ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf82l19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120K21, full insert sequence Length = 1764 Score = 1350 bits (681), Expect = 0.0 Identities = 1184/1354 (87%) Strand = Plus / Plus Query: 151 gatggatcgcgccgagctcaccacggagcaggttctcaagcgggacattccatgggagac 210 |||||||| ||| ||||| ||||| ||||||||||||||| |||| ||||||||||| | Sbjct: 114 gatggatcacgcggagctgaccaccgagcaggttctcaagagggatattccatgggaatc 173 Query: 211 atatatgtcaactaaactgatcacttcgacatgccttcagcttttaaggcgttatgacca 270 ||| ||| ||| ||| ||||| | |||||||||||||||||| | ||||||||||| Sbjct: 174 atacatggcaaataagctgatttccgggacatgccttcagcttttgcgacgttatgacca 233 Query: 271 caaaccagaaagtcagagaggtccgttgcttgatgaggatggaccatcgtatgttcatgn 330 |||||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| | Sbjct: 234 caaaccagaaagccaacgaggtcctttgcttgatgaggatgggccatcctatgttcgagt 293 Query: 331 nnnnnngaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccct 390 |||||||||||| | |||||| |||||||| || || ||||||||||||||||| Sbjct: 294 gttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccct 353 Query: 391 cattgatgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctct 450 ||||||||||||||||||| ||||||||||||||||||||||| || || || ||||| Sbjct: 354 gattgatgagatgcttgcagtaaatcctaaacgagcagcactgttctatgataactctct 413 Query: 451 ctctggtgaagacatttacgatcctttcctaagactgctcttgaaaggtaactggttcgt 510 ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| || Sbjct: 414 ctctggtgaagacatctacgaccctttcctaagattgctcttgaaaggtaactggtttgt 473 Query: 511 acaggaaaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcagaa 570 || ||||| || |||||||||||||| || |||||||||| |||| ||| | ||||| Sbjct: 474 gcaagaaaaaagttgtaagatattgacccaaataataagtgcacgacccaagatgcagaa 533 Query: 571 cggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatga 630 ||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| || Sbjct: 534 tggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaaga 593 Query: 631 tgtgttaaagggcttggttgattggctctgttctcagctcaggaaccccacccacccgaa 690 |||||||| || |||||||||||||||||||||||||| ||||| || |||||||| || Sbjct: 594 tgtgttaagaggtttggttgattggctctgttctcagctgaggaatcctacccacccaaa 653 Query: 691 ctgttctattcctactgctacccattgcctcgccactttgctgaaggagacatatgttag 750 ||||||| |||||||||||| ||||| || ||||||||||| | ||| |||||||| Sbjct: 654 ctgttctgttcctactgctatgcattgtcttgccactttgctaagagagcagtatgttag 713 Query: 751 aaccttgtttgttcaggcagatggtgtaaaactgctcattcctttaatatctccagcctc 810 | | || ||||||||||| ||||||||||||||||||||||||||||| |||||||| || Sbjct: 714 agctttatttgttcaggcggatggtgtaaaactgctcattcctttaatttctccagcttc 773 Query: 811 aacacaacagtcaattcagctcctctacgaaacttgcctttgtatatggcttttatcctt 870 ||||||||||| || ||||| ||||||||||||||||| || || |||||||||||||| Sbjct: 774 cacacaacagtcgatccagcttctctacgaaacttgcctctgcatctggcttttatcctt 833 Query: 871 ctatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagatgt 930 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 834 ttatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagaggt 893 Query: 931 tgtcaaaggctctactaaagagaaggttgtcagagttgttgtgatgtccttccgcaattt 990 ||| ||||| || || ||||||||||||||||| || ||| | ||||| |||| || || Sbjct: 894 tgtgaaaggttcaacaaaagagaaggttgtcagggtcgttatcatgtctatccgtaactt 953 Query: 991 gttggcaaagggtgcatttgctgcccaaatgattgatcttgggttgccgcatatagtaca 1050 | | ||||||||||| |||||||||||||||||||||||||| |||| || |||||||| Sbjct: 954 gcttgcaaagggtgcgtttgctgcccaaatgattgatcttggactgccacacatagtaca 1013 Query: 1051 gaatctgaaagctcaagcatggagtgatgaggatttgttagatgcactgaatcaactaga 1110 |||| |||||||||||||||||| |||||||||||| |||||||| |||||||| ||||| Sbjct: 1014 gaatttgaaagctcaagcatggactgatgaggatttattagatgcgctgaatcagctaga 1073 Query: 1111 agtgggtctcaaagagaacctcaagaggttgagctcatttgataagtacaaacagcaagt 1170 | | || |||||||| ||||| |||| |||||| |||||||| |||||||| || ||||| Sbjct: 1074 aataggactcaaagacaaccttaagaagttgagttcatttgagaagtacaagcaacaagt 1133 Query: 1171 gcttcttggccatcttgattggtctccaatgcacaaagacccaaatttctggcgagagaa 1230 ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1134 tcttcttggccatcttgactggtctccaatgcacaaagacccaagtttctggcgcgagaa 1193 Query: 1231 tatcactaactttgaggaaaatgatttccagatcctacgtgtccttatgacagtcatcga 1290 || | ||| ||||| ||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 1194 cattaataattttgaagaaaatgatttccagattctacgtgtgcttatgacaatcatcga 1253 Query: 1291 cacatcaaccgacaccactgctcttgcagtcgcctgctatgacctctcacagttccttca 1350 |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1254 cacatcggccgacacgactgctcttgctgtcgcctgctatgacctctcacagttccttca 1313 Query: 1351 gtaccacccttctggccgcctagtggtggcagacctcaaggcaaaggaccgagtcatgaa 1410 ||||||||||||||| ||| | ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1314 gtaccacccttctgggcgcattgtggtggcagatctgaaggcgaaggaccgagtgatgaa 1373 Query: 1411 actcatgaaccacgacaacgccgaagtgaggaagaactccctgctctgcgtgcagaggct 1470 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1374 gctcatgaaccacgagaacgccgaagtgaggaagaatgccctgctctgcgtgcagaggct 1433 Query: 1471 cttcctcggcgccaagtatgctagcttcctgcag 1504 ||||| || || ||||| || |||||||||||| Sbjct: 1434 tttccttggtgcgaagtacgcgagcttcctgcag 1467 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/43 (90%), Gaps = 2/43 (4%) Strand = Plus / Plus Query: 1662 tgtataataaataatctcagctatggcttgctcgatgtaataa 1704 |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 1631 tgtataataaataatc--agctattccttgctcgatgtaataa 1671
>emb|CT829548.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104E14, full insert sequence Length = 1789 Score = 1336 bits (674), Expect = 0.0 Identities = 1184/1355 (87%), Gaps = 1/1355 (0%) Strand = Plus / Plus Query: 151 gatggatcgcgccgagctcaccacggagcaggttctcaagcgggacattccatgggagac 210 |||||||| ||| ||||| ||||| ||||||||||||||| |||| ||||||||||| | Sbjct: 119 gatggatcacgcggagctgaccaccgagcaggttctcaagagggatattccatgggaatc 178 Query: 211 atatatgtcaactaaactgatcacttcgacatgccttcagcttttaaggcgttatgacca 270 ||| ||| ||| ||| ||||| | |||||||||||||||||| | ||||||||||| Sbjct: 179 atacatggcaaataagctgatttccgggacatgccttcagcttttgcgacgttatgacca 238 Query: 271 caaaccagaaagtcagagaggtccgttgcttgatgaggatggaccatcgtatgttcatgn 330 |||||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| | Sbjct: 239 caaaccagaaagccaacgaggtcctttgcttgatgaggatgggccatcctatgttcgagt 298 Query: 331 nnnnnngaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccct 390 |||||||||||| | |||||| |||||||| || || ||||||||||||||||| Sbjct: 299 gttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccct 358 Query: 391 cattgatgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctct 450 ||||||||||||||||||| ||||||||||||||||||||||| || || || ||||| Sbjct: 359 gattgatgagatgcttgcagtaaatcctaaacgagcagcactgttctatgataactctct 418 Query: 451 ctctggtgaagacatttacgatcctttcctaagactgctcttgaaaggtaactggttcgt 510 ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| || Sbjct: 419 ctctggtgaagacatctacgaccctttcctaagattgctcttgaaaggtaactggtttgt 478 Query: 511 acaggaaaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcagaa 570 || ||||| || |||||||||||||| || |||||||||| |||| ||| | ||||| Sbjct: 479 gcaagaaaaaagttgtaagatattgacccaaataataagtgcacgacccaagatgcagaa 538 Query: 571 cggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatga 630 ||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| || Sbjct: 539 tggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaaga 598 Query: 631 tgtgttaaagggcttggttgattggctctgttctcagctcaggaaccccacccacccgaa 690 |||||||| || |||||||||||||||||||||||||| ||||| || |||||||| || Sbjct: 599 tgtgttaagaggtttggttgattggctctgttctcagctgaggaatcctacccacccaaa 658 Query: 691 ctgttctattcctactgctacccattgcctcgccactttgctgaaggagacatatgttag 750 ||||||| |||||||||||| ||||| || ||||||||||| | ||| |||||||| Sbjct: 659 ctgttctgttcctactgctatgcattgtcttgccactttgctaagagagcagtatgttag 718 Query: 751 aaccttgtttgttcaggcagatggtgtaaaactgctcattcctttaatatctccagcctc 810 | | || ||||||||||| ||||||||||||||||||||||||||||| |||||||| || Sbjct: 719 agctttatttgttcaggcggatggtgtaaaactgctcattcctttaatttctccagcttc 778 Query: 811 aacacaacagtcaattcagctcctctacgaaacttgcctttgtatatggcttttatcctt 870 ||||||||||| || ||||| ||||||||||||||||| || || |||||||||||||| Sbjct: 779 cacacaacagtcgatccagcttctctacgaaacttgcctctgcatctggcttttatcctt 838 Query: 871 ctatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagatgt 930 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 839 ttatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagaggt 898 Query: 931 tgtcaaaggctctactaaagag-aaggttgtcagagttgttgtgatgtccttccgcaatt 989 ||| ||||| || || |||||| ||||||||||| || ||| | ||||| |||| || | Sbjct: 899 tgtgaaaggttcaacaaaagaggaaggttgtcagggtcgttatcatgtctatccgtaact 958 Query: 990 tgttggcaaagggtgcatttgctgcccaaatgattgatcttgggttgccgcatatagtac 1049 || | ||||||||||| |||||||||||||||||||||||||| |||| || ||||||| Sbjct: 959 tgcttgcaaagggtgcgtttgctgcccaaatgattgatcttggactgccacacatagtac 1018 Query: 1050 agaatctgaaagctcaagcatggagtgatgaggatttgttagatgcactgaatcaactag 1109 ||||| |||||||||||||||||| |||||||||||| |||||||| |||||||| |||| Sbjct: 1019 agaatttgaaagctcaagcatggactgatgaggatttattagatgcgctgaatcagctag 1078 Query: 1110 aagtgggtctcaaagagaacctcaagaggttgagctcatttgataagtacaaacagcaag 1169 || | || |||||||| ||||| |||| |||||| |||||||| |||||||| || |||| Sbjct: 1079 aaataggactcaaagacaaccttaagaagttgagttcatttgagaagtacaagcaacaag 1138 Query: 1170 tgcttcttggccatcttgattggtctccaatgcacaaagacccaaatttctggcgagaga 1229 | ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 1139 ttcttcttggccatcttgactggtctccaatgcacaaagacccaagtttctggcgcgaga 1198 Query: 1230 atatcactaactttgaggaaaatgatttccagatcctacgtgtccttatgacagtcatcg 1289 | || | ||| ||||| ||||||||||||||||| |||||||| ||||||||| |||||| Sbjct: 1199 acattaataattttgaagaaaatgatttccagattctacgtgtgcttatgacaatcatcg 1258 Query: 1290 acacatcaaccgacaccactgctcttgcagtcgcctgctatgacctctcacagttccttc 1349 ||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1259 acacatcggccgacacgactgctcttgctgtcgcctgctatgacctctcacagttccttc 1318 Query: 1350 agtaccacccttctggccgcctagtggtggcagacctcaaggcaaaggaccgagtcatga 1409 |||||||||||||||| ||| | ||||||||||| || ||||| ||||||||||| |||| Sbjct: 1319 agtaccacccttctgggcgcattgtggtggcagatctgaaggcgaaggaccgagttatga 1378 Query: 1410 aactcatgaaccacgacaacgccgaagtgaggaagaactccctgctctgcgtgcagaggc 1469 | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1379 agctcatgaaccacgagaacgccgaagtgaggaagaatgccctgctctgcgtgcagaggc 1438 Query: 1470 tcttcctcggcgccaagtatgctagcttcctgcag 1504 | ||||| || || ||||| || |||||||||||| Sbjct: 1439 ttttccttggtgcgaagtacgcgagcttcctgcag 1473 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/43 (90%), Gaps = 2/43 (4%) Strand = Plus / Plus Query: 1662 tgtataataaataatctcagctatggcttgctcgatgtaataa 1704 |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 1637 tgtataataaataatc--agctattccttgctcgatgtaataa 1677
>ref|NM_001066469.1| Oryza sativa (japonica cultivar-group) Os07g0549700 (Os07g0549700) mRNA, partial cds Length = 1762 Score = 1334 bits (673), Expect = 0.0 Identities = 1183/1354 (87%), Gaps = 1/1354 (0%) Strand = Plus / Plus Query: 151 gatggatcgcgccgagctcaccacggagcaggttctcaagcgggacattccatgggagac 210 |||||||| ||| ||||| ||||| ||||||||||||||| |||| ||||||||||| | Sbjct: 113 gatggatcacgcggagctgaccaccgagcaggttctcaagagggatattccatgggaatc 172 Query: 211 atatatgtcaactaaactgatcacttcgacatgccttcagcttttaaggcgttatgacca 270 ||| ||| ||| ||| ||||| | |||||||||||||||||| | ||||||||||| Sbjct: 173 atacatggcaaataagctgatttccgggacatgccttcagcttttgcgacgttatgacca 232 Query: 271 caaaccagaaagtcagagaggtccgttgcttgatgaggatggaccatcgtatgttcatgn 330 |||||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| | Sbjct: 233 caaaccagaaagccaacgaggtcctttgcttgatgaggatgggccatcctatgttcgagt 292 Query: 331 nnnnnngaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccct 390 |||||||||||| | |||||| |||||||| || || ||||||||||||||||| Sbjct: 293 gttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccct 352 Query: 391 cattgatgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctct 450 ||||||||||||||||||| ||||||||||||||||||||||| || || || ||||| Sbjct: 353 gattgatgagatgcttgcagtaaatcctaaacgagcagcactgttctatgataactctct 412 Query: 451 ctctggtgaagacatttacgatcctttcctaagactgctcttgaaaggtaactggttcgt 510 ||||||||||||||| ||||| |||||||||| | |||||||||||||||||||||| || Sbjct: 413 ctctggtgaagacatctacgaccctttcctaa-attgctcttgaaaggtaactggtttgt 471 Query: 511 acaggaaaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcagaa 570 || ||||| || |||||||||||||| || |||||||||| |||| ||| | ||||| Sbjct: 472 gcaagaaaaaagttgtaagatattgacccaaataataagtgcacgacccaagatgcagaa 531 Query: 571 cggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatga 630 ||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| || Sbjct: 532 tggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaaga 591 Query: 631 tgtgttaaagggcttggttgattggctctgttctcagctcaggaaccccacccacccgaa 690 |||||||| || |||||||||||||||||||||||||| ||||| || |||||||| || Sbjct: 592 tgtgttaagaggtttggttgattggctctgttctcagctgaggaatcctacccacccaaa 651 Query: 691 ctgttctattcctactgctacccattgcctcgccactttgctgaaggagacatatgttag 750 ||||||| |||||||||||| ||||| || ||||||||||| | ||| |||||||| Sbjct: 652 ctgttctgttcctactgctatgcattgtcttgccactttgctaagagagcagtatgttag 711 Query: 751 aaccttgtttgttcaggcagatggtgtaaaactgctcattcctttaatatctccagcctc 810 | | || ||||||||||| ||||||||||||||||||||||||||||| |||||||| || Sbjct: 712 agctttatttgttcaggcggatggtgtaaaactgctcattcctttaatttctccagcttc 771 Query: 811 aacacaacagtcaattcagctcctctacgaaacttgcctttgtatatggcttttatcctt 870 ||||||||||| || ||||| ||||||||||||||||| || || |||||||||||||| Sbjct: 772 cacacaacagtcgatccagcttctctacgaaacttgcctctgcatctggcttttatcctt 831 Query: 871 ctatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagatgt 930 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 832 ttatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagaggt 891 Query: 931 tgtcaaaggctctactaaagagaaggttgtcagagttgttgtgatgtccttccgcaattt 990 ||| ||||| || || ||||||||||||||||| || ||| | ||||| |||| || || Sbjct: 892 tgtgaaaggttcaacaaaagagaaggttgtcagggtcgttatcatgtctatccgtaactt 951 Query: 991 gttggcaaagggtgcatttgctgcccaaatgattgatcttgggttgccgcatatagtaca 1050 | | ||||||||||| |||||||||||||||||||||||||| |||| || |||||||| Sbjct: 952 gcttgcaaagggtgcgtttgctgcccaaatgattgatcttggactgccacacatagtaca 1011 Query: 1051 gaatctgaaagctcaagcatggagtgatgaggatttgttagatgcactgaatcaactaga 1110 |||| |||||||||||||||||| |||||||||||| |||||||| |||||||| ||||| Sbjct: 1012 gaatttgaaagctcaagcatggactgatgaggatttattagatgcgctgaatcagctaga 1071 Query: 1111 agtgggtctcaaagagaacctcaagaggttgagctcatttgataagtacaaacagcaagt 1170 | | || |||||||| ||||| |||| |||||| |||||||| |||||||| || ||||| Sbjct: 1072 aataggactcaaagacaaccttaagaagttgagttcatttgagaagtacaagcaacaagt 1131 Query: 1171 gcttcttggccatcttgattggtctccaatgcacaaagacccaaatttctggcgagagaa 1230 ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1132 tcttcttggccatcttgactggtctccaatgcacaaagacccaagtttctggcgcgagaa 1191 Query: 1231 tatcactaactttgaggaaaatgatttccagatcctacgtgtccttatgacagtcatcga 1290 || | ||| ||||| ||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 1192 cattaataattttgaagaaaatgatttccagattctacgtgtgcttatgacaatcatcga 1251 Query: 1291 cacatcaaccgacaccactgctcttgcagtcgcctgctatgacctctcacagttccttca 1350 |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1252 cacatcggccgacacgactgctcttgctgtcgcctgctatgacctctcacagttccttca 1311 Query: 1351 gtaccacccttctggccgcctagtggtggcagacctcaaggcaaaggaccgagtcatgaa 1410 ||||||||||||||| ||| | ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1312 gtaccacccttctgggcgcattgtggtggcagatctgaaggcgaaggaccgagtgatgaa 1371 Query: 1411 actcatgaaccacgacaacgccgaagtgaggaagaactccctgctctgcgtgcagaggct 1470 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1372 gctcatgaaccacgagaacgccgaagtgaggaagaatgccctgctctgcgtgcagaggct 1431 Query: 1471 cttcctcggcgccaagtatgctagcttcctgcag 1504 ||||| || || ||||| || |||||||||||| Sbjct: 1432 tttccttggtgcgaagtacgcgagcttcctgcag 1465 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/43 (90%), Gaps = 2/43 (4%) Strand = Plus / Plus Query: 1662 tgtataataaataatctcagctatggcttgctcgatgtaataa 1704 |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 1629 tgtataataaataatc--agctattccttgctcgatgtaataa 1669
>dbj|AK104331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D11, full insert sequence Length = 1694 Score = 1334 bits (673), Expect = 0.0 Identities = 1182/1354 (87%) Strand = Plus / Plus Query: 151 gatggatcgcgccgagctcaccacggagcaggttctcaagcgggacattccatgggagac 210 |||||||| ||| ||||| ||||| ||||||||||||||| |||| ||||||||||| | Sbjct: 113 gatggatcacgcggagctgaccaccgagcaggttctcaagagggatattccatgggaatc 172 Query: 211 atatatgtcaactaaactgatcacttcgacatgccttcagcttttaaggcgttatgacca 270 ||| ||| ||| ||| |||| | |||||||||||||||||| | ||||||| ||| Sbjct: 173 atacatggcaaataagttgatttccgggacatgccttcagcttttgcgacgttatggcca 232 Query: 271 caaaccagaaagtcagagaggtccgttgcttgatgaggatggaccatcgtatgttcatgn 330 |||||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| | Sbjct: 233 caaaccagaaagccaacgaggtcctttgcttgatgaggatgggccatcctatgttcgagt 292 Query: 331 nnnnnngaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccct 390 |||||||||||| | |||||| |||||||| || || ||||||||||||||||| Sbjct: 293 gttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccct 352 Query: 391 cattgatgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctct 450 ||||||||||||||||||| ||||||||||||||||||||||| || || || ||||| Sbjct: 353 gattgatgagatgcttgcagtaaatcctaaacgagcagcactgttctatgataactctct 412 Query: 451 ctctggtgaagacatttacgatcctttcctaagactgctcttgaaaggtaactggttcgt 510 ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| || Sbjct: 413 ctctggtgaagacatctacgaccctttcctaagattgctcttgaaaggtaactggtttgt 472 Query: 511 acaggaaaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcagaa 570 || ||||| || |||||||||||||| || |||||||||| |||| ||| | ||||| Sbjct: 473 gcaagaaaaaagttgtaagatattgacccaaataataagtgcacgacccaagatgcagaa 532 Query: 571 cggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatga 630 ||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| || Sbjct: 533 tggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaaga 592 Query: 631 tgtgttaaagggcttggttgattggctctgttctcagctcaggaaccccacccacccgaa 690 |||||||| || |||||||||||||||||||||||||| ||||| || |||||||| || Sbjct: 593 tgtgttaagaggtttggttgattggctctgttctcagctgaggaatcctacccacccaaa 652 Query: 691 ctgttctattcctactgctacccattgcctcgccactttgctgaaggagacatatgttag 750 ||||||| |||||||||||| ||||| || ||||||||||| | ||| |||||||| Sbjct: 653 ctgttctgttcctactgctatgcattgtcttgccactttgctaagagagcagtatgttag 712 Query: 751 aaccttgtttgttcaggcagatggtgtaaaactgctcattcctttaatatctccagcctc 810 | | || ||||||||||| ||||||||||||||||||||||||||||| |||||||| || Sbjct: 713 agctttatttgttcaggcggatggtgtaaaactgctcattcctttaatttctccagcttc 772 Query: 811 aacacaacagtcaattcagctcctctacgaaacttgcctttgtatatggcttttatcctt 870 ||||||||||| || ||||| ||||||||||||||||| || || |||||||||||||| Sbjct: 773 cacacaacagtcgatccagcttctctacgaaacttgcctctgcatctggcttttatcctt 832 Query: 871 ctatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagatgt 930 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 833 ttatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagaggt 892 Query: 931 tgtcaaaggctctactaaagagaaggttgtcagagttgttgtgatgtccttccgcaattt 990 ||| ||||| || || ||||||||||||||||| || ||| | ||||| |||| || || Sbjct: 893 tgtgaaaggttcaacaaaagagaaggttgtcagggtcgttatcatgtctatccgtaactt 952 Query: 991 gttggcaaagggtgcatttgctgcccaaatgattgatcttgggttgccgcatatagtaca 1050 | | ||||||||||| |||||||||||||||||||||||||| |||| || |||||||| Sbjct: 953 gcttgcaaagggtgcgtttgctgcccaaatgattgatcttggactgccacacatagtaca 1012 Query: 1051 gaatctgaaagctcaagcatggagtgatgaggatttgttagatgcactgaatcaactaga 1110 |||| |||||||||||||||||| |||||||||||| |||||||| |||||||| ||||| Sbjct: 1013 gaatttgaaagctcaagcatggactgatgaggatttattagatgcgctgaatcagctaga 1072 Query: 1111 agtgggtctcaaagagaacctcaagaggttgagctcatttgataagtacaaacagcaagt 1170 | | || |||||||| ||||| |||| |||||| |||||||| |||||||| || ||||| Sbjct: 1073 aataggactcaaagacaaccttaagaagttgagttcatttgagaagtacaagcaacaagt 1132 Query: 1171 gcttcttggccatcttgattggtctccaatgcacaaagacccaaatttctggcgagagaa 1230 ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1133 tcttcttggccatcttgactggtctccaatgcacaaagacccaagtttctggcgcgagaa 1192 Query: 1231 tatcactaactttgaggaaaatgatttccagatcctacgtgtccttatgacagtcatcga 1290 || | ||| ||||| ||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 1193 cattaataattttgaagaaaatgatttccagattctacgtgtgcttatgacaatcatcga 1252 Query: 1291 cacatcaaccgacaccactgctcttgcagtcgcctgctatgacctctcacagttccttca 1350 |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1253 cacatcggccgacacgactgctcttgctgtcgcctgctatgacctctcacagttccttca 1312 Query: 1351 gtaccacccttctggccgcctagtggtggcagacctcaaggcaaaggaccgagtcatgaa 1410 ||||||||||||||| ||| | ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1313 gtaccacccttctgggcgcattgtggtggcagatctgaaggcgaaggaccgagtgatgaa 1372 Query: 1411 actcatgaaccacgacaacgccgaagtgaggaagaactccctgctctgcgtgcagaggct 1470 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1373 gctcatgaaccacgagaacgccgaagtgaggaagaatgccctgctctgcgtgcagaggct 1432 Query: 1471 cttcctcggcgccaagtatgctagcttcctgcag 1504 ||||| || || ||||| || |||||||||||| Sbjct: 1433 tttccttggtgcgaagtacgcgagcttcctgcag 1466 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/43 (90%), Gaps = 2/43 (4%) Strand = Plus / Plus Query: 1662 tgtataataaataatctcagctatggcttgctcgatgtaataa 1704 |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 1630 tgtataataaataatc--agctattccttgctcgatgtaataa 1670
>gb|AY108648.1| Zea mays PCO090155 mRNA sequence Length = 1795 Score = 1120 bits (565), Expect = 0.0 Identities = 1155/1354 (85%) Strand = Plus / Plus Query: 152 atggatcgcgccgagctcaccacggagcaggttctcaagcgggacattccatgggagaca 211 ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 146 atggatcgcgccgagctcaccacggagcaggttctcaagcgagatattccatgggagcat 205 Query: 212 tatatgtcaactaaactgatcacttcgacatgccttcagcttttaaggcgttatgaccac 271 || ||||||||||| || ||| | || ||||||||||||||| |||| ||||||||| Sbjct: 206 tacatgtcaactaagcttatctccggaacgtgccttcagcttttacggcgatatgaccac 265 Query: 272 aaaccagaaagtcagagaggtccgttgcttgatgaggatggaccatcgtatgttcatgnn 331 ||||| || || ||| ||| ||| || ||||| |||||||||||| | ||||| | | Sbjct: 266 aaaccggagagccagcgagctcctttacttgaggaggatggaccagcatatgtccgagtt 325 Query: 332 nnnnngaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccctc 391 ||||||| || | |||||||| ||||||||||| || ||||| |||||||||||| Sbjct: 326 ttcctgaatatcctgtggagcatctccaaggaagagactgttgaatacgtgcttgccctc 385 Query: 392 attgatgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctctc 451 |||||||| |||||||| | ||||||||||| ||||||||||||||||| ||||||| Sbjct: 386 attgatgaaatgcttgcgacaaatcctaaacgtgcagcactgttttacgatcaatctctg 445 Query: 452 tctggtgaagacatttacgatcctttcctaagactgctcttgaaaggtaactggttcgta 511 ||||||||||| ||||| || |||||| |||| || | | |||||| |||||||| ||| Sbjct: 446 tctggtgaagatatttatgagcctttcttaaggttgttatggaaaggcaactggtttgta 505 Query: 512 caggaaaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcagaac 571 || ||||| || ||||||||||||||| |||| ||||| |||| ||||||||||| Sbjct: 506 caagaaaaaagttgtaagatattgactgttataattagtgcacgaccaaagcttcagaat 565 Query: 572 ggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatgat 631 |||| ||||||||||||| ||||| ||||| |||||||||||||| |||| || ||| Sbjct: 566 ggcacacttccaaatggagatgcttcgaattcgaagagcaagcttacttcaacacacgat 625 Query: 632 gtgttaaagggcttggttgattggctctgttctcagctcaggaaccccacccacccgaac 691 || || | || |||||||||||||||||||| ||||| ||||| || || ||||||| | Sbjct: 626 gtattgagaggtttggttgattggctctgttcacagctgaggaatcctacacacccgagc 685 Query: 692 tgttctattcctactgctacccattgcctcgccactttgctgaaggagacatatgttaga 751 || |||||||||||| ||| |||||||||| |||||||||| | || |||||||||| Sbjct: 686 tgctctattcctacttctatccattgcctctccactttgctaagagaaccatatgttagg 745 Query: 752 accttgtttgttcaggcagatggtgtaaaactgctcattcctttaatatctccagcctca 811 || || |||||||| || ||||| | || ||||||||||| ||||| || ||||| || Sbjct: 746 acattatttgttcaagctgatggcatcaagctgctcattcccttaatttccccagcttcc 805 Query: 812 acacaacagtcaattcagctcctctacgaaacttgcctttgtatatggcttttatccttc 871 ||||||||||||||||||||||| || ||||||||||| || || |||||||||||||| Sbjct: 806 acacaacagtcaattcagctcctttatgaaacttgcctctgcatctggcttttatccttt 865 Query: 872 tatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagatgtt 931 |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 866 tatgatgctgcagttgattatttgtccaccacaagggttatgccaagacttgtagaggtt 925 Query: 932 gtcaaaggctctactaaagagaaggttgtcagagttgttgtgatgtccttccgcaatttg 991 ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 926 gtcaagggctctactaaagagaaggtggtcagagttgttgtgttgtccttccgcaatttg 985 Query: 992 ttggcaaagggtgcatttgctgcccaaatgattgatcttgggttgccgcatatagtacag 1051 ||||||||||||||||||||||||| ||||| |||||||| ||||| || || ||||| Sbjct: 986 ctggcaaagggtgcatttgctgcccagatgatcgatcttggattgccacaaatggtacaa 1045 Query: 1052 aatctgaaagctcaagcatggagtgatgaggatttgttagatgcactgaatcaactagaa 1111 || |||||||||||||||||| |||||||||| |||||||||| |||||||||||||| Sbjct: 1046 aacttgaaagctcaagcatggactgatgaggatctgttagatgctctgaatcaactagag 1105 Query: 1112 gtgggtctcaaagagaacctcaagaggttgagctcatttgataagtacaaacagcaagtg 1171 ||||| |||||||| |||||||||| |||||| || ||||||||||||||||||||||| Sbjct: 1106 gtgggactcaaagaaaacctcaagaagttgagttcctttgataagtacaaacagcaagtt 1165 Query: 1172 cttcttggccatcttgattggtctccaatgcacaaagacccaaatttctggcgagagaat 1231 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 1166 cttcttggtcatcttgactggtctccaatgcacaaagatccaagtttctggcgtgagaac 1225 Query: 1232 atcactaactttgaggaaaatgatttccagatcctacgtgtccttatgacagtcatcgac 1291 || | || ||||| || |||||||||||||| || || || || |||||| |||| ||| Sbjct: 1226 attaacaattttgaagagaatgatttccagattctgcgagttctcatgacaatcattgac 1285 Query: 1292 acatcaaccgacaccactgctcttgcagtcgcctgctatgacctctcacagttccttcag 1351 ||||||| |||||||| |||||||| || |||||||| ||||||||||||||||| ||| Sbjct: 1286 acatcaagtgacaccaccgctcttgccgtggcctgctacgacctctcacagttcctccag 1345 Query: 1352 taccacccttctggccgcctagtggtggcagacctcaaggcaaaggaccgagtcatgaaa 1411 ||||| || |||||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 1346 taccatccatctggccgaatcgtggtggcagacctcaaggccaaggaccgagtcatgaaa 1405 Query: 1412 ctcatgaaccacgacaacgccgaagtgaggaagaactccctgctctgcgtgcagaggctc 1471 |||||||| || || ||| | ||||||||||| || | || |||| |||||||||||| Sbjct: 1406 ctcatgaatcatgagaacactgaagtgaggaaaaatgcattgatctgtgtgcagaggctc 1465 Query: 1472 ttcctcggcgccaagtatgctagcttcctgcagg 1505 ||||| ||||| |||||||| || |||||||||| Sbjct: 1466 ttccttggcgcaaagtatgccagtttcctgcagg 1499
>gb|BT018553.1| Zea mays clone EL01N0439D12.d mRNA sequence Length = 1360 Score = 866 bits (437), Expect = 0.0 Identities = 920/1081 (85%) Strand = Plus / Plus Query: 425 gcagcactgttttacgacaaatctctctctggtgaagacatttacgatcctttcctaaga 484 |||||||||||||| || ||||| | || |||||||| ||||| || || ||| |||| Sbjct: 8 gcagcactgttttatgatcaatctttgtcgggtgaagatatttatgaaccgttcttaagg 67 Query: 485 ctgctcttgaaaggtaactggttcgtacaggaaaagagctgtaagatattgactcactta 544 || | | |||||| |||||||| ||||| ||||| || ||||||||||||||| || Sbjct: 68 ttgttatggaaaggcaactggtttgtacaagaaaaaagttgtaagatattgactgttata 127 Query: 545 ataagtgcgagacctaagcttcagaacggcatggttccaaatggagaggcttcaaattca 604 || ||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||| Sbjct: 128 attagtgcacgaccgaagcttcagaatggcacacttccaaatggagatgcttcgaattcg 187 Query: 605 aagagcaagcttacatcaattcatgatgtgttaaagggcttggttgattggctctgttct 664 |||||||||||||| |||| || ||||| || | || |||||||||||||||||||| Sbjct: 188 aagagcaagcttacttcaacacacgatgtattgagaggtttggttgattggctctgttca 247 Query: 665 cagctcaggaaccccacccacccgaactgttctattcctactgctacccattgcctcgcc 724 ||||| ||||| || || ||||||| ||| |||||||||||| ||| |||||||||| || Sbjct: 248 cagctgaggaatcctacacacccgagctgctctattcctacttctatccattgcctctcc 307 Query: 725 actttgctgaaggagacatatgttagaaccttgtttgttcaggcagatggtgtaaaactg 784 |||||||| | || |||||||||| || || |||||||| || ||||| | || ||| Sbjct: 308 actttgctaagagaaccatatgttaggacattatttgttcaagctgatggcatcaagctg 367 Query: 785 ctcattcctttaatatctccagcctcaacacaacagtcaattcagctcctctacgaaact 844 |||||||| || || || ||||| || ||||||||||||||||||||||| || |||||| Sbjct: 368 ctcattcccttcatttccccagcttccacacaacagtcaattcagctcctttatgaaact 427 Query: 845 tgcctttgtatatggcttttatccttctatgatgcagccgttgattatttgtccactaca 904 ||||| || || |||||||||||||| |||||||| || ||||||||||||||||| ||| Sbjct: 428 tgcctctgcatctggcttttatccttttatgatgctgcagttgattatttgtccaccaca 487 Query: 905 agggttatgccaagacttgtagatgttgtcaaaggctctactaaagagaaggttgtcaga 964 ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| Sbjct: 488 agggttatgccaagacttgtagaggttgtcaagggctctactaaagagaaggtggtcaga 547 Query: 965 gttgttgtgatgtccttccgcaatttgttggcaaagggtgcatttgctgcccaaatgatt 1024 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 548 gttgttgtgttgtccttccgcaatttgctggcaaagggtgcatttgctgcccagatgatc 607 Query: 1025 gatcttgggttgccgcatatagtacagaatctgaaagctcaagcatggagtgatgaggat 1084 |||||||| ||||| || || ||||| || |||||||||||||||||| |||||||||| Sbjct: 608 gatcttggattgccacaaatggtacaaaacttgaaagctcaagcatggactgatgaggat 667 Query: 1085 ttgttagatgcactgaatcaactagaagtgggtctcaaagagaacctcaagaggttgagc 1144 |||||||||| ||||| |||||||||||| |||||||| |||||||||| |||| | Sbjct: 668 ctgttagatgctctgaaatcactagaagtgggactcaaagaaaacctcaagaagttgcgt 727 Query: 1145 tcatttgataagtacaaacagcaagtgcttcttggccatcttgattggtctccaatgcac 1204 | ||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||| Sbjct: 728 ttctttgataagtacaaacagcaagttcttcttggtcatctggactggtctccaatgcac 787 Query: 1205 aaagacccaaatttctggcgagagaatatcactaactttgaggaaaatgatttccagatc 1264 ||||| |||| ||||||||| ||||| || | || ||||| ||||||||||||||||| Sbjct: 788 aaagatccaagtttctggcgtgagaacattaacaattttgaagaaaatgatttccagatt 847 Query: 1265 ctacgtgtccttatgacagtcatcgacacatcaaccgacaccactgctcttgcagtcgcc 1324 || | || || |||||| |||| |||||||||| |||||||| |||||||| || ||| Sbjct: 848 ctgagagttctcatgacaatcattgacacatcaagtgacaccaccgctcttgccgtggcc 907 Query: 1325 tgctatgacctctcacagttccttcagtaccacccttctggccgcctagtggtggcagac 1384 ||||| ||||||||||| |||||||||||||| || |||||||| | |||||||||||| Sbjct: 908 tgctacgacctctcacaattccttcagtaccatccatctggccgaatcgtggtggcagac 967 Query: 1385 ctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgccgaagtgaggaag 1444 |||||||| |||||||||||||||||||||||||| || || ||| | ||||||||||| Sbjct: 968 ctcaaggctaaggaccgagtcatgaaactcatgaatcatgagaacactgaagtgaggaaa 1027 Query: 1445 aactccctgctctgcgtgcagaggctcttcctcggcgccaagtatgctagcttcctgcag 1504 || | || |||| ||||||||||||||||| ||||| |||||||| || ||||||||| Sbjct: 1028 aatgcattgatctgtgtgcagaggctcttccttggcgcaaagtatgccagtttcctgcag 1087 Query: 1505 g 1505 | Sbjct: 1088 g 1088
>gb|BT019196.1| Zea mays clone Contig868.F mRNA sequence Length = 944 Score = 696 bits (351), Expect = 0.0 Identities = 588/667 (88%) Strand = Plus / Plus Query: 839 gaaacttgcctttgtatatggcttttatccttctatgatgcagccgttgattatttgtcc 898 ||||||||||| || || |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 9 gaaacttgcctctgcatctggcttttatccttttatgatgctgcagttgattatttgtcc 68 Query: 899 actacaagggttatgccaagacttgtagatgttgtcaaaggctctactaaagagaaggtt 958 || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 69 accacaagggttatgccaagacttgtagaggttgtcaagggctctactaaagagaaggtg 128 Query: 959 gtcagagttgttgtgatgtccttccgcaatttgttggcaaagggtgcatttgctgcccaa 1018 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 129 gtcagagttgttgtgttgtccttccgcaatttgctggcaaagggtgcatttgctgcccag 188 Query: 1019 atgattgatcttgggttgccgcatatagtacagaatctgaaagctcaagcatggagtgat 1078 ||||| |||||||| ||||| || || ||||| || |||||||||||||||||| |||| Sbjct: 189 atgatcgatcttggattgccacaaatggtacaaaacttgaaagctcaagcatggactgat 248 Query: 1079 gaggatttgttagatgcactgaatcaactagaagtgggtctcaaagagaacctcaagagg 1138 |||||| |||||||||| |||||||||||||||||||| |||||||| |||||||||| | Sbjct: 249 gaggatctgttagatgctctgaatcaactagaagtgggactcaaagaaaacctcaagaag 308 Query: 1139 ttgagctcatttgataagtacaaacagcaagtgcttcttggccatcttgattggtctcca 1198 ||||| || ||||||||||||||||||||||| |||||||| ||||| || ||||||||| Sbjct: 309 ttgagttcctttgataagtacaaacagcaagttcttcttggtcatctggactggtctcca 368 Query: 1199 atgcacaaagacccaaatttctggcgagagaatatcactaactttgaggaaaatgatttc 1258 ||||||||||| |||| ||||||||| ||||| || | || ||||| |||||||||||| Sbjct: 369 atgcacaaagatccaagtttctggcgtgagaacattaacaattttgaagaaaatgatttc 428 Query: 1259 cagatcctacgtgtccttatgacagtcatcgacacatcaaccgacaccactgctcttgca 1318 ||||| || | || || |||||| |||| |||||||||| |||||||| |||||||| Sbjct: 429 cagattctgagagttctcatgacaatcattgacacatcaagtgacaccaccgctcttgcc 488 Query: 1319 gtcgcctgctatgacctctcacagttccttcagtaccacccttctggccgcctagtggtg 1378 || |||||||| ||||||||||| |||||||||||||| || |||||||| | |||||| Sbjct: 489 gtggcctgctacgacctctcacaattccttcagtaccatccatctggccgaatcgtggtg 548 Query: 1379 gcagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgccgaagtg 1438 |||||||||||||| |||||||||||||||||||||||||| || || ||| | |||||| Sbjct: 549 gcagacctcaaggctaaggaccgagtcatgaaactcatgaatcatgagaacactgaagtg 608 Query: 1439 aggaagaactccctgctctgcgtgcagaggctcttcctcggcgccaagtatgctagcttc 1498 ||||| || | || |||| ||||||||||||||||| ||||| |||||||| || ||| Sbjct: 609 aggaaaaatgcattgatctgtgtgcagaggctcttccttggcgcaaagtatgccagtttc 668 Query: 1499 ctgcagg 1505 ||||||| Sbjct: 669 ctgcagg 675
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 297 bits (150), Expect = 7e-77 Identities = 222/246 (90%) Strand = Plus / Plus Query: 1259 cagatcctacgtgtccttatgacagtcatcgacacatcaaccgacaccactgctcttgca 1318 ||||| |||||||| ||||||||| ||||||||||||| ||||||| ||||||||||| Sbjct: 21768201 cagattctacgtgtgcttatgacaatcatcgacacatcggccgacacgactgctcttgct 21768260 Query: 1319 gtcgcctgctatgacctctcacagttccttcagtaccacccttctggccgcctagtggtg 1378 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 21768261 gtcgcctgctatgacctctcacagttccttcagtaccacccttctgggcgcattgtggtg 21768320 Query: 1379 gcagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgccgaagtg 1438 ||||| || ||||| ||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 21768321 gcagatctgaaggcgaaggaccgagtgatgaagctcatgaaccacgagaacgccgaagtg 21768380 Query: 1439 aggaagaactccctgctctgcgtgcagaggctcttcctcggcgccaagtatgctagcttc 1498 |||||||| |||||||||||||||||||||| ||||| || || ||||| || |||||| Sbjct: 21768381 aggaagaatgccctgctctgcgtgcagaggcttttccttggtgcgaagtacgcgagcttc 21768440 Query: 1499 ctgcag 1504 |||||| Sbjct: 21768441 ctgcag 21768446 Score = 186 bits (94), Expect = 2e-43 Identities = 160/182 (87%) Strand = Plus / Plus Query: 1080 aggatttgttagatgcactgaatcaactagaagtgggtctcaaagagaacctcaagaggt 1139 ||||||| |||||||| |||||||| |||||| | || |||||||| ||||| |||| || Sbjct: 21767517 aggatttattagatgcgctgaatcagctagaaataggactcaaagacaaccttaagaagt 21767576 Query: 1140 tgagctcatttgataagtacaaacagcaagtgcttcttggccatcttgattggtctccaa 1199 |||| |||||||| |||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 21767577 tgagttcatttgagaagtacaagcaacaagttcttcttggccatcttgactggtctccaa 21767636 Query: 1200 tgcacaaagacccaaatttctggcgagagaatatcactaactttgaggaaaatgatttcc 1259 ||||||||||||||| ||||||||| ||||| || | ||| ||||| ||||||||||||| Sbjct: 21767637 tgcacaaagacccaagtttctggcgcgagaacattaataattttgaagaaaatgatttcc 21767696 Query: 1260 ag 1261 || Sbjct: 21767697 ag 21767698 Score = 180 bits (91), Expect = 1e-41 Identities = 121/131 (92%) Strand = Plus / Plus Query: 827 cagctcctctacgaaacttgcctttgtatatggcttttatccttctatgatgcagccgtt 886 ||||| ||||||||||||||||| || || |||||||||||||| ||||||||||||||| Sbjct: 21766613 cagcttctctacgaaacttgcctctgcatctggcttttatccttttatgatgcagccgtt 21766672 Query: 887 gattatttgtccactacaagggttatgccaagacttgtagatgttgtcaaaggctctact 946 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 21766673 gattatttgtccactacaagggttatgccaagacttgtagaggttgtgaaaggttcaaca 21766732 Query: 947 aaagagaaggt 957 ||||||||||| Sbjct: 21766733 aaagagaaggt 21766743 Score = 139 bits (70), Expect = 4e-29 Identities = 136/158 (86%) Strand = Plus / Plus Query: 665 cagctcaggaaccccacccacccgaactgttctattcctactgctacccattgcctcgcc 724 ||||| ||||| || |||||||| ||||||||| |||||||||||| ||||| || ||| Sbjct: 21766163 cagctgaggaatcctacccacccaaactgttctgttcctactgctatgcattgtcttgcc 21766222 Query: 725 actttgctgaaggagacatatgttagaaccttgtttgttcaggcagatggtgtaaaactg 784 |||||||| | ||| ||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 21766223 actttgctaagagagcagtatgttagagctttatttgttcaggcggatggtgtaaaactg 21766282 Query: 785 ctcattcctttaatatctccagcctcaacacaacagtc 822 |||||||||||||| |||||||| || ||||||||||| Sbjct: 21766283 ctcattcctttaatttctccagcttccacacaacagtc 21766320 Score = 131 bits (66), Expect = 1e-26 Identities = 93/102 (91%) Strand = Plus / Plus Query: 566 cagaacggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaatt 625 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 21765963 cagaatggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctact 21766022 Query: 626 catgatgtgttaaagggcttggttgattggctctgttctcag 667 || |||||||||| || |||||||||||||||||||||||| Sbjct: 21766023 caagatgtgttaagaggtttggttgattggctctgttctcag 21766064 Score = 121 bits (61), Expect = 9e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 954 aggttgtcagagttgttgtgatgtccttccgcaatttgttggcaaagggtgcatttgctg 1013 |||||||||| || ||| | ||||| |||| || ||| | ||||||||||| ||||||| Sbjct: 21766829 aggttgtcagggtcgttatcatgtctatccgtaacttgcttgcaaagggtgcgtttgctg 21766888 Query: 1014 cccaaatgattgatcttgggttgccgcatatagtacagaatctgaaagctcaagcatgga 1073 ||||||||||||||||||| |||| || |||||||||||| |||||||||||||||||| Sbjct: 21766889 cccaaatgattgatcttggactgccacacatagtacagaatttgaaagctcaagcatgga 21766948 Query: 1074 gtgatgagg 1082 |||||||| Sbjct: 21766949 ctgatgagg 21766957 Score = 97.6 bits (49), Expect = 1e-16 Identities = 109/129 (84%) Strand = Plus / Plus Query: 180 aggttctcaagcgggacattccatgggagacatatatgtcaactaaactgatcacttcga 239 ||||||||||| |||| ||||||||||| |||| ||| ||| ||| ||||| | || Sbjct: 21764637 aggttctcaagagggatattccatgggaatcatacatggcaaataagctgatttccggga 21764696 Query: 240 catgccttcagcttttaaggcgttatgaccacaaaccagaaagtcagagaggtccgttgc 299 |||||||||||||||| | ||||||||||||||||||||||| || ||||||| |||| Sbjct: 21764697 catgccttcagcttttgcgacgttatgaccacaaaccagaaagccaacgaggtcctttgc 21764756 Query: 300 ttgatgagg 308 ||||||||| Sbjct: 21764757 ttgatgagg 21764765 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 413 aatcctaaacgagcagcactgttttacgacaaatctctctctggtgaagacatttacgat 472 ||||||||||||||||||||||| || || || |||||||||||||||||||| ||||| Sbjct: 21765148 aatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatctacgac 21765207 Query: 473 cctttcctaag 483 ||||||||||| Sbjct: 21765208 cctttcctaag 21765218 Score = 91.7 bits (46), Expect = 8e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 337 gaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccctcattga 396 |||||||||||| | |||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 21764989 gaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccctgattga 21765048 Query: 397 tgagatgcttgcag 410 |||||||||||||| Sbjct: 21765049 tgagatgcttgcag 21765062 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 486 tgctcttgaaaggtaactggttcgtacaggaaaagagctgtaagatattgac 537 |||||||||||||||||||||| || || ||||| || |||||||||||||| Sbjct: 21765815 tgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaagatattgac 21765866 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/43 (90%), Gaps = 2/43 (4%) Strand = Plus / Plus Query: 1662 tgtataataaataatctcagctatggcttgctcgatgtaataa 1704 |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 21768610 tgtataataaataatc--agctattccttgctcgatgtaataa 21768650
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 297 bits (150), Expect = 7e-77 Identities = 222/246 (90%) Strand = Plus / Plus Query: 1259 cagatcctacgtgtccttatgacagtcatcgacacatcaaccgacaccactgctcttgca 1318 ||||| |||||||| ||||||||| ||||||||||||| ||||||| ||||||||||| Sbjct: 85384 cagattctacgtgtgcttatgacaatcatcgacacatcggccgacacgactgctcttgct 85443 Query: 1319 gtcgcctgctatgacctctcacagttccttcagtaccacccttctggccgcctagtggtg 1378 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 85444 gtcgcctgctatgacctctcacagttccttcagtaccacccttctgggcgcattgtggtg 85503 Query: 1379 gcagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgccgaagtg 1438 ||||| || ||||| ||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 85504 gcagatctgaaggcgaaggaccgagtgatgaagctcatgaaccacgagaacgccgaagtg 85563 Query: 1439 aggaagaactccctgctctgcgtgcagaggctcttcctcggcgccaagtatgctagcttc 1498 |||||||| |||||||||||||||||||||| ||||| || || ||||| || |||||| Sbjct: 85564 aggaagaatgccctgctctgcgtgcagaggcttttccttggtgcgaagtacgcgagcttc 85623 Query: 1499 ctgcag 1504 |||||| Sbjct: 85624 ctgcag 85629 Score = 186 bits (94), Expect = 2e-43 Identities = 160/182 (87%) Strand = Plus / Plus Query: 1080 aggatttgttagatgcactgaatcaactagaagtgggtctcaaagagaacctcaagaggt 1139 ||||||| |||||||| |||||||| |||||| | || |||||||| ||||| |||| || Sbjct: 84700 aggatttattagatgcgctgaatcagctagaaataggactcaaagacaaccttaagaagt 84759 Query: 1140 tgagctcatttgataagtacaaacagcaagtgcttcttggccatcttgattggtctccaa 1199 |||| |||||||| |||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 84760 tgagttcatttgagaagtacaagcaacaagttcttcttggccatcttgactggtctccaa 84819 Query: 1200 tgcacaaagacccaaatttctggcgagagaatatcactaactttgaggaaaatgatttcc 1259 ||||||||||||||| ||||||||| ||||| || | ||| ||||| ||||||||||||| Sbjct: 84820 tgcacaaagacccaagtttctggcgcgagaacattaataattttgaagaaaatgatttcc 84879 Query: 1260 ag 1261 || Sbjct: 84880 ag 84881 Score = 180 bits (91), Expect = 1e-41 Identities = 121/131 (92%) Strand = Plus / Plus Query: 827 cagctcctctacgaaacttgcctttgtatatggcttttatccttctatgatgcagccgtt 886 ||||| ||||||||||||||||| || || |||||||||||||| ||||||||||||||| Sbjct: 83796 cagcttctctacgaaacttgcctctgcatctggcttttatccttttatgatgcagccgtt 83855 Query: 887 gattatttgtccactacaagggttatgccaagacttgtagatgttgtcaaaggctctact 946 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 83856 gattatttgtccactacaagggttatgccaagacttgtagaggttgtgaaaggttcaaca 83915 Query: 947 aaagagaaggt 957 ||||||||||| Sbjct: 83916 aaagagaaggt 83926 Score = 139 bits (70), Expect = 4e-29 Identities = 136/158 (86%) Strand = Plus / Plus Query: 665 cagctcaggaaccccacccacccgaactgttctattcctactgctacccattgcctcgcc 724 ||||| ||||| || |||||||| ||||||||| |||||||||||| ||||| || ||| Sbjct: 83346 cagctgaggaatcctacccacccaaactgttctgttcctactgctatgcattgtcttgcc 83405 Query: 725 actttgctgaaggagacatatgttagaaccttgtttgttcaggcagatggtgtaaaactg 784 |||||||| | ||| ||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 83406 actttgctaagagagcagtatgttagagctttatttgttcaggcggatggtgtaaaactg 83465 Query: 785 ctcattcctttaatatctccagcctcaacacaacagtc 822 |||||||||||||| |||||||| || ||||||||||| Sbjct: 83466 ctcattcctttaatttctccagcttccacacaacagtc 83503 Score = 131 bits (66), Expect = 1e-26 Identities = 93/102 (91%) Strand = Plus / Plus Query: 566 cagaacggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaatt 625 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 83146 cagaatggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctact 83205 Query: 626 catgatgtgttaaagggcttggttgattggctctgttctcag 667 || |||||||||| || |||||||||||||||||||||||| Sbjct: 83206 caagatgtgttaagaggtttggttgattggctctgttctcag 83247 Score = 121 bits (61), Expect = 9e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 954 aggttgtcagagttgttgtgatgtccttccgcaatttgttggcaaagggtgcatttgctg 1013 |||||||||| || ||| | ||||| |||| || ||| | ||||||||||| ||||||| Sbjct: 84012 aggttgtcagggtcgttatcatgtctatccgtaacttgcttgcaaagggtgcgtttgctg 84071 Query: 1014 cccaaatgattgatcttgggttgccgcatatagtacagaatctgaaagctcaagcatgga 1073 ||||||||||||||||||| |||| || |||||||||||| |||||||||||||||||| Sbjct: 84072 cccaaatgattgatcttggactgccacacatagtacagaatttgaaagctcaagcatgga 84131 Query: 1074 gtgatgagg 1082 |||||||| Sbjct: 84132 ctgatgagg 84140 Score = 97.6 bits (49), Expect = 1e-16 Identities = 109/129 (84%) Strand = Plus / Plus Query: 180 aggttctcaagcgggacattccatgggagacatatatgtcaactaaactgatcacttcga 239 ||||||||||| |||| ||||||||||| |||| ||| ||| ||| ||||| | || Sbjct: 81820 aggttctcaagagggatattccatgggaatcatacatggcaaataagctgatttccggga 81879 Query: 240 catgccttcagcttttaaggcgttatgaccacaaaccagaaagtcagagaggtccgttgc 299 |||||||||||||||| | ||||||||||||||||||||||| || ||||||| |||| Sbjct: 81880 catgccttcagcttttgcgacgttatgaccacaaaccagaaagccaacgaggtcctttgc 81939 Query: 300 ttgatgagg 308 ||||||||| Sbjct: 81940 ttgatgagg 81948 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 413 aatcctaaacgagcagcactgttttacgacaaatctctctctggtgaagacatttacgat 472 ||||||||||||||||||||||| || || || |||||||||||||||||||| ||||| Sbjct: 82331 aatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatctacgac 82390 Query: 473 cctttcctaag 483 ||||||||||| Sbjct: 82391 cctttcctaag 82401 Score = 91.7 bits (46), Expect = 8e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 337 gaatatcttgcgaagcatctctaaggaagagaccgtggaatatgtgcttgccctcattga 396 |||||||||||| | |||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 82172 gaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccctgattga 82231 Query: 397 tgagatgcttgcag 410 |||||||||||||| Sbjct: 82232 tgagatgcttgcag 82245 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 486 tgctcttgaaaggtaactggttcgtacaggaaaagagctgtaagatattgac 537 |||||||||||||||||||||| || || ||||| || |||||||||||||| Sbjct: 82998 tgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaagatattgac 83049 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/43 (90%), Gaps = 2/43 (4%) Strand = Plus / Plus Query: 1662 tgtataataaataatctcagctatggcttgctcgatgtaataa 1704 |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 85793 tgtataataaataatc--agctattccttgctcgatgtaataa 85833
>emb|AJ438592.1|MCR438592 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase subunit H (vha-H gene) Length = 1735 Score = 93.7 bits (47), Expect = 2e-15 Identities = 137/167 (82%) Strand = Plus / Plus Query: 1098 tgaatcaactagaagtgggtctcaaagagaacctcaagaggttgagctcatttgataagt 1157 ||||||||||||||| || | || || ||| |||||| | |||| |||||||| || | Sbjct: 1120 tgaatcaactagaagaagggatgaaggaaaacatcaagaagctgagttcatttgacaaat 1179 Query: 1158 acaaacagcaagtgcttcttggccatcttgattggtctccaatgcacaaagacccaaatt 1217 | |||||| |||| ||||||||||||||||||||||| ||| |||||||||| | | Sbjct: 1180 ataaacaggaagttcttcttggccatcttgattggtccccagtgcacaaagatactttct 1239 Query: 1218 tctggcgagagaatatcactaactttgaggaaaatgatttccagatc 1264 ||||||| || || || || |||||||||||||||||||| |||||| Sbjct: 1240 tctggcgtgataacattaccaactttgaggaaaatgattttcagatc 1286 Score = 60.0 bits (30), Expect = 3e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 467 tacgatcctttcctaagactgctcttgaaaggtaactggttcgtacaggaaaagagctgt 526 ||||| ||||| ||||| |||||| |||||| ||||||||| |||| || ||||||||| Sbjct: 447 tacgaaccttttataagattgctctggaaaggcaactggttcatacaagagaagagctgt 506 Query: 527 aagata 532 |||||| Sbjct: 507 aagata 512 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 171 ccacggagcaggttctcaagcgggacattccatgggagacatatatg 217 |||| ||||||||| | || |||||||||||||||||||||||||| Sbjct: 151 ccactgagcaggttatgaaaagggacattccatgggagacatatatg 197
>ref|NM_114072.2| Arabidopsis thaliana ATP binding / hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism (AT3G42050) mRNA, complete cds Length = 1884 Score = 87.7 bits (44), Expect = 1e-13 Identities = 161/200 (80%) Strand = Plus / Plus Query: 1064 caagcatggagtgatgaggatttgttagatgcactgaatcaactagaagtgggtctcaaa 1123 |||||||||||||| ||||| ||| | ||||||||||| |||||||||| || || ||| Sbjct: 1088 caagcatggagtgacgaggacttgctggatgcactgaaccaactagaagaagggctaaaa 1147 Query: 1124 gagaacctcaagaggttgagctcatttgataagtacaaacagcaagtgcttcttggccat 1183 || || |||||| ||||| || |||||||| || || || | ||||| ||||||||| Sbjct: 1148 gacaagatcaagaaattgagttcctttgataaatataagcaagaggtgctccttggccat 1207 Query: 1184 cttgattggtctccaatgcacaaagacccaaatttctggcgagagaatatcactaacttt 1243 ||||| ||| ||||||||||| || | ||||||||||| |||||| |||| |||| Sbjct: 1208 cttgactggaacccaatgcacaaggagaccaatttctggcgtgagaatgtcacatgcttt 1267 Query: 1244 gaggaaaatgatttccagat 1263 ||||| || || |||||||| Sbjct: 1268 gaggagaacgacttccagat 1287 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1379 gcagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgc 1431 ||||||||||||||||| || ||||| ||||| || || |||||||| ||||| Sbjct: 1403 gcagacctcaaggcaaaagagcgagtgatgaagctgataaaccacgagaacgc 1455
>gb|AY091685.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, complete cds Length = 1326 Score = 87.7 bits (44), Expect = 1e-13 Identities = 161/200 (80%) Strand = Plus / Plus Query: 1064 caagcatggagtgatgaggatttgttagatgcactgaatcaactagaagtgggtctcaaa 1123 |||||||||||||| ||||| ||| | ||||||||||| |||||||||| || || ||| Sbjct: 880 caagcatggagtgacgaggacttgctggatgcactgaaccaactagaagaagggctaaaa 939 Query: 1124 gagaacctcaagaggttgagctcatttgataagtacaaacagcaagtgcttcttggccat 1183 || || |||||| ||||| || |||||||| || || || | ||||| ||||||||| Sbjct: 940 gacaagatcaagaaattgagttcctttgataaatataagcaagaggtgctccttggccat 999 Query: 1184 cttgattggtctccaatgcacaaagacccaaatttctggcgagagaatatcactaacttt 1243 ||||| ||| ||||||||||| || | ||||||||||| |||||| |||| |||| Sbjct: 1000 cttgactggaacccaatgcacaaggagaccaatttctggcgtgagaatgtcacatgcttt 1059 Query: 1244 gaggaaaatgatttccagat 1263 ||||| || || |||||||| Sbjct: 1060 gaggagaacgacttccagat 1079 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1379 gcagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgc 1431 ||||||||||||||||| || ||||| ||||| || || |||||||| ||||| Sbjct: 1195 gcagacctcaaggcaaaagagcgagtgatgaagctgataaaccacgagaacgc 1247
>gb|AY037176.1| Arabidopsis thaliana AT3g42050/F4M19_10 mRNA, complete cds Length = 1704 Score = 87.7 bits (44), Expect = 1e-13 Identities = 161/200 (80%) Strand = Plus / Plus Query: 1064 caagcatggagtgatgaggatttgttagatgcactgaatcaactagaagtgggtctcaaa 1123 |||||||||||||| ||||| ||| | ||||||||||| |||||||||| || || ||| Sbjct: 1064 caagcatggagtgacgaggacttgctggatgcactgaaccaactagaagaagggctaaaa 1123 Query: 1124 gagaacctcaagaggttgagctcatttgataagtacaaacagcaagtgcttcttggccat 1183 || || |||||| ||||| || |||||||| || || || | ||||| ||||||||| Sbjct: 1124 gacaagatcaagaaattgagttcctttgataaatataagcaagaggtgctccttggccat 1183 Query: 1184 cttgattggtctccaatgcacaaagacccaaatttctggcgagagaatatcactaacttt 1243 ||||| ||| ||||||||||| || | ||||||||||| |||||| |||| |||| Sbjct: 1184 cttgactggaacccaatgcacaaggagaccaatttctggcgtgagaatgtcacatgcttt 1243 Query: 1244 gaggaaaatgatttccagat 1263 ||||| || || |||||||| Sbjct: 1244 gaggagaacgacttccagat 1263 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1379 gcagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgc 1431 ||||||||||||||||| || ||||| ||||| || || |||||||| ||||| Sbjct: 1379 gcagacctcaaggcaaaagagcgagtgatgaagctgataaaccacgagaacgc 1431
>emb|BX823850.1|CNS0A6JD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS83ZB01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 754 Score = 87.7 bits (44), Expect = 1e-13 Identities = 161/200 (80%) Strand = Plus / Plus Query: 1064 caagcatggagtgatgaggatttgttagatgcactgaatcaactagaagtgggtctcaaa 1123 |||||||||||||| ||||| ||| | ||||||||||| |||||||||| || || ||| Sbjct: 68 caagcatggagtgacgaggacttgctggatgcactgaaccaactagaagaagggctaaaa 127 Query: 1124 gagaacctcaagaggttgagctcatttgataagtacaaacagcaagtgcttcttggccat 1183 || || |||||| ||||| || |||||||| || || || | ||||| ||||||||| Sbjct: 128 gacaagatcaagaaattgagttcctttgataaatataagcaagaggtgctccttggccat 187 Query: 1184 cttgattggtctccaatgcacaaagacccaaatttctggcgagagaatatcactaacttt 1243 ||||| ||| ||||||||||| || | ||||||||||| |||||| |||| |||| Sbjct: 188 cttgactggaacccaatgcacaaggagaccaatttctggcgtgagaatgtcacatgcttt 247 Query: 1244 gaggaaaatgatttccagat 1263 ||||| || || |||||||| Sbjct: 248 gaggagaacgacttccagat 267 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1379 gcagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgc 1431 ||||||||||||||||| || ||||| ||||| || || |||||||| ||||| Sbjct: 383 gcagacctcaaggcaaaagagcgagtgatgaagctgataaaccacgagaacgc 435
>gb|DQ493959.1| Musa acuminata vacuolar ATPase subunit H mRNA, partial cds Length = 317 Score = 83.8 bits (42), Expect = 2e-12 Identities = 174/218 (79%) Strand = Plus / Plus Query: 1058 aaagctcaagcatggagtgatgaggatttgttagatgcactgaatcaactagaagtgggt 1117 |||||||| || ||||||||||||||||| || || ||| ||||||| ||||||| || Sbjct: 23 aaagctcaggcctggagtgatgaggatttattggaagcattgaatcagctagaagatgga 82 Query: 1118 ctcaaagagaacctcaagaggttgagctcatttgataagtacaaacagcaagtgcttctt 1177 || || || || | || | || || || |||||||| || || ||| |||| |||||| Sbjct: 83 ctgaaggaacacattaaaactttaagttcctttgataaatataagcaggaagtccttctt 142 Query: 1178 ggccatcttgattggtctccaatgcacaaagacccaaatttctggcgagagaatatcact 1237 || |||||||| |||| ||| |||||||| || ||| |||||||| || ||||| || Sbjct: 143 ggtcatcttgactggtatcctatgcacaaggatccaggattctggcgtgaaaatattaca 202 Query: 1238 aactttgaggaaaatgatttccagatcctacgtgtcct 1275 || ||||| ||||| |||||||||||||| |||||||| Sbjct: 203 aattttgaagaaaacgatttccagatcctgcgtgtcct 240
>emb|AJ698924.1| Populus deltoides x Populus maximowiczii partial mRNA for putative vacuolar ATPase subunit H Length = 392 Score = 83.8 bits (42), Expect = 2e-12 Identities = 75/86 (87%) Strand = Plus / Plus Query: 1178 ggccatcttgattggtctccaatgcacaaagacccaaatttctggcgagagaatatcact 1237 |||||||||||||||||||| ||||||||||| || ||||||||| || ||||| ||| Sbjct: 21 ggccatcttgattggtctcctatgcacaaagatcctgctttctggcgtgaaaatataact 80 Query: 1238 aactttgaggaaaatgatttccagat 1263 || ||||| || |||||||||||||| Sbjct: 81 aattttgaagagaatgatttccagat 106
>emb|BX823221.1|CNS0A6OK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1696 Score = 79.8 bits (40), Expect = 3e-11 Identities = 160/200 (80%) Strand = Plus / Plus Query: 1064 caagcatggagtgatgaggatttgttagatgcactgaatcaactagaagtgggtctcaaa 1123 |||||||||||||| ||||| ||| | ||||||||||| |||||||||| || || ||| Sbjct: 1014 caagcatggagtgacgaggacttgctggatgcactgaaccaactagaagaagggctaaaa 1073 Query: 1124 gagaacctcaagaggttgagctcatttgataagtacaaacagcaagtgcttcttggccat 1183 || || |||||| ||||| || |||||||| || || || | ||||| ||||||||| Sbjct: 1074 gacaagatcaagaaattgagttcctttgataaatataagcaagaggtgctccttggccat 1133 Query: 1184 cttgattggtctccaatgcacaaagacccaaatttctggcgagagaatatcactaacttt 1243 ||||| ||| ||||||||||| || | ||| ||||||| |||||| |||| |||| Sbjct: 1134 cttgactggaacccaatgcacaaggagaccaatctctggcgtgagaatgtcacatgcttt 1193 Query: 1244 gaggaaaatgatttccagat 1263 ||||| || || |||||||| Sbjct: 1194 gaggagaacgacttccagat 1213 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1379 gcagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgc 1431 ||||||||||||||||| || ||||| ||||| || || |||||||| ||||| Sbjct: 1329 gcagacctcaaggcaaaagagcgagtgatgaagctgataaaccacgagaacgc 1381
>gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete sequence Length = 119208 Score = 77.8 bits (39), Expect = 1e-10 Identities = 98/115 (85%), Gaps = 2/115 (1%) Strand = Plus / Plus Query: 1148 tttgataagtacaaacagcaagtgcttcttggccatcttgattggtctccaatgcacaaa 1207 |||||||||||||| || |||| ||||||||| |||| ||||||||||| ||||||||| Sbjct: 66152 tttgataagtacaagcaagaagttcttcttggcaatctggattggtctcccatgcacaaa 66211 Query: 1208 ga-cccaaatttctggcgagagaatatcactaactttgaggaaaatgatttccag 1261 || |||| |||| |||||||| ||||| || || ||||| || ||||||||||| Sbjct: 66212 gatcccatattt-tggcgagaaaatataaccaattttgaagagcatgatttccag 66265 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1056 tgaaagctcaagcatggagtgatgagg 1082 ||||||| ||||||||||||||||||| Sbjct: 65211 tgaaagcacaagcatggagtgatgagg 65237
>gb|AY225129.1| Suaeda maritima subsp. salsa putative vacuolar ATPase subunit H protein mRNA, complete cds Length = 1969 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 161 gccgagctcaccacggagcaggttctcaagcgggacattccatgggagacatatatgtca 220 ||||| |||||||| || ||||||||||| |||||||||||||||||||||| ||| || Sbjct: 116 gccgaactcaccactgatcaggttctcaaaagggacattccatgggagacatacatgaca 175 Query: 221 actaaactgatcact 235 ||||| |||||||| Sbjct: 176 actaagttgatcact 190 Score = 65.9 bits (33), Expect = 5e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1220 tggcgagagaatatcactaactttgaggaaaatgatttccagatc 1264 ||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 1208 tggcgggagaatatcaagaactttgaggaaaatgatttccagatc 1252
>gb|AC189325.1| Brassica rapa subsp. pekinensis clone KBrB036M17, complete sequence Length = 151101 Score = 67.9 bits (34), Expect = 1e-07 Identities = 76/90 (84%) Strand = Plus / Plus Query: 1172 cttcttggccatcttgattggtctccaatgcacaaagacccaaatttctggcgagagaat 1231 ||||||||||||||||| ||| |||||||||||||| | ||||||||||| |||||| Sbjct: 76915 cttcttggccatcttgactggaacccaatgcacaaagaggccaatttctggcgtgagaat 76974 Query: 1232 atcactaactttgaggaaaatgatttccag 1261 |||| | ||| ||||| ||||| |||||| Sbjct: 76975 gtcacaagcttcgaggagaatgacttccag 77004 Score = 48.1 bits (24), Expect = 0.11 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1380 cagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgc 1431 ||||||||||||| || || ||||| |||||||| |||||||| || ||||| Sbjct: 77227 cagacctcaaggcgaaagaacgagtgatgaaactgatgaaccatgagaacgc 77278 Score = 46.1 bits (23), Expect = 0.44 Identities = 71/87 (81%) Strand = Plus / Plus Query: 996 caaagggtgcatttgctgcccaaatgattgatcttgggttgccgcatatagtacagaatc 1055 |||| ||| |||||| |||||||||| |||||||||| | || ||||| | || | || Sbjct: 76566 caaaaggtacatttggtgcccaaatggttgatcttggactcccacatatcatccacagtc 76625 Query: 1056 tgaaagctcaagcatggagtgatgagg 1082 ||||| | |||||||||||||| |||| Sbjct: 76626 tgaaaacacaagcatggagtgacgagg 76652 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 192 gggacattccatgggagacatatatgtcaactaa 225 ||||||||||||||||||| || ||| ||||||| Sbjct: 74325 gggacattccatgggagacttacatgacaactaa 74358
>emb|AL356013.1|ATF4M19 Arabidopsis thaliana DNA chromosome 3, BAC clone F4M19 Length = 94342 Score = 61.9 bits (31), Expect = 7e-06 Identities = 136/171 (79%) Strand = Plus / Minus Query: 1091 gatgcactgaatcaactagaagtgggtctcaaagagaacctcaagaggttgagctcattt 1150 ||||||||||| |||||||||| || || ||||| || |||||| ||||| || ||| Sbjct: 19435 gatgcactgaaccaactagaagaagggctaaaagacaagatcaagaaattgagttccttt 19376 Query: 1151 gataagtacaaacagcaagtgcttcttggccatcttgattggtctccaatgcacaaagac 1210 ||||| || || || | ||||| |||||||||||||| ||| ||||||||||| || Sbjct: 19375 gataaatataagcaagaggtgctccttggccatcttgactggaacccaatgcacaaggag 19316 Query: 1211 ccaaatttctggcgagagaatatcactaactttgaggaaaatgatttccag 1261 | ||||||||||| |||||| |||| ||||||||| || || |||||| Sbjct: 19315 accaatttctggcgtgagaatgtcacatgctttgaggagaacgacttccag 19265 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Minus Query: 1379 gcagacctcaaggcaaaggaccgagtcatgaaactcatgaaccacgacaacgc 1431 ||||||||||||||||| || ||||| ||||| || || |||||||| ||||| Sbjct: 19025 gcagacctcaaggcaaaagagcgagtgatgaagctgataaaccacgagaacgc 18973
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 48.1 bits (24), Expect = 0.11 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 54 cgaatcgcctgccctcgccggctgatccgcgcgggc 89 ||||||||||| || ||||||||||||||||||||| Sbjct: 5347331 cgaatcgcctggcc-cgccggctgatccgcgcgggc 5347297
>gb|AF301237.4| Homo sapiens chromosome 8 clone CTD-2547A9 map q13.3, complete sequence Length = 169842 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Minus Query: 921 ttgtagatgttgtcaaaggctct 943 ||||||||||||||||||||||| Sbjct: 22922 ttgtagatgttgtcaaaggctct 22900
>gb|AC105082.6| Homo sapiens chromosome 8, clone CTD-2547A9, complete sequence Length = 169845 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Minus Query: 921 ttgtagatgttgtcaaaggctct 943 ||||||||||||||||||||||| Sbjct: 22923 ttgtagatgttgtcaaaggctct 22901
>gb|AC100798.4| Homo sapiens chromosome 8, clone RP11-600K15, complete sequence Length = 167799 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 921 ttgtagatgttgtcaaaggctct 943 ||||||||||||||||||||||| Sbjct: 11841 ttgtagatgttgtcaaaggctct 11863
>emb|AL359986.15| Human DNA sequence from clone RP11-106M14 on chromosome 10 Contains the PPP1R3C gene for protein phosphatase 1 regulatory (inhibitor) subunit 3C, a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene and a CpG island, complete sequence Length = 173119 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 848 ctttgtatatggcttttatcct 869 |||||||||||||||||||||| Sbjct: 145860 ctttgtatatggcttttatcct 145881
>gb|AY544986.1| Litopenaeus vannamei Kazal-type proteinase inhibitor mRNA, complete cds Length = 1279 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1377 tggcagacctcaaggcaaagga 1398 |||||||||||||||||||||| Sbjct: 13 tggcagacctcaaggcaaagga 34
>gb|U46779.1|CPU46779 Cavia porcellus granulocyte-macrophage stimulation factor mRNA, partial cds Length = 420 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1119 tcaaagagaacctcaagaggtt 1140 |||||||||||||||||||||| Sbjct: 371 tcaaagagaacctcaagaggtt 392
>emb|CR450803.11| Zebrafish DNA sequence from clone DKEY-11O18 in linkage group 21, complete sequence Length = 150034 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 663 ctcagctcaggaaccccaccc 683 ||||||||||||||||||||| Sbjct: 47775 ctcagctcaggaaccccaccc 47755
>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence Length = 200560 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 589 agaggcttcaaattcaaagagcaag 613 |||||||| |||||||||||||||| Sbjct: 89313 agaggctttaaattcaaagagcaag 89337
>gb|BC084672.1| Xenopus laevis MGC82842 protein, mRNA (cDNA clone MGC:98234 IMAGE:4884385), complete cds Length = 2879 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1601 agacctctgcaatttcttgtc 1621 ||||||||||||||||||||| Sbjct: 753 agacctctgcaatttcttgtc 733
>gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome 2, complete sequence Length = 165496 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 544 aataagtgcgagacctaagcttcag 568 |||||||| |||||||||||||||| Sbjct: 58995 aataagtgtgagacctaagcttcag 58971
>gb|AC003985.2| Homo sapiens PAC clone RP5-978I12 from 7, complete sequence Length = 104492 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 723 ccactttgctgaaggagacat 743 ||||||||||||||||||||| Sbjct: 75156 ccactttgctgaaggagacat 75176
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgcgatggatcgcgccgagct 168 ||||||||||||||||||||| Sbjct: 4087522 cgcgatggatcgcgccgagct 4087542
>emb|BX936442.10| Zebrafish DNA sequence from clone DKEY-101D4 in linkage group 21, complete sequence Length = 229721 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1779 aaattgtatacattattttct 1799 ||||||||||||||||||||| Sbjct: 211872 aaattgtatacattattttct 211852
>gb|AC110612.3| Homo sapiens BAC clone RP11-416B16 from 4, complete sequence Length = 158472 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1777 gtaaattgtatacattatttt 1797 ||||||||||||||||||||| Sbjct: 41693 gtaaattgtatacattatttt 41713
>emb|AL390058.13| Human DNA sequence from clone RP11-345E19 on chromosome X, complete sequence Length = 147798 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 263 tatgaccacaaaccagaaagtcaga 287 |||||||||||| |||||||||||| Sbjct: 99625 tatgaccacaaatcagaaagtcaga 99649
>emb|X95549.1|XLFIMB1GN X.laevis FIM-B.1 gene Length = 7026 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1581 aaacagtgattgagaatgtaa 1601 ||||||||||||||||||||| Sbjct: 3815 aaacagtgattgagaatgtaa 3795
>emb|BX119969.4| Mouse DNA sequence from clone RP23-58N9 on chromosome 13, complete sequence Length = 52119 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1435 agtgaggaagaactccctgct 1455 ||||||||||||||||||||| Sbjct: 10489 agtgaggaagaactccctgct 10469
>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete sequence Length = 206798 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 agaggcttcaaattcaaagagcaag 613 |||||||| |||||||||||||||| Sbjct: 2195 agaggctttaaattcaaagagcaag 2171
>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence Length = 184868 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1435 agtgaggaagaactccctgct 1455 ||||||||||||||||||||| Sbjct: 55578 agtgaggaagaactccctgct 55598
>gb|AC101962.7| Mus musculus chromosome 3, clone RP24-222A19, complete sequence Length = 198284 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 gacatatatgtcaactaaactgatc 232 |||||||||||||| |||||||||| Sbjct: 86726 gacatatatgtcaattaaactgatc 86750
>gb|AC136426.2| Homo sapiens chromosome 5 clone CTD-2008N14, complete sequence Length = 121099 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1241 tttgaggaaaatgatttccag 1261 ||||||||||||||||||||| Sbjct: 54258 tttgaggaaaatgatttccag 54238
>emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chromosome 2, complete sequence Length = 159565 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 544 aataagtgcgagacctaagcttcag 568 |||||||| |||||||||||||||| Sbjct: 32338 aataagtgtgagacctaagcttcag 32362
>emb|AL591977.1| Listeria monocytogenes strain EGD, complete genome, segment 5/12 Length = 270050 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1044 tagtacagaatctgaaagctc 1064 ||||||||||||||||||||| Sbjct: 73399 tagtacagaatctgaaagctc 73419
>emb|AL954325.8| Mouse DNA sequence from clone RP23-416H10 on chromosome 2, complete sequence Length = 195457 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1581 aaacagtgattgagaatgtaa 1601 ||||||||||||||||||||| Sbjct: 58856 aaacagtgattgagaatgtaa 58836
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1044 tagtacagaatctgaaagctc 1064 ||||||||||||||||||||| Sbjct: 964094 tagtacagaatctgaaagctc 964114
>gb|AC113507.12| Mus musculus chromosome 3, clone RP23-376O10, complete sequence Length = 210262 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 gacatatatgtcaactaaactgatc 232 |||||||||||||| |||||||||| Sbjct: 195783 gacatatatgtcaattaaactgatc 195807 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 333,811,638 Number of extensions: 17298719 Number of successful extensions: 317874 Number of sequences better than 10.0: 48 Number of HSP's gapped: 317838 Number of HSP's successfully gapped: 94 Length of query: 1816 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1793 Effective length of database: 18,503,978,556 Effective search space: 33177633550908 Effective search space used: 33177633550908 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
