatggag 1633
Query: 1512 ctagcctg 1519
|||||||
Sbjct: 1634 gtagcctg 1641
Score = 321 bits (162), Expect = 5e-84
Identities = 311/360 (86%), Gaps = 3/360 (0%)
Strand = Plus / Plus
Query: 754 tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
||||||||| ||||||||| ||||| | | |||||||| |||||||||||||||||| |
Sbjct: 765 tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 824
Query: 814 tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
||||||| | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 825 tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 884
Query: 874 catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 885 cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 944
Query: 934 caccagtacaacgggaaagagctcctttatctctacctcccagaattgtccccccaggga 993
||||||||||||| || ||||||||||||||| | | ||| |||||| | || ||||||
Sbjct: 945 caccagtacaacgtgacagagctcctttatctgtgcatccaagaattcttcctccagggc 1004
Query: 994 cagatggaagcaccggtatagcattcagagagaggccatactatcctgctccacagggca 1053
| ||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1005 ctgatggtagcagc---atagcattcagagagaggccatactatcctgctccacagagca 1061
Query: 1054 ccaacataagtgcccctgtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 1062 ccaacataagtgcacctgtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 1121
Score = 214 bits (108), Expect = 9e-52
Identities = 398/495 (80%), Gaps = 6/495 (1%)
Strand = Plus / Plus
Query: 195 tgatcagactgtacatgagtcatggctgggcatcattatcacaattcccagatgtcaaga 254
|||||||| ||| || | || |||||||| ||||| ||| | |||||||||||||| |
Sbjct: 215 tgatcagattgttcacgtgttatggctggacatcagtataataattcccagatgtcccgg 274
Query: 255 atggatcgtatgaaccagccacgtaatgaacctccgccttttggtcaaaagttatttatg 314
||||||| |||| || || | ||||||||||| |||||||| |||||||||||||||
Sbjct: 275 atggatcatatggacaggctaaacaatgaacctccaccttttggccaaaagttatttatg 334
Query: 315 catcctagaggtgatgcacctaatggagcgggaccatcaggttttgggggtacaactgtg 374
|||||||| ||||| || |||| ||||| ||| | || || | || ||||| || ||
Sbjct: 335 catcctaggagtgatccagctaacggagctggatcgtctggctatgtgggtaacacaatg 394
Query: 375 agatctaatgaacttccatcctcaagctacactggtcagtcttatggtcagcagattgga 434
||||| ||||| ||||| || ||||| || |||| || ||||||||||||||| | ||
Sbjct: 395 agatcgaatgatcttccgtcttcaagttatgctggccaagcttatggtcagcagaataga 454
Query: 435 gcccctggaaccttgcatgcttccaatgctggttatcctcctgctggaagctctagtagc 494
||||| | | |||||||| || ||||| || | |||||||||||||||||| |
Sbjct: 455 gcccc------catccatgcttcatattctggtcatgcacctgctggaagctctagtggt 508
Query: 495 aactatgcaccatacaatactcaacatgtgccttctttaagctatccacatagatccgag 554
| ||||||||||||||||||||||||| ||||| ||| |||||||||||| ||||||||
Sbjct: 509 agctatgcaccatacaatactcaacatatgcctgcttcaagctatccacacggatccgag 568
Query: 555 gatagttttattcctggagtccatgtggatgacagaagggttgcaccgaagcgcagaaat 614
|||| ||| ||||| | ||||||||||| ||||||||||||| |||| | ||||||
Sbjct: 569 gataatttcattccaagttcccatgtggatggcagaagggttgcattgaagagaagaaat 628
Query: 615 cccatcactcatcctgtggatggtgtcagtgctggaggctattatcctggcagttcttcc 674
||||||| ||||||| ||||| || ||| |||| |||||| ||||||||||||||
Sbjct: 629 cccatcattcatcctacagatggattcggtgttggaaattattatgctggcagttcttcc 688
Query: 675 aataatcagttctct 689
|||| ||||||||||
Sbjct: 689 aatactcagttctct 703
Score = 67.9 bits (34), Expect = 1e-07
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1641 tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
|||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 1763 tgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagc 1812
Score = 63.9 bits (32), Expect = 2e-06
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 1543 atgatcaaaacaatgaaagatgcataatttgcctggaggagtacaagcagaaggactccc 1602
||||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| | |
Sbjct: 1665 atgatcaggacaatgaaagatgtgtaatctgcctggaggaatacaagcatgaggacacac 1724
Query: 1603 ttgggaagctgaaatg 1618
|||||| |||||||||
Sbjct: 1725 ttgggaggctgaaatg 1740
>gb|AC124144.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0099P06, complete sequence
Length = 135117
Score = 190 bits (96), Expect = 1e-44
Identities = 183/212 (86%)
Strand = Plus / Minus
Query: 754 tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
||||||||| ||||||||| ||||| | | |||||||| |||||||||||||||||| |
Sbjct: 82180 tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 82121
Query: 814 tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
||||||| | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 82120 tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 82061
Query: 874 catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 82060 cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 82001
Query: 934 caccagtacaacgggaaagagctcctttatct 965
||||||||||||| || |||||||||||||||
Sbjct: 82000 caccagtacaacgtgacagagctcctttatct 81969
Score = 180 bits (91), Expect = 1e-41
Identities = 315/390 (80%), Gaps = 6/390 (1%)
Strand = Plus / Minus
Query: 300 caaaagttatttatgcatcctagaggtgatgcacctaatggagcgggaccatcaggtttt 359
||||||||||||||||||||||| ||||| || |||| ||||| ||| | || || | |
Sbjct: 82625 caaaagttatttatgcatcctaggagtgatccagctaacggagctggatcgtctggctat 82566
Query: 360 gggggtacaactgtgagatctaatgaacttccatcctcaagctacactggtcagtcttat 419
| ||||| || ||||||| ||||| ||||| || ||||| || |||| || |||||
Sbjct: 82565 gtgggtaacacaatgagatcgaatgatcttccgtcttcaagttatgctggccaagcttat 82506
Query: 420 ggtcagcagattggagcccctggaaccttgcatgcttccaatgctggttatcctcctgct 479
|||||||||| | ||||||| | | |||||||| || ||||| || | ||||||
Sbjct: 82505 ggtcagcagaatagagcccc------catccatgcttcatattctggtcatgcacctgct 82452
Query: 480 ggaagctctagtagcaactatgcaccatacaatactcaacatgtgccttctttaagctat 539
|||||||||||| | | ||||||||||||||||||||||||| ||||| ||| |||||||
Sbjct: 82451 ggaagctctagtggtagctatgcaccatacaatactcaacatatgcctgcttcaagctat 82392
Query: 540 ccacatagatccgaggatagttttattcctggagtccatgtggatgacagaagggttgca 599
||||| |||||||||||| ||| ||||| | ||||||||||| |||||||||||||
Sbjct: 82391 ccacacggatccgaggataatttcattccaagttcccatgtggatggcagaagggttgca 82332
Query: 600 ccgaagcgcagaaatcccatcactcatcctgtggatggtgtcagtgctggaggctattat 659
|||| | ||||||||||||| ||||||| ||||| || ||| |||| ||||||
Sbjct: 82331 ttgaagagaagaaatcccatcattcatcctacagatggattcggtgttggaaattattat 82272
Query: 660 cctggcagttcttccaataatcagttctct 689
|||||||||||||||||| ||||||||||
Sbjct: 82271 gctggcagttcttccaatactcagttctct 82242
Score = 157 bits (79), Expect = 2e-34
Identities = 97/103 (94%)
Strand = Plus / Minus
Query: 1011 atagcattcagagagaggccatactatcctgctccacagggcaccaacataagtgcccct 1070
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 81583 atagcattcagagagaggccatactatcctgctccacagagcaccaacataagtgcacct 81524
Query: 1071 gtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
||||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 81523 gtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 81481
Score = 147 bits (74), Expect = 2e-31
Identities = 95/102 (93%)
Strand = Plus / Minus
Query: 1330 agcgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctc 1389
|||| |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 81069 agcggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctc 81010
Query: 1390 actgggacatgagactggacattgatgacatgagctatgagg 1431
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81009 actgggacatgagactggacattgatgacatgagctatgagg 80968
Score = 143 bits (72), Expect = 3e-30
Identities = 108/120 (90%)
Strand = Plus / Minus
Query: 1212 ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
|||||||| || ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 81268 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 81209
Query: 1272 tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
|||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 81208 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 81149
Score = 85.7 bits (43), Expect = 5e-13
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 1429 aggagctcctggcgttggaagaacgaataggcagtgtaaacactggcctggctgatgaaa 1488
||||||| ||||| ||||||||||| |||||| ||| ||||||||||| |||||||| |
Sbjct: 80889 aggagctgctggctttggaagaacgcataggccatgtgaacactggcctcgctgatgaga 80830
Query: 1489 aaatctcaggatgtgtgatggagctagcctg 1519
|||| || || |||||||||||| |||||||
Sbjct: 80829 aaatttctggctgtgtgatggaggtagcctg 80799
Score = 67.9 bits (34), Expect = 1e-07
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1641 tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
|||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 80574 tgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagc 80525
>dbj|AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
Length = 29737217
Score = 190 bits (96), Expect = 1e-44
Identities = 183/212 (86%)
Strand = Plus / Minus
Query: 754 tgggttcgagccactggaacgatcatcagtttgttaatcctgaaggatctcagaggaacg 813
||||||||| ||||||||| ||||| | | |||||||| |||||||||||||||||| |
Sbjct: 3659833 tgggttcgaaccactggaatgatcaccgctatgttaatcatgaaggatctcagaggaatg 3659774
Query: 814 tgagggggcgccacgaccatagttctatccattcggaatataattcatctacaacttgcc 873
||||||| | || || |||||| ||||||||| |||| | | | || || || ||||||
Sbjct: 3659773 tgaggggaagacatgatcatagtactatccatttggaacaaagtccagctgcagcttgcc 3659714
Query: 874 catcaagcagtattcatgtgccaccataccatccaaatgcaaatgctccttttggaagtg 933
| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3659713 cgtcaagcagcatcaatgtgccaccataccatccaaatgcaaatggtccttttggaagtg 3659654
Query: 934 caccagtacaacgggaaagagctcctttatct 965
||||||||||||| || |||||||||||||||
Sbjct: 3659653 caccagtacaacgtgacagagctcctttatct 3659622
Score = 180 bits (91), Expect = 1e-41
Identities = 315/390 (80%), Gaps = 6/390 (1%)
Strand = Plus / Minus
Query: 300 caaaagttatttatgcatcctagaggtgatgcacctaatggagcgggaccatcaggtttt 359
||||||||||||||||||||||| ||||| || |||| ||||| ||| | || || | |
Sbjct: 3660278 caaaagttatttatgcatcctaggagtgatccagctaacggagctggatcgtctggctat 3660219
Query: 360 gggggtacaactgtgagatctaatgaacttccatcctcaagctacactggtcagtcttat 419
| ||||| || ||||||| ||||| ||||| || ||||| || |||| || |||||
Sbjct: 3660218 gtgggtaacacaatgagatcgaatgatcttccgtcttcaagttatgctggccaagcttat 3660159
Query: 420 ggtcagcagattggagcccctggaaccttgcatgcttccaatgctggttatcctcctgct 479
|||||||||| | ||||||| | | |||||||| || ||||| || | ||||||
Sbjct: 3660158 ggtcagcagaatagagcccc------catccatgcttcatattctggtcatgcacctgct 3660105
Query: 480 ggaagctctagtagcaactatgcaccatacaatactcaacatgtgccttctttaagctat 539
|||||||||||| | | ||||||||||||||||||||||||| ||||| ||| |||||||
Sbjct: 3660104 ggaagctctagtggtagctatgcaccatacaatactcaacatatgcctgcttcaagctat 3660045
Query: 540 ccacatagatccgaggatagttttattcctggagtccatgtggatgacagaagggttgca 599
||||| |||||||||||| ||| ||||| | ||||||||||| |||||||||||||
Sbjct: 3660044 ccacacggatccgaggataatttcattccaagttcccatgtggatggcagaagggttgca 3659985
Query: 600 ccgaagcgcagaaatcccatcactcatcctgtggatggtgtcagtgctggaggctattat 659
|||| | ||||||||||||| ||||||| ||||| || ||| |||| ||||||
Sbjct: 3659984 ttgaagagaagaaatcccatcattcatcctacagatggattcggtgttggaaattattat 3659925
Query: 660 cctggcagttcttccaataatcagttctct 689
|||||||||||||||||| ||||||||||
Sbjct: 3659924 gctggcagttcttccaatactcagttctct 3659895
Score = 157 bits (79), Expect = 2e-34
Identities = 97/103 (94%)
Strand = Plus / Minus
Query: 1011 atagcattcagagagaggccatactatcctgctccacagggcaccaacataagtgcccct 1070
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 3659236 atagcattcagagagaggccatactatcctgctccacagagcaccaacataagtgcacct 3659177
Query: 1071 gtgccaacgcttcctggttcttctgacggtgcaccatttgctc 1113
||||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 3659176 gtgccaacgcttcctatttcttgtgacagtgcaccatttgctc 3659134
Score = 147 bits (74), Expect = 2e-31
Identities = 95/102 (93%)
Strand = Plus / Minus
Query: 1330 agcgttttatgatgctggaccagttagtcatccacgaatctagagaagcattagaccctc 1389
|||| |||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 3658722 agcggtttatgatgctggatcagttagttatccatgaatcaagagaagcattcgatcctc 3658663
Query: 1390 actgggacatgagactggacattgatgacatgagctatgagg 1431
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3658662 actgggacatgagactggacattgatgacatgagctatgagg 3658621
Score = 143 bits (72), Expect = 3e-30
Identities = 108/120 (90%)
Strand = Plus / Minus
Query: 1212 ccaaggcacgtctctgtagggcatggtggtagtgcaaggagtagaaggatgagggattcc 1271
|||||||| || ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3658921 ccaaggcatgtatctgtagggggcagtggtagtgcaaggagtagaaggatgagggattcc 3658862
Query: 1272 tatcattgttttcatcctttgatgattgaggacaataaccttggaagatcggcagctgag 1331
|||||| ||||||||| |||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 3658861 tatcatggttttcatcatttgatgattgaagacaataacttgggaagatcagcagctgag 3658802
Score = 85.7 bits (43), Expect = 5e-13
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 1429 aggagctcctggcgttggaagaacgaataggcagtgtaaacactggcctggctgatgaaa 1488
||||||| ||||| ||||||||||| |||||| ||| ||||||||||| |||||||| |
Sbjct: 3658542 aggagctgctggctttggaagaacgcataggccatgtgaacactggcctcgctgatgaga 3658483
Query: 1489 aaatctcaggatgtgtgatggagctagcctg 1519
|||| || || |||||||||||| |||||||
Sbjct: 3658482 aaatttctggctgtgtgatggaggtagcctg 3658452
Score = 67.9 bits (34), Expect = 1e-07
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1641 tgcatcaagaagtggctggaggtgaagaacgcctgcccggtttgtaaagc 1690
|||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 3658227 tgcatcaagaagtggctgcaggtgaagaacacctgcccagtttgcaaagc 3658178
>dbj|AB058723.1 | Homo sapiens mRNA for KIAA1820 protein, partial cds
Length = 5915
Score = 42.1 bits (21), Expect = 7.3
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 983 ccccccagggacagatggaag 1003
|||||||||||||||||||||
Sbjct: 3567 ccccccagggacagatggaag 3587
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 346,069,102
Number of extensions: 18770487
Number of successful extensions: 366448
Number of sequences better than 10.0: 90
Number of HSP's gapped: 366432
Number of HSP's successfully gapped: 134
Length of query: 1917
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1894
Effective length of database: 18,503,978,556
Effective search space: 35046535385064
Effective search space used: 35046535385064
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)