ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf82k09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121299:Os01g0571200 186 2e-47
2Os01g0805000:Os01g0805000 41 8e-04
3Os01g0303300:Os01g0303300 32 0.67
4AK108144:Os08g0157400 30 1.5
5AK098966:Os08g0461800 29 3.3
6AK066516:Os08g0461800 29 3.3
7AK105287:Os12g0511300 28 5.7
8Os11g0587300:Os11g0587300 28 7.4
9AK070106:Os02g0100700 28 7.4
10AK068943:Os02g0100700 28 7.4
11Os06g0649800:Os06g0649800 28 9.7
12Os01g0617600:Os01g0617600 28 9.7
13AK119538:Os03g0108300 28 9.7

>AK121299:Os01g0571200 |
          Length = 146
 Score =  186 bits (472), Expect = 2e-47
 Identities = 93/121 (76%), Positives = 103/121 (85%), Gaps = 7/121 (5%)
 Frame = +1

Query: 121 VRTGLPPPSLLHRIQAHVPPPP-------ASVDAHDAEVVANLTSLPGEISFPCGLPSLR 279
           +R GLPPPSLL RIQ  VPPPP        +V+A++A+ VA L+SLPGEISFPCGLPSLR
Sbjct: 25  LRAGLPPPSLLSRIQPLVPPPPPPQPRPETTVEAYEAQAVARLSSLPGEISFPCGLPSLR 84

Query: 280 FLIDDGIDPVANEPLELLPKRTYQPSTIKRKRTHGFRARKSTTGGRKVIARRIAKGRHKI 459
           F+I+DG DPVANEPLELLPKRTYQPSTIKRKRTHGF  RKST GGRKVIARRIAKGRH+I
Sbjct: 85  FIIEDGKDPVANEPLELLPKRTYQPSTIKRKRTHGFLTRKSTKGGRKVIARRIAKGRHRI 144

Query: 460 S 462
           S
Sbjct: 145 S 145



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>Os01g0805000:Os01g0805000 |
          Length = 167

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 373 RTHGFRARKSTTGGRKVIARRIAKGR 450
           RTHGFR R  TT GRKV+ RR AKGR
Sbjct: 125 RTHGFRRRMRTTAGRKVLKRRRAKGR 150



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>Os01g0303300:Os01g0303300 |
          Length = 263

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +1

Query: 136 PPPSLLHRIQAHVPPPP 186
           PPPS LHR   H PPPP
Sbjct: 58  PPPSRLHRSPPHPPPPP 74



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>AK108144:Os08g0157400 |
          Length = 176

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 136 PPPSLLHRIQAHVPPPPASVDAHDAEVVANLTSLPGEISFPCGLPSLRF 282
           PP    H   A  PPPPAS+ A  A++V      P   +    LP++R+
Sbjct: 42  PPLPDEHPAYAPPPPPPASMAALPADLVWAFQPAPEPAAIKARLPAVRY 90



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>AK098966:Os08g0461800 |
          Length = 440

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 154 HRIQAHVPPPPASVDAHDAEVVANLTSLPGEI 249
           HR +  +PPPP   D   + V A+L SLPGE+
Sbjct: 7   HR-KPRLPPPPPEGDPTASAVGASLESLPGEL 37



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>AK066516:Os08g0461800 |
          Length = 440

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 154 HRIQAHVPPPPASVDAHDAEVVANLTSLPGEI 249
           HR +  +PPPP   D   + V A+L SLPGE+
Sbjct: 7   HR-KPRLPPPPPEGDPTASAVGASLESLPGEL 37



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>AK105287:Os12g0511300 |
          Length = 179

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +1

Query: 328 LLPKRTYQPSTIKRKRTHGFRARKSTTGGRKVIARR---IAKGRHKISW*WK 474
           +LPKR+ +P   KR    G R    +TG R    RR   +  G H+  W W+
Sbjct: 74  VLPKRSQKPQATKRGIGSGPRTGGGSTGDR--FRRRRLVLPAGAHRGPWWWR 123



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>Os11g0587300:Os11g0587300 |
          Length = 738

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 9/118 (7%)
 Frame = +1

Query: 136 PPPSLLHRIQAHVPPPPAS---------VDAHDAEVVANLTSLPGEISFPCGLPSLRFLI 288
           PPP ++ R  +  P PPAS         VDA +A    +    P   + P   P+     
Sbjct: 321 PPPIVVMRPSSRPPQPPASRTSPTRRVRVDADNARRPRS----PDRAASPARSPA----- 371

Query: 289 DDGIDPVANEPLELLPKRTYQPSTIKRKRTHGFRARKSTTGGRKVIARRIAKGRHKIS 462
                P    P    P+R   P+   R +      RK +TG R  IARR   G   +S
Sbjct: 372 ----SPARRGPQS--PQRRVSPAQSPRYQP---PLRKPSTGDRSRIARRGGHGSAALS 420



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>AK070106:Os02g0100700 |
          Length = 358

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 160 IQAHVPPPPASVDAHDAEVVANLTSLPGEISFPCG 264
           +Q H  P P     HDA ++A+++ LP  +    G
Sbjct: 57  LQPHPRPSPDDASFHDARLMADVSLLPSNVRLSSG 91



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>AK068943:Os02g0100700 |
          Length = 701

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 160 IQAHVPPPPASVDAHDAEVVANLTSLPGEISFPCG 264
           +Q H  P P     HDA ++A+++ LP  +    G
Sbjct: 77  LQPHPRPSPDDASFHDARLMADVSLLPSNVRLSSG 111



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>Os06g0649800:Os06g0649800 |
          Length = 472

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +1

Query: 163 QAHVPPPPASVDAHDAEVVANLTSLPGEISFPCGLPSLR 279
           +A   PPPA   AHDA V  NL SL    S    + SLR
Sbjct: 99  RAQPQPPPARKAAHDAPVHLNL-SLNASCSSDASVESLR 136



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>Os01g0617600:Os01g0617600 |
          Length = 716

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 136 PPPSLLHRIQAHVPPPP 186
           P P +LHRI A  PPPP
Sbjct: 254 PKPPMLHRIAALRPPPP 270



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>AK119538:Os03g0108300 |
          Length = 236

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
 Frame = +1

Query: 136 PPPSLLHRIQAHVP-PPPASVDAHDAEVVANLTSLPGEISFPCGLPSLRFLIDDGIDPVA 312
           P P L  R + H+P PP   +  H   +       P ++  P  LP+LR           
Sbjct: 90  PRPPLPARRRQHIPRPPDVGLRLHLGRLRLGHRRRPLQVRLP--LPALRL---------- 137

Query: 313 NEPLELLPKRTYQPSTIKRKRTHGFRARKSTTGGRKVIARRIAKGRHKI 459
                 LP+   Q   ++ +R     AR     GR   A+R A+G H++
Sbjct: 138 -----ALPRP--QDRRLRGRRAGELPARAGVAVGRHRRAQRAAEGGHEV 179


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,322,557
Number of extensions: 464884
Number of successful extensions: 1727
Number of sequences better than 10.0: 13
Number of HSP's gapped: 1705
Number of HSP's successfully gapped: 13
Length of query: 268
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 169
Effective length of database: 11,435,796
Effective search space: 1932649524
Effective search space used: 1932649524
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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