ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf79k03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DQ245914.1| Zea mays clone 22346 mRNA sequence 381 e-102
2gb|AY739291.1| Zea mays protein disulfide isomerase (PDIL5-1) mR... 381 e-102
3gb|AY104619.1| Zea mays PCO130768 mRNA sequence 381 e-102
4ref|NM_001056316.1| Oryza sativa (japonica cultivar-group) Os03g... 289 7e-75
5dbj|AK063663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 7e-75
6gb|BT016382.1| Zea mays clone Contig215 mRNA sequence 190 5e-45
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 119 2e-23
8gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare str... 119 2e-23
9gb|AC150891.3| Medicago truncatula chromosome 2 BAC clone mth2-7... 60 1e-05
10ref|NM_202058.1| Arabidopsis thaliana ATPDIL5-1; electron transp... 54 8e-04
11ref|NM_202059.1| Arabidopsis thaliana ATPDIL5-1; electron transp... 54 8e-04
12ref|NM_100670.2| Arabidopsis thaliana ATPDIL5-1; electron transp... 54 8e-04
13gb|BT012051.1| Arabidopsis thaliana At1g07960 mRNA sequence 54 8e-04
14gb|BT004994.1| Arabidopsis thaliana clone U50593 unknown protein... 54 8e-04
15dbj|AK117714.1| Arabidopsis thaliana At1g07960 mRNA for unknown ... 54 8e-04
16emb|BX818734.1|CNS0ABB2 Arabidopsis thaliana Full-length cDNA Co... 54 8e-04
17emb|BX814232.1|CNS0AC3O Arabidopsis thaliana Full-length cDNA Co... 52 0.003
18gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, com... 48 0.047
19dbj|AK171064.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 44 0.73
20gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.73
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.73
22emb|AL163532.8| Human DNA sequence from clone RP11-226D23 on chr... 44 0.73
23dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.73
24dbj|AP006845.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.73
25gb|CP000487.1| Campylobacter fetus subsp. fetus 82-40, complete ... 42 2.9
26ref|XM_001008349.1| Tetrahymena thermophila SB210 hypothetical p... 42 2.9
27gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 42 2.9
28emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 42 2.9
29ref|XM_904046.2| PREDICTED: Mus musculus Ras and Rab interactor ... 42 2.9
30ref|XM_904047.2| PREDICTED: Mus musculus Ras and Rab interactor ... 42 2.9
31ref|XM_623023.3| PREDICTED: Mus musculus Ras and Rab interactor ... 42 2.9
32ref|XM_617624.2| PREDICTED: Bos taurus similar to RAB5 interacti... 42 2.9
33ref|NM_028724.2| Mus musculus Ras and Rab interactor 2 (Rin2), m... 42 2.9
34ref|XM_538804.1| PREDICTED: Canis familiaris similar to B-box an... 42 2.9
35gb|BC005529.1| Mus musculus Ras and Rab interactor 2, mRNA (cDNA... 42 2.9
36gb|AC159272.2| Mus musculus BAC clone RP23-423J20 from chromosom... 42 2.9
37dbj|AK152025.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 2.9
38dbj|AK152893.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 2.9
39dbj|AK150680.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 2.9
40dbj|AK151332.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 2.9
41dbj|AK154421.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 2.9
42dbj|AK163047.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 42 2.9
43gb|AC010059.6| Drosophila melanogaster 3L BAC RP98-17A14 (Roswel... 42 2.9
44gb|AC021749.6| Homo sapiens chromosome 11, clone RP11-810F22, co... 42 2.9
45gb|AC104507.5| Drosophila melanogaster 3L BAC RP98-26J11 (Roswel... 42 2.9
46gb|AC073437.50| Mus musculus strain 129/Sv chromosome 2 clone ct... 42 2.9
47dbj|AK014548.1| Mus musculus 0 day neonate skin cDNA, RIKEN full... 42 2.9
48dbj|AK040763.1| Mus musculus adult male aorta and vein cDNA, RIK... 42 2.9
49gb|AC019188.6| Homo sapiens BAC clone RP11-309H6 from 4, complet... 42 2.9
50emb|AL391903.15| Human DNA sequence from clone RP1-229K20 on chr... 42 2.9
51emb|AL035422.12|HS164F3 Human DNA sequence from clone RP1-164F3 ... 42 2.9
52gb|AC097717.3| Homo sapiens BAC clone RP11-650N19 from 2, comple... 42 2.9
53dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 42 2.9
54gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.64... 42 2.9
55gb|U78027.1|HSU78027 Homo sapiens Bruton's tyrosine kinase (BTK)... 42 2.9
56emb|AL672100.7| Mouse DNA sequence from clone RP23-125A1 on chro... 42 2.9

>gb|DQ245914.1| Zea mays clone 22346 mRNA sequence
          Length = 816
 Score =  381 bits (192), Expect = e-102
 Identities = 318/360 (88%)
 Strand = Plus / Plus

                                                                       
Query: 115 cctcgccgcgcgatccggcgccgaggtcatcaccctcaccgaagagaccttctccgacaa 174
           |||| ||||||| ||| | ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 143 cctcaccgcgcgctccagtgccgaagtcatcaccctcaccgaagagaccttctcggacaa 202

                                                                       
Query: 175 gataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccttggtgtaagcactg 234
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 203 gataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccctggtgtaaacactg 262

                                                                       
Query: 235 caagagcctaggaactctttgggaggacctcggaaaggtcatcgaaggtacagatgaaat 294
           ||||| ||| ||||| || ||||||||||| |||||||| || |||||| | ||||||||
Sbjct: 263 caagaaccttggaacactatgggaggacctgggaaaggttatggaaggtgcggatgaaat 322

                                                                       
Query: 295 tgaaatcggaaaagttgattgcggtgcaagcaaaccagtctgctcaaaggtggacattca 354
           ||| || ||  ||||||| || ||||  ||||||||||| ||||||||||| || || ||
Sbjct: 323 tgagattgggcaagttgactgtggtgtcagcaaaccagtatgctcaaaggtcgatataca 382

                                                                       
Query: 355 ttcatacccaacattcaaggtattctatgatggcgaagaagttgcaaaatataaagggcc 414
           ||| ||||||||||||||||| || ||||| ||||||||||| | |||||||||||| ||
Sbjct: 383 ttcctacccaacattcaaggtgttttatgaaggcgaagaagtagtaaaatataaaggacc 442

                                                                       
Query: 415 tagggatgtggaatctctcaagaattttgtgttgaacgaagctgagaaagcaggagaggc 474
           ||||||||||||||| || ||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 443 tagggatgtggaatcgctgaagaacttcgtgttgaatgaagctgagaaagcaggcgaggc 502



to top

>gb|AY739291.1| Zea mays protein disulfide isomerase (PDIL5-1) mRNA, complete cds
          Length = 781

 Score =  381 bits (192), Expect = e-102
 Identities = 318/360 (88%)
 Strand = Plus / Plus

                                                                       
Query: 115 cctcgccgcgcgatccggcgccgaggtcatcaccctcaccgaagagaccttctccgacaa 174
           |||| ||||||| ||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 107 cctcaccgcgcgctccagtgccgaagtcatcaccctcaccgaagagaccttctccgacaa 166

                                                                       
Query: 175 gataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccttggtgtaagcactg 234
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 167 gataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccctggtgtaaacactg 226

                                                                       
Query: 235 caagagcctaggaactctttgggaggacctcggaaaggtcatcgaaggtacagatgaaat 294
           ||||| ||| ||||| || ||||||||||| |||||||| || |||||| | ||||||||
Sbjct: 227 caagaaccttggaacactatgggaggacctgggaaaggttatggaaggtgcggatgaaat 286

                                                                       
Query: 295 tgaaatcggaaaagttgattgcggtgcaagcaaaccagtctgctcaaaggtggacattca 354
           ||| || ||  ||||||| || ||||  ||||||||||| ||||||||||| || || ||
Sbjct: 287 tgagattgggcaagttgactgtggtgtcagcaaaccagtatgctcaaaggtcgatataca 346

                                                                       
Query: 355 ttcatacccaacattcaaggtattctatgatggcgaagaagttgcaaaatataaagggcc 414
            || ||||||||||||||||| || ||||| ||||||||||| | |||||||||||| ||
Sbjct: 347 ctcctacccaacattcaaggtgttttatgaaggcgaagaagtagtaaaatataaaggacc 406

                                                                       
Query: 415 tagggatgtggaatctctcaagaattttgtgttgaacgaagctgagaaagcaggagaggc 474
           ||||||||||||||| || ||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 407 tagggatgtggaatcgctgaagaacttcgtgttgaatgaagctgagaaagcaggcgaggc 466



to top

>gb|AY104619.1| Zea mays PCO130768 mRNA sequence
          Length = 916

 Score =  381 bits (192), Expect = e-102
 Identities = 318/360 (88%)
 Strand = Plus / Plus

                                                                       
Query: 115 cctcgccgcgcgatccggcgccgaggtcatcaccctcaccgaagagaccttctccgacaa 174
           |||| ||||||| ||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 165 cctcaccgcgcgctccagtgccgaagtcatcaccctcaccgaagagaccttctccgacaa 224

                                                                       
Query: 175 gataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccttggtgtaagcactg 234
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 225 gataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccctggtgtaaacactg 284

                                                                       
Query: 235 caagagcctaggaactctttgggaggacctcggaaaggtcatcgaaggtacagatgaaat 294
           ||||| ||| ||||| || ||||||||||| |||||||| || |||||| | ||||||||
Sbjct: 285 caagaaccttggaacactatgggaggacctgggaaaggttatggaaggtgcggatgaaat 344

                                                                       
Query: 295 tgaaatcggaaaagttgattgcggtgcaagcaaaccagtctgctcaaaggtggacattca 354
           ||| || ||  ||||||| || ||||  ||||||||||| ||||||||||| || || ||
Sbjct: 345 tgagattgggcaagttgactgtggtgtcagcaaaccagtatgctcaaaggtcgatataca 404

                                                                       
Query: 355 ttcatacccaacattcaaggtattctatgatggcgaagaagttgcaaaatataaagggcc 414
            || ||||||||||||||||| || ||||| ||||||||||| | |||||||||||| ||
Sbjct: 405 ctcctacccaacattcaaggtgttttatgaaggcgaagaagtagtaaaatataaaggacc 464

                                                                       
Query: 415 tagggatgtggaatctctcaagaattttgtgttgaacgaagctgagaaagcaggagaggc 474
           ||||||||||||||| || ||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 465 tagggatgtggaatcgctgaagaacttcgtgttgaatgaagctgagaaagcaggcgaggc 524



to top

>ref|NM_001056316.1| Oryza sativa (japonica cultivar-group) Os03g0287900 (Os03g0287900)
           mRNA, complete cds
          Length = 686

 Score =  289 bits (146), Expect = 7e-75
 Identities = 302/354 (85%)
 Strand = Plus / Plus

                                                                       
Query: 112 ggccctcgccgcgcgatccggcgccgaggtcatcaccctcaccgaagagaccttctccga 171
           |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 113 ggccctagccgcgcgatccggcgccgaggtcatcaccctcaccgaggagaccttctccga 172

                                                                       
Query: 172 caagataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccttggtgtaagca 231
           ||||||||||||||| |||||||| ||||||||| | |||||||| || ||||| || ||
Sbjct: 173 caagataaaggagaaagacacggtatggtttgtgaagttctgcgttccatggtgcaaaca 232

                                                                       
Query: 232 ctgcaagagcctaggaactctttgggaggacctcggaaaggtcatcgaaggtacagatga 291
           ||| |||| ||| ||||| |||||||||||| | |||||||| || |||||| | |||||
Sbjct: 233 ctgtaagaaccttggaacactttgggaggacttgggaaaggttatggaaggtgcggatga 292

                                                                       
Query: 292 aattgaaatcggaaaagttgattgcggtgcaagcaaaccagtctgctcaaaggtggacat 351
           ||| || || ||  |||| || || ||||  ||||||||||| |||||||||||||| ||
Sbjct: 293 aatagagatagggcaagtggactgtggtgttagcaaaccagtatgctcaaaggtggatat 352

                                                                       
Query: 352 tcattcatacccaacattcaaggtattctatgatggcgaagaagttgcaaaatataaagg 411
            ||||| ||||| ||||||||||| || ||||| || ||||| |||||||||||||||||
Sbjct: 353 ccattcgtaccccacattcaaggtgttttatgaaggtgaagaggttgcaaaatataaagg 412

                                                                 
Query: 412 gcctagggatgtggaatctctcaagaattttgtgttgaacgaagctgagaaagc 465
            || ||  ||||||| || || ||||||||||| | | | ||||| ||||||||
Sbjct: 413 cccaagaaatgtggagtcactgaagaattttgtttcggatgaagccgagaaagc 466



to top

>dbj|AK063663.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-C07, full
           insert sequence
          Length = 686

 Score =  289 bits (146), Expect = 7e-75
 Identities = 302/354 (85%)
 Strand = Plus / Plus

                                                                       
Query: 112 ggccctcgccgcgcgatccggcgccgaggtcatcaccctcaccgaagagaccttctccga 171
           |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 113 ggccctagccgcgcgatccggcgccgaggtcatcaccctcaccgaggagaccttctccga 172

                                                                       
Query: 172 caagataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccttggtgtaagca 231
           ||||||||||||||| |||||||| ||||||||| | |||||||| || ||||| || ||
Sbjct: 173 caagataaaggagaaagacacggtatggtttgtgaagttctgcgttccatggtgcaaaca 232

                                                                       
Query: 232 ctgcaagagcctaggaactctttgggaggacctcggaaaggtcatcgaaggtacagatga 291
           ||| |||| ||| ||||| |||||||||||| | |||||||| || |||||| | |||||
Sbjct: 233 ctgtaagaaccttggaacactttgggaggacttgggaaaggttatggaaggtgcggatga 292

                                                                       
Query: 292 aattgaaatcggaaaagttgattgcggtgcaagcaaaccagtctgctcaaaggtggacat 351
           ||| || || ||  |||| || || ||||  ||||||||||| |||||||||||||| ||
Sbjct: 293 aatagagatagggcaagtggactgtggtgttagcaaaccagtatgctcaaaggtggatat 352

                                                                       
Query: 352 tcattcatacccaacattcaaggtattctatgatggcgaagaagttgcaaaatataaagg 411
            ||||| ||||| ||||||||||| || ||||| || ||||| |||||||||||||||||
Sbjct: 353 ccattcgtaccccacattcaaggtgttttatgaaggtgaagaggttgcaaaatataaagg 412

                                                                 
Query: 412 gcctagggatgtggaatctctcaagaattttgtgttgaacgaagctgagaaagc 465
            || ||  ||||||| || || ||||||||||| | | | ||||| ||||||||
Sbjct: 413 cccaagaaatgtggagtcactgaagaattttgtttcggatgaagccgagaaagc 466



to top

>gb|BT016382.1| Zea mays clone Contig215 mRNA sequence
          Length = 626

 Score =  190 bits (96), Expect = 5e-45
 Identities = 189/220 (85%)
 Strand = Plus / Plus

                                                                       
Query: 255 gggaggacctcggaaaggtcatcgaaggtacagatgaaattgaaatcggaaaagttgatt 314
           |||||||||| |||||||| || |||||| | ||||||||||| || ||  ||||||| |
Sbjct: 1   gggaggacctgggaaaggttatggaaggtgcggatgaaattgagattgggcaagttgact 60

                                                                       
Query: 315 gcggtgcaagcaaaccagtctgctcaaaggtggacattcattcatacccaacattcaagg 374
           | ||||  ||||||||||| ||||||||||| || || || || ||||||||||||||||
Sbjct: 61  gtggtgtcagcaaaccagtatgctcaaaggtcgatatacactcctacccaacattcaagg 120

                                                                       
Query: 375 tattctatgatggcgaagaagttgcaaaatataaagggcctagggatgtggaatctctca 434
           | || ||||| ||||||||||| | |||||||||||| ||||||||||||||||| || |
Sbjct: 121 tgttttatgaaggcgaagaagtagtaaaatataaaggacctagggatgtggaatcgctga 180

                                                   
Query: 435 agaattttgtgttgaacgaagctgagaaagcaggagaggc 474
           |||| || |||||||| ||||||||||||||||| |||||
Sbjct: 181 agaacttcgtgttgaatgaagctgagaaagcaggcgaggc 220



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  119 bits (60), Expect = 2e-23
 Identities = 147/176 (83%)
 Strand = Plus / Minus

                                                                           
Query: 236     aagagcctaggaactctttgggaggacctcggaaaggtcatcgaaggtacagatgaaatt 295
               |||| ||| ||||| |||||||||||| | |||||||| || |||||| | |||||||| 
Sbjct: 9924337 aagaaccttggaacactttgggaggacttgggaaaggttatggaaggtgcggatgaaata 9924278

                                                                           
Query: 296     gaaatcggaaaagttgattgcggtgcaagcaaaccagtctgctcaaaggtggacattcat 355
               || || ||  |||| || || ||||  ||||||||||| |||||||||||||| || |||
Sbjct: 9924277 gagatagggcaagtggactgtggtgttagcaaaccagtatgctcaaaggtggatatccat 9924218

                                                                       
Query: 356     tcatacccaacattcaaggtattctatgatggcgaagaagttgcaaaatataaagg 411
               || ||||| ||||||||||| || ||||| || ||||| |||||||||||||||||
Sbjct: 9924217 tcgtaccccacattcaaggtgttttatgaaggtgaagaggttgcaaaatataaagg 9924162



 Score =  111 bits (56), Expect = 4e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                           
Query: 112     ggccctcgccgcgcgatccggcgccgaggtcatcaccctcaccgaagagaccttctccga 171
               |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9925123 ggccctagccgcgcgatccggcgccgaggtcatcaccctcaccgaggagaccttctccga 9925064

                   
Query: 172     caag 175
               ||||
Sbjct: 9925063 caag 9925060



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                           
Query: 174     agataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccttggtgtaagcact 233
               ||||||||||||| |||||||| ||||||||| | |||||||| || ||||| || ||||
Sbjct: 9924497 agataaaggagaaagacacggtatggtttgtgaagttctgcgttccatggtgcaaacact 9924438

                
Query: 234     g 234
               |
Sbjct: 9924437 g 9924437



to top

>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0022M22, from chromosome 3, complete sequence
          Length = 124166

 Score =  119 bits (60), Expect = 2e-23
 Identities = 147/176 (83%)
 Strand = Plus / Minus

                                                                         
Query: 236   aagagcctaggaactctttgggaggacctcggaaaggtcatcgaaggtacagatgaaatt 295
             |||| ||| ||||| |||||||||||| | |||||||| || |||||| | |||||||| 
Sbjct: 88605 aagaaccttggaacactttgggaggacttgggaaaggttatggaaggtgcggatgaaata 88546

                                                                         
Query: 296   gaaatcggaaaagttgattgcggtgcaagcaaaccagtctgctcaaaggtggacattcat 355
             || || ||  |||| || || ||||  ||||||||||| |||||||||||||| || |||
Sbjct: 88545 gagatagggcaagtggactgtggtgttagcaaaccagtatgctcaaaggtggatatccat 88486

                                                                     
Query: 356   tcatacccaacattcaaggtattctatgatggcgaagaagttgcaaaatataaagg 411
             || ||||| ||||||||||| || ||||| || ||||| |||||||||||||||||
Sbjct: 88485 tcgtaccccacattcaaggtgttttatgaaggtgaagaggttgcaaaatataaagg 88430



 Score =  111 bits (56), Expect = 4e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                         
Query: 112   ggccctcgccgcgcgatccggcgccgaggtcatcaccctcaccgaagagaccttctccga 171
             |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 89391 ggccctagccgcgcgatccggcgccgaggtcatcaccctcaccgaggagaccttctccga 89332

                 
Query: 172   caag 175
             ||||
Sbjct: 89331 caag 89328



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 174   agataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccttggtgtaagcact 233
             ||||||||||||| |||||||| ||||||||| | |||||||| || ||||| || ||||
Sbjct: 88765 agataaaggagaaagacacggtatggtttgtgaagttctgcgttccatggtgcaaacact 88706

              
Query: 234   g 234
             |
Sbjct: 88705 g 88705



to top

>gb|AC150891.3| Medicago truncatula chromosome 2 BAC clone mth2-76a9, complete sequence
          Length = 142579

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                         
Query: 350   attcattcatacccaacattcaaggtattctatgatggcgaagaagttgcaaaatataaa 409
             ||||||||||| || || || ||||| ||||||||||| ||||||||||| |||||| ||
Sbjct: 92339 attcattcatatcctacctttaaggttttctatgatggagaagaagttgccaaatatcaa 92280

               
Query: 410   gg 411
             ||
Sbjct: 92279 gg 92278



to top

>ref|NM_202058.1| Arabidopsis thaliana ATPDIL5-1; electron transporter/
           thiol-disulfide exchange intermediate (ATPDIL5-1) mRNA,
           complete cds
          Length = 1241

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accttctccgacaagataaaggagaaggacacggtgtggtttgtgcaattctgcgtccct 220
           ||||| || |||||||||||||||||||| || | |||||| ||  | || || || |||
Sbjct: 592 accttttctgacaagataaaggagaaggatactgcgtggttcgtaaagttttgtgttcct 651

                              
Query: 221 tggtgtaagcactgcaaga 239
           |||||||| ||||||||||
Sbjct: 652 tggtgtaaacactgcaaga 670



to top

>ref|NM_202059.1| Arabidopsis thaliana ATPDIL5-1; electron transporter/
           thiol-disulfide exchange intermediate (ATPDIL5-1) mRNA,
           complete cds
          Length = 843

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accttctccgacaagataaaggagaaggacacggtgtggtttgtgcaattctgcgtccct 220
           ||||| || |||||||||||||||||||| || | |||||| ||  | || || || |||
Sbjct: 179 accttttctgacaagataaaggagaaggatactgcgtggttcgtaaagttttgtgttcct 238

                              
Query: 221 tggtgtaagcactgcaaga 239
           |||||||| ||||||||||
Sbjct: 239 tggtgtaaacactgcaaga 257



to top

>ref|NM_100670.2| Arabidopsis thaliana ATPDIL5-1; electron transporter/
           thiol-disulfide exchange intermediate (ATPDIL5-1) mRNA,
           complete cds
          Length = 849

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accttctccgacaagataaaggagaaggacacggtgtggtttgtgcaattctgcgtccct 220
           ||||| || |||||||||||||||||||| || | |||||| ||  | || || || |||
Sbjct: 200 accttttctgacaagataaaggagaaggatactgcgtggttcgtaaagttttgtgttcct 259

                              
Query: 221 tggtgtaagcactgcaaga 239
           |||||||| ||||||||||
Sbjct: 260 tggtgtaaacactgcaaga 278



to top

>gb|BT012051.1| Arabidopsis thaliana At1g07960 mRNA sequence
          Length = 366

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accttctccgacaagataaaggagaaggacacggtgtggtttgtgcaattctgcgtccct 220
           ||||| || |||||||||||||||||||| || | |||||| ||  | || || || |||
Sbjct: 25  accttttctgacaagataaaggagaaggatactgcgtggttcgtaaagttttgtgttcct 84

                              
Query: 221 tggtgtaagcactgcaaga 239
           |||||||| ||||||||||
Sbjct: 85  tggtgtaaacactgcaaga 103



to top

>gb|BT004994.1| Arabidopsis thaliana clone U50593 unknown protein (At1g07960) mRNA,
           complete cds
          Length = 472

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accttctccgacaagataaaggagaaggacacggtgtggtttgtgcaattctgcgtccct 220
           ||||| || |||||||||||||||||||| || | |||||| ||  | || || || |||
Sbjct: 100 accttttctgacaagataaaggagaaggatactgcgtggttcgtaaagttttgtgttcct 159

                              
Query: 221 tggtgtaagcactgcaaga 239
           |||||||| ||||||||||
Sbjct: 160 tggtgtaaacactgcaaga 178



to top

>dbj|AK117714.1| Arabidopsis thaliana At1g07960 mRNA for unknown protein, complete
           cds, clone: RAFL17-39-G15
          Length = 743

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accttctccgacaagataaaggagaaggacacggtgtggtttgtgcaattctgcgtccct 220
           ||||| || |||||||||||||||||||| || | |||||| ||  | || || || |||
Sbjct: 201 accttttctgacaagataaaggagaaggatactgcgtggttcgtaaagttttgtgttcct 260

                              
Query: 221 tggtgtaagcactgcaaga 239
           |||||||| ||||||||||
Sbjct: 261 tggtgtaaacactgcaaga 279



to top

>emb|BX818734.1|CNS0ABB2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL95ZG02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 843

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accttctccgacaagataaaggagaaggacacggtgtggtttgtgcaattctgcgtccct 220
           ||||| || |||||||||||||||||||| || | |||||| ||  | || || || |||
Sbjct: 179 accttttctgacaagataaaggagaaggatactgcgtggttcgtaaagttttgtgttcct 238

                              
Query: 221 tggtgtaagcactgcaaga 239
           |||||||| ||||||||||
Sbjct: 239 tggtgtaaacactgcaaga 257



to top

>emb|BX814232.1|CNS0AC3O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB62ZD09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1215

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                       
Query: 170 gacaagataaaggagaaggacacggtgtggtttgtgcaattctgcgtcccttggtgtaag 229
           |||||||||||||||||||| || | |||||| ||  | || || || ||||||||||| 
Sbjct: 601 gacaagataaaggagaaggatactgcgtggttcgtaaagttttgtgttccttggtgtaaa 660

                     
Query: 230 cactgcaaga 239
           ||||||||||
Sbjct: 661 cactgcaaga 670



to top

>gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, complete sequence
          Length = 169876

 Score = 48.1 bits (24), Expect = 0.047
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 704   caaactattttttaaaagctattt 727
             ||||||||||||||||||||||||
Sbjct: 41913 caaactattttttaaaagctattt 41936



to top

>dbj|AK171064.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630222A07
            product:Ras and Rab interactor 2, full insert sequence
          Length = 3042

 Score = 44.1 bits (22), Expect = 0.73
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 658  gaaatatttttgtaacttttaa 679
            ||||||||||||||||||||||
Sbjct: 1916 gaaatatttttgtaacttttaa 1937



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.73
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 150     tcaccgaagagaccttctccgacaag 175
               ||||||||||||||||| ||||||||
Sbjct: 1287319 tcaccgaagagaccttcaccgacaag 1287344



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.73
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 664      tttttgtaacttttaacctttt 685
                ||||||||||||||||||||||
Sbjct: 22833613 tttttgtaacttttaacctttt 22833592



to top

>emb|AL163532.8| Human DNA sequence from clone RP11-226D23 on chromosome 13, complete
            sequence
          Length = 20988

 Score = 44.1 bits (22), Expect = 0.73
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 64   ctcccgcctccctatccacctcctgc 89
            ||||||||||||| ||||||||||||
Sbjct: 3150 ctcccgcctccctttccacctcctgc 3175



to top

>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0104B02
          Length = 169588

 Score = 44.1 bits (22), Expect = 0.73
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 664  tttttgtaacttttaacctttt 685
            ||||||||||||||||||||||
Sbjct: 7451 tttttgtaacttttaacctttt 7430



to top

>dbj|AP006845.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
             fosmid clone:OSJNOa174H12
          Length = 33245

 Score = 44.1 bits (22), Expect = 0.73
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 664   tttttgtaacttttaacctttt 685
             ||||||||||||||||||||||
Sbjct: 22205 tttttgtaacttttaacctttt 22184



to top

>gb|CP000487.1| Campylobacter fetus subsp. fetus 82-40, complete genome
          Length = 1773615

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 705     aaactattttttaaaagctat 725
               |||||||||||||||||||||
Sbjct: 1386796 aaactattttttaaaagctat 1386816



to top

>ref|XM_001008349.1| Tetrahymena thermophila SB210 hypothetical protein
           (TTHERM_00013700) mRNA, complete cds
          Length = 2589

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 659 aaatatttttgtaacttttaa 679
           |||||||||||||||||||||
Sbjct: 783 aaatatttttgtaacttttaa 763



to top

>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 658      gaaatatttttgtaactttta 678
                |||||||||||||||||||||
Sbjct: 18091448 gaaatatttttgtaactttta 18091428



to top

>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 130     cggcgccgaggtcatcaccctcacc 154
               ||||| |||||||||||||||||||
Sbjct: 6886895 cggcgacgaggtcatcaccctcacc 6886871



to top

>ref|XM_904046.2| PREDICTED: Mus musculus Ras and Rab interactor 2, transcript variant
            4 (Rin2), mRNA
          Length = 2784

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 1656 aaatatttttgtaacttttaa 1676



to top

>ref|XM_904047.2| PREDICTED: Mus musculus Ras and Rab interactor 2, transcript variant
            5 (Rin2), mRNA
          Length = 2671

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 1543 aaatatttttgtaacttttaa 1563



to top

>ref|XM_623023.3| PREDICTED: Mus musculus Ras and Rab interactor 2, transcript variant
            3 (Rin2), mRNA
          Length = 4247

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 3119 aaatatttttgtaacttttaa 3139



to top

>ref|XM_617624.2| PREDICTED: Bos taurus similar to RAB5 interacting protein 2
            (LOC537459), partial mRNA
          Length = 2950

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 2792 aaatatttttgtaacttttaa 2812



to top

>ref|NM_028724.2| Mus musculus Ras and Rab interactor 2 (Rin2), mRNA
 gb|BC040390.1| Mus musculus Ras and Rab interactor 2, mRNA (cDNA clone MGC:27785
            IMAGE:3156682), complete cds
          Length = 4664

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 3524 aaatatttttgtaacttttaa 3544



to top

>ref|XM_538804.1| PREDICTED: Canis familiaris similar to B-box and SPRY domain
            containing (LOC481682), mRNA
          Length = 1047

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 5    tccccgtcttcgccgtggccg 25
            |||||||||||||||||||||
Sbjct: 1001 tccccgtcttcgccgtggccg 1021



to top

>gb|BC005529.1| Mus musculus Ras and Rab interactor 2, mRNA (cDNA clone MGC:7647
            IMAGE:3495681), complete cds
          Length = 3118

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 1963 aaatatttttgtaacttttaa 1983



to top

>gb|AC159272.2| Mus musculus BAC clone RP23-423J20 from chromosome 13, complete
             sequence
          Length = 186588

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   gcactgcaagagcctaggaac 249
             |||||||||||||||||||||
Sbjct: 66769 gcactgcaagagcctaggaac 66749



to top

>dbj|AK152025.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830045I08 product:Ras and Rab interactor
            2, full insert sequence
          Length = 3090

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 1975 aaatatttttgtaacttttaa 1995



to top

>dbj|AK152893.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830089I21 product:Ras and Rab interactor
            2, full insert sequence
          Length = 4458

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 3338 aaatatttttgtaacttttaa 3358



to top

>dbj|AK150680.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830013K04 product:Ras and Rab interactor
            2, full insert sequence
          Length = 4457

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 3338 aaatatttttgtaacttttaa 3358



to top

>dbj|AK151332.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830028C17 product:Ras and Rab interactor
            2, full insert sequence
          Length = 4414

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 3294 aaatatttttgtaacttttaa 3314



to top

>dbj|AK154421.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630030I04
            product:Ras and Rab interactor 2, full insert sequence
          Length = 3053

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 1949 aaatatttttgtaacttttaa 1969



to top

>dbj|AK163047.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A430098L20 product:Ras and Rab interactor
            2, full insert sequence
          Length = 3195

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 2515 aaatatttttgtaacttttaa 2535



to top

>gb|AC010059.6| Drosophila melanogaster 3L BAC RP98-17A14 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 171678

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 658  gaaatatttttgtaactttta 678
            |||||||||||||||||||||
Sbjct: 2015 gaaatatttttgtaactttta 2035



to top

>gb|AC021749.6| Homo sapiens chromosome 11, clone RP11-810F22, complete sequence
          Length = 193997

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 709    tattttttaaaagctatttgc 729
              |||||||||||||||||||||
Sbjct: 109835 tattttttaaaagctatttgc 109855



to top

>gb|AC104507.5| Drosophila melanogaster 3L BAC RP98-26J11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 183911

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 658    gaaatatttttgtaactttta 678
              |||||||||||||||||||||
Sbjct: 104293 gaaatatttttgtaactttta 104273



to top

>gb|AC073437.50| Mus musculus strain 129/Sv chromosome 2 clone ct7-531j6, complete
             sequence
          Length = 176056

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 659   aaatatttttgtaacttttaa 679
             |||||||||||||||||||||
Sbjct: 55813 aaatatttttgtaacttttaa 55833



to top

>dbj|AK014548.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
            library, clone:4632403N06 product:RAS INHIBITOR
            (FRAGMENT) homolog [Homo sapiens], full insert sequence
          Length = 2681

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 2001 aaatatttttgtaacttttaa 2021



to top

>dbj|AK040763.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530023H11 product:Ras inhibitor
            (clone JC265) (fragment) homolog [Homo sapiens], full
            insert sequence
          Length = 2794

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 659  aaatatttttgtaacttttaa 679
            |||||||||||||||||||||
Sbjct: 2002 aaatatttttgtaacttttaa 2022



to top

>gb|AC019188.6| Homo sapiens BAC clone RP11-309H6 from 4, complete sequence
          Length = 207835

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 659    aaatatttttgtaacttttaa 679
              |||||||||||||||||||||
Sbjct: 114043 aaatatttttgtaacttttaa 114023



to top

>emb|AL391903.15| Human DNA sequence from clone RP1-229K20 on chromosome 6 Contains 4
             pseudogenes and the TREM1 gene for  triggering receptor
             expressed on myeloid cells 1, complete sequence
          Length = 92814

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 661   atatttttgtaacttttaacctttt 685
             |||||||| ||||||||||||||||
Sbjct: 35203 atatttttctaacttttaacctttt 35179



to top

>emb|AL035422.12|HS164F3 Human DNA sequence from clone RP1-164F3 on chromosome Xq21.33-23
             Contains a ribosomal protein L21 (RPL21) pseudogene, the
             TIMM8A gene for translocase of inner mitochondrial
             membrane 8 homolog A (yeast), the BTK gene for Bruton
             agammaglobulinemia tyrosine kinase, the RPL36A gene for
             ribosomal protein L36a, the GLA gene for alpha
             galactosidase, the HNRPH2 gene for heterogeneous nuclear
             ribonucleoprotein H2 (H'), the gene for a novel protein, a
             peptidylprolyl isomerase A (cyclophilin A) (PPIA)
             pseudogene and two CpG islands, complete sequence
          Length = 136693

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 659   aaatatttttgtaacttttaa 679
             |||||||||||||||||||||
Sbjct: 91903 aaatatttttgtaacttttaa 91923



to top

>gb|AC097717.3| Homo sapiens BAC clone RP11-650N19 from 2, complete sequence
          Length = 142978

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 659   aaatatttttgtaacttttaa 679
             |||||||||||||||||||||
Sbjct: 69450 aaatatttttgtaacttttaa 69470



to top

>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 288     atgaaattgaaatcggaaaag 308
               |||||||||||||||||||||
Sbjct: 2962679 atgaaattgaaatcggaaaag 2962659



to top

>gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.642_C_21, complete sequence
          Length = 172084

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 452  gaagctgagaaagcaggagag 472
            |||||||||||||||||||||
Sbjct: 3051 gaagctgagaaagcaggagag 3071



to top

>gb|U78027.1|HSU78027 Homo sapiens Bruton's tyrosine kinase (BTK), alpha-D-galactosidase A
             (GLA), L44-like ribosomal protein (L44L) and FTP3 (FTP3)
             genes, complete cds
          Length = 99014

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 659   aaatatttttgtaacttttaa 679
             |||||||||||||||||||||
Sbjct: 13271 aaatatttttgtaacttttaa 13251



to top

>emb|AL672100.7| Mouse DNA sequence from clone RP23-125A1 on chromosome 2, complete
              sequence
          Length = 196421

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 659    aaatatttttgtaacttttaa 679
              |||||||||||||||||||||
Sbjct: 128481 aaatatttttgtaacttttaa 128501


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 142,156,460
Number of extensions: 8441836
Number of successful extensions: 166774
Number of sequences better than 10.0: 56
Number of HSP's gapped: 166762
Number of HSP's successfully gapped: 60
Length of query: 770
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 748
Effective length of database: 18,508,616,841
Effective search space: 13844445397068
Effective search space used: 13844445397068
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top