ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf79k02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001061042.1| Oryza sativa (japonica cultivar-group) Os05g... 428 e-116
2dbj|AK068516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 420 e-114
3emb|CT828069.1| Oryza sativa (indica cultivar-group) cDNA clone:... 295 1e-76
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 230 6e-57
5dbj|AK065567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 6e-57
6gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome... 230 6e-57
7dbj|AK101005.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 8e-50
8gb|AY107497.1| Zea mays PCO100488 mRNA sequence 96 2e-16
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 84 8e-13
10emb|AL772416.6|CNS08C9U Oryza sativa chromosome 12, . BAC OSJNBa... 84 8e-13
11emb|AL731877.4|CNS08C8H Oryza sativa chromosome 12, . BAC OJ1368... 84 8e-13
12gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome... 78 5e-11
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 5e-11
14gb|AY019903.1| Oryza sativa microsatellite MRG2228 containing (C... 74 8e-10
15dbj|AK242956.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 64 8e-07
16ref|NM_001064773.1| Oryza sativa (japonica cultivar-group) Os06g... 64 8e-07
17gb|DQ246150.1| Zea mays clone 5316 mRNA sequence 60 1e-05
18gb|BT008602.1| Arabidopsis thaliana clone U20589 unknown protein... 54 7e-04
19gb|BT003875.1| Arabidopsis thaliana clone RAFL15-12-J09 (R20589)... 54 7e-04
20ref|NM_001067925.1| Oryza sativa (japonica cultivar-group) Os08g... 50 0.011
21gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.011
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.011
23emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, ... 50 0.011
24emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome 4, B... 50 0.011
25dbj|AK108529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.011
26gb|BC034181.1| Mus musculus cation channel, sperm associated 2, ... 48 0.045
27gb|AC110820.4| Mus musculus BAC clone RP23-273L3 from 15, comple... 48 0.045
28dbj|AK142380.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 48 0.045
29emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete ch... 48 0.045
30ref|NM_153075.1| Mus musculus cation channel, sperm associated 2... 48 0.045
31gb|AC154614.3| Mus musculus BAC clone RP23-255I2 from chromosome... 48 0.045
32emb|AL845466.4| Mouse DNA sequence from clone RP23-433P19 on chr... 48 0.045
33ref|XM_762139.1| Giardia lamblia ATCC 50803 hypothetical protein... 48 0.045
34ref|NM_135399.2| Drosophila melanogaster Sema-1a CG18405-RB, tra... 46 0.18
35ref|NM_001069758.1| Oryza sativa (japonica cultivar-group) Os09g... 46 0.18
36ref|NM_001058464.1| Oryza sativa (japonica cultivar-group) Os03g... 46 0.18
37gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete s... 46 0.18
38gb|BT016475.1| Zea mays clone Contig308 mRNA sequence 46 0.18
39gb|AY224518.1| Oryza sativa (japonica cultivar-group) isolate 20... 46 0.18
40ref|NM_164830.3| Drosophila melanogaster Sema-1a CG18405-RA, tra... 46 0.18
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.18
42emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmi... 46 0.18
43gb|AC008331.7|AC008331 Drosophila melanogaster, chromosome 2L, r... 46 0.18
44dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.18
45ref|XM_956213.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.18
46dbj|AK109128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.18
47dbj|AK106158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.18
48emb|BX828681.1|CNS0A2IF Arabidopsis thaliana Full-length cDNA Co... 46 0.18
49dbj|AK061801.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.18
50gb|AF082030.1|AF082030 Hemerocallis hybrid cultivar senescence-a... 46 0.18
51gb|L26082.1|DRODSEM Drosophila melanogastor semaphorin-I (Dsema-... 46 0.18
52gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.71
53dbj|AK236853.1| Sus scrofa mRNA, clone:PBL010025D01, expressed i... 42 2.8
54ref|XM_001173773.1| PREDICTED: Pan troglodytes potassium interme... 42 2.8
55ref|XM_524155.2| PREDICTED: Pan troglodytes potassium intermedia... 42 2.8
56ref|XM_001173749.1| PREDICTED: Pan troglodytes potassium interme... 42 2.8
57ref|XM_001173769.1| PREDICTED: Pan troglodytes potassium interme... 42 2.8
58ref|XM_001120155.1| PREDICTED: Apis mellifera similar to CG11966... 42 2.8
59ref|XM_001115129.1| PREDICTED: Macaca mulatta potassium intermed... 42 2.8
60gb|CP000097.1| Synechococcus sp. CC9902, complete genome 42 2.8
61ref|NM_002248.3| Homo sapiens potassium intermediate/small condu... 42 2.8
62gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.8
63gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, comp... 42 2.8
64gb|AC132118.3| Mus musculus BAC clone RP23-467C14 from chromosom... 42 2.8
65gb|AC162802.4| Mus musculus BAC clone RP23-363M4 from chromosome... 42 2.8
66gb|BC075037.2| Homo sapiens potassium intermediate/small conduct... 42 2.8
67ref|XM_460054.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 2.8
68ref|XM_756696.1| Ustilago maydis 521 hypothetical protein (UM056... 42 2.8
69ref|NM_001027854.1| Caenorhabditis elegans GRound-Like (grd rela... 42 2.8
70emb|Z12018.1|CEZK638 Caenorhabditis elegans Cosmid ZK638, comple... 42 2.8
71dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.8
72gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, comple... 42 2.8
73dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.8
74dbj|AB198191.1| Homo sapiens KCNN1 mRNA for small-conductance ca... 42 2.8
75emb|Z26879.1|SCRPS8SFC S.cerevisiae genes for small subunit ribo... 42 2.8
76gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.8
77emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 42 2.8
78emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 42 2.8
79ref|XM_569760.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 2.8
80gb|U69883.2|HSU69883 Homo sapiens small-conductance, calcium-act... 42 2.8
81gb|DQ331554.1| Synthetic construct Saccharomyces cerevisiae clon... 42 2.8
82emb|Z35835.1|SCYBL074C S.cerevisiae chromosome II reading frame ... 42 2.8
83gb|AF131940.1|HSKCNN03 Homo sapiens small-conductance calcium-ac... 42 2.8
84dbj|D90455.1|YSCAAR2 Saccharomyces cerevisiae AAR2 gene, complet... 42 2.8
85gb|M36115.1|YSCSSA3A S.cerevisiae heat shock protein gene (SSA3) 42 2.8

>ref|NM_001061042.1| Oryza sativa (japonica cultivar-group) Os05g0122800 (Os05g0122800)
            mRNA, complete cds
          Length = 1455
 Score =  428 bits (216), Expect = e-116
 Identities = 463/544 (85%), Gaps = 1/544 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    taccagctctccgactacaacggctggctccgcggccgcgtcgccgaccccgactactgg 60
            ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 538  taccagctctccgactacaacggatggctccgcgaccgcgtcgccgaccccgcctactgg 597

                                                                        
Query: 61   gccaccatcagcgcatgcctccgcgacgg-cacgcctgccgctccatgcgccgccccgtc 119
            |||||||||||||| |||||||||||||| | |||||||  | |||||||||||  || |
Sbjct: 598  gccaccatcagcgcctgcctccgcgacggccgcgcctgcgccgccatgcgccgcttcgcc 657

                                                                        
Query: 120  cgcgaccccaacaccggcatgctcgtcctcgagcccgccgtcgtcttctacggccgcgac 179
            |||||||||||||||||||||||||||| |||| || ||  | | ||||||| |||||||
Sbjct: 658  cgcgaccccaacaccggcatgctcgtccccgagaccccctccatgttctacgcccgcgac 717

                                                                        
Query: 180  ctctccccgattcagtctggatgctgcaagccaccgacgtcatgtgcgttcacctacaac 239
            |||||||| || ||||||||||||||||||||||| || || ||||| | || |||    
Sbjct: 718  ctctcccccatccagtctggatgctgcaagccaccaacatcgtgtgcatacaactatgtt 777

                                                                        
Query: 240  aacgagacgtactggagcgcgaaccccggcgttcccaccgtggtgaccgaccccgactgc 299
            ||||| |||| ||||| ||| ||||| |||||||| ||||| ||||  ||    ||||||
Sbjct: 778  aacgaaacgttctggaccgcaaaccctggcgttccgaccgtcgtgaatgatgtggactgc 837

                                                                        
Query: 300  ctcaaatggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggc 359
              ||| |||||||| |||||||||||| | ||||||||||| ||||| |||||||| |||
Sbjct: 838  agcaagtggagcaatgaccagcagacgctttgcttccagtgtgactcctgcaaggcaggc 897

                                                                        
Query: 360  gtcctggccggcatcaagaagagctggcgcaaggtggccatcatcaacatcgtcgtgctc 419
            ||||| || |||||||||||||||||||| ||||| |||||| |||||||||||||||| 
Sbjct: 898  gtcctcgctggcatcaagaagagctggcgtaaggttgccatcctcaacatcgtcgtgctg 957

                                                                        
Query: 420  atcatcctcgtcatcgtctacgtcgccggctgcgccgcgttccgcaacgccaagagggac 479
            ||||||||||||||||| || || || ||||| ||||| ||||||||||||| ||||  |
Sbjct: 958  atcatcctcgtcatcgtgtatgttgctggctgtgccgctttccgcaacgccaggaggatc 1017

                                                                        
Query: 480  gacaacgatgagtcgtacggcatggccaggatgaccaagtcccggccgagcaggttccag 539
            || ||||| ||| |||  || ||||| |||||||||||| | |  || ||||||||||||
Sbjct: 1018 gaaaacgacgagccgtttggtatggcaaggatgaccaagactcaacctagcaggttccag 1077

                
Query: 540  ttct 543
            ||||
Sbjct: 1078 ttct 1081



to top

>dbj|AK068516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M14, full
            insert sequence
          Length = 1458

 Score =  420 bits (212), Expect = e-114
 Identities = 462/544 (84%), Gaps = 1/544 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    taccagctctccgactacaacggctggctccgcggccgcgtcgccgaccccgactactgg 60
            ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 539  taccagctctccgactacaacggatggctccgcgaccgcgtcgccgaccccgcctactgg 598

                                                                        
Query: 61   gccaccatcagcgcatgcctccgcgacgg-cacgcctgccgctccatgcgccgccccgtc 119
            |||||||||||||| |||||||||||||| | |||||||  | |||||||||||  || |
Sbjct: 599  gccaccatcagcgcctgcctccgcgacggccgcgcctgcgccgccatgcgccgcttcgcc 658

                                                                        
Query: 120  cgcgaccccaacaccggcatgctcgtcctcgagcccgccgtcgtcttctacggccgcgac 179
            |||||||||||||||||||||||||||| |||| || ||  | | ||||||| |||||||
Sbjct: 659  cgcgaccccaacaccggcatgctcgtccccgagaccccctccatgttctacgcccgcgac 718

                                                                        
Query: 180  ctctccccgattcagtctggatgctgcaagccaccgacgtcatgtgcgttcacctacaac 239
            |||||||| || ||||||||||||||||||||||| || || ||||| | || |||    
Sbjct: 719  ctctcccccatccagtctggatgctgcaagccaccaacatcgtgtgcatacaactatgtt 778

                                                                        
Query: 240  aacgagacgtactggagcgcgaaccccggcgttcccaccgtggtgaccgaccccgactgc 299
            ||||| |||| ||||| |||  |||| |||||||| ||||| ||||  ||    ||||||
Sbjct: 779  aacgaaacgttctggaccgcataccctggcgttccgaccgtcgtgaatgatgtggactgc 838

                                                                        
Query: 300  ctcaaatggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggc 359
              ||| |||||||| |||||||||||| | ||||||||||| ||||| |||||||| |||
Sbjct: 839  agcaagtggagcaatgaccagcagacgctttgcttccagtgtgactcctgcaaggcaggc 898

                                                                        
Query: 360  gtcctggccggcatcaagaagagctggcgcaaggtggccatcatcaacatcgtcgtgctc 419
            ||||| || |||||||||||||||||||| ||||| |||||| |||||||||||||||| 
Sbjct: 899  gtcctcgctggcatcaagaagagctggcgtaaggttgccatcctcaacatcgtcgtgctg 958

                                                                        
Query: 420  atcatcctcgtcatcgtctacgtcgccggctgcgccgcgttccgcaacgccaagagggac 479
            ||||||||||||||||| || || || ||||| ||||| ||||||||||||| ||||  |
Sbjct: 959  atcatcctcgtcatcgtgtatgttgctggctgtgccgctttccgcaacgccaggaggatc 1018

                                                                        
Query: 480  gacaacgatgagtcgtacggcatggccaggatgaccaagtcccggccgagcaggttccag 539
            || ||||| ||| |||  || ||||| |||||||||||| | |  || ||||||||||||
Sbjct: 1019 gaaaacgacgagccgtttggtatggcaaggatgaccaagactcaacctagcaggttccag 1078

                
Query: 540  ttct 543
            ||||
Sbjct: 1079 ttct 1082



to top

>emb|CT828069.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117H19, full
            insert sequence
          Length = 1274

 Score =  295 bits (149), Expect = 1e-76
 Identities = 366/437 (83%), Gaps = 1/437 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    taccagctctccgactacaacggctggctccgcggccgcgtcgccgaccccgactactgg 60
            ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 573  taccagctctccgactacaacggatggctccgcgaccgcgtcgccgaccccgcctactgg 632

                                                                        
Query: 61   gccaccatcagcgcatgcctccgcgacgg-cacgcctgccgctccatgcgccgccccgtc 119
            |||||||||||||| |||||||||||||| | |||||||  | |||||||||||  || |
Sbjct: 633  gccaccatcagcgcctgcctccgcgacggccgcgcctgcgccgccatgcgccgcttcgcc 692

                                                                        
Query: 120  cgcgaccccaacaccggcatgctcgtcctcgagcccgccgtcgtcttctacggccgcgac 179
            |||||||||||||||||||||||||||| |||| || ||  | | ||||||| |||||||
Sbjct: 693  cgcgaccccaacaccggcatgctcgtccccgagaccccctccatgttctacgcccgcgac 752

                                                                        
Query: 180  ctctccccgattcagtctggatgctgcaagccaccgacgtcatgtgcgttcacctacaac 239
            |||||||| || ||||||||||||||||||||||| || || ||||| | || |||    
Sbjct: 753  ctctcccccatccagtctggatgctgcaagccaccaacatcgtgtgcatacaactatgtg 812

                                                                        
Query: 240  aacgagacgtactggagcgcgaaccccggcgttcccaccgtggtgaccgaccccgactgc 299
            ||||| ||||  |||  ||| ||||| ||||||||  |||| |||| |||    |||| |
Sbjct: 813  aacgaaacgttttggcccgcaaaccctggcgttccgcccgtcgtgaacgatgtggactcc 872

                                                                        
Query: 300  ctcaaatggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggc 359
              ||| |||| ||| ||||| |||||  | ||||||||||| ||||| |||||||| || 
Sbjct: 873  accaagtggaccaatgaccaccagaccctttgcttccagtgtgactcctgcaaggcaggg 932

                                                                        
Query: 360  gtcctggccggcatcaagaagagctggcgcaaggtggccatcatcaacatcgtcgtgctc 419
            ||||| || |||||||| || |||||| | ||||| ||| || |||||||||||||||| 
Sbjct: 933  gtcctcgctggcatcaaaaaaagctggggtaaggttgccctcctcaacatcgtcgtgctg 992

                             
Query: 420  atcatcctcgtcatcgt 436
            |||||||||||||||||
Sbjct: 993  atcatcctcgtcatcgt 1009



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  230 bits (116), Expect = 6e-57
 Identities = 293/352 (83%)
 Strand = Plus / Plus

                                                                           
Query: 192     cagtctggatgctgcaagccaccgacgtcatgtgcgttcacctacaacaacgagacgtac 251
               ||||||||||||||||||||||| || || ||||| | || |||    ||||| |||| |
Sbjct: 1197605 cagtctggatgctgcaagccaccaacatcgtgtgcatacaactatgttaacgaaacgttc 1197664

                                                                           
Query: 252     tggagcgcgaaccccggcgttcccaccgtggtgaccgaccccgactgcctcaaatggagc 311
               |||| ||| ||||| |||||||| ||||| ||||  ||    ||||||  ||| ||||||
Sbjct: 1197665 tggaccgcaaaccctggcgttccgaccgtcgtgaatgatgtggactgcagcaagtggagc 1197724

                                                                           
Query: 312     aacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcctggccggc 371
               || |||||||||||| | ||||||||||| ||||| |||||||| |||||||| || |||
Sbjct: 1197725 aatgaccagcagacgctttgcttccagtgtgactcctgcaaggcaggcgtcctcgctggc 1197784

                                                                           
Query: 372     atcaagaagagctggcgcaaggtggccatcatcaacatcgtcgtgctcatcatcctcgtc 431
               ||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||
Sbjct: 1197785 atcaagaagagctggcgtaaggttgccatcctcaacatcgtcgtgctgatcatcctcgtc 1197844

                                                                           
Query: 432     atcgtctacgtcgccggctgcgccgcgttccgcaacgccaagagggacgacaacgatgag 491
               ||||| || || || ||||| ||||| ||||||||||||| ||||  ||| ||||| |||
Sbjct: 1197845 atcgtgtatgttgctggctgtgccgctttccgcaacgccaggaggatcgaaaacgacgag 1197904

                                                                   
Query: 492     tcgtacggcatggccaggatgaccaagtcccggccgagcaggttccagttct 543
                |||  || ||||| |||||||||||| | |  || ||||||||||||||||
Sbjct: 1197905 ccgtttggtatggcaaggatgaccaagactcaacctagcaggttccagttct 1197956



 Score =  206 bits (104), Expect = 8e-50
 Identities = 168/188 (89%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                           
Query: 1       taccagctctccgactacaacggctggctccgcggccgcgtcgccgaccccgactactgg 60
               ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 1194740 taccagctctccgactacaacggatggctccgcgaccgcgtcgccgaccccgcctactgg 1194799

                                                                           
Query: 61      gccaccatcagcgcatgcctccgcgacgg-cacgcctgccgctccatgcgccgccccgtc 119
               |||||||||||||| |||||||||||||| | |||||||  | |||||||||||  || |
Sbjct: 1194800 gccaccatcagcgcctgcctccgcgacggccgcgcctgcgccgccatgcgccgcttcgcc 1194859

                                                                           
Query: 120     cgcgaccccaacaccggcatgctcgtcctcgagcccgccgtcgtcttctacggccgcgac 179
               |||||||||||||||||||||||||||| |||| || ||  | | ||||||| |||||||
Sbjct: 1194860 cgcgaccccaacaccggcatgctcgtccccgagaccccctccatgttctacgcccgcgac 1194919

                       
Query: 180     ctctcccc 187
               ||||||||
Sbjct: 1194920 ctctcccc 1194927



to top

>dbj|AK065567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033D20, full
            insert sequence
          Length = 2066

 Score =  230 bits (116), Expect = 6e-57
 Identities = 293/352 (83%)
 Strand = Plus / Plus

                                                                        
Query: 192  cagtctggatgctgcaagccaccgacgtcatgtgcgttcacctacaacaacgagacgtac 251
            ||||||||||||||||||||||| || || ||||| | || |||    ||||| |||| |
Sbjct: 1375 cagtctggatgctgcaagccaccaacatcgtgtgcatacaactatgttaacgaaacgttc 1434

                                                                        
Query: 252  tggagcgcgaaccccggcgttcccaccgtggtgaccgaccccgactgcctcaaatggagc 311
            |||| ||| ||||| |||||||| ||||| ||||  ||    ||||||  ||| ||||||
Sbjct: 1435 tggaccgcaaaccctggcgttccgaccgtcgtgaatgatgtggactgcagcaagtggagc 1494

                                                                        
Query: 312  aacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcctggccggc 371
            || |||||||||||| | ||||||||||| ||||| |||||||| |||||||| || |||
Sbjct: 1495 aatgaccagcagacgctttgcttccagtgtgactcctgcaaggcaggcgtcctcgctggc 1554

                                                                        
Query: 372  atcaagaagagctggcgcaaggtggccatcatcaacatcgtcgtgctcatcatcctcgtc 431
            ||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||
Sbjct: 1555 atcaagaagagctggcgtaaggttgccatcctcaacatcgtcgtgctgatcatcctcgtc 1614

                                                                        
Query: 432  atcgtctacgtcgccggctgcgccgcgttccgcaacgccaagagggacgacaacgatgag 491
            ||||| || || || ||||| ||||| ||||||||||||| ||||  ||| ||||| |||
Sbjct: 1615 atcgtgtatgttgctggctgtgccgctttccgcaacgccaggaggatcgaaaacgacgag 1674

                                                                
Query: 492  tcgtacggcatggccaggatgaccaagtcccggccgagcaggttccagttct 543
             |||  || ||||| |||||||||||| | |  || ||||||||||||||||
Sbjct: 1675 ccgtttggtatggcaaggatgaccaagactcaacctagcaggttccagttct 1726



to top

>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02,
             complete sequence
          Length = 90509

 Score =  230 bits (116), Expect = 6e-57
 Identities = 293/352 (83%)
 Strand = Plus / Plus

                                                                         
Query: 192   cagtctggatgctgcaagccaccgacgtcatgtgcgttcacctacaacaacgagacgtac 251
             ||||||||||||||||||||||| || || ||||| | || |||    ||||| |||| |
Sbjct: 47891 cagtctggatgctgcaagccaccaacatcgtgtgcatacaactatgttaacgaaacgttc 47950

                                                                         
Query: 252   tggagcgcgaaccccggcgttcccaccgtggtgaccgaccccgactgcctcaaatggagc 311
             |||| ||| ||||| |||||||| ||||| ||||  ||    ||||||  ||| ||||||
Sbjct: 47951 tggaccgcaaaccctggcgttccgaccgtcgtgaatgatgtggactgcagcaagtggagc 48010

                                                                         
Query: 312   aacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcctggccggc 371
             || |||||||||||| | ||||||||||| ||||| |||||||| |||||||| || |||
Sbjct: 48011 aatgaccagcagacgctttgcttccagtgtgactcctgcaaggcaggcgtcctcgctggc 48070

                                                                         
Query: 372   atcaagaagagctggcgcaaggtggccatcatcaacatcgtcgtgctcatcatcctcgtc 431
             ||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||
Sbjct: 48071 atcaagaagagctggcgtaaggttgccatcctcaacatcgtcgtgctgatcatcctcgtc 48130

                                                                         
Query: 432   atcgtctacgtcgccggctgcgccgcgttccgcaacgccaagagggacgacaacgatgag 491
             ||||| || || || ||||| ||||| ||||||||||||| ||||  ||| ||||| |||
Sbjct: 48131 atcgtgtatgttgctggctgtgccgctttccgcaacgccaggaggatcgaaaacgacgag 48190

                                                                 
Query: 492   tcgtacggcatggccaggatgaccaagtcccggccgagcaggttccagttct 543
              |||  || ||||| |||||||||||| | |  || ||||||||||||||||
Sbjct: 48191 ccgtttggtatggcaaggatgaccaagactcaacctagcaggttccagttct 48242



 Score =  206 bits (104), Expect = 8e-50
 Identities = 168/188 (89%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     taccagctctccgactacaacggctggctccgcggccgcgtcgccgaccccgactactgg 60
             ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 45026 taccagctctccgactacaacggatggctccgcgaccgcgtcgccgaccccgcctactgg 45085

                                                                         
Query: 61    gccaccatcagcgcatgcctccgcgacgg-cacgcctgccgctccatgcgccgccccgtc 119
             |||||||||||||| |||||||||||||| | |||||||  | |||||||||||  || |
Sbjct: 45086 gccaccatcagcgcctgcctccgcgacggccgcgcctgcgccgccatgcgccgcttcgcc 45145

                                                                         
Query: 120   cgcgaccccaacaccggcatgctcgtcctcgagcccgccgtcgtcttctacggccgcgac 179
             |||||||||||||||||||||||||||| |||| || ||  | | ||||||| |||||||
Sbjct: 45146 cgcgaccccaacaccggcatgctcgtccccgagaccccctccatgttctacgcccgcgac 45205

                     
Query: 180   ctctcccc 187
             ||||||||
Sbjct: 45206 ctctcccc 45213



to top

>dbj|AK101005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147M12, full
           insert sequence
          Length = 2183

 Score =  206 bits (104), Expect = 8e-50
 Identities = 168/188 (89%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taccagctctccgactacaacggctggctccgcggccgcgtcgccgaccccgactactgg 60
           ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 489 taccagctctccgactacaacggatggctccgcgaccgcgtcgccgaccccgcctactgg 548

                                                                       
Query: 61  gccaccatcagcgcatgcctccgcgacgg-cacgcctgccgctccatgcgccgccccgtc 119
           |||||||||||||| |||||||||||||| | |||||||  | |||||||||||  || |
Sbjct: 549 gccaccatcagcgcctgcctccgcgacggccgcgcctgcgccgccatgcgccgcttcgcc 608

                                                                       
Query: 120 cgcgaccccaacaccggcatgctcgtcctcgagcccgccgtcgtcttctacggccgcgac 179
           |||||||||||||||||||||||||||| |||| || ||  | | ||||||| |||||||
Sbjct: 609 cgcgaccccaacaccggcatgctcgtccccgagaccccctccatgttctacgcccgcgac 668

                   
Query: 180 ctctcccc 187
           ||||||||
Sbjct: 669 ctctcccc 676



to top

>gb|AY107497.1| Zea mays PCO100488 mRNA sequence
          Length = 836

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                       
Query: 452 cgccgcgttccgcaacgccaagagggacgacaacgatgagtcgtacggcatggccaggat 511
           |||||||||||||||||||||||||  ||||||||| ||| ||   ||||||||  ||||
Sbjct: 446 cgccgcgttccgcaacgccaagaggatcgacaacgacgagccggtgggcatggcgcggat 505

                                               
Query: 512 gaccaagtcccggccgagcaggttccagttctaggc 547
           |||||||||||  || ||||||||||||||||||||
Sbjct: 506 gaccaagtcccatccaagcaggttccagttctaggc 541



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                           
Query: 306     tggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcctg 365
               ||||||||| |||| |||||| | ||||||||||||||||| |||||||||||| |||||
Sbjct: 8328366 tggagcaacaaccaacagacgctctgcttccagtgcgactcatgcaaggctggcttcctg 8328425

                             
Query: 366     gccggcatcaagaa 379
               | || |||||||||
Sbjct: 8328426 gacgacatcaagaa 8328439



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                 
Query: 192     cagtctggatgctgcaagccaccgacgtcatgtg 225
               |||||||||||||||||||||||||| |||||||
Sbjct: 8328243 cagtctggatgctgcaagccaccgacatcatgtg 8328276



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                           
Query: 16      tacaacggctggctccgcggccgcgtcgccgaccccgactactgggccaccatcagcgca 75
               |||| ||| |||||| | ||||| || ||||||||  |||||||||  || | |||||||
Sbjct: 8327266 tacagcgggtggctcaggggccgtgtggccgacccgcactactgggaaacaaccagcgca 8327325

                             
Query: 76      tgcctccgcgacgg 89
               ||||| ||||||||
Sbjct: 8327326 tgcctacgcgacgg 8327339



to top

>emb|AL772416.6|CNS08C9U Oryza sativa chromosome 12, . BAC OSJNBa0095H15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 142670

 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 306   tggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcctg 365
             ||||||||| |||| |||||| | ||||||||||||||||| |||||||||||| |||||
Sbjct: 14527 tggagcaacaaccaacagacgctctgcttccagtgcgactcatgcaaggctggcttcctg 14468

                           
Query: 366   gccggcatcaagaa 379
             | || |||||||||
Sbjct: 14467 gacgacatcaagaa 14454



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 192   cagtctggatgctgcaagccaccgacgtcatgtg 225
             |||||||||||||||||||||||||| |||||||
Sbjct: 14650 cagtctggatgctgcaagccaccgacatcatgtg 14617



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                         
Query: 16    tacaacggctggctccgcggccgcgtcgccgaccccgactactgggccaccatcagcgca 75
             |||| ||| |||||| | ||||| || ||||||||  |||||||||  || | |||||||
Sbjct: 15627 tacagcgggtggctcaggggccgtgtggccgacccgcactactgggaaacaaccagcgca 15568

                           
Query: 76    tgcctccgcgacgg 89
             ||||| ||||||||
Sbjct: 15567 tgcctacgcgacgg 15554



to top

>emb|AL731877.4|CNS08C8H Oryza sativa chromosome 12, . BAC OJ1368_F07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104296

 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 306   tggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcctg 365
             ||||||||| |||| |||||| | ||||||||||||||||| |||||||||||| |||||
Sbjct: 72131 tggagcaacaaccaacagacgctctgcttccagtgcgactcatgcaaggctggcttcctg 72072

                           
Query: 366   gccggcatcaagaa 379
             | || |||||||||
Sbjct: 72071 gacgacatcaagaa 72058



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 192   cagtctggatgctgcaagccaccgacgtcatgtg 225
             |||||||||||||||||||||||||| |||||||
Sbjct: 72254 cagtctggatgctgcaagccaccgacatcatgtg 72221



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                         
Query: 16    tacaacggctggctccgcggccgcgtcgccgaccccgactactgggccaccatcagcgca 75
             |||| ||| |||||| | ||||| || ||||||||  |||||||||  || | |||||||
Sbjct: 73231 tacagcgggtggctcaggggccgtgtggccgacccgcactactgggaaacaaccagcgca 73172

                           
Query: 76    tgcctccgcgacgg 89
             ||||| ||||||||
Sbjct: 73171 tgcctacgcgacgg 73158



to top

>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08
             map S15179S, complete sequence
          Length = 166005

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                        
Query: 306   tggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcct 364
             |||||||||||||| || ||| | |||||||||||||||||||||||||||||| ||||
Sbjct: 11635 tggagcaacgaccatcaaacgctttgcttccagtgcgactcgtgcaaggctggcttcct 11693



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 192   cagtctggatgctgcaagccacc 214
             |||||||||||||||||||||||
Sbjct: 11491 cagtctggatgctgcaagccacc 11513



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 306   tggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcct 364
             |||||||||||||| || | | | |||||||||||||| || |||||||| ||| ||||
Sbjct: 17509 tggagcaacgaccaacaaaagctctgcttccagtgcgattcatgcaaggcaggcttcct 17567



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 193   agtctggatgctgcaagccacc 214
             ||||||||||||||||||||||
Sbjct: 17402 agtctggatgctgcaagccacc 17423



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                           
Query: 306      tggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcct 364
                |||||||||||||| || ||| | |||||||||||||||||||||||||||||| ||||
Sbjct: 35703930 tggagcaacgaccatcaaacgctttgcttccagtgcgactcgtgcaaggctggcttcct 35703988



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 192      cagtctggatgctgcaagccacc 214
                |||||||||||||||||||||||
Sbjct: 35703786 cagtctggatgctgcaagccacc 35703808



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                           
Query: 306      tggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcct 364
                |||||||||||||| || | | | |||||||||||||| || |||||||| ||| ||||
Sbjct: 35709804 tggagcaacgaccaacaaaagctctgcttccagtgcgattcatgcaaggcaggcttcct 35709862



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 193      agtctggatgctgcaagccacc 214
                ||||||||||||||||||||||
Sbjct: 35709697 agtctggatgctgcaagccacc 35709718



to top

>gb|AY019903.1| Oryza sativa microsatellite MRG2228 containing (CT)X12, closest to
           marker S2136, genomic sequence
          Length = 224

 Score = 73.8 bits (37), Expect = 8e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 119 ccgcgaccccaacaccggcatgctcgtcctcgagcccgccgtcgtcttctacggccgcga 178
           ||||||||||||||||||||||||||||| |||| || ||  | | ||||||| ||||||
Sbjct: 3   ccgcgaccccaacaccggcatgctcgtccccgagaccccctccatgttctacgcccgcga 62

                    
Query: 179 cctctcccc 187
           |||||||||
Sbjct: 63  cctctcccc 71



to top

>dbj|AK242956.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090089G04,
           full insert sequence
          Length = 1243

 Score = 63.9 bits (32), Expect = 8e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 180 ctctccccgattcagtctggatgctgcaagcc 211
           ||||||||||||||||||||||||||||||||
Sbjct: 557 ctctccccgattcagtctggatgctgcaagcc 588



to top

>ref|NM_001064773.1| Oryza sativa (japonica cultivar-group) Os06g0653100 (Os06g0653100)
           mRNA, complete cds
          Length = 810

 Score = 63.9 bits (32), Expect = 8e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 180 ctctccccgattcagtctggatgctgcaagcc 211
           ||||||||||||||||||||||||||||||||
Sbjct: 490 ctctccccgattcagtctggatgctgcaagcc 521



to top

>gb|DQ246150.1| Zea mays clone 5316 mRNA sequence
          Length = 728

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 186 ccgattcagtctggatgctgcaagccaccgacgtcatg 223
           ||||| |||||||||||||||||||||||||| |||||
Sbjct: 203 ccgatacagtctggatgctgcaagccaccgacatcatg 240



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 328 tgtgcttccagtgcgactcgtgcaa 352
           |||||| ||||||||||||||||||
Sbjct: 327 tgtgctaccagtgcgactcgtgcaa 351



to top

>gb|BT008602.1| Arabidopsis thaliana clone U20589 unknown protein (At4g23410) mRNA,
           complete cds
          Length = 877

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 190 ttcagtctggatgctgcaagccaccgacgtc 220
           ||||||||||||||||||| |||||||||||
Sbjct: 488 ttcagtctggatgctgcaaaccaccgacgtc 518



to top

>gb|BT003875.1| Arabidopsis thaliana clone RAFL15-12-J09 (R20589) unknown protein
           (At4g23410) mRNA, complete cds
          Length = 1118

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 190 ttcagtctggatgctgcaagccaccgacgtc 220
           ||||||||||||||||||| |||||||||||
Sbjct: 629 ttcagtctggatgctgcaaaccaccgacgtc 659



to top

>ref|NM_001067925.1| Oryza sativa (japonica cultivar-group) Os08g0260600 (Os08g0260600)
           mRNA, complete cds
          Length = 1090

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 178 acctctccccgattcagtctggatgctgcaagccacc 214
           ||||||| ||| | |||||||||||||||||||||||
Sbjct: 512 acctctcgccgctgcagtctggatgctgcaagccacc 548



to top

>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0096A19 map near 50283S, complete sequence
          Length = 139969

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 398   catcatcaacatcgtcgtgctcatcatcctcgtcatc 434
             |||||||| ||||||| | ||||||||||||||||||
Sbjct: 61863 catcatcatcatcgtcatcctcatcatcctcgtcatc 61899



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 398      catcatcaacatcgtcgtgctcatcatcctcgtcatc 434
                |||||||| ||||||| | ||||||||||||||||||
Sbjct: 13824304 catcatcatcatcgtcatcctcatcatcctcgtcatc 13824340



to top

>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59
          Length = 199199

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 192   cagtctggatgctgcaagccaccgacgtc 220
             ||||||||||||||||| |||||||||||
Sbjct: 78320 cagtctggatgctgcaaaccaccgacgtc 78348



to top

>emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome 4, BAC clone F16G20 (ESSAII
             project)
          Length = 97006

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 192   cagtctggatgctgcaagccaccgacgtc 220
             ||||||||||||||||| |||||||||||
Sbjct: 36788 cagtctggatgctgcaaaccaccgacgtc 36816



to top

>dbj|AK108529.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-B12, full
           insert sequence
          Length = 1090

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 178 acctctccccgattcagtctggatgctgcaagccacc 214
           ||||||| ||| | |||||||||||||||||||||||
Sbjct: 512 acctctcgccgctgcagtctggatgctgcaagccacc 548



to top

>gb|BC034181.1| Mus musculus cation channel, sperm associated 2, mRNA (cDNA clone
           IMAGE:4973163), with apparent retained intron
          Length = 2283

 Score = 48.1 bits (24), Expect = 0.045
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 398 catcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
           |||||||| |||||||||  |||||||| |||||||||||
Sbjct: 682 catcatcatcatcgtcgtcgtcatcatcgtcgtcatcgtc 643



to top

>gb|AC110820.4| Mus musculus BAC clone RP23-273L3 from 15, complete sequence
          Length = 168415

 Score = 48.1 bits (24), Expect = 0.045
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 398   catcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
             |||||||| |||||||||  |||||||| |||||||||||
Sbjct: 25439 catcatcatcatcgtcgtcgtcatcatcatcgtcatcgtc 25400



to top

>dbj|AK142380.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
           library, clone:D430028F24 product:cation channel, sperm
           associated 2, full insert sequence
          Length = 2130

 Score = 48.1 bits (24), Expect = 0.045
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 398 catcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
           |||||||| |||||||||  |||||||| |||||||||||
Sbjct: 550 catcatcatcatcgtcgtcgtcatcatcgtcgtcatcgtc 511



to top

>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12
          Length = 299350

 Score = 48.1 bits (24), Expect = 0.045
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 410    cgtcgtgctcatcatcctcgtcatcgtctacg 441
              |||| ||||||||||||||||| |||||||||
Sbjct: 193710 cgtcctgctcatcatcctcgtcgtcgtctacg 193679



to top

>ref|NM_153075.1| Mus musculus cation channel, sperm associated 2 (Catsper2), mRNA
 gb|AF411816.1|AF411816 Mus musculus putative ion channel protein CATSPER2 mRNA, complete cds
          Length = 1986

 Score = 48.1 bits (24), Expect = 0.045
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 398  catcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
            |||||||| |||||||||  |||||||| |||||||||||
Sbjct: 1365 catcatcatcatcgtcgtcgtcatcatcgtcgtcatcgtc 1326



to top

>gb|AC154614.3| Mus musculus BAC clone RP23-255I2 from chromosome 14, complete sequence
          Length = 186187

 Score = 48.1 bits (24), Expect = 0.045
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 398   catcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
             |||||||| |||||||||  |||||||| |||||||||||
Sbjct: 67886 catcatcatcatcgtcgtcatcatcatcatcgtcatcgtc 67925



to top

>emb|AL845466.4| Mouse DNA sequence from clone RP23-433P19 on chromosome 2, complete
              sequence
          Length = 197839

 Score = 48.1 bits (24), Expect = 0.045
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 398    catcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
              |||||||| |||||||||  |||||||| |||||||||||
Sbjct: 104436 catcatcatcatcgtcgtcgtcatcatcgtcgtcatcgtc 104475



to top

>ref|XM_762139.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_113_10176_13586)
            partial mRNA
          Length = 3411

 Score = 48.1 bits (24), Expect = 0.045
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 398  catcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
            |||||||| |||||||||  |||||||| |||||||||||
Sbjct: 2176 catcatcatcatcgtcgtcgtcatcatcatcgtcatcgtc 2137



to top

>ref|NM_135399.2| Drosophila melanogaster Sema-1a CG18405-RB, transcript variant B
            (Sema-1a), mRNA
          Length = 4453

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 411  gtcgtgctcatcatcctcgtcatcgtc 437
            ||||||||||||||| |||||||||||
Sbjct: 4072 gtcgtgctcatcatcatcgtcatcgtc 4046



to top

>ref|NM_001069758.1| Oryza sativa (japonica cultivar-group) Os09g0425900 (Os09g0425900)
           mRNA, complete cds
          Length = 1216

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 176 cgacctctccccgattcagtctggatgctgcaagccacc 214
           ||||||||||||| |  |||| |||||||||||||||||
Sbjct: 591 cgacctctccccgctcgagtccggatgctgcaagccacc 629



to top

>ref|NM_001058464.1| Oryza sativa (japonica cultivar-group) Os03g0853200 (Os03g0853200)
           mRNA, complete cds
          Length = 965

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 192 cagtctggatgctgcaagccacc 214
           |||||||||||||||||||||||
Sbjct: 628 cagtctggatgctgcaagccacc 650



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 306 tggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcct 364
           |||||||||||||| || | | | |||||||||||||| || |||||||| ||| ||||
Sbjct: 736 tggagcaacgaccaacaaaagctctgcttccagtgcgattcatgcaaggcaggcttcct 794



to top

>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence
          Length = 23011544

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 411     gtcgtgctcatcatcctcgtcatcgtc 437
               ||||||||||||||| |||||||||||
Sbjct: 8666508 gtcgtgctcatcatcatcgtcatcgtc 8666482



to top

>gb|BT016475.1| Zea mays clone Contig308 mRNA sequence
          Length = 891

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 400 tcatcaacatcgtcgtgctcatcatcctcgtcatc 434
           |||||| ||||||| | ||||||||||||||||||
Sbjct: 200 tcatcatcatcgtcatcctcatcatcctcgtcatc 166



to top

>gb|AY224518.1| Oryza sativa (japonica cultivar-group) isolate 20462
           senescence-associated protein-like protein mRNA,
           complete cds
          Length = 831

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 176 cgacctctccccgattcagtctggatgctgcaagccacc 214
           ||||||||||||| |  |||| |||||||||||||||||
Sbjct: 489 cgacctctccccgctcgagtccggatgctgcaagccacc 527



to top

>ref|NM_164830.3| Drosophila melanogaster Sema-1a CG18405-RA, transcript variant A
            (Sema-1a), mRNA
          Length = 5310

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 411  gtcgtgctcatcatcctcgtcatcgtc 437
            ||||||||||||||| |||||||||||
Sbjct: 4390 gtcgtgctcatcatcatcgtcatcgtc 4364



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 192     cagtctggatgctgcaagccacc 214
               |||||||||||||||||||||||
Sbjct: 9778491 cagtctggatgctgcaagccacc 9778469



to top

>emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmid contig 9G6
          Length = 125561

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 407   catcgtcgtgctcatcatcctcgtcatcgtc 437
             |||||||||  ||||||||||||||||||||
Sbjct: 28215 catcgtcgtcatcatcatcctcgtcatcgtc 28245



to top

>gb|AC008331.7|AC008331 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone
             BACR02B16, complete sequence
          Length = 186938

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 411   gtcgtgctcatcatcctcgtcatcgtc 437
             ||||||||||||||| |||||||||||
Sbjct: 85201 gtcgtgctcatcatcatcgtcatcgtc 85175



to top

>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1063H10
          Length = 170453

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 192   cagtctggatgctgcaagccacc 214
             |||||||||||||||||||||||
Sbjct: 42423 cagtctggatgctgcaagccacc 42401



to top

>ref|XM_956213.1| Neurospora crassa OR74A hypothetical protein (NCU04150.1) partial
           mRNA
          Length = 975

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 407 catcgtcgtgctcatcatcctcgtcatcgtc 437
           |||||||||  ||||||||||||||||||||
Sbjct: 829 catcgtcgtcatcatcatcctcgtcatcgtc 799



to top

>dbj|AK109128.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-D07, full
           insert sequence
          Length = 970

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 192 cagtctggatgctgcaagccacc 214
           |||||||||||||||||||||||
Sbjct: 633 cagtctggatgctgcaagccacc 655



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 306 tggagcaacgaccagcagacgttgtgcttccagtgcgactcgtgcaaggctggcgtcct 364
           |||||||||||||| || | | | |||||||||||||| || |||||||| ||| ||||
Sbjct: 741 tggagcaacgaccaacaaaagctctgcttccagtgcgattcatgcaaggcaggcttcct 799



to top

>dbj|AK106158.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A07, full
           insert sequence
          Length = 1201

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 176 cgacctctccccgattcagtctggatgctgcaagccacc 214
           ||||||||||||| |  |||| |||||||||||||||||
Sbjct: 589 cgacctctccccgctcgagtccggatgctgcaagccacc 627



to top

>emb|BX828681.1|CNS0A2IF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL29ZF09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 922

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 190 ttcagtctggatgctgcaagccaccga 216
           ||||||||||||||||||| |||||||
Sbjct: 411 ttcagtctggatgctgcaaaccaccga 437



to top

>dbj|AK061801.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H10, full
           insert sequence
          Length = 1216

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 176 cgacctctccccgattcagtctggatgctgcaagccacc 214
           ||||||||||||| |  |||| |||||||||||||||||
Sbjct: 591 cgacctctccccgctcgagtccggatgctgcaagccacc 629



to top

>gb|AF082030.1|AF082030 Hemerocallis hybrid cultivar senescence-associated protein 5 (SA5)
           mRNA, complete cds
          Length = 1094

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 189 attcagtctggatgctgcaagcc 211
           |||||||||||||||||||||||
Sbjct: 569 attcagtctggatgctgcaagcc 591



to top

>gb|L26082.1|DRODSEM Drosophila melanogastor semaphorin-I (Dsema-I) mRNA, complete cds
          Length = 8024

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 411  gtcgtgctcatcatcctcgtcatcgtc 437
            ||||||||||||||| |||||||||||
Sbjct: 3095 gtcgtgctcatcatcatcgtcatcgtc 3069



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 411  gtcgtgctcatcatcctcgtcatcgtc 437
            ||||||||||||||| |||||||||||
Sbjct: 7107 gtcgtgctcatcatcatcgtcatcgtc 7081



to top

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 437     ctacgtcgccggctgcgccgcg 458
               ||||||||||||||||||||||
Sbjct: 1959565 ctacgtcgccggctgcgccgcg 1959544



to top

>dbj|AK236853.1| Sus scrofa mRNA, clone:PBL010025D01, expressed in periphral blood
            mononuclear cell
          Length = 1460

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 409  tcgtcgtgctcatcatcctcgtcatcgtc 437
            |||||||  ||||||||||||||||||||
Sbjct: 1202 tcgtcgtcgtcatcatcctcgtcatcgtc 1174



to top

>ref|XM_001173773.1| PREDICTED: Pan troglodytes potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 1,
           transcript variant 3 (KCNN1), mRNA
          Length = 2708

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 421 ctcatcatcctcgtcatcgtc 401



to top

>ref|XM_524155.2| PREDICTED: Pan troglodytes potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 1,
           transcript variant 4 (KCNN1), mRNA
          Length = 2771

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 493 ctcatcatcctcgtcatcgtc 473



to top

>ref|XM_001173749.1| PREDICTED: Pan troglodytes potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 1,
           transcript variant 1 (KCNN1), mRNA
          Length = 1849

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 493 ctcatcatcctcgtcatcgtc 473



to top

>ref|XM_001173769.1| PREDICTED: Pan troglodytes potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 1,
           transcript variant 2 (KCNN1), mRNA
          Length = 2780

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 493 ctcatcatcctcgtcatcgtc 473



to top

>ref|XM_001120155.1| PREDICTED: Apis mellifera similar to CG11966-PA (LOC724334),
           partial mRNA
          Length = 2516

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 413 ctcatcatcctcgtcatcgtc 433



to top

>ref|XM_001115129.1| PREDICTED: Macaca mulatta potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 1
           (KCNN1), mRNA
          Length = 1518

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 330 ctcatcatcctcgtcatcgtc 310



to top

>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 364     tggccggcatcaagaagagct 384
               |||||||||||||||||||||
Sbjct: 1131975 tggccggcatcaagaagagct 1131955



to top

>ref|NM_002248.3| Homo sapiens potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 1
           (KCNN1), mRNA
          Length = 2657

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 529 ctcatcatcctcgtcatcgtc 509



to top

>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 397     ccatcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
               ||||||||| ||||||| |  ||||| ||||||||||||||
Sbjct: 1658107 ccatcatcatcatcgtcctcgtcatcgtcctcgtcatcgtc 1658067



to top

>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence
          Length = 236455

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 401   catcaacatcgtcgtgctcatcatc 425
             ||||||||||||||||||| |||||
Sbjct: 71565 catcaacatcgtcgtgctcgtcatc 71589



to top

>gb|AC132118.3| Mus musculus BAC clone RP23-467C14 from chromosome 5, complete sequence
          Length = 175070

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 704    agggaaggtgttcttggatcg 724
              |||||||||||||||||||||
Sbjct: 141153 agggaaggtgttcttggatcg 141133



to top

>gb|AC162802.4| Mus musculus BAC clone RP23-363M4 from chromosome 5, complete sequence
          Length = 234206

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 704   agggaaggtgttcttggatcg 724
             |||||||||||||||||||||
Sbjct: 77740 agggaaggtgttcttggatcg 77720



to top

>gb|BC075037.2| Homo sapiens potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 1, mRNA
           (cDNA clone MGC:104011 IMAGE:30915422), complete cds
          Length = 1691

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 239 ctcatcatcctcgtcatcgtc 219



to top

>ref|XM_460054.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E18040g)
            partial mRNA
          Length = 1824

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 397  ccatcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
            ||||||||||| || |||| ||||||||| || ||||||||
Sbjct: 1607 ccatcatcaacctcttcgttctcatcatcgtcatcatcgtc 1567



to top

>ref|XM_756696.1| Ustilago maydis 521 hypothetical protein (UM05642.1) partial mRNA
          Length = 4404

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 426  ctcgtcatcgtctacgtcgcc 446
            |||||||||||||||||||||
Sbjct: 4327 ctcgtcatcgtctacgtcgcc 4347



to top

>ref|NM_001027854.1| Caenorhabditis elegans GRound-Like (grd related) family member
            (grl-25) (grl-25) mRNA, complete cds
          Length = 2394

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 407  catcgtcgtgctcatcatcctcgtc 431
            |||||||| ||||||||||||||||
Sbjct: 1199 catcgtcgagctcatcatcctcgtc 1223



to top

>emb|Z12018.1|CEZK638 Caenorhabditis elegans Cosmid ZK638, complete sequence
          Length = 1762

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 407 catcgtcgtgctcatcatcctcgtc 431
           |||||||| ||||||||||||||||
Sbjct: 284 catcgtcgagctcatcatcctcgtc 308



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 338      gtgcgactcgtgcaaggctggcgtcctgg 366
                |||||||||||||||||| ||||| ||||
Sbjct: 43178352 gtgcgactcgtgcaaggccggcgtgctgg 43178380



to top

>gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, complete sequence
          Length = 148824

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 417   ctcatcatcctcgtcatcgtc 437
             |||||||||||||||||||||
Sbjct: 19975 ctcatcatcctcgtcatcgtc 19955



to top

>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0020E09
          Length = 149195

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 338   gtgcgactcgtgcaaggctggcgtcctgg 366
             |||||||||||||||||| ||||| ||||
Sbjct: 65807 gtgcgactcgtgcaaggccggcgtgctgg 65835



to top

>dbj|AB198191.1| Homo sapiens KCNN1 mRNA for small-conductance calcium-activated
           potassium channel, complete cds
          Length = 1629

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 273 ctcatcatcctcgtcatcgtc 253



to top

>emb|Z26879.1|SCRPS8SFC S.cerevisiae genes for small subunit ribosomal protein S8, splicing
            factor, and chaperone
          Length = 7468

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 414  gtgctcatcatcctcgtcatc 434
            |||||||||||||||||||||
Sbjct: 2200 gtgctcatcatcctcgtcatc 2220



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 155     cgccgtcgtcttctacggccgcgac 179
               ||||| |||||||||||||||||||
Sbjct: 2974089 cgccgccgtcttctacggccgcgac 2974065



to top

>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
               hansenii
          Length = 2037969

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 397     ccatcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
               ||||||||||| || |||| ||||||||| || ||||||||
Sbjct: 1398620 ccatcatcaacctcttcgttctcatcatcgtcatcatcgtc 1398660



to top

>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 28    ctccgcggccgcgtcgccgaccccg 52
             ||||||||||||||||||| |||||
Sbjct: 62825 ctccgcggccgcgtcgccgtccccg 62849



to top

>ref|XM_569760.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNC05550) partial mRNA
          Length = 2268

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 397  ccatcatcaacatcgtcgtgctcatcatcctcgtcatcgtc 437
            ||||||||| ||||||| |  ||||| ||||||||||||||
Sbjct: 1958 ccatcatcatcatcgtcctcgtcatcgtcctcgtcatcgtc 1918



to top

>gb|U69883.2|HSU69883 Homo sapiens small-conductance, calcium-activated potassium channel
           SK1 (KCNN1) mRNA, complete cds
          Length = 2535

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 539 ctcatcatcctcgtcatcgtc 519



to top

>gb|DQ331554.1| Synthetic construct Saccharomyces cerevisiae clone FLH202157.01X AAR2
            gene, complete sequence
          Length = 1068

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 414  gtgctcatcatcctcgtcatc 434
            |||||||||||||||||||||
Sbjct: 1026 gtgctcatcatcctcgtcatc 1006



to top

>emb|Z35835.1|SCYBL074C S.cerevisiae chromosome II reading frame ORF YBL074c
          Length = 2077

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 414 gtgctcatcatcctcgtcatc 434
           |||||||||||||||||||||
Sbjct: 316 gtgctcatcatcctcgtcatc 336



to top

>gb|AF131940.1|HSKCNN03 Homo sapiens small-conductance calcium-activated potassium channel
           1 (KCNN1) gene, exon 3
          Length = 1481

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ctcatcatcctcgtcatcgtc 437
           |||||||||||||||||||||
Sbjct: 731 ctcatcatcctcgtcatcgtc 711



to top

>dbj|D90455.1|YSCAAR2 Saccharomyces cerevisiae AAR2 gene, complete cds
          Length = 2652

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 414  gtgctcatcatcctcgtcatc 434
            |||||||||||||||||||||
Sbjct: 1722 gtgctcatcatcctcgtcatc 1702



to top

>gb|M36115.1|YSCSSA3A S.cerevisiae heat shock protein gene (SSA3)
          Length = 1220

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 414 gtgctcatcatcctcgtcatc 434
           |||||||||||||||||||||
Sbjct: 800 gtgctcatcatcctcgtcatc 780


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 92,060,485
Number of extensions: 4813524
Number of successful extensions: 102495
Number of sequences better than 10.0: 85
Number of HSP's gapped: 102480
Number of HSP's successfully gapped: 109
Length of query: 743
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 721
Effective length of database: 18,508,616,841
Effective search space: 13344712742361
Effective search space used: 13344712742361
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top